tomoto 0.1.0
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE.txt +22 -0
- data/README.md +123 -0
- data/ext/tomoto/ext.cpp +245 -0
- data/ext/tomoto/extconf.rb +28 -0
- data/lib/tomoto.rb +12 -0
- data/lib/tomoto/ct.rb +11 -0
- data/lib/tomoto/hdp.rb +11 -0
- data/lib/tomoto/lda.rb +67 -0
- data/lib/tomoto/version.rb +3 -0
- data/vendor/EigenRand/EigenRand/Core.h +1139 -0
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
- data/vendor/EigenRand/EigenRand/EigenRand +19 -0
- data/vendor/EigenRand/EigenRand/Macro.h +24 -0
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
- data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
- data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
- data/vendor/EigenRand/EigenRand/doc.h +220 -0
- data/vendor/EigenRand/LICENSE +21 -0
- data/vendor/EigenRand/README.md +288 -0
- data/vendor/eigen/COPYING.BSD +26 -0
- data/vendor/eigen/COPYING.GPL +674 -0
- data/vendor/eigen/COPYING.LGPL +502 -0
- data/vendor/eigen/COPYING.MINPACK +52 -0
- data/vendor/eigen/COPYING.MPL2 +373 -0
- data/vendor/eigen/COPYING.README +18 -0
- data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
- data/vendor/eigen/Eigen/Cholesky +46 -0
- data/vendor/eigen/Eigen/CholmodSupport +48 -0
- data/vendor/eigen/Eigen/Core +537 -0
- data/vendor/eigen/Eigen/Dense +7 -0
- data/vendor/eigen/Eigen/Eigen +2 -0
- data/vendor/eigen/Eigen/Eigenvalues +61 -0
- data/vendor/eigen/Eigen/Geometry +62 -0
- data/vendor/eigen/Eigen/Householder +30 -0
- data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/eigen/Eigen/Jacobi +33 -0
- data/vendor/eigen/Eigen/LU +50 -0
- data/vendor/eigen/Eigen/MetisSupport +35 -0
- data/vendor/eigen/Eigen/OrderingMethods +73 -0
- data/vendor/eigen/Eigen/PaStiXSupport +48 -0
- data/vendor/eigen/Eigen/PardisoSupport +35 -0
- data/vendor/eigen/Eigen/QR +51 -0
- data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
- data/vendor/eigen/Eigen/SPQRSupport +34 -0
- data/vendor/eigen/Eigen/SVD +51 -0
- data/vendor/eigen/Eigen/Sparse +36 -0
- data/vendor/eigen/Eigen/SparseCholesky +45 -0
- data/vendor/eigen/Eigen/SparseCore +69 -0
- data/vendor/eigen/Eigen/SparseLU +46 -0
- data/vendor/eigen/Eigen/SparseQR +37 -0
- data/vendor/eigen/Eigen/StdDeque +27 -0
- data/vendor/eigen/Eigen/StdList +26 -0
- data/vendor/eigen/Eigen/StdVector +27 -0
- data/vendor/eigen/Eigen/SuperLUSupport +64 -0
- data/vendor/eigen/Eigen/UmfPackSupport +40 -0
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
- data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
- data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
- data/vendor/eigen/Eigen/src/Core/EigenBase.h +159 -0
- data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +146 -0
- data/vendor/eigen/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
- data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +593 -0
- data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +187 -0
- data/vendor/eigen/Eigen/src/Core/IO.h +225 -0
- data/vendor/eigen/Eigen/src/Core/Inverse.h +118 -0
- data/vendor/eigen/Eigen/src/Core/Map.h +171 -0
- data/vendor/eigen/Eigen/src/Core/MapBase.h +303 -0
- data/vendor/eigen/Eigen/src/Core/MathFunctions.h +1415 -0
- data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +101 -0
- data/vendor/eigen/Eigen/src/Core/Matrix.h +459 -0
- data/vendor/eigen/Eigen/src/Core/MatrixBase.h +529 -0
- data/vendor/eigen/Eigen/src/Core/NestByValue.h +110 -0
- data/vendor/eigen/Eigen/src/Core/NoAlias.h +108 -0
- data/vendor/eigen/Eigen/src/Core/NumTraits.h +248 -0
- data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +633 -0
- data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +1035 -0
- data/vendor/eigen/Eigen/src/Core/Product.h +186 -0
- data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +1112 -0
- data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
- data/vendor/eigen/Eigen/src/Core/Redux.h +505 -0
- data/vendor/eigen/Eigen/src/Core/Ref.h +283 -0
- data/vendor/eigen/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +117 -0
- data/vendor/eigen/Eigen/src/Core/Reverse.h +211 -0
- data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
- data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +352 -0
- data/vendor/eigen/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/eigen/Eigen/src/Core/Solve.h +188 -0
- data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/eigen/Eigen/src/Core/SolverBase.h +130 -0
- data/vendor/eigen/Eigen/src/Core/StableNorm.h +221 -0
- data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
- data/vendor/eigen/Eigen/src/Core/Swap.h +67 -0
- data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
- data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +674 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
- data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +335 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +145 -0
- data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +398 -0
- data/vendor/eigen/Eigen/src/Core/util/Constants.h +547 -0
- data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +83 -0
- data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
- data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +130 -0
- data/vendor/eigen/Eigen/src/Core/util/Macros.h +1001 -0
- data/vendor/eigen/Eigen/src/Core/util/Memory.h +993 -0
- data/vendor/eigen/Eigen/src/Core/util/Meta.h +534 -0
- data/vendor/eigen/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +27 -0
- data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +218 -0
- data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +821 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +459 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +654 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +546 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +870 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +556 -0
- data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +392 -0
- data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +497 -0
- data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +234 -0
- data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +195 -0
- data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +814 -0
- data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/eigen/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/eigen/Eigen/src/Geometry/Scaling.h +170 -0
- data/vendor/eigen/Eigen/src/Geometry/Transform.h +1542 -0
- data/vendor/eigen/Eigen/src/Geometry/Translation.h +208 -0
- data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +161 -0
- data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +103 -0
- data/vendor/eigen/Eigen/src/Householder/Householder.h +172 -0
- data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +470 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +228 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +246 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +400 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +462 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +394 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +216 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +115 -0
- data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +462 -0
- data/vendor/eigen/Eigen/src/LU/Determinant.h +101 -0
- data/vendor/eigen/Eigen/src/LU/FullPivLU.h +891 -0
- data/vendor/eigen/Eigen/src/LU/InverseImpl.h +415 -0
- data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +611 -0
- data/vendor/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +338 -0
- data/vendor/eigen/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +445 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +1843 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +157 -0
- data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +543 -0
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +653 -0
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +562 -0
- data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +676 -0
- data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +409 -0
- data/vendor/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +313 -0
- data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +1246 -0
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +804 -0
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/eigen/Eigen/src/SVD/SVDBase.h +315 -0
- data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +689 -0
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
- data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +377 -0
- data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +258 -0
- data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +216 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +603 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +341 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +726 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +148 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +320 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +1403 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +405 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +169 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +656 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +178 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +253 -0
- data/vendor/eigen/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +773 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +301 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +745 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +126 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/eigen/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
- data/vendor/eigen/Eigen/src/misc/Image.h +82 -0
- data/vendor/eigen/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
- data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
- data/vendor/eigen/Eigen/src/misc/lapacke.h +16291 -0
- data/vendor/eigen/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +332 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +552 -0
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +1058 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +163 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +85 -0
- data/vendor/eigen/README.md +3 -0
- data/vendor/eigen/bench/README.txt +55 -0
- data/vendor/eigen/bench/btl/COPYING +340 -0
- data/vendor/eigen/bench/btl/README +154 -0
- data/vendor/eigen/bench/tensors/README +21 -0
- data/vendor/eigen/blas/README.txt +6 -0
- data/vendor/eigen/demos/mandelbrot/README +10 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +9 -0
- data/vendor/eigen/demos/opengl/README +13 -0
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +1760 -0
- data/vendor/eigen/unsupported/README.txt +50 -0
- data/vendor/tomotopy/LICENSE +21 -0
- data/vendor/tomotopy/README.kr.rst +375 -0
- data/vendor/tomotopy/README.rst +382 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
- data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
- data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
- data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +374 -0
- data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
- data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.cpp +15 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
- data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
- data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
- data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
- data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +588 -0
- data/vendor/tomotopy/src/TopicModel/LDA.h +144 -0
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
- data/vendor/tomotopy/src/TopicModel/LLDA.h +45 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +203 -0
- data/vendor/tomotopy/src/TopicModel/MGLDA.h +63 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +558 -0
- data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
- data/vendor/tomotopy/src/TopicModel/PLDA.h +17 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +214 -0
- data/vendor/tomotopy/src/TopicModel/SLDA.h +54 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +456 -0
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +692 -0
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +169 -0
- data/vendor/tomotopy/src/Utils/Dictionary.h +80 -0
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +181 -0
- data/vendor/tomotopy/src/Utils/LBFGS.h +202 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h +120 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h +122 -0
- data/vendor/tomotopy/src/Utils/LBFGS/Param.h +213 -0
- data/vendor/tomotopy/src/Utils/LUT.hpp +82 -0
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
- data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
- data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
- data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
- data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
- data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
- data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
- data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
- data/vendor/tomotopy/src/Utils/exception.h +28 -0
- data/vendor/tomotopy/src/Utils/math.h +281 -0
- data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
- data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
- data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
- data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
- data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
- data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
- data/vendor/tomotopy/src/Utils/text.hpp +49 -0
- data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
- metadata +531 -0
@@ -0,0 +1,83 @@
|
|
1
|
+
#ifndef EIGEN_WARNINGS_DISABLED
|
2
|
+
#define EIGEN_WARNINGS_DISABLED
|
3
|
+
|
4
|
+
#ifdef _MSC_VER
|
5
|
+
// 4100 - unreferenced formal parameter (occurred e.g. in aligned_allocator::destroy(pointer p))
|
6
|
+
// 4101 - unreferenced local variable
|
7
|
+
// 4127 - conditional expression is constant
|
8
|
+
// 4181 - qualifier applied to reference type ignored
|
9
|
+
// 4211 - nonstandard extension used : redefined extern to static
|
10
|
+
// 4244 - 'argument' : conversion from 'type1' to 'type2', possible loss of data
|
11
|
+
// 4273 - QtAlignedMalloc, inconsistent DLL linkage
|
12
|
+
// 4324 - structure was padded due to declspec(align())
|
13
|
+
// 4503 - decorated name length exceeded, name was truncated
|
14
|
+
// 4512 - assignment operator could not be generated
|
15
|
+
// 4522 - 'class' : multiple assignment operators specified
|
16
|
+
// 4700 - uninitialized local variable 'xyz' used
|
17
|
+
// 4714 - function marked as __forceinline not inlined
|
18
|
+
// 4717 - 'function' : recursive on all control paths, function will cause runtime stack overflow
|
19
|
+
// 4800 - 'type' : forcing value to bool 'true' or 'false' (performance warning)
|
20
|
+
#ifndef EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS
|
21
|
+
#pragma warning( push )
|
22
|
+
#endif
|
23
|
+
#pragma warning( disable : 4100 4101 4127 4181 4211 4244 4273 4324 4503 4512 4522 4700 4714 4717 4800)
|
24
|
+
|
25
|
+
#elif defined __INTEL_COMPILER
|
26
|
+
// 2196 - routine is both "inline" and "noinline" ("noinline" assumed)
|
27
|
+
// ICC 12 generates this warning even without any inline keyword, when defining class methods 'inline' i.e. inside of class body
|
28
|
+
// typedef that may be a reference type.
|
29
|
+
// 279 - controlling expression is constant
|
30
|
+
// ICC 12 generates this warning on assert(constant_expression_depending_on_template_params) and frankly this is a legitimate use case.
|
31
|
+
// 1684 - conversion from pointer to same-sized integral type (potential portability problem)
|
32
|
+
// 2259 - non-pointer conversion from "Eigen::Index={ptrdiff_t={long}}" to "int" may lose significant bits
|
33
|
+
#ifndef EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS
|
34
|
+
#pragma warning push
|
35
|
+
#endif
|
36
|
+
#pragma warning disable 2196 279 1684 2259
|
37
|
+
|
38
|
+
#elif defined __clang__
|
39
|
+
// -Wconstant-logical-operand - warning: use of logical && with constant operand; switch to bitwise & or remove constant
|
40
|
+
// this is really a stupid warning as it warns on compile-time expressions involving enums
|
41
|
+
#ifndef EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS
|
42
|
+
#pragma clang diagnostic push
|
43
|
+
#endif
|
44
|
+
#pragma clang diagnostic ignored "-Wconstant-logical-operand"
|
45
|
+
|
46
|
+
#elif defined __GNUC__
|
47
|
+
|
48
|
+
#if (!defined(EIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS)) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6))
|
49
|
+
#pragma GCC diagnostic push
|
50
|
+
#endif
|
51
|
+
// g++ warns about local variables shadowing member functions, which is too strict
|
52
|
+
#pragma GCC diagnostic ignored "-Wshadow"
|
53
|
+
#if __GNUC__ == 4 && __GNUC_MINOR__ < 8
|
54
|
+
// Until g++-4.7 there are warnings when comparing unsigned int vs 0, even in templated functions:
|
55
|
+
#pragma GCC diagnostic ignored "-Wtype-limits"
|
56
|
+
#endif
|
57
|
+
#if __GNUC__>=6
|
58
|
+
#pragma GCC diagnostic ignored "-Wignored-attributes"
|
59
|
+
#endif
|
60
|
+
|
61
|
+
#endif
|
62
|
+
|
63
|
+
#if defined __NVCC__
|
64
|
+
// Disable the "statement is unreachable" message
|
65
|
+
#pragma diag_suppress code_is_unreachable
|
66
|
+
// Disable the "dynamic initialization in unreachable code" message
|
67
|
+
#pragma diag_suppress initialization_not_reachable
|
68
|
+
// Disable the "invalid error number" message that we get with older versions of nvcc
|
69
|
+
#pragma diag_suppress 1222
|
70
|
+
// Disable the "calling a __host__ function from a __host__ __device__ function is not allowed" messages (yes, there are many of them and they seem to change with every version of the compiler)
|
71
|
+
#pragma diag_suppress 2527
|
72
|
+
#pragma diag_suppress 2529
|
73
|
+
#pragma diag_suppress 2651
|
74
|
+
#pragma diag_suppress 2653
|
75
|
+
#pragma diag_suppress 2668
|
76
|
+
#pragma diag_suppress 2669
|
77
|
+
#pragma diag_suppress 2670
|
78
|
+
#pragma diag_suppress 2671
|
79
|
+
#pragma diag_suppress 2735
|
80
|
+
#pragma diag_suppress 2737
|
81
|
+
#endif
|
82
|
+
|
83
|
+
#endif // not EIGEN_WARNINGS_DISABLED
|
@@ -0,0 +1,302 @@
|
|
1
|
+
// This file is part of Eigen, a lightweight C++ template library
|
2
|
+
// for linear algebra.
|
3
|
+
//
|
4
|
+
// Copyright (C) 2007-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
|
5
|
+
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
|
6
|
+
//
|
7
|
+
// This Source Code Form is subject to the terms of the Mozilla
|
8
|
+
// Public License v. 2.0. If a copy of the MPL was not distributed
|
9
|
+
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
|
10
|
+
|
11
|
+
#ifndef EIGEN_FORWARDDECLARATIONS_H
|
12
|
+
#define EIGEN_FORWARDDECLARATIONS_H
|
13
|
+
|
14
|
+
namespace Eigen {
|
15
|
+
namespace internal {
|
16
|
+
|
17
|
+
template<typename T> struct traits;
|
18
|
+
|
19
|
+
// here we say once and for all that traits<const T> == traits<T>
|
20
|
+
// When constness must affect traits, it has to be constness on template parameters on which T itself depends.
|
21
|
+
// For example, traits<Map<const T> > != traits<Map<T> >, but
|
22
|
+
// traits<const Map<T> > == traits<Map<T> >
|
23
|
+
template<typename T> struct traits<const T> : traits<T> {};
|
24
|
+
|
25
|
+
template<typename Derived> struct has_direct_access
|
26
|
+
{
|
27
|
+
enum { ret = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0 };
|
28
|
+
};
|
29
|
+
|
30
|
+
template<typename Derived> struct accessors_level
|
31
|
+
{
|
32
|
+
enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0,
|
33
|
+
has_write_access = (traits<Derived>::Flags & LvalueBit) ? 1 : 0,
|
34
|
+
value = has_direct_access ? (has_write_access ? DirectWriteAccessors : DirectAccessors)
|
35
|
+
: (has_write_access ? WriteAccessors : ReadOnlyAccessors)
|
36
|
+
};
|
37
|
+
};
|
38
|
+
|
39
|
+
template<typename T> struct evaluator_traits;
|
40
|
+
|
41
|
+
template< typename T> struct evaluator;
|
42
|
+
|
43
|
+
} // end namespace internal
|
44
|
+
|
45
|
+
template<typename T> struct NumTraits;
|
46
|
+
|
47
|
+
template<typename Derived> struct EigenBase;
|
48
|
+
template<typename Derived> class DenseBase;
|
49
|
+
template<typename Derived> class PlainObjectBase;
|
50
|
+
|
51
|
+
|
52
|
+
template<typename Derived,
|
53
|
+
int Level = internal::accessors_level<Derived>::value >
|
54
|
+
class DenseCoeffsBase;
|
55
|
+
|
56
|
+
template<typename _Scalar, int _Rows, int _Cols,
|
57
|
+
int _Options = AutoAlign |
|
58
|
+
#if EIGEN_GNUC_AT(3,4)
|
59
|
+
// workaround a bug in at least gcc 3.4.6
|
60
|
+
// the innermost ?: ternary operator is misparsed. We write it slightly
|
61
|
+
// differently and this makes gcc 3.4.6 happy, but it's ugly.
|
62
|
+
// The error would only show up with EIGEN_DEFAULT_TO_ROW_MAJOR is defined
|
63
|
+
// (when EIGEN_DEFAULT_MATRIX_STORAGE_ORDER_OPTION is RowMajor)
|
64
|
+
( (_Rows==1 && _Cols!=1) ? Eigen::RowMajor
|
65
|
+
: !(_Cols==1 && _Rows!=1) ? EIGEN_DEFAULT_MATRIX_STORAGE_ORDER_OPTION
|
66
|
+
: Eigen::ColMajor ),
|
67
|
+
#else
|
68
|
+
( (_Rows==1 && _Cols!=1) ? Eigen::RowMajor
|
69
|
+
: (_Cols==1 && _Rows!=1) ? Eigen::ColMajor
|
70
|
+
: EIGEN_DEFAULT_MATRIX_STORAGE_ORDER_OPTION ),
|
71
|
+
#endif
|
72
|
+
int _MaxRows = _Rows,
|
73
|
+
int _MaxCols = _Cols
|
74
|
+
> class Matrix;
|
75
|
+
|
76
|
+
template<typename Derived> class MatrixBase;
|
77
|
+
template<typename Derived> class ArrayBase;
|
78
|
+
|
79
|
+
template<typename ExpressionType, unsigned int Added, unsigned int Removed> class Flagged;
|
80
|
+
template<typename ExpressionType, template <typename> class StorageBase > class NoAlias;
|
81
|
+
template<typename ExpressionType> class NestByValue;
|
82
|
+
template<typename ExpressionType> class ForceAlignedAccess;
|
83
|
+
template<typename ExpressionType> class SwapWrapper;
|
84
|
+
|
85
|
+
template<typename XprType, int BlockRows=Dynamic, int BlockCols=Dynamic, bool InnerPanel = false> class Block;
|
86
|
+
|
87
|
+
template<typename MatrixType, int Size=Dynamic> class VectorBlock;
|
88
|
+
template<typename MatrixType> class Transpose;
|
89
|
+
template<typename MatrixType> class Conjugate;
|
90
|
+
template<typename NullaryOp, typename MatrixType> class CwiseNullaryOp;
|
91
|
+
template<typename UnaryOