tomoto 0.1.0
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- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE.txt +22 -0
- data/README.md +123 -0
- data/ext/tomoto/ext.cpp +245 -0
- data/ext/tomoto/extconf.rb +28 -0
- data/lib/tomoto.rb +12 -0
- data/lib/tomoto/ct.rb +11 -0
- data/lib/tomoto/hdp.rb +11 -0
- data/lib/tomoto/lda.rb +67 -0
- data/lib/tomoto/version.rb +3 -0
- data/vendor/EigenRand/EigenRand/Core.h +1139 -0
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
- data/vendor/EigenRand/EigenRand/EigenRand +19 -0
- data/vendor/EigenRand/EigenRand/Macro.h +24 -0
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
- data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
- data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
- data/vendor/EigenRand/EigenRand/doc.h +220 -0
- data/vendor/EigenRand/LICENSE +21 -0
- data/vendor/EigenRand/README.md +288 -0
- data/vendor/eigen/COPYING.BSD +26 -0
- data/vendor/eigen/COPYING.GPL +674 -0
- data/vendor/eigen/COPYING.LGPL +502 -0
- data/vendor/eigen/COPYING.MINPACK +52 -0
- data/vendor/eigen/COPYING.MPL2 +373 -0
- data/vendor/eigen/COPYING.README +18 -0
- data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
- data/vendor/eigen/Eigen/Cholesky +46 -0
- data/vendor/eigen/Eigen/CholmodSupport +48 -0
- data/vendor/eigen/Eigen/Core +537 -0
- data/vendor/eigen/Eigen/Dense +7 -0
- data/vendor/eigen/Eigen/Eigen +2 -0
- data/vendor/eigen/Eigen/Eigenvalues +61 -0
- data/vendor/eigen/Eigen/Geometry +62 -0
- data/vendor/eigen/Eigen/Householder +30 -0
- data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/eigen/Eigen/Jacobi +33 -0
- data/vendor/eigen/Eigen/LU +50 -0
- data/vendor/eigen/Eigen/MetisSupport +35 -0
- data/vendor/eigen/Eigen/OrderingMethods +73 -0
- data/vendor/eigen/Eigen/PaStiXSupport +48 -0
- data/vendor/eigen/Eigen/PardisoSupport +35 -0
- data/vendor/eigen/Eigen/QR +51 -0
- data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
- data/vendor/eigen/Eigen/SPQRSupport +34 -0
- data/vendor/eigen/Eigen/SVD +51 -0
- data/vendor/eigen/Eigen/Sparse +36 -0
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- data/vendor/eigen/Eigen/SparseCore +69 -0
- data/vendor/eigen/Eigen/SparseLU +46 -0
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- data/vendor/eigen/Eigen/SuperLUSupport +64 -0
- data/vendor/eigen/Eigen/UmfPackSupport +40 -0
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
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- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
- data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
- data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
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- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
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- data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
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- data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
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- data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
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- data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
- data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
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- data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
- data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
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- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
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- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
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- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +745 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +126 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/eigen/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
- data/vendor/eigen/Eigen/src/misc/Image.h +82 -0
- data/vendor/eigen/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
- data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
- data/vendor/eigen/Eigen/src/misc/lapacke.h +16291 -0
- data/vendor/eigen/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +332 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +552 -0
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +1058 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +163 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +85 -0
- data/vendor/eigen/README.md +3 -0
- data/vendor/eigen/bench/README.txt +55 -0
- data/vendor/eigen/bench/btl/COPYING +340 -0
- data/vendor/eigen/bench/btl/README +154 -0
- data/vendor/eigen/bench/tensors/README +21 -0
- data/vendor/eigen/blas/README.txt +6 -0
- data/vendor/eigen/demos/mandelbrot/README +10 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +9 -0
- data/vendor/eigen/demos/opengl/README +13 -0
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +1760 -0
- data/vendor/eigen/unsupported/README.txt +50 -0
- data/vendor/tomotopy/LICENSE +21 -0
- data/vendor/tomotopy/README.kr.rst +375 -0
- data/vendor/tomotopy/README.rst +382 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
- data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
- data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
- data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +374 -0
- data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
- data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.cpp +15 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
- data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
- data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
- data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
- data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
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- data/vendor/tomotopy/src/TopicModel/LDA.h +144 -0
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
- data/vendor/tomotopy/src/TopicModel/LLDA.h +45 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +203 -0
- data/vendor/tomotopy/src/TopicModel/MGLDA.h +63 -0
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- data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
- data/vendor/tomotopy/src/TopicModel/PLDA.h +17 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +214 -0
- data/vendor/tomotopy/src/TopicModel/SLDA.h +54 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +456 -0
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +692 -0
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +169 -0
- data/vendor/tomotopy/src/Utils/Dictionary.h +80 -0
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +181 -0
- data/vendor/tomotopy/src/Utils/LBFGS.h +202 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h +120 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h +122 -0
- data/vendor/tomotopy/src/Utils/LBFGS/Param.h +213 -0
- data/vendor/tomotopy/src/Utils/LUT.hpp +82 -0
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
- data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
- data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
- data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
- data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
- data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
- data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
- data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
- data/vendor/tomotopy/src/Utils/exception.h +28 -0
- data/vendor/tomotopy/src/Utils/math.h +281 -0
- data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
