tomoto 0.1.0

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Files changed (420) hide show
  1. checksums.yaml +7 -0
  2. data/CHANGELOG.md +3 -0
  3. data/LICENSE.txt +22 -0
  4. data/README.md +123 -0
  5. data/ext/tomoto/ext.cpp +245 -0
  6. data/ext/tomoto/extconf.rb +28 -0
  7. data/lib/tomoto.rb +12 -0
  8. data/lib/tomoto/ct.rb +11 -0
  9. data/lib/tomoto/hdp.rb +11 -0
  10. data/lib/tomoto/lda.rb +67 -0
  11. data/lib/tomoto/version.rb +3 -0
  12. data/vendor/EigenRand/EigenRand/Core.h +1139 -0
  13. data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
  14. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
  15. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
  16. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
  17. data/vendor/EigenRand/EigenRand/EigenRand +19 -0
  18. data/vendor/EigenRand/EigenRand/Macro.h +24 -0
  19. data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
  20. data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
  21. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
  22. data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
  23. data/vendor/EigenRand/EigenRand/doc.h +220 -0
  24. data/vendor/EigenRand/LICENSE +21 -0
  25. data/vendor/EigenRand/README.md +288 -0
  26. data/vendor/eigen/COPYING.BSD +26 -0
  27. data/vendor/eigen/COPYING.GPL +674 -0
  28. data/vendor/eigen/COPYING.LGPL +502 -0
  29. data/vendor/eigen/COPYING.MINPACK +52 -0
  30. data/vendor/eigen/COPYING.MPL2 +373 -0
  31. data/vendor/eigen/COPYING.README +18 -0
  32. data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
  33. data/vendor/eigen/Eigen/Cholesky +46 -0
  34. data/vendor/eigen/Eigen/CholmodSupport +48 -0
  35. data/vendor/eigen/Eigen/Core +537 -0
  36. data/vendor/eigen/Eigen/Dense +7 -0
  37. data/vendor/eigen/Eigen/Eigen +2 -0
  38. data/vendor/eigen/Eigen/Eigenvalues +61 -0
  39. data/vendor/eigen/Eigen/Geometry +62 -0
  40. data/vendor/eigen/Eigen/Householder +30 -0
  41. data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
  42. data/vendor/eigen/Eigen/Jacobi +33 -0
  43. data/vendor/eigen/Eigen/LU +50 -0
  44. data/vendor/eigen/Eigen/MetisSupport +35 -0
  45. data/vendor/eigen/Eigen/OrderingMethods +73 -0
  46. data/vendor/eigen/Eigen/PaStiXSupport +48 -0
  47. data/vendor/eigen/Eigen/PardisoSupport +35 -0
  48. data/vendor/eigen/Eigen/QR +51 -0
  49. data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
  50. data/vendor/eigen/Eigen/SPQRSupport +34 -0
  51. data/vendor/eigen/Eigen/SVD +51 -0
  52. data/vendor/eigen/Eigen/Sparse +36 -0
  53. data/vendor/eigen/Eigen/SparseCholesky +45 -0
  54. data/vendor/eigen/Eigen/SparseCore +69 -0
  55. data/vendor/eigen/Eigen/SparseLU +46 -0
  56. data/vendor/eigen/Eigen/SparseQR +37 -0
  57. data/vendor/eigen/Eigen/StdDeque +27 -0
  58. data/vendor/eigen/Eigen/StdList +26 -0
  59. data/vendor/eigen/Eigen/StdVector +27 -0
  60. data/vendor/eigen/Eigen/SuperLUSupport +64 -0
  61. data/vendor/eigen/Eigen/UmfPackSupport +40 -0
  62. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
  63. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
  64. data/vendor/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  65. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
  66. data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
  67. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
  68. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
  69. data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
  70. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
  71. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
  72. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
  73. data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
  74. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
  75. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
  76. data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
  77. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
  78. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
  79. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
  80. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
  81. data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  82. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
  84. data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
  85. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
  86. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
  87. data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
  88. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
  89. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
  90. data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
  91. data/vendor/eigen/Eigen/src/Core/EigenBase.h +159 -0
  92. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +146 -0
  93. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +155 -0
  94. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
  95. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +593 -0
  96. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +187 -0
  97. data/vendor/eigen/Eigen/src/Core/IO.h +225 -0
  98. data/vendor/eigen/Eigen/src/Core/Inverse.h +118 -0
  99. data/vendor/eigen/Eigen/src/Core/Map.h +171 -0
  100. data/vendor/eigen/Eigen/src/Core/MapBase.h +303 -0
  101. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +1415 -0
  102. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +101 -0
  103. data/vendor/eigen/Eigen/src/Core/Matrix.h +459 -0
  104. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +529 -0
  105. data/vendor/eigen/Eigen/src/Core/NestByValue.h +110 -0
  106. data/vendor/eigen/Eigen/src/Core/NoAlias.h +108 -0
  107. data/vendor/eigen/Eigen/src/Core/NumTraits.h +248 -0
  108. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +633 -0
  109. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +1035 -0
  110. data/vendor/eigen/Eigen/src/Core/Product.h +186 -0
  111. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +1112 -0
  112. data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
  113. data/vendor/eigen/Eigen/src/Core/Redux.h +505 -0
  114. data/vendor/eigen/Eigen/src/Core/Ref.h +283 -0
  115. data/vendor/eigen/Eigen/src/Core/Replicate.h +142 -0
  116. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +117 -0
  117. data/vendor/eigen/Eigen/src/Core/Reverse.h +211 -0
  118. data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
  119. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +352 -0
  120. data/vendor/eigen/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  121. data/vendor/eigen/Eigen/src/Core/Solve.h +188 -0
  122. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +235 -0
  123. data/vendor/eigen/Eigen/src/Core/SolverBase.h +130 -0
  124. data/vendor/eigen/Eigen/src/Core/StableNorm.h +221 -0
  125. data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
  126. data/vendor/eigen/Eigen/src/Core/Swap.h +67 -0
  127. data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
  128. data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
  129. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
  130. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
  131. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
  132. data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
  133. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
  134. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
  135. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
  136. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
  137. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
  138. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
  139. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
  140. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
  141. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
  142. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
  143. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +674 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
  145. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
  146. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
  148. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
  149. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
  153. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
  154. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
  156. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
  160. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
  161. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
  162. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
  163. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
  164. data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  165. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
  166. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
  167. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
  168. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
  169. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  170. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
  171. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
  172. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  173. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
  174. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
  175. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
  176. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
  177. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  178. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  179. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
  180. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
  181. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
  182. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  183. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  184. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +335 -0
  185. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +163 -0
  186. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +145 -0
  187. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +398 -0
  188. data/vendor/eigen/Eigen/src/Core/util/Constants.h +547 -0
  189. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +83 -0
  190. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
  191. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +130 -0
  192. data/vendor/eigen/Eigen/src/Core/util/Macros.h +1001 -0
  193. data/vendor/eigen/Eigen/src/Core/util/Memory.h +993 -0
  194. data/vendor/eigen/Eigen/src/Core/util/Meta.h +534 -0
  195. data/vendor/eigen/Eigen/src/Core/util/NonMPL2.h +3 -0
  196. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +27 -0
  197. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +218 -0
  198. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +821 -0
  199. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  200. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +459 -0
  201. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  202. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  203. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  204. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  205. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  206. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  207. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +654 -0
  208. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +546 -0
  209. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  210. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +870 -0
  211. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  212. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +556 -0
  213. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +392 -0
  214. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +247 -0
  215. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +114 -0
  216. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +497 -0
  217. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +282 -0
  218. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +234 -0
  219. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +195 -0
  220. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +814 -0
  221. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +199 -0
  222. data/vendor/eigen/Eigen/src/Geometry/RotationBase.h +206 -0
  223. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +170 -0
  224. data/vendor/eigen/Eigen/src/Geometry/Transform.h +1542 -0
  225. data/vendor/eigen/Eigen/src/Geometry/Translation.h +208 -0
  226. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +166 -0
  227. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +161 -0
  228. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +103 -0
  229. data/vendor/eigen/Eigen/src/Householder/Householder.h +172 -0
  230. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +470 -0
  231. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  232. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +228 -0
  233. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +246 -0
  234. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +400 -0
  235. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +462 -0
  236. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +394 -0
  237. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +216 -0
  238. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +115 -0
  239. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +462 -0
  240. data/vendor/eigen/Eigen/src/LU/Determinant.h +101 -0
  241. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +891 -0
  242. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +415 -0
  243. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +611 -0
  244. data/vendor/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  245. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +338 -0
  246. data/vendor/eigen/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  247. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +445 -0
  248. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +1843 -0
  249. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +157 -0
  250. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  251. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +543 -0
  252. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +653 -0
  253. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  254. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +562 -0
  255. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +676 -0
  256. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +409 -0
  257. data/vendor/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  258. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +313 -0
  259. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +1246 -0
  260. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +804 -0
  261. data/vendor/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  262. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +315 -0
  263. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  264. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +689 -0
  265. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
  266. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +377 -0
  267. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +258 -0
  268. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  269. data/vendor/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  270. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +216 -0
  271. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +603 -0
  272. data/vendor/eigen/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  273. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +341 -0
  274. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +726 -0
  275. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +148 -0
  276. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +320 -0
  277. data/vendor/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  278. data/vendor/eigen/Eigen/src/SparseCore/SparseDot.h +98 -0
  279. data/vendor/eigen/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  280. data/vendor/eigen/Eigen/src/SparseCore/SparseMap.h +305 -0
  281. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +1403 -0
  282. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +405 -0
  283. data/vendor/eigen/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  284. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +169 -0
  285. data/vendor/eigen/Eigen/src/SparseCore/SparseRedux.h +49 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +397 -0
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +656 -0
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +178 -0
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +478 -0
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +253 -0
  295. data/vendor/eigen/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  296. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +773 -0
  297. data/vendor/eigen/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  298. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  299. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  300. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +301 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  303. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  304. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  306. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  307. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  308. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  309. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  310. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  311. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  312. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  313. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +745 -0
  314. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +126 -0
  315. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
  316. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
  317. data/vendor/eigen/Eigen/src/StlSupport/details.h +84 -0
  318. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
  319. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
  320. data/vendor/eigen/Eigen/src/misc/Image.h +82 -0
  321. data/vendor/eigen/Eigen/src/misc/Kernel.h +79 -0
  322. data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
  323. data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
  324. data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
  325. data/vendor/eigen/Eigen/src/misc/lapacke.h +16291 -0
  326. data/vendor/eigen/Eigen/src/misc/lapacke_mangling.h +17 -0
  327. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +332 -0
  328. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +552 -0
  329. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +1058 -0
  330. data/vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  331. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +163 -0
  332. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  333. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +85 -0
  334. data/vendor/eigen/README.md +3 -0
  335. data/vendor/eigen/bench/README.txt +55 -0
  336. data/vendor/eigen/bench/btl/COPYING +340 -0
  337. data/vendor/eigen/bench/btl/README +154 -0
  338. data/vendor/eigen/bench/tensors/README +21 -0
  339. data/vendor/eigen/blas/README.txt +6 -0
  340. data/vendor/eigen/demos/mandelbrot/README +10 -0
  341. data/vendor/eigen/demos/mix_eigen_and_c/README +9 -0
  342. data/vendor/eigen/demos/opengl/README +13 -0
  343. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +1760 -0
  344. data/vendor/eigen/unsupported/README.txt +50 -0
  345. data/vendor/tomotopy/LICENSE +21 -0
  346. data/vendor/tomotopy/README.kr.rst +375 -0
  347. data/vendor/tomotopy/README.rst +382 -0
  348. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
  349. data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
  350. data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
  351. data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
  352. data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
  353. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
  354. data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
  355. data/vendor/tomotopy/src/TopicModel/DMRModel.cpp +13 -0
  356. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +374 -0
  357. data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
  358. data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
  359. data/vendor/tomotopy/src/TopicModel/DTModel.cpp +15 -0
  360. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
  361. data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
  362. data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
  363. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
  364. data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
  365. data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
  366. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
  367. data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
  368. data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
  369. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
  370. data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
  371. data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
  372. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +588 -0
  373. data/vendor/tomotopy/src/TopicModel/LDA.h +144 -0
  374. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
  375. data/vendor/tomotopy/src/TopicModel/LDAModel.cpp +13 -0
  376. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
  377. data/vendor/tomotopy/src/TopicModel/LLDA.h +45 -0
  378. data/vendor/tomotopy/src/TopicModel/LLDAModel.cpp +13 -0
  379. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +203 -0
  380. data/vendor/tomotopy/src/TopicModel/MGLDA.h +63 -0
  381. data/vendor/tomotopy/src/TopicModel/MGLDAModel.cpp +17 -0
  382. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +558 -0
  383. data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
  384. data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
  385. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
  386. data/vendor/tomotopy/src/TopicModel/PLDA.h +17 -0
  387. data/vendor/tomotopy/src/TopicModel/PLDAModel.cpp +13 -0
  388. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +214 -0
  389. data/vendor/tomotopy/src/TopicModel/SLDA.h +54 -0
  390. data/vendor/tomotopy/src/TopicModel/SLDAModel.cpp +17 -0
  391. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +456 -0
  392. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +692 -0
  393. data/vendor/tomotopy/src/Utils/AliasMethod.hpp +169 -0
  394. data/vendor/tomotopy/src/Utils/Dictionary.h +80 -0
  395. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +181 -0
  396. data/vendor/tomotopy/src/Utils/LBFGS.h +202 -0
  397. data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h +120 -0
  398. data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h +122 -0
  399. data/vendor/tomotopy/src/Utils/LBFGS/Param.h +213 -0
  400. data/vendor/tomotopy/src/Utils/LUT.hpp +82 -0
  401. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
  402. data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
  403. data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
  404. data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
  405. data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
  406. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
  407. data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
  408. data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
  409. data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
  410. data/vendor/tomotopy/src/Utils/exception.h +28 -0
  411. data/vendor/tomotopy/src/Utils/math.h +281 -0
  412. data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
  413. data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
  414. data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
  415. data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
  416. data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
  417. data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
  418. data/vendor/tomotopy/src/Utils/text.hpp +49 -0
  419. data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
  420. metadata +531 -0
@@ -0,0 +1,1035 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ // Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
6
+ //
7
+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
10
+
11
+ #ifndef EIGEN_DENSESTORAGEBASE_H
12
+ #define EIGEN_DENSESTORAGEBASE_H
13
+
14
+ #if defined(EIGEN_INITIALIZE_MATRICES_BY_ZERO)
15
+ # define EIGEN_INITIALIZE_COEFFS
16
+ # define EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED for(int i=0;i<base().size();++i) coeffRef(i)=Scalar(0);
17
+ #elif defined(EIGEN_INITIALIZE_MATRICES_BY_NAN)
18
+ # define EIGEN_INITIALIZE_COEFFS
19
+ # define EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED for(int i=0;i<base().size();++i) coeffRef(i)=std::numeric_limits<Scalar>::quiet_NaN();
20
+ #else
21
+ # undef EIGEN_INITIALIZE_COEFFS
22
+ # define EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
23
+ #endif
24
+
25
+ namespace Eigen {
26
+
27
+ namespace internal {
28
+
29
+ template<int MaxSizeAtCompileTime> struct check_rows_cols_for_overflow {
30
+ template<typename Index>
31
+ EIGEN_DEVICE_FUNC
32
+ static EIGEN_ALWAYS_INLINE void run(Index, Index)
33
+ {
34
+ }
35
+ };
36
+
37
+ template<> struct check_rows_cols_for_overflow<Dynamic> {
38
+ template<typename Index>
39
+ EIGEN_DEVICE_FUNC
40
+ static EIGEN_ALWAYS_INLINE void run(Index rows, Index cols)
41
+ {
42
+ // http://hg.mozilla.org/mozilla-central/file/6c8a909977d3/xpcom/ds/CheckedInt.h#l242
43
+ // we assume Index is signed
44
+ Index max_index = (std::size_t(1) << (8 * sizeof(Index) - 1)) - 1; // assume Index is signed
45
+ bool error = (rows == 0 || cols == 0) ? false
46
+ : (rows > max_index / cols);
47
+ if (error)
48
+ throw_std_bad_alloc();
49
+ }
50
+ };
51
+
52
+ template <typename Derived,
53
+ typename OtherDerived = Derived,
54
+ bool IsVector = bool(Derived::IsVectorAtCompileTime) && bool(OtherDerived::IsVectorAtCompileTime)>
55
+ struct conservative_resize_like_impl;
56
+
57
+ template<typename MatrixTypeA, typename MatrixTypeB, bool SwapPointers> struct matrix_swap_impl;
58
+
59
+ } // end namespace internal
60
+
61
+ #ifdef EIGEN_PARSED_BY_DOXYGEN
62
+ namespace doxygen {
63
+
64
+ // This is a workaround to doxygen not being able to understand the inheritance logic
65
+ // when it is hidden by the dense_xpr_base helper struct.
66
+ // Moreover, doxygen fails to include members that are not documented in the declaration body of
67
+ // MatrixBase if we inherits MatrixBase<Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >,
68
+ // this is why we simply inherits MatrixBase, though this does not make sense.
69
+
70
+ /** This class is just a workaround for Doxygen and it does not not actually exist. */
71
+ template<typename Derived> struct dense_xpr_base_dispatcher;
72
+ /** This class is just a workaround for Doxygen and it does not not actually exist. */
73
+ template<typename _Scalar, int _Rows, int _Cols, int _Options, int _MaxRows, int _MaxCols>
74
+ struct dense_xpr_base_dispatcher<Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >
75
+ : public MatrixBase {};
76
+ /** This class is just a workaround for Doxygen and it does not not actually exist. */
77
+ template<typename _Scalar, int _Rows, int _Cols, int _Options, int _MaxRows, int _MaxCols>
78
+ struct dense_xpr_base_dispatcher<Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >
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+ : public ArrayBase {};
80
+
81
+ } // namespace doxygen
82
+
83
+ /** \class PlainObjectBase
84
+ * \ingroup Core_Module
85
+ * \brief %Dense storage base class for matrices and arrays.
86
+ *
87
+ * This class can be extended with the help of the plugin mechanism described on the page
88
+ * \ref TopicCustomizing_Plugins by defining the preprocessor symbol \c EIGEN_PLAINOBJECTBASE_PLUGIN.
89
+ *
90
+ * \tparam Derived is the derived type, e.g., a Matrix or Array
91
+ *
92
+ * \sa \ref TopicClassHierarchy
93
+ */
94
+ template<typename Derived>
95
+ class PlainObjectBase : public doxygen::dense_xpr_base_dispatcher<Derived>
96
+ #else
97
+ template<typename Derived>
98
+ class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
99
+ #endif
100
+ {
101
+ public:
102
+ enum { Options = internal::traits<Derived>::Options };
103
+ typedef typename internal::dense_xpr_base<Derived>::type Base;
104
+
105
+ typedef typename internal::traits<Derived>::StorageKind StorageKind;
106
+ typedef typename internal::traits<Derived>::Scalar Scalar;
107
+
108
+ typedef typename internal::packet_traits<Scalar>::type PacketScalar;
109
+ typedef typename NumTraits<Scalar>::Real RealScalar;
110
+ typedef Derived DenseType;
111
+
112
+ using Base::RowsAtCompileTime;
113
+ using Base::ColsAtCompileTime;
114
+ using Base::SizeAtCompileTime;
115
+ using Base::MaxRowsAtCompileTime;
116
+ using Base::MaxColsAtCompileTime;
117
+ using Base::MaxSizeAtCompileTime;
118
+ using Base::IsVectorAtCompileTime;
119
+ using Base::Flags;
120
+
121
+ template<typename PlainObjectType, int MapOptions, typename StrideType> friend class Eigen::Map;
122
+ friend class Eigen::Map<Derived, Unaligned>;
123
+ typedef Eigen::Map<Derived, Unaligned> MapType;
124
+ friend class Eigen::Map<const Derived, Unaligned>;
125
+ typedef const Eigen::Map<const Derived, Unaligned> ConstMapType;
126
+ #if EIGEN_MAX_ALIGN_BYTES>0
127
+ // for EIGEN_MAX_ALIGN_BYTES==0, AlignedMax==Unaligned, and many compilers generate warnings for friend-ing a class twice.
128
+ friend class Eigen::Map<Derived, AlignedMax>;
129
+ friend class Eigen::Map<const Derived, AlignedMax>;
130
+ #endif
131
+ typedef Eigen::Map<Derived, AlignedMax> AlignedMapType;
132
+ typedef const Eigen::Map<const Derived, AlignedMax> ConstAlignedMapType;
133
+ template<typename StrideType> struct StridedMapType { typedef Eigen::Map<Derived, Unaligned, StrideType> type; };
134
+ template<typename StrideType> struct StridedConstMapType { typedef Eigen::Map<const Derived, Unaligned, StrideType> type; };
135
+ template<typename StrideType> struct StridedAlignedMapType { typedef Eigen::Map<Derived, AlignedMax, StrideType> type; };
136
+ template<typename StrideType> struct StridedConstAlignedMapType { typedef Eigen::Map<const Derived, AlignedMax, StrideType> type; };
137
+
138
+ protected:
139
+ DenseStorage<Scalar, Base::MaxSizeAtCompileTime, Base::RowsAtCompileTime, Base::ColsAtCompileTime, Options> m_storage;
140
+
141
+ public:
142
+ enum { NeedsToAlign = (SizeAtCompileTime != Dynamic) && (internal::traits<Derived>::Alignment>0) };
143
+ EIGEN_MAKE_ALIGNED_OPERATOR_NEW_IF(NeedsToAlign)
144
+
145
+ EIGEN_DEVICE_FUNC
146
+ Base& base() { return *static_cast<Base*>(this); }
147
+ EIGEN_DEVICE_FUNC
148
+ const Base& base() const { return *static_cast<const Base*>(this); }
149
+
150
+ EIGEN_DEVICE_FUNC
151
+ EIGEN_STRONG_INLINE Index rows() const { return m_storage.rows(); }
152
+ EIGEN_DEVICE_FUNC
153
+ EIGEN_STRONG_INLINE Index cols() const { return m_storage.cols(); }
154
+
155
+ /** This is an overloaded version of DenseCoeffsBase<Derived,ReadOnlyAccessors>::coeff(Index,Index) const
156
+ * provided to by-pass the creation of an evaluator of the expression, thus saving compilation efforts.
157
+ *
158
+ * See DenseCoeffsBase<Derived,ReadOnlyAccessors>::coeff(Index) const for details. */
159
+ EIGEN_DEVICE_FUNC
160
+ EIGEN_STRONG_INLINE const Scalar& coeff(Index rowId, Index colId) const
161
+ {
162
+ if(Flags & RowMajorBit)
163
+ return m_storage.data()[colId + rowId * m_storage.cols()];
164
+ else // column-major
165
+ return m_storage.data()[rowId + colId * m_storage.rows()];
166
+ }
167
+
168
+ /** This is an overloaded version of DenseCoeffsBase<Derived,ReadOnlyAccessors>::coeff(Index) const
169
+ * provided to by-pass the creation of an evaluator of the expression, thus saving compilation efforts.
170
+ *
171
+ * See DenseCoeffsBase<Derived,ReadOnlyAccessors>::coeff(Index) const for details. */
172
+ EIGEN_DEVICE_FUNC
173
+ EIGEN_STRONG_INLINE const Scalar& coeff(Index index) const
174
+ {
175
+ return m_storage.data()[index];
176
+ }
177
+
178
+ /** This is an overloaded version of DenseCoeffsBase<Derived,WriteAccessors>::coeffRef(Index,Index) const
179
+ * provided to by-pass the creation of an evaluator of the expression, thus saving compilation efforts.
180
+ *
181
+ * See DenseCoeffsBase<Derived,WriteAccessors>::coeffRef(Index,Index) const for details. */
182
+ EIGEN_DEVICE_FUNC
183
+ EIGEN_STRONG_INLINE Scalar& coeffRef(Index rowId, Index colId)
184
+ {
185
+ if(Flags & RowMajorBit)
186
+ return m_storage.data()[colId + rowId * m_storage.cols()];
187
+ else // column-major
188
+ return m_storage.data()[rowId + colId * m_storage.rows()];
189
+ }
190
+
191
+ /** This is an overloaded version of DenseCoeffsBase<Derived,WriteAccessors>::coeffRef(Index) const
192
+ * provided to by-pass the creation of an evaluator of the expression, thus saving compilation efforts.
193
+ *
194
+ * See DenseCoeffsBase<Derived,WriteAccessors>::coeffRef(Index) const for details. */
195
+ EIGEN_DEVICE_FUNC
196
+ EIGEN_STRONG_INLINE Scalar& coeffRef(Index index)
197
+ {
198
+ return m_storage.data()[index];
199
+ }
200
+
201
+ /** This is the const version of coeffRef(Index,Index) which is thus synonym of coeff(Index,Index).
202
+ * It is provided for convenience. */
203
+ EIGEN_DEVICE_FUNC
204
+ EIGEN_STRONG_INLINE const Scalar& coeffRef(Index rowId, Index colId) const
205
+ {
206
+ if(Flags & RowMajorBit)
207
+ return m_storage.data()[colId + rowId * m_storage.cols()];
208
+ else // column-major
209
+ return m_storage.data()[rowId + colId * m_storage.rows()];
210
+ }
211
+
212
+ /** This is the const version of coeffRef(Index) which is thus synonym of coeff(Index).
213
+ * It is provided for convenience. */
214
+ EIGEN_DEVICE_FUNC
215
+ EIGEN_STRONG_INLINE const Scalar& coeffRef(Index index) const
216
+ {
217
+ return m_storage.data()[index];
218
+ }
219
+
220
+ /** \internal */
221
+ template<int LoadMode>
222
+ EIGEN_STRONG_INLINE PacketScalar packet(Index rowId, Index colId) const
223
+ {
224
+ return internal::ploadt<PacketScalar, LoadMode>
225
+ (m_storage.data() + (Flags & RowMajorBit
226
+ ? colId + rowId * m_storage.cols()
227
+ : rowId + colId * m_storage.rows()));
228
+ }
229
+
230
+ /** \internal */
231
+ template<int LoadMode>
232
+ EIGEN_STRONG_INLINE PacketScalar packet(Index index) const
233
+ {
234
+ return internal::ploadt<PacketScalar, LoadMode>(m_storage.data() + index);
235
+ }
236
+
237
+ /** \internal */
238
+ template<int StoreMode>
239
+ EIGEN_STRONG_INLINE void writePacket(Index rowId, Index colId, const PacketScalar& val)
240
+ {
241
+ internal::pstoret<Scalar, PacketScalar, StoreMode>
242
+ (m_storage.data() + (Flags & RowMajorBit
243
+ ? colId + rowId * m_storage.cols()
244
+ : rowId + colId * m_storage.rows()), val);
245
+ }
246
+
247
+ /** \internal */
248
+ template<int StoreMode>
249
+ EIGEN_STRONG_INLINE void writePacket(Index index, const PacketScalar& val)
250
+ {
251
+ internal::pstoret<Scalar, PacketScalar, StoreMode>(m_storage.data() + index, val);
252
+ }
253
+
254
+ /** \returns a const pointer to the data array of this matrix */
255
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Scalar *data() const
256
+ { return m_storage.data(); }
257
+
258
+ /** \returns a pointer to the data array of this matrix */
259
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Scalar *data()
260
+ { return m_storage.data(); }
261
+
262
+ /** Resizes \c *this to a \a rows x \a cols matrix.
263
+ *
264
+ * This method is intended for dynamic-size matrices, although it is legal to call it on any
265
+ * matrix as long as fixed dimensions are left unchanged. If you only want to change the number
266
+ * of rows and/or of columns, you can use resize(NoChange_t, Index), resize(Index, NoChange_t).
267
+ *
268
+ * If the current number of coefficients of \c *this exactly matches the
269
+ * product \a rows * \a cols, then no memory allocation is performed and
270
+ * the current values are left unchanged. In all other cases, including
271
+ * shrinking, the data is reallocated and all previous values are lost.
272
+ *
273
+ * Example: \include Matrix_resize_int_int.cpp
274
+ * Output: \verbinclude Matrix_resize_int_int.out
275
+ *
276
+ * \sa resize(Index) for vectors, resize(NoChange_t, Index), resize(Index, NoChange_t)
277
+ */
278
+ EIGEN_DEVICE_FUNC
279
+ EIGEN_STRONG_INLINE void resize(Index rows, Index cols)
280
+ {
281
+ eigen_assert( EIGEN_IMPLIES(RowsAtCompileTime!=Dynamic,rows==RowsAtCompileTime)
282
+ && EIGEN_IMPLIES(ColsAtCompileTime!=Dynamic,cols==ColsAtCompileTime)
283
+ && EIGEN_IMPLIES(RowsAtCompileTime==Dynamic && MaxRowsAtCompileTime!=Dynamic,rows<=MaxRowsAtCompileTime)
284
+ && EIGEN_IMPLIES(ColsAtCompileTime==Dynamic && MaxColsAtCompileTime!=Dynamic,cols<=MaxColsAtCompileTime)
285
+ && rows>=0 && cols>=0 && "Invalid sizes when resizing a matrix or array.");
286
+ internal::check_rows_cols_for_overflow<MaxSizeAtCompileTime>::run(rows, cols);
287
+ #ifdef EIGEN_INITIALIZE_COEFFS
288
+ Index size = rows*cols;
289
+ bool size_changed = size != this->size();
290
+ m_storage.resize(size, rows, cols);
291
+ if(size_changed) EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
292
+ #else
293
+ m_storage.resize(rows*cols, rows, cols);
294
+ #endif
295
+ }
296
+
297
+ /** Resizes \c *this to a vector of length \a size
298
+ *
299
+ * \only_for_vectors. This method does not work for
300
+ * partially dynamic matrices when the static dimension is anything other
301
+ * than 1. For example it will not work with Matrix<double, 2, Dynamic>.
302
+ *
303
+ * Example: \include Matrix_resize_int.cpp
304
+ * Output: \verbinclude Matrix_resize_int.out
305
+ *
306
+ * \sa resize(Index,Index), resize(NoChange_t, Index), resize(Index, NoChange_t)
307
+ */
308
+ EIGEN_DEVICE_FUNC
309
+ inline void resize(Index size)
310
+ {
311
+ EIGEN_STATIC_ASSERT_VECTOR_ONLY(PlainObjectBase)
312
+ eigen_assert(((SizeAtCompileTime == Dynamic && (MaxSizeAtCompileTime==Dynamic || size<=MaxSizeAtCompileTime)) || SizeAtCompileTime == size) && size>=0);
313
+ #ifdef EIGEN_INITIALIZE_COEFFS
314
+ bool size_changed = size != this->size();
315
+ #endif
316
+ if(RowsAtCompileTime == 1)
317
+ m_storage.resize(size, 1, size);
318
+ else
319
+ m_storage.resize(size, size, 1);
320
+ #ifdef EIGEN_INITIALIZE_COEFFS
321
+ if(size_changed) EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
322
+ #endif
323
+ }
324
+
325
+ /** Resizes the matrix, changing only the number of columns. For the parameter of type NoChange_t, just pass the special value \c NoChange
326
+ * as in the example below.
327
+ *
328
+ * Example: \include Matrix_resize_NoChange_int.cpp
329
+ * Output: \verbinclude Matrix_resize_NoChange_int.out
330
+ *
331
+ * \sa resize(Index,Index)
332
+ */
333
+ EIGEN_DEVICE_FUNC
334
+ inline void resize(NoChange_t, Index cols)
335
+ {
336
+ resize(rows(), cols);
337
+ }
338
+
339
+ /** Resizes the matrix, changing only the number of rows. For the parameter of type NoChange_t, just pass the special value \c NoChange
340
+ * as in the example below.
341
+ *
342
+ * Example: \include Matrix_resize_int_NoChange.cpp
343
+ * Output: \verbinclude Matrix_resize_int_NoChange.out
344
+ *
345
+ * \sa resize(Index,Index)
346
+ */
347
+ EIGEN_DEVICE_FUNC
348
+ inline void resize(Index rows, NoChange_t)
349
+ {
350
+ resize(rows, cols());
351
+ }
352
+
353
+ /** Resizes \c *this to have the same dimensions as \a other.
354
+ * Takes care of doing all the checking that's needed.
355
+ *
356
+ * Note that copying a row-vector into a vector (and conversely) is allowed.
357
+ * The resizing, if any, is then done in the appropriate way so that row-vectors
358
+ * remain row-vectors and vectors remain vectors.
359
+ */
360
+ template<typename OtherDerived>
361
+ EIGEN_DEVICE_FUNC
362
+ EIGEN_STRONG_INLINE void resizeLike(const EigenBase<OtherDerived>& _other)
363
+ {
364
+ const OtherDerived& other = _other.derived();
365
+ internal::check_rows_cols_for_overflow<MaxSizeAtCompileTime>::run(other.rows(), other.cols());
366
+ const Index othersize = other.rows()*other.cols();
367
+ if(RowsAtCompileTime == 1)
368
+ {
369
+ eigen_assert(other.rows() == 1 || other.cols() == 1);
370
+ resize(1, othersize);
371
+ }
372
+ else if(ColsAtCompileTime == 1)
373
+ {
374
+ eigen_assert(other.rows() == 1 || other.cols() == 1);
375
+ resize(othersize, 1);
376
+ }
377
+ else resize(other.rows(), other.cols());
378
+ }
379
+
380
+ /** Resizes the matrix to \a rows x \a cols while leaving old values untouched.
381
+ *
382
+ * The method is intended for matrices of dynamic size. If you only want to change the number
383
+ * of rows and/or of columns, you can use conservativeResize(NoChange_t, Index) or
384
+ * conservativeResize(Index, NoChange_t).
385
+ *
386
+ * Matrices are resized relative to the top-left element. In case values need to be
387
+ * appended to the matrix they will be uninitialized.
388
+ */
389
+ EIGEN_DEVICE_FUNC
390
+ EIGEN_STRONG_INLINE void conservativeResize(Index rows, Index cols)
391
+ {
392
+ internal::conservative_resize_like_impl<Derived>::run(*this, rows, cols);
393
+ }
394
+
395
+ /** Resizes the matrix to \a rows x \a cols while leaving old values untouched.
396
+ *
397
+ * As opposed to conservativeResize(Index rows, Index cols), this version leaves
398
+ * the number of columns unchanged.
399
+ *
400
+ * In case the matrix is growing, new rows will be uninitialized.
401
+ */
402
+ EIGEN_DEVICE_FUNC
403
+ EIGEN_STRONG_INLINE void conservativeResize(Index rows, NoChange_t)
404
+ {
405
+ // Note: see the comment in conservativeResize(Index,Index)
406
+ conservativeResize(rows, cols());
407
+ }
408
+
409
+ /** Resizes the matrix to \a rows x \a cols while leaving old values untouched.
410
+ *
411
+ * As opposed to conservativeResize(Index rows, Index cols), this version leaves
412
+ * the number of rows unchanged.
413
+ *
414
+ * In case the matrix is growing, new columns will be uninitialized.
415
+ */
416
+ EIGEN_DEVICE_FUNC
417
+ EIGEN_STRONG_INLINE void conservativeResize(NoChange_t, Index cols)
418
+ {
419
+ // Note: see the comment in conservativeResize(Index,Index)
420
+ conservativeResize(rows(), cols);
421
+ }
422
+
423
+ /** Resizes the vector to \a size while retaining old values.
424
+ *
425
+ * \only_for_vectors. This method does not work for
426
+ * partially dynamic matrices when the static dimension is anything other
427
+ * than 1. For example it will not work with Matrix<double, 2, Dynamic>.
428
+ *
429
+ * When values are appended, they will be uninitialized.
430
+ */
431
+ EIGEN_DEVICE_FUNC
432
+ EIGEN_STRONG_INLINE void conservativeResize(Index size)
433
+ {
434
+ internal::conservative_resize_like_impl<Derived>::run(*this, size);
435
+ }
436
+
437
+ /** Resizes the matrix to \a rows x \a cols of \c other, while leaving old values untouched.
438
+ *
439
+ * The method is intended for matrices of dynamic size. If you only want to change the number
440
+ * of rows and/or of columns, you can use conservativeResize(NoChange_t, Index) or
441
+ * conservativeResize(Index, NoChange_t).
442
+ *
443
+ * Matrices are resized relative to the top-left element. In case values need to be
444
+ * appended to the matrix they will copied from \c other.
445
+ */
446
+ template<typename OtherDerived>
447
+ EIGEN_DEVICE_FUNC
448
+ EIGEN_STRONG_INLINE void conservativeResizeLike(const DenseBase<OtherDerived>& other)
449
+ {
450
+ internal::conservative_resize_like_impl<Derived,OtherDerived>::run(*this, other);
451
+ }
452
+
453
+ /** This is a special case of the templated operator=. Its purpose is to
454
+ * prevent a default operator= from hiding the templated operator=.
455
+ */
456
+ EIGEN_DEVICE_FUNC
457
+ EIGEN_STRONG_INLINE Derived& operator=(const PlainObjectBase& other)
458
+ {
459
+ return _set(other);
460
+ }
461
+
462
+ /** \sa MatrixBase::lazyAssign() */
463
+ template<typename OtherDerived>
464
+ EIGEN_DEVICE_FUNC
465
+ EIGEN_STRONG_INLINE Derived& lazyAssign(const DenseBase<OtherDerived>& other)
466
+ {
467
+ _resize_to_match(other);
468
+ return Base::lazyAssign(other.derived());
469
+ }
470
+
471
+ template<typename OtherDerived>
472
+ EIGEN_DEVICE_FUNC
473
+ EIGEN_STRONG_INLINE Derived& operator=(const ReturnByValue<OtherDerived>& func)
474
+ {
475
+ resize(func.rows(), func.cols());
476
+ return Base::operator=(func);
477
+ }
478
+
479
+ // Prevent user from trying to instantiate PlainObjectBase objects
480
+ // by making all its constructor protected. See bug 1074.
481
+ protected:
482
+
483
+ EIGEN_DEVICE_FUNC
484
+ EIGEN_STRONG_INLINE PlainObjectBase() : m_storage()
485
+ {
486
+ // _check_template_params();
487
+ // EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
488
+ }
489
+
490
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
491
+ // FIXME is it still needed ?
492
+ /** \internal */
493
+ EIGEN_DEVICE_FUNC
494
+ explicit PlainObjectBase(internal::constructor_without_unaligned_array_assert)
495
+ : m_storage(internal::constructor_without_unaligned_array_assert())
496
+ {
497
+ // _check_template_params(); EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
498
+ }
499
+ #endif
500
+
501
+ #if EIGEN_HAS_RVALUE_REFERENCES
502
+ EIGEN_DEVICE_FUNC
503
+ PlainObjectBase(PlainObjectBase&& other) EIGEN_NOEXCEPT
504
+ : m_storage( std::move(other.m_storage) )
505
+ {
506
+ }
507
+
508
+ EIGEN_DEVICE_FUNC
509
+ PlainObjectBase& operator=(PlainObjectBase&& other) EIGEN_NOEXCEPT
510
+ {
511
+ using std::swap;
512
+ swap(m_storage, other.m_storage);
513
+ return *this;
514
+ }
515
+ #endif
516
+
517
+ /** Copy constructor */
518
+ EIGEN_DEVICE_FUNC
519
+ EIGEN_STRONG_INLINE PlainObjectBase(const PlainObjectBase& other)
520
+ : Base(), m_storage(other.m_storage) { }
521
+ EIGEN_DEVICE_FUNC
522
+ EIGEN_STRONG_INLINE PlainObjectBase(Index size, Index rows, Index cols)
523
+ : m_storage(size, rows, cols)
524
+ {
525
+ // _check_template_params();
526
+ // EIGEN_INITIALIZE_COEFFS_IF_THAT_OPTION_IS_ENABLED
527
+ }
528
+
529
+ /** \sa PlainObjectBase::operator=(const EigenBase<OtherDerived>&) */
530
+ template<typename OtherDerived>
531
+ EIGEN_DEVICE_FUNC
532
+ EIGEN_STRONG_INLINE PlainObjectBase(const DenseBase<OtherDerived> &other)
533
+ : m_storage()
534
+ {
535
+ _check_template_params();
536
+ resizeLike(other);
537
+ _set_noalias(other);
538
+ }
539
+
540
+ /** \sa PlainObjectBase::operator=(const EigenBase<OtherDerived>&) */
541
+ template<typename OtherDerived>
542
+ EIGEN_DEVICE_FUNC
543
+ EIGEN_STRONG_INLINE PlainObjectBase(const EigenBase<OtherDerived> &other)
544
+ : m_storage()
545
+ {
546
+ _check_template_params();
547
+ resizeLike(other);
548
+ *this = other.derived();
549
+ }
550
+ /** \brief Copy constructor with in-place evaluation */
551
+ template<typename OtherDerived>
552
+ EIGEN_DEVICE_FUNC
553
+ EIGEN_STRONG_INLINE PlainObjectBase(const ReturnByValue<OtherDerived>& other)
554
+ {
555
+ _check_template_params();
556
+ // FIXME this does not automatically transpose vectors if necessary
557
+ resize(other.rows(), other.cols());
558
+ other.evalTo(this->derived());
559
+ }
560
+
561
+ public:
562
+
563
+ /** \brief Copies the generic expression \a other into *this.
564
+ * \copydetails DenseBase::operator=(const EigenBase<OtherDerived> &other)
565
+ */
566
+ template<typename OtherDerived>
567
+ EIGEN_DEVICE_FUNC
568
+ EIGEN_STRONG_INLINE Derived& operator=(const EigenBase<OtherDerived> &other)
569
+ {
570
+ _resize_to_match(other);
571
+ Base::operator=(other.derived());
572
+ return this->derived();
573
+ }
574
+
575
+ /** \name Map
576
+ * These are convenience functions returning Map objects. The Map() static functions return unaligned Map objects,
577
+ * while the AlignedMap() functions return aligned Map objects and thus should be called only with 16-byte-aligned
578
+ * \a data pointers.
579
+ *
580
+ * Here is an example using strides:
581
+ * \include Matrix_Map_stride.cpp
582
+ * Output: \verbinclude Matrix_Map_stride.out
583
+ *
584
+ * \see class Map
585
+ */
586
+ //@{
587
+ static inline ConstMapType Map(const Scalar* data)
588
+ { return ConstMapType(data); }
589
+ static inline MapType Map(Scalar* data)
590
+ { return MapType(data); }
591
+ static inline ConstMapType Map(const Scalar* data, Index size)
592
+ { return ConstMapType(data, size); }
593
+ static inline MapType Map(Scalar* data, Index size)
594
+ { return MapType(data, size); }
595
+ static inline ConstMapType Map(const Scalar* data, Index rows, Index cols)
596
+ { return ConstMapType(data, rows, cols); }
597
+ static inline MapType Map(Scalar* data, Index rows, Index cols)
598
+ { return MapType(data, rows, cols); }
599
+
600
+ static inline ConstAlignedMapType MapAligned(const Scalar* data)
601
+ { return ConstAlignedMapType(data); }
602
+ static inline AlignedMapType MapAligned(Scalar* data)
603
+ { return AlignedMapType(data); }
604
+ static inline ConstAlignedMapType MapAligned(const Scalar* data, Index size)
605
+ { return ConstAlignedMapType(data, size); }
606
+ static inline AlignedMapType MapAligned(Scalar* data, Index size)
607
+ { return AlignedMapType(data, size); }
608
+ static inline ConstAlignedMapType MapAligned(const Scalar* data, Index rows, Index cols)
609
+ { return ConstAlignedMapType(data, rows, cols); }
610
+ static inline AlignedMapType MapAligned(Scalar* data, Index rows, Index cols)
611
+ { return AlignedMapType(data, rows, cols); }
612
+
613
+ template<int Outer, int Inner>
614
+ static inline typename StridedConstMapType<Stride<Outer, Inner> >::type Map(const Scalar* data, const Stride<Outer, Inner>& stride)
615
+ { return typename StridedConstMapType<Stride<Outer, Inner> >::type(data, stride); }
616
+ template<int Outer, int Inner>
617
+ static inline typename StridedMapType<Stride<Outer, Inner> >::type Map(Scalar* data, const Stride<Outer, Inner>& stride)
618
+ { return typename StridedMapType<Stride<Outer, Inner> >::type(data, stride); }
619
+ template<int Outer, int Inner>
620
+ static inline typename StridedConstMapType<Stride<Outer, Inner> >::type Map(const Scalar* data, Index size, const Stride<Outer, Inner>& stride)
621
+ { return typename StridedConstMapType<Stride<Outer, Inner> >::type(data, size, stride); }
622
+ template<int Outer, int Inner>
623
+ static inline typename StridedMapType<Stride<Outer, Inner> >::type Map(Scalar* data, Index size, const Stride<Outer, Inner>& stride)
624
+ { return typename StridedMapType<Stride<Outer, Inner> >::type(data, size, stride); }
625
+ template<int Outer, int Inner>
626
+ static inline typename StridedConstMapType<Stride<Outer, Inner> >::type Map(const Scalar* data, Index rows, Index cols, const Stride<Outer, Inner>& stride)
627
+ { return typename StridedConstMapType<Stride<Outer, Inner> >::type(data, rows, cols, stride); }
628
+ template<int Outer, int Inner>
629
+ static inline typename StridedMapType<Stride<Outer, Inner> >::type Map(Scalar* data, Index rows, Index cols, const Stride<Outer, Inner>& stride)
630
+ { return typename StridedMapType<Stride<Outer, Inner> >::type(data, rows, cols, stride); }
631
+
632
+ template<int Outer, int Inner>
633
+ static inline typename StridedConstAlignedMapType<Stride<Outer, Inner> >::type MapAligned(const Scalar* data, const Stride<Outer, Inner>& stride)
634
+ { return typename StridedConstAlignedMapType<Stride<Outer, Inner> >::type(data, stride); }
635
+ template<int Outer, int Inner>
636
+ static inline typename StridedAlignedMapType<Stride<Outer, Inner> >::type MapAligned(Scalar* data, const Stride<Outer, Inner>& stride)
637
+ { return typename StridedAlignedMapType<Stride<Outer, Inner> >::type(data, stride); }
638
+ template<int Outer, int Inner>
639
+ static inline typename StridedConstAlignedMapType<Stride<Outer, Inner> >::type MapAligned(const Scalar* data, Index size, const Stride<Outer, Inner>& stride)
640
+ { return typename StridedConstAlignedMapType<Stride<Outer, Inner> >::type(data, size, stride); }
641
+ template<int Outer, int Inner>
642
+ static inline typename StridedAlignedMapType<Stride<Outer, Inner> >::type MapAligned(Scalar* data, Index size, const Stride<Outer, Inner>& stride)
643
+ { return typename StridedAlignedMapType<Stride<Outer, Inner> >::type(data, size, stride); }
644
+ template<int Outer, int Inner>
645
+ static inline typename StridedConstAlignedMapType<Stride<Outer, Inner> >::type MapAligned(const Scalar* data, Index rows, Index cols, const Stride<Outer, Inner>& stride)
646
+ { return typename StridedConstAlignedMapType<Stride<Outer, Inner> >::type(data, rows, cols, stride); }
647
+ template<int Outer, int Inner>
648
+ static inline typename StridedAlignedMapType<Stride<Outer, Inner> >::type MapAligned(Scalar* data, Index rows, Index cols, const Stride<Outer, Inner>& stride)
649
+ { return typename StridedAlignedMapType<Stride<Outer, Inner> >::type(data, rows, cols, stride); }
650
+ //@}
651
+
652
+ using Base::setConstant;
653
+ EIGEN_DEVICE_FUNC Derived& setConstant(Index size, const Scalar& val);
654
+ EIGEN_DEVICE_FUNC Derived& setConstant(Index rows, Index cols, const Scalar& val);
655
+
656
+ using Base::setZero;
657
+ EIGEN_DEVICE_FUNC Derived& setZero(Index size);
658
+ EIGEN_DEVICE_FUNC Derived& setZero(Index rows, Index cols);
659
+
660
+ using Base::setOnes;
661
+ EIGEN_DEVICE_FUNC Derived& setOnes(Index size);
662
+ EIGEN_DEVICE_FUNC Derived& setOnes(Index rows, Index cols);
663
+
664
+ using Base::setRandom;
665
+ Derived& setRandom(Index size);
666
+ Derived& setRandom(Index rows, Index cols);
667
+
668
+ #ifdef EIGEN_PLAINOBJECTBASE_PLUGIN
669
+ #include EIGEN_PLAINOBJECTBASE_PLUGIN
670
+ #endif
671
+
672
+ protected:
673
+ /** \internal Resizes *this in preparation for assigning \a other to it.
674
+ * Takes care of doing all the checking that's needed.
675
+ *
676
+ * Note that copying a row-vector into a vector (and conversely) is allowed.
677
+ * The resizing, if any, is then done in the appropriate way so that row-vectors
678
+ * remain row-vectors and vectors remain vectors.
679
+ */
680
+ template<typename OtherDerived>
681
+ EIGEN_DEVICE_FUNC
682
+ EIGEN_STRONG_INLINE void _resize_to_match(const EigenBase<OtherDerived>& other)
683
+ {
684
+ #ifdef EIGEN_NO_AUTOMATIC_RESIZING
685
+ eigen_assert((this->size()==0 || (IsVectorAtCompileTime ? (this->size() == other.size())
686
+ : (rows() == other.rows() && cols() == other.cols())))
687
+ && "Size mismatch. Automatic resizing is disabled because EIGEN_NO_AUTOMATIC_RESIZING is defined");
688
+ EIGEN_ONLY_USED_FOR_DEBUG(other);
689
+ #else
690
+ resizeLike(other);
691
+ #endif
692
+ }
693
+
694
+ /**
695
+ * \brief Copies the value of the expression \a other into \c *this with automatic resizing.
696
+ *
697
+ * *this might be resized to match the dimensions of \a other. If *this was a null matrix (not already initialized),
698
+ * it will be initialized.
699
+ *
700
+ * Note that copying a row-vector into a vector (and conversely) is allowed.
701
+ * The resizing, if any, is then done in the appropriate way so that row-vectors
702
+ * remain row-vectors and vectors remain vectors.
703
+ *
704
+ * \sa operator=(const MatrixBase<OtherDerived>&), _set_noalias()
705
+ *
706
+ * \internal
707
+ */
708
+ // aliasing is dealt once in internall::call_assignment
709
+ // so at this stage we have to assume aliasing... and resising has to be done later.
710
+ template<typename OtherDerived>
711
+ EIGEN_DEVICE_FUNC
712
+ EIGEN_STRONG_INLINE Derived& _set(const DenseBase<OtherDerived>& other)
713
+ {
714
+ internal::call_assignment(this->derived(), other.derived());
715
+ return this->derived();
716
+ }
717
+
718
+ /** \internal Like _set() but additionally makes the assumption that no aliasing effect can happen (which
719
+ * is the case when creating a new matrix) so one can enforce lazy evaluation.
720
+ *
721
+ * \sa operator=(const MatrixBase<OtherDerived>&), _set()
722
+ */
723
+ template<typename OtherDerived>
724
+ EIGEN_DEVICE_FUNC
725
+ EIGEN_STRONG_INLINE Derived& _set_noalias(const DenseBase<OtherDerived>& other)
726
+ {
727
+ // I don't think we need this resize call since the lazyAssign will anyways resize
728
+ // and lazyAssign will be called by the assign selector.
729
+ //_resize_to_match(other);
730
+ // the 'false' below means to enforce lazy evaluation. We don't use lazyAssign() because
731
+ // it wouldn't allow to copy a row-vector into a column-vector.
732
+ internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
733
+ return this->derived();
734
+ }
735
+
736
+ template<typename T0, typename T1>
737
+ EIGEN_DEVICE_FUNC
738
+ EIGEN_STRONG_INLINE void _init2(Index rows, Index cols, typename internal::enable_if<Base::SizeAtCompileTime!=2,T0>::type* = 0)
739
+ {
740
+ EIGEN_STATIC_ASSERT(bool(NumTraits<T0>::IsInteger) &&
741
+ bool(NumTraits<T1>::IsInteger),
742
+ FLOATING_POINT_ARGUMENT_PASSED__INTEGER_WAS_EXPECTED)
743
+ resize(rows,cols);
744
+ }
745
+
746
+ template<typename T0, typename T1>
747
+ EIGEN_DEVICE_FUNC
748
+ EIGEN_STRONG_INLINE void _init2(const T0& val0, const T1& val1, typename internal::enable_if<Base::SizeAtCompileTime==2,T0>::type* = 0)
749
+ {
750
+ EIGEN_STATIC_ASSERT_VECTOR_SPECIFIC_SIZE(PlainObjectBase, 2)
751
+ m_storage.data()[0] = Scalar(val0);
752
+ m_storage.data()[1] = Scalar(val1);
753
+ }
754
+
755
+ template<typename T0, typename T1>
756
+ EIGEN_DEVICE_FUNC
757
+ EIGEN_STRONG_INLINE void _init2(const Index& val0, const Index& val1,
758
+ typename internal::enable_if< (!internal::is_same<Index,Scalar>::value)
759
+ && (internal::is_same<T0,Index>::value)
760
+ && (internal::is_same<T1,Index>::value)
761
+ && Base::SizeAtCompileTime==2,T1>::type* = 0)
762
+ {
763
+ EIGEN_STATIC_ASSERT_VECTOR_SPECIFIC_SIZE(PlainObjectBase, 2)
764
+ m_storage.data()[0] = Scalar(val0);
765
+ m_storage.data()[1] = Scalar(val1);
766
+ }
767
+
768
+ // The argument is convertible to the Index type and we either have a non 1x1 Matrix, or a dynamic-sized Array,
769
+ // then the argument is meant to be the size of the object.
770
+ template<typename T>
771
+ EIGEN_DEVICE_FUNC
772
+ EIGEN_STRONG_INLINE void _init1(Index size, typename internal::enable_if< (Base::SizeAtCompileTime!=1 || !internal::is_convertible<T, Scalar>::value)
773
+ && ((!internal::is_same<typename internal::traits<Derived>::XprKind,ArrayXpr>::value || Base::SizeAtCompileTime==Dynamic)),T>::type* = 0)
774
+ {
775
+ // NOTE MSVC 2008 complains if we directly put bool(NumTraits<T>::IsInteger) as the EIGEN_STATIC_ASSERT argument.
776
+ const bool is_integer = NumTraits<T>::IsInteger;
777
+ EIGEN_UNUSED_VARIABLE(is_integer);
778
+ EIGEN_STATIC_ASSERT(is_integer,
779
+ FLOATING_POINT_ARGUMENT_PASSED__INTEGER_WAS_EXPECTED)
780
+ resize(size);
781
+ }
782
+
783
+ // We have a 1x1 matrix/array => the argument is interpreted as the value of the unique coefficient (case where scalar type can be implicitely converted)
784
+ template<typename T>
785
+ EIGEN_DEVICE_FUNC
786
+ EIGEN_STRONG_INLINE void _init1(const Scalar& val0, typename internal::enable_if<Base::SizeAtCompileTime==1 && internal::is_convertible<T, Scalar>::value,T>::type* = 0)
787
+ {
788
+ EIGEN_STATIC_ASSERT_VECTOR_SPECIFIC_SIZE(PlainObjectBase, 1)
789
+ m_storage.data()[0] = val0;
790
+ }
791
+
792
+ // We have a 1x1 matrix/array => the argument is interpreted as the value of the unique coefficient (case where scalar type match the index type)
793
+ template<typename T>
794
+ EIGEN_DEVICE_FUNC
795
+ EIGEN_STRONG_INLINE void _init1(const Index& val0,
796
+ typename internal::enable_if< (!internal::is_same<Index,Scalar>::value)
797
+ && (internal::is_same<Index,T>::value)
798
+ && Base::SizeAtCompileTime==1
799
+ && internal::is_convertible<T, Scalar>::value,T*>::type* = 0)
800
+ {
801
+ EIGEN_STATIC_ASSERT_VECTOR_SPECIFIC_SIZE(PlainObjectBase, 1)
802
+ m_storage.data()[0] = Scalar(val0);
803
+ }
804
+
805
+ // Initialize a fixed size matrix from a pointer to raw data
806
+ template<typename T>
807
+ EIGEN_DEVICE_FUNC
808
+ EIGEN_STRONG_INLINE void _init1(const Scalar* data){
809
+ this->_set_noalias(ConstMapType(data));
810
+ }
811
+
812
+ // Initialize an arbitrary matrix from a dense expression
813
+ template<typename T, typename OtherDerived>
814
+ EIGEN_DEVICE_FUNC
815
+ EIGEN_STRONG_INLINE void _init1(const DenseBase<OtherDerived>& other){
816
+ this->_set_noalias(other);
817
+ }
818
+
819
+ // Initialize an arbitrary matrix from an object convertible to the Derived type.
820
+ template<typename T>
821
+ EIGEN_DEVICE_FUNC
822
+ EIGEN_STRONG_INLINE void _init1(const Derived& other){
823
+ this->_set_noalias(other);
824
+ }
825
+
826
+ // Initialize an arbitrary matrix from a generic Eigen expression
827
+ template<typename T, typename OtherDerived>
828
+ EIGEN_DEVICE_FUNC
829
+ EIGEN_STRONG_INLINE void _init1(const EigenBase<OtherDerived>& other){
830
+ this->derived() = other;
831
+ }
832
+
833
+ template<typename T, typename OtherDerived>
834
+ EIGEN_DEVICE_FUNC
835
+ EIGEN_STRONG_INLINE void _init1(const ReturnByValue<OtherDerived>& other)
836
+ {
837
+ resize(other.rows(), other.cols());
838
+ other.evalTo(this->derived());
839
+ }
840
+
841
+ template<typename T, typename OtherDerived, int ColsAtCompileTime>
842
+ EIGEN_DEVICE_FUNC
843
+ EIGEN_STRONG_INLINE void _init1(const RotationBase<OtherDerived,ColsAtCompileTime>& r)
844
+ {
845
+ this->derived() = r;
846
+ }
847
+
848
+ // For fixed-size Array<Scalar,...>
849
+ template<typename T>
850
+ EIGEN_DEVICE_FUNC
851
+ EIGEN_STRONG_INLINE void _init1(const Scalar& val0,
852
+ typename internal::enable_if< Base::SizeAtCompileTime!=Dynamic
853
+ && Base::SizeAtCompileTime!=1
854
+ && internal::is_convertible<T, Scalar>::value
855
+ && internal::is_same<typename internal::traits<Derived>::XprKind,ArrayXpr>::value,T>::type* = 0)
856
+ {
857
+ Base::setConstant(val0);
858
+ }
859
+
860
+ // For fixed-size Array<Index,...>
861
+ template<typename T>
862
+ EIGEN_DEVICE_FUNC
863
+ EIGEN_STRONG_INLINE void _init1(const Index& val0,
864
+ typename internal::enable_if< (!internal::is_same<Index,Scalar>::value)
865
+ && (internal::is_same<Index,T>::value)
866
+ && Base::SizeAtCompileTime!=Dynamic
867
+ && Base::SizeAtCompileTime!=1
868
+ && internal::is_convertible<T, Scalar>::value
869
+ && internal::is_same<typename internal::traits<Derived>::XprKind,ArrayXpr>::value,T*>::type* = 0)
870
+ {
871
+ Base::setConstant(val0);
872
+ }
873
+
874
+ template<typename MatrixTypeA, typename MatrixTypeB, bool SwapPointers>
875
+ friend struct internal::matrix_swap_impl;
876
+
877
+ public:
878
+
879
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
880
+ /** \internal
881
+ * \brief Override DenseBase::swap() since for dynamic-sized matrices
882
+ * of same type it is enough to swap the data pointers.
883
+ */
884
+ template<typename OtherDerived>
885
+ EIGEN_DEVICE_FUNC
886
+ void swap(DenseBase<OtherDerived> & other)
887
+ {
888
+ enum { SwapPointers = internal::is_same<Derived, OtherDerived>::value && Base::SizeAtCompileTime==Dynamic };
889
+ internal::matrix_swap_impl<Derived, OtherDerived, bool(SwapPointers)>::run(this->derived(), other.derived());
890
+ }
891
+
892
+ /** \internal
893
+ * \brief const version forwarded to DenseBase::swap
894
+ */
895
+ template<typename OtherDerived>
896
+ EIGEN_DEVICE_FUNC
897
+ void swap(DenseBase<OtherDerived> const & other)
898
+ { Base::swap(other.derived()); }
899
+
900
+ EIGEN_DEVICE_FUNC
901
+ static EIGEN_STRONG_INLINE void _check_template_params()
902
+ {
903
+ EIGEN_STATIC_ASSERT((EIGEN_IMPLIES(MaxRowsAtCompileTime==1 && MaxColsAtCompileTime!=1, (Options&RowMajor)==RowMajor)
904
+ && EIGEN_IMPLIES(MaxColsAtCompileTime==1 && MaxRowsAtCompileTime!=1, (Options&RowMajor)==0)
905
+ && ((RowsAtCompileTime == Dynamic) || (RowsAtCompileTime >= 0))
906
+ && ((ColsAtCompileTime == Dynamic) || (ColsAtCompileTime >= 0))
907
+ && ((MaxRowsAtCompileTime == Dynamic) || (MaxRowsAtCompileTime >= 0))
908
+ && ((MaxColsAtCompileTime == Dynamic) || (MaxColsAtCompileTime >= 0))
909
+ && (MaxRowsAtCompileTime == RowsAtCompileTime || RowsAtCompileTime==Dynamic)
910
+ && (MaxColsAtCompileTime == ColsAtCompileTime || ColsAtCompileTime==Dynamic)
911
+ && (Options & (DontAlign|RowMajor)) == Options),
912
+ INVALID_MATRIX_TEMPLATE_PARAMETERS)
913
+ }
914
+
915
+ enum { IsPlainObjectBase = 1 };
916
+ #endif
917
+ };
918
+
919
+ namespace internal {
920
+
921
+ template <typename Derived, typename OtherDerived, bool IsVector>
922
+ struct conservative_resize_like_impl
923
+ {
924
+ static void run(DenseBase<Derived>& _this, Index rows, Index cols)
925
+ {
926
+ if (_this.rows() == rows && _this.cols() == cols) return;
927
+ EIGEN_STATIC_ASSERT_DYNAMIC_SIZE(Derived)
928
+
929
+ if ( ( Derived::IsRowMajor && _this.cols() == cols) || // row-major and we change only the number of rows
930
+ (!Derived::IsRowMajor && _this.rows() == rows) ) // column-major and we change only the number of columns
931
+ {
932
+ internal::check_rows_cols_for_overflow<Derived::MaxSizeAtCompileTime>::run(rows, cols);
933
+ _this.derived().m_storage.conservativeResize(rows*cols,rows,cols);
934
+ }
935
+ else
936
+ {
937
+ // The storage order does not allow us to use reallocation.
938
+ typename Derived::PlainObject tmp(rows,cols);
939
+ const Index common_rows = numext::mini(rows, _this.rows());
940
+ const Index common_cols = numext::mini(cols, _this.cols());
941
+ tmp.block(0,0,common_rows,common_cols) = _this.block(0,0,common_rows,common_cols);
942
+ _this.derived().swap(tmp);
943
+ }
944
+ }
945
+
946
+ static void run(DenseBase<Derived>& _this, const DenseBase<OtherDerived>& other)
947
+ {
948
+ if (_this.rows() == other.rows() && _this.cols() == other.cols()) return;
949
+
950
+ // Note: Here is space for improvement. Basically, for conservativeResize(Index,Index),
951
+ // neither RowsAtCompileTime or ColsAtCompileTime must be Dynamic. If only one of the
952
+ // dimensions is dynamic, one could use either conservativeResize(Index rows, NoChange_t) or
953
+ // conservativeResize(NoChange_t, Index cols). For these methods new static asserts like
954
+ // EIGEN_STATIC_ASSERT_DYNAMIC_ROWS and EIGEN_STATIC_ASSERT_DYNAMIC_COLS would be good.
955
+ EIGEN_STATIC_ASSERT_DYNAMIC_SIZE(Derived)
956
+ EIGEN_STATIC_ASSERT_DYNAMIC_SIZE(OtherDerived)
957
+
958
+ if ( ( Derived::IsRowMajor && _this.cols() == other.cols()) || // row-major and we change only the number of rows
959
+ (!Derived::IsRowMajor && _this.rows() == other.rows()) ) // column-major and we change only the number of columns
960
+ {
961
+ const Index new_rows = other.rows() - _this.rows();
962
+ const Index new_cols = other.cols() - _this.cols();
963
+ _this.derived().m_storage.conservativeResize(other.size(),other.rows(),other.cols());
964
+ if (new_rows>0)
965
+ _this.bottomRightCorner(new_rows, other.cols()) = other.bottomRows(new_rows);
966
+ else if (new_cols>0)
967
+ _this.bottomRightCorner(other.rows(), new_cols) = other.rightCols(new_cols);
968
+ }
969
+ else
970
+ {
971
+ // The storage order does not allow us to use reallocation.
972
+ typename Derived::PlainObject tmp(other);
973
+ const Index common_rows = numext::mini(tmp.rows(), _this.rows());
974
+ const Index common_cols = numext::mini(tmp.cols(), _this.cols());
975
+ tmp.block(0,0,common_rows,common_cols) = _this.block(0,0,common_rows,common_cols);
976
+ _this.derived().swap(tmp);
977
+ }
978
+ }
979
+ };
980
+
981
+ // Here, the specialization for vectors inherits from the general matrix case
982
+ // to allow calling .conservativeResize(rows,cols) on vectors.
983
+ template <typename Derived, typename OtherDerived>
984
+ struct conservative_resize_like_impl<Derived,OtherDerived,true>
985
+ : conservative_resize_like_impl<Derived,OtherDerived,false>
986
+ {
987
+ using conservative_resize_like_impl<Derived,OtherDerived,false>::run;
988
+
989
+ static void run(DenseBase<Derived>& _this, Index size)
990
+ {
991
+ const Index new_rows = Derived::RowsAtCompileTime==1 ? 1 : size;
992
+ const Index new_cols = Derived::RowsAtCompileTime==1 ? size : 1;
993
+ _this.derived().m_storage.conservativeResize(size,new_rows,new_cols);
994
+ }
995
+
996
+ static void run(DenseBase<Derived>& _this, const DenseBase<OtherDerived>& other)
997
+ {
998
+ if (_this.rows() == other.rows() && _this.cols() == other.cols()) return;
999
+
1000
+ const Index num_new_elements = other.size() - _this.size();
1001
+
1002
+ const Index new_rows = Derived::RowsAtCompileTime==1 ? 1 : other.rows();
1003
+ const Index new_cols = Derived::RowsAtCompileTime==1 ? other.cols() : 1;
1004
+ _this.derived().m_storage.conservativeResize(other.size(),new_rows,new_cols);
1005
+
1006
+ if (num_new_elements > 0)
1007
+ _this.tail(num_new_elements) = other.tail(num_new_elements);
1008
+ }
1009
+ };
1010
+
1011
+ template<typename MatrixTypeA, typename MatrixTypeB, bool SwapPointers>
1012
+ struct matrix_swap_impl
1013
+ {
1014
+ EIGEN_DEVICE_FUNC
1015
+ static inline void run(MatrixTypeA& a, MatrixTypeB& b)
1016
+ {
1017
+ a.base().swap(b);
1018
+ }
1019
+ };
1020
+
1021
+ template<typename MatrixTypeA, typename MatrixTypeB>
1022
+ struct matrix_swap_impl<MatrixTypeA, MatrixTypeB, true>
1023
+ {
1024
+ EIGEN_DEVICE_FUNC
1025
+ static inline void run(MatrixTypeA& a, MatrixTypeB& b)
1026
+ {
1027
+ static_cast<typename MatrixTypeA::Base&>(a).m_storage.swap(static_cast<typename MatrixTypeB::Base&>(b).m_storage);
1028
+ }
1029
+ };
1030
+
1031
+ } // end namespace internal
1032
+
1033
+ } // end namespace Eigen
1034
+
1035
+ #endif // EIGEN_DENSESTORAGEBASE_H