- data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
- data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
- data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
- data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
- data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
- data/vendor/tomotopy/src/Utils/text.hpp +49 -0
- data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
- metadata +531 -0
@@ -0,0 +1,653 @@
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
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// Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_COLPIVOTINGHOUSEHOLDERQR_H
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#define EIGEN_COLPIVOTINGHOUSEHOLDERQR_H
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namespace Eigen {
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namespace internal {
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template<typename _MatrixType> struct traits<ColPivHouseholderQR<_MatrixType> >
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: traits<_MatrixType>
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{
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enum { Flags = 0 };
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};
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} // end namespace internal
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/** \ingroup QR_Module
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*
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* \class ColPivHouseholderQR
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*
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* \brief Householder rank-revealing QR decomposition of a matrix with column-pivoting
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*
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* \tparam _MatrixType the type of the matrix of which we are computing the QR decomposition
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*
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* This class performs a rank-revealing QR decomposition of a matrix \b A into matrices \b P, \b Q and \b R
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* such that
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* \f[
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* \mathbf{A} \, \mathbf{P} = \mathbf{Q} \, \mathbf{R}
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* \f]
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* by using Householder transformations. Here, \b P is a permutation matrix, \b Q a unitary matrix and \b R an
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* upper triangular matrix.
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*
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* This decomposition performs column pivoting in order to be rank-revealing and improve
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* numerical stability. It is slower than HouseholderQR, and faster than FullPivHouseholderQR.
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*
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* This class supports the \link InplaceDecomposition inplace decomposition \endlink mechanism.
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*
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* \sa MatrixBase::colPivHouseholderQr()
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*/
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template<typename _MatrixType> class ColPivHouseholderQR
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{
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public:
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typedef _MatrixType MatrixType;
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enum {
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RowsAtCompileTime = MatrixType::RowsAtCompileTime,
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ColsAtCompileTime = MatrixType::ColsAtCompileTime,
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MaxRowsAtCompileTime = MatrixType::MaxRowsAtCompileTime,
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MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime
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};
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typedef typename MatrixType::Scalar Scalar;
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typedef typename MatrixType::RealScalar RealScalar;
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// FIXME should be int
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typedef typename MatrixType::StorageIndex StorageIndex;
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typedef typename internal::plain_diag_type<MatrixType>::type HCoeffsType;
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typedef PermutationMatrix<ColsAtCompileTime, MaxColsAtCompileTime> PermutationType;
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typedef typename internal::plain_row_type<MatrixType, Index>::type IntRowVectorType;
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typedef typename internal::plain_row_type<MatrixType>::type RowVectorType;
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typedef typename internal::plain_row_type<MatrixType, RealScalar>::type RealRowVectorType;
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typedef HouseholderSequence<MatrixType,typename internal::remove_all<typename HCoeffsType::ConjugateReturnType>::type> HouseholderSequenceType;
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typedef typename MatrixType::PlainObject PlainObject;
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private:
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typedef typename PermutationType::StorageIndex PermIndexType;
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public:
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/**
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* \brief Default Constructor.
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*
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* The default constructor is useful in cases in which the user intends to
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* perform decompositions via ColPivHouseholderQR::compute(const MatrixType&).
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*/
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ColPivHouseholderQR()
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: m_qr(),
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m_hCoeffs(),
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m_colsPermutation(),
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m_colsTranspositions(),
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m_temp(),
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m_colNormsUpdated(),
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m_colNormsDirect(),
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m_isInitialized(false),
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m_usePrescribedThreshold(false) {}
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/** \brief Default Constructor with memory preallocation
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*
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* Like the default constructor but with preallocation of the internal data
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* according to the specified problem \a size.
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* \sa ColPivHouseholderQR()
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*/
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ColPivHouseholderQR(Index rows, Index cols)
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: m_qr(rows, cols),
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m_hCoeffs((std::min)(rows,cols)),
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m_colsPermutation(PermIndexType(cols)),
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m_colsTranspositions(cols),
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m_temp(cols),
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m_colNormsUpdated(cols),
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m_colNormsDirect(cols),
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m_isInitialized(false),
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m_usePrescribedThreshold(false) {}
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/** \brief Constructs a QR factorization from a given matrix
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*
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* This constructor computes the QR factorization of the matrix \a matrix by calling
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* the method compute(). It is a short cut for:
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*
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* \code
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* ColPivHouseholderQR<MatrixType> qr(matrix.rows(), matrix.cols());
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* qr.compute(matrix);
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* \endcode
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*
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* \sa compute()
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*/
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template<typename InputType>
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explicit ColPivHouseholderQR(const EigenBase<InputType>& matrix)
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: m_qr(matrix.rows(), matrix.cols()),
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m_hCoeffs((std::min)(matrix.rows(),matrix.cols())),
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m_colsPermutation(PermIndexType(matrix.cols())),
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m_colsTranspositions(matrix.cols()),
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m_temp(matrix.cols()),
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m_colNormsUpdated(matrix.cols()),
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m_colNormsDirect(matrix.cols()),
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m_isInitialized(false),
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m_usePrescribedThreshold(false)
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{
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compute(matrix.derived());
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}
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/** \brief Constructs a QR factorization from a given matrix
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*
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* This overloaded constructor is provided for \link InplaceDecomposition inplace decomposition \endlink when \c MatrixType is a Eigen::Ref.
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*
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* \sa ColPivHouseholderQR(const EigenBase&)
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*/
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template<typename InputType>
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explicit ColPivHouseholderQR(EigenBase<InputType>& matrix)
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: m_qr(matrix.derived()),
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m_hCoeffs((std::min)(matrix.rows(),matrix.cols())),
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m_colsPermutation(PermIndexType(matrix.cols())),
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m_colsTranspositions(matrix.cols()),
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m_temp(matrix.cols()),
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m_colNormsUpdated(matrix.cols()),
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m_colNormsDirect(matrix.cols()),
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m_isInitialized(false),
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m_usePrescribedThreshold(false)
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{
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computeInPlace();
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}
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/** This method finds a solution x to the equation Ax=b, where A is the matrix of which
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* *this is the QR decomposition, if any exists.
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*
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* \param b the right-hand-side of the equation to solve.
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*
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* \returns a solution.
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*
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* \note_about_checking_solutions
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*
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* \note_about_arbitrary_choice_of_solution
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*
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* Example: \include ColPivHouseholderQR_solve.cpp
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* Output: \verbinclude ColPivHouseholderQR_solve.out
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*/
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template<typename Rhs>
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inline const Solve<ColPivHouseholderQR, Rhs>
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solve(const MatrixBase<Rhs>& b) const
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{
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eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
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return Solve<ColPivHouseholderQR, Rhs>(*this, b.derived());
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}
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HouseholderSequenceType householderQ() const;
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HouseholderSequenceType matrixQ() const
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{
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return householderQ();
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}
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/** \returns a reference to the matrix where the Householder QR decomposition is stored
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*/
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const MatrixType& matrixQR() const
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{
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eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
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return m_qr;
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}
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/** \returns a reference to the matrix where the result Householder QR is stored
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* \warning The strict lower part of this matrix contains internal values.
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* Only the upper triangular part should be referenced. To get it, use
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* \code matrixR().template triangularView<Upper>() \endcode
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* For rank-deficient matrices, use
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* \code
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* matrixR().topLeftCorner(rank(), rank()).template triangularView<Upper>()
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* \endcode
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*/
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const MatrixType& matrixR() const
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{
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eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
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return m_qr;
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}
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template<typename InputType>
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ColPivHouseholderQR& compute(const EigenBase<InputType>& matrix);
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/** \returns a const reference to the column permutation matrix */
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const PermutationType& colsPermutation() const
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{
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eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
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return m_colsPermutation;
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}
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/** \returns the absolute value of the determinant of the matrix of which
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* *this is the QR decomposition. It has only linear complexity
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* (that is, O(n) where n is the dimension of the square matrix)
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* as the QR decomposition has already been computed.
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*
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* \note This is only for square matrices.
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*
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* \warning a determinant can be very big or small, so for matrices
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* of large enough dimension, there is a risk of overflow/underflow.
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* One way to work around that is to use logAbsDeterminant() instead.
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*
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* \sa logAbsDeterminant(), MatrixBase::determinant()
|
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+
*/
|
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+
typename MatrixType::RealScalar absDeterminant() const;
|
234
|
+
|
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+
/** \returns the natural log of the absolute value of the determinant of the matrix of which
|
236
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+
* *this is the QR decomposition. It has only linear complexity
|
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|
+
* (that is, O(n) where n is the dimension of the square matrix)
|
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|
+
* as the QR decomposition has already been computed.
|
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+
*
|
240
|
+
* \note This is only for square matrices.
|
241
|
+
*
|
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|
+
* \note This method is useful to work around the risk of overflow/underflow that's inherent
|
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+
* to determinant computation.
|
244
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+
*
|
245
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+
* \sa absDeterminant(), MatrixBase::determinant()
|
246
|
+
*/
|
247
|
+
typename MatrixType::RealScalar logAbsDeterminant() const;
|
248
|
+
|
249
|
+
/** \returns the rank of the matrix of which *this is the QR decomposition.
|
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+
*
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+
* \note This method has to determine which pivots should be considered nonzero.
|
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+
* For that, it uses the threshold value that you can control by calling
|
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+
* setThreshold(const RealScalar&).
|
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|
+
*/
|
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+
inline Index rank() const
|
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|
+
{
|
257
|
+
using std::abs;
|
258
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
259
|
+
RealScalar premultiplied_threshold = abs(m_maxpivot) * threshold();
|
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+
Index result = 0;
|
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+
for(Index i = 0; i < m_nonzero_pivots; ++i)
|
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+
result += (abs(m_qr.coeff(i,i)) > premultiplied_threshold);
|
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|
+
return result;
|
264
|
+
}
|
265
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+
|
266
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+
/** \returns the dimension of the kernel of the matrix of which *this is the QR decomposition.
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|
+
*
|
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|
+
* \note This method has to determine which pivots should be considered nonzero.
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+
* For that, it uses the threshold value that you can control by calling
|
270
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+
* setThreshold(const RealScalar&).
|
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+
*/
|
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+
inline Index dimensionOfKernel() const
|
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+
{
|
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|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
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|
+
return cols() - rank();
|
276
|
+
}
|
277
|
+
|
278
|
+
/** \returns true if the matrix of which *this is the QR decomposition represents an injective
|
279
|
+
* linear map, i.e. has trivial kernel; false otherwise.
|
280
|
+
*
|
281
|
+
* \note This method has to determine which pivots should be considered nonzero.
|
282
|
+
* For that, it uses the threshold value that you can control by calling
|
283
|
+
* setThreshold(const RealScalar&).
|
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|
+
*/
|
285
|
+
inline bool isInjective() const
|
286
|
+
{
|
287
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
288
|
+
return rank() == cols();
|
289
|
+
}
|
290
|
+
|
291
|
+
/** \returns true if the matrix of which *this is the QR decomposition represents a surjective
|
292
|
+
* linear map; false otherwise.
|
293
|
+
*
|
294
|
+
* \note This method has to determine which pivots should be considered nonzero.
|
295
|
+
* For that, it uses the threshold value that you can control by calling
|
296
|
+
* setThreshold(const RealScalar&).
|
297
|
+
*/
|
298
|
+
inline bool isSurjective() const
|
299
|
+
{
|
300
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
301
|
+
return rank() == rows();
|
302
|
+
}
|
303
|
+
|
304
|
+
/** \returns true if the matrix of which *this is the QR decomposition is invertible.
|
305
|
+
*
|
306
|
+
* \note This method has to determine which pivots should be considered nonzero.
|
307
|
+
* For that, it uses the threshold value that you can control by calling
|
308
|
+
* setThreshold(const RealScalar&).
|
309
|
+
*/
|
310
|
+
inline bool isInvertible() const
|
311
|
+
{
|
312
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
313
|
+
return isInjective() && isSurjective();
|
314
|
+
}
|
315
|
+
|
316
|
+
/** \returns the inverse of the matrix of which *this is the QR decomposition.
|
317
|
+
*
|
318
|
+
* \note If this matrix is not invertible, the returned matrix has undefined coefficients.
|
319
|
+
* Use isInvertible() to first determine whether this matrix is invertible.
|
320
|
+
*/
|
321
|
+
inline const Inverse<ColPivHouseholderQR> inverse() const
|
322
|
+
{
|
323
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
324
|
+
return Inverse<ColPivHouseholderQR>(*this);
|
325
|
+
}
|
326
|
+
|
327
|
+
inline Index rows() const { return m_qr.rows(); }
|
328
|
+
inline Index cols() const { return m_qr.cols(); }
|
329
|
+
|
330
|
+
/** \returns a const reference to the vector of Householder coefficients used to represent the factor \c Q.
|
331
|
+
*
|
332
|
+
* For advanced uses only.
|
333
|
+
*/
|
334
|
+
const HCoeffsType& hCoeffs() const { return m_hCoeffs; }
|
335
|
+
|
336
|
+
/** Allows to prescribe a threshold to be used by certain methods, such as rank(),
|
337
|
+
* who need to determine when pivots are to be considered nonzero. This is not used for the
|
338
|
+
* QR decomposition itself.
|
339
|
+
*
|
340
|
+
* When it needs to get the threshold value, Eigen calls threshold(). By default, this
|
341
|
+
* uses a formula to automatically determine a reasonable threshold.
|
342
|
+
* Once you have called the present method setThreshold(const RealScalar&),
|
343
|
+
* your value is used instead.
|
344
|
+
*
|
345
|
+
* \param threshold The new value to use as the threshold.
|
346
|
+
*
|
347
|
+
* A pivot will be considered nonzero if its absolute value is strictly greater than
|
348
|
+
* \f$ \vert pivot \vert \leqslant threshold \times \vert maxpivot \vert \f$
|
349
|
+
* where maxpivot is the biggest pivot.
|
350
|
+
*
|
351
|
+
* If you want to come back to the default behavior, call setThreshold(Default_t)
|
352
|
+
*/
|
353
|
+
ColPivHouseholderQR& setThreshold(const RealScalar& threshold)
|
354
|
+
{
|
355
|
+
m_usePrescribedThreshold = true;
|
356
|
+
m_prescribedThreshold = threshold;
|
357
|
+
return *this;
|
358
|
+
}
|
359
|
+
|
360
|
+
/** Allows to come back to the default behavior, letting Eigen use its default formula for
|
361
|
+
* determining the threshold.
|
362
|
+
*
|
363
|
+
* You should pass the special object Eigen::Default as parameter here.
|
364
|
+
* \code qr.setThreshold(Eigen::Default); \endcode
|
365
|
+
*
|
366
|
+
* See the documentation of setThreshold(const RealScalar&).
|
367
|
+
*/
|
368
|
+
ColPivHouseholderQR& setThreshold(Default_t)
|
369
|
+
{
|
370
|
+
m_usePrescribedThreshold = false;
|
371
|
+
return *this;
|
372
|
+
}
|
373
|
+
|
374
|
+
/** Returns the threshold that will be used by certain methods such as rank().
|
375
|
+
*
|
376
|
+
* See the documentation of setThreshold(const RealScalar&).
|
377
|
+
*/
|
378
|
+
RealScalar threshold() const
|
379
|
+
{
|
380
|
+
eigen_assert(m_isInitialized || m_usePrescribedThreshold);
|
381
|
+
return m_usePrescribedThreshold ? m_prescribedThreshold
|
382
|
+
// this formula comes from experimenting (see "LU precision tuning" thread on the list)
|
383
|
+
// and turns out to be identical to Higham's formula used already in LDLt.
|
384
|
+
: NumTraits<Scalar>::epsilon() * RealScalar(m_qr.diagonalSize());
|
385
|
+
}
|
386
|
+
|
387
|
+
/** \returns the number of nonzero pivots in the QR decomposition.
|
388
|
+
* Here nonzero is meant in the exact sense, not in a fuzzy sense.
|
389
|
+
* So that notion isn't really intrinsically interesting, but it is
|
390
|
+
* still useful when implementing algorithms.
|
391
|
+
*
|
392
|
+
* \sa rank()
|
393
|
+
*/
|
394
|
+
inline Index nonzeroPivots() const
|
395
|
+
{
|
396
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
397
|
+
return m_nonzero_pivots;
|
398
|
+
}
|
399
|
+
|
400
|
+
/** \returns the absolute value of the biggest pivot, i.e. the biggest
|
401
|
+
* diagonal coefficient of R.
|
402
|
+
*/
|
403
|
+
RealScalar maxPivot() const { return m_maxpivot; }
|
404
|
+
|
405
|
+
/** \brief Reports whether the QR factorization was succesful.
|
406
|
+
*
|
407
|
+
* \note This function always returns \c Success. It is provided for compatibility
|
408
|
+
* with other factorization routines.
|
409
|
+
* \returns \c Success
|
410
|
+
*/
|
411
|
+
ComputationInfo info() const
|
412
|
+
{
|
413
|
+
eigen_assert(m_isInitialized && "Decomposition is not initialized.");
|
414
|
+
return Success;
|
415
|
+
}
|
416
|
+
|
417
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
418
|
+
template<typename RhsType, typename DstType>
|
419
|
+
EIGEN_DEVICE_FUNC
|
420
|
+
void _solve_impl(const RhsType &rhs, DstType &dst) const;
|
421
|
+
#endif
|
422
|
+
|
423
|
+
protected:
|
424
|
+
|
425
|
+
friend class CompleteOrthogonalDecomposition<MatrixType>;
|
426
|
+
|
427
|
+
static void check_template_parameters()
|
428
|
+
{
|
429
|
+
EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
|
430
|
+
}
|
431
|
+
|
432
|
+
void computeInPlace();
|
433
|
+
|
434
|
+
MatrixType m_qr;
|
435
|
+
HCoeffsType m_hCoeffs;
|
436
|
+
PermutationType m_colsPermutation;
|
437
|
+
IntRowVectorType m_colsTranspositions;
|
438
|
+
RowVectorType m_temp;
|
439
|
+
RealRowVectorType m_colNormsUpdated;
|
440
|
+
RealRowVectorType m_colNormsDirect;
|
441
|
+
bool m_isInitialized, m_usePrescribedThreshold;
|
442
|
+
RealScalar m_prescribedThreshold, m_maxpivot;
|
443
|
+
Index m_nonzero_pivots;
|
444
|
+
Index m_det_pq;
|
445
|
+
};
|
446
|
+
|
447
|
+
template<typename MatrixType>
|
448
|
+
typename MatrixType::RealScalar ColPivHouseholderQR<MatrixType>::absDeterminant() const
|
449
|
+
{
|
450
|
+
using std::abs;
|
451
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
452
|
+
eigen_assert(m_qr.rows() == m_qr.cols() && "You can't take the determinant of a non-square matrix!");
|
453
|
+
return abs(m_qr.diagonal().prod());
|
454
|
+
}
|
455
|
+
|
456
|
+
template<typename MatrixType>
|
457
|
+
typename MatrixType::RealScalar ColPivHouseholderQR<MatrixType>::logAbsDeterminant() const
|
458
|
+
{
|
459
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
460
|
+
eigen_assert(m_qr.rows() == m_qr.cols() && "You can't take the determinant of a non-square matrix!");
|
461
|
+
return m_qr.diagonal().cwiseAbs().array().log().sum();
|
462
|
+
}
|
463
|
+
|
464
|
+
/** Performs the QR factorization of the given matrix \a matrix. The result of
|
465
|
+
* the factorization is stored into \c *this, and a reference to \c *this
|
466
|
+
* is returned.
|
467
|
+
*
|
468
|
+
* \sa class ColPivHouseholderQR, ColPivHouseholderQR(const MatrixType&)
|
469
|
+
*/
|
470
|
+
template<typename MatrixType>
|
471
|
+
template<typename InputType>
|
472
|
+
ColPivHouseholderQR<MatrixType>& ColPivHouseholderQR<MatrixType>::compute(const EigenBase<InputType>& matrix)
|
473
|
+
{
|
474
|
+
m_qr = matrix.derived();
|
475
|
+
computeInPlace();
|
476
|
+
return *this;
|
477
|
+
}
|
478
|
+
|
479
|
+
template<typename MatrixType>
|
480
|
+
void ColPivHouseholderQR<MatrixType>::computeInPlace()
|
481
|
+
{
|
482
|
+
check_template_parameters();
|
483
|
+
|
484
|
+
// the column permutation is stored as int indices, so just to be sure:
|
485
|
+
eigen_assert(m_qr.cols()<=NumTraits<int>::highest());
|
486
|
+
|
487
|
+
using std::abs;
|
488
|
+
|
489
|
+
Index rows = m_qr.rows();
|
490
|
+
Index cols = m_qr.cols();
|
491
|
+
Index size = m_qr.diagonalSize();
|
492
|
+
|
493
|
+
m_hCoeffs.resize(size);
|
494
|
+
|
495
|
+
m_temp.resize(cols);
|
496
|
+
|
497
|
+
m_colsTranspositions.resize(m_qr.cols());
|
498
|
+
Index number_of_transpositions = 0;
|
499
|
+
|
500
|
+
m_colNormsUpdated.resize(cols);
|
501
|
+
m_colNormsDirect.resize(cols);
|
502
|
+
for (Index k = 0; k < cols; ++k) {
|
503
|
+
// colNormsDirect(k) caches the most recent directly computed norm of
|
504
|
+
// column k.
|
505
|
+
m_colNormsDirect.coeffRef(k) = m_qr.col(k).norm();
|
506
|
+
m_colNormsUpdated.coeffRef(k) = m_colNormsDirect.coeffRef(k);
|
507
|
+
}
|
508
|
+
|
509
|
+
RealScalar threshold_helper = numext::abs2<RealScalar>(m_colNormsUpdated.maxCoeff() * NumTraits<RealScalar>::epsilon()) / RealScalar(rows);
|
510
|
+
RealScalar norm_downdate_threshold = numext::sqrt(NumTraits<RealScalar>::epsilon());
|
511
|
+
|
512
|
+
m_nonzero_pivots = size; // the generic case is that in which all pivots are nonzero (invertible case)
|
513
|
+
m_maxpivot = RealScalar(0);
|
514
|
+
|
515
|
+
for(Index k = 0; k < size; ++k)
|
516
|
+
{
|
517
|
+
// first, we look up in our table m_colNormsUpdated which column has the biggest norm
|
518
|
+
Index biggest_col_index;
|
519
|
+
RealScalar biggest_col_sq_norm = numext::abs2(m_colNormsUpdated.tail(cols-k).maxCoeff(&biggest_col_index));
|
520
|
+
biggest_col_index += k;
|
521
|
+
|
522
|
+
// Track the number of meaningful pivots but do not stop the decomposition to make
|
523
|
+
// sure that the initial matrix is properly reproduced. See bug 941.
|
524
|
+
if(m_nonzero_pivots==size && biggest_col_sq_norm < threshold_helper * RealScalar(rows-k))
|
525
|
+
m_nonzero_pivots = k;
|
526
|
+
|
527
|
+
// apply the transposition to the columns
|
528
|
+
m_colsTranspositions.coeffRef(k) = biggest_col_index;
|
529
|
+
if(k != biggest_col_index) {
|
530
|
+
m_qr.col(k).swap(m_qr.col(biggest_col_index));
|
531
|
+
std::swap(m_colNormsUpdated.coeffRef(k), m_colNormsUpdated.coeffRef(biggest_col_index));
|
532
|
+
std::swap(m_colNormsDirect.coeffRef(k), m_colNormsDirect.coeffRef(biggest_col_index));
|
533
|
+
++number_of_transpositions;
|
534
|
+
}
|
535
|
+
|
536
|
+
// generate the householder vector, store it below the diagonal
|
537
|
+
RealScalar beta;
|
538
|
+
m_qr.col(k).tail(rows-k).makeHouseholderInPlace(m_hCoeffs.coeffRef(k), beta);
|
539
|
+
|
540
|
+
// apply the householder transformation to the diagonal coefficient
|
541
|
+
m_qr.coeffRef(k,k) = beta;
|
542
|
+
|
543
|
+
// remember the maximum absolute value of diagonal coefficients
|
544
|
+
if(abs(beta) > m_maxpivot) m_maxpivot = abs(beta);
|
545
|
+
|
546
|
+
// apply the householder transformation
|
547
|
+
m_qr.bottomRightCorner(rows-k, cols-k-1)
|
548
|
+
.applyHouseholderOnTheLeft(m_qr.col(k).tail(rows-k-1), m_hCoeffs.coeffRef(k), &m_temp.coeffRef(k+1));
|
549
|
+
|
550
|
+
// update our table of norms of the columns
|
551
|
+
for (Index j = k + 1; j < cols; ++j) {
|
552
|
+
// The following implements the stable norm downgrade step discussed in
|
553
|
+
// http://www.netlib.org/lapack/lawnspdf/lawn176.pdf
|
554
|
+
// and used in LAPACK routines xGEQPF and xGEQP3.
|
555
|
+
// See lines 278-297 in http://www.netlib.org/lapack/explore-html/dc/df4/sgeqpf_8f_source.html
|
556
|
+
if (m_colNormsUpdated.coeffRef(j) != RealScalar(0)) {
|
557
|
+
RealScalar temp = abs(m_qr.coeffRef(k, j)) / m_colNormsUpdated.coeffRef(j);
|
558
|
+
temp = (RealScalar(1) + temp) * (RealScalar(1) - temp);
|
559
|
+
temp = temp < RealScalar(0) ? RealScalar(0) : temp;
|
560
|
+
RealScalar temp2 = temp * numext::abs2<RealScalar>(m_colNormsUpdated.coeffRef(j) /
|
561
|
+
m_colNormsDirect.coeffRef(j));
|
562
|
+
if (temp2 <= norm_downdate_threshold) {
|
563
|
+
// The updated norm has become too inaccurate so re-compute the column
|
564
|
+
// norm directly.
|
565
|
+
m_colNormsDirect.coeffRef(j) = m_qr.col(j).tail(rows - k - 1).norm();
|
566
|
+
m_colNormsUpdated.coeffRef(j) = m_colNormsDirect.coeffRef(j);
|
567
|
+
} else {
|
568
|
+
m_colNormsUpdated.coeffRef(j) *= numext::sqrt(temp);
|
569
|
+
}
|
570
|
+
}
|
571
|
+
}
|
572
|
+
}
|
573
|
+
|
574
|
+
m_colsPermutation.setIdentity(PermIndexType(cols));
|
575
|
+
for(PermIndexType k = 0; k < size/*m_nonzero_pivots*/; ++k)
|
576
|
+
m_colsPermutation.applyTranspositionOnTheRight(k, PermIndexType(m_colsTranspositions.coeff(k)));
|
577
|
+
|
578
|
+
m_det_pq = (number_of_transpositions%2) ? -1 : 1;
|
579
|
+
m_isInitialized = true;
|
580
|
+
}
|
581
|
+
|
582
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
583
|
+
template<typename _MatrixType>
|
584
|
+
template<typename RhsType, typename DstType>
|
585
|
+
void ColPivHouseholderQR<_MatrixType>::_solve_impl(const RhsType &rhs, DstType &dst) const
|
586
|
+
{
|
587
|
+
eigen_assert(rhs.rows() == rows());
|
588
|
+
|
589
|
+
const Index nonzero_pivots = nonzeroPivots();
|
590
|
+
|
591
|
+
if(nonzero_pivots == 0)
|
592
|
+
{
|
593
|
+
dst.setZero();
|
594
|
+
return;
|
595
|
+
}
|
596
|
+
|
597
|
+
typename RhsType::PlainObject c(rhs);
|
598
|
+
|
599
|
+
// Note that the matrix Q = H_0^* H_1^*... so its inverse is Q^* = (H_0 H_1 ...)^T
|
600
|
+
c.applyOnTheLeft(householderSequence(m_qr, m_hCoeffs)
|
601
|
+
.setLength(nonzero_pivots)
|
602
|
+
.transpose()
|
603
|
+
);
|
604
|
+
|
605
|
+
m_qr.topLeftCorner(nonzero_pivots, nonzero_pivots)
|
606
|
+
.template triangularView<Upper>()
|
607
|
+
.solveInPlace(c.topRows(nonzero_pivots));
|
608
|
+
|
609
|
+
for(Index i = 0; i < nonzero_pivots; ++i) dst.row(m_colsPermutation.indices().coeff(i)) = c.row(i);
|
610
|
+
for(Index i = nonzero_pivots; i < cols(); ++i) dst.row(m_colsPermutation.indices().coeff(i)).setZero();
|
611
|
+
}
|
612
|
+
#endif
|
613
|
+
|
614
|
+
namespace internal {
|
615
|
+
|
616
|
+
template<typename DstXprType, typename MatrixType>
|
617
|
+
struct Assignment<DstXprType, Inverse<ColPivHouseholderQR<MatrixType> >, internal::assign_op<typename DstXprType::Scalar,typename ColPivHouseholderQR<MatrixType>::Scalar>, Dense2Dense>
|
618
|
+
{
|
619
|
+
typedef ColPivHouseholderQR<MatrixType> QrType;
|
620
|
+
typedef Inverse<QrType> SrcXprType;
|
621
|
+
static void run(DstXprType &dst, const SrcXprType &src, const internal::assign_op<typename DstXprType::Scalar,typename QrType::Scalar> &)
|
622
|
+
{
|
623
|
+
dst = src.nestedExpression().solve(MatrixType::Identity(src.rows(), src.cols()));
|
624
|
+
}
|
625
|
+
};
|
626
|
+
|
627
|
+
} // end namespace internal
|
628
|
+
|
629
|
+
/** \returns the matrix Q as a sequence of householder transformations.
|
630
|
+
* You can extract the meaningful part only by using:
|
631
|
+
* \code qr.householderQ().setLength(qr.nonzeroPivots()) \endcode*/
|
632
|
+
template<typename MatrixType>
|
633
|
+
typename ColPivHouseholderQR<MatrixType>::HouseholderSequenceType ColPivHouseholderQR<MatrixType>
|
634
|
+
::householderQ() const
|
635
|
+
{
|
636
|
+
eigen_assert(m_isInitialized && "ColPivHouseholderQR is not initialized.");
|
637
|
+
return HouseholderSequenceType(m_qr, m_hCoeffs.conjugate());
|
638
|
+
}
|
639
|
+
|
640
|
+
/** \return the column-pivoting Householder QR decomposition of \c *this.
|
641
|
+
*
|
642
|
+
* \sa class ColPivHouseholderQR
|
643
|
+
*/
|
644
|
+
template<typename Derived>
|
645
|
+
const ColPivHouseholderQR<typename MatrixBase<Derived>::PlainObject>
|
646
|
+
MatrixBase<Derived>::colPivHouseholderQr() const
|
647
|
+
{
|
648
|
+
return ColPivHouseholderQR<PlainObject>(eval());
|
649
|
+
}
|
650
|
+
|
651
|
+
} // end namespace Eigen
|
652
|
+
|
653
|
+
#endif // EIGEN_COLPIVOTINGHOUSEHOLDERQR_H
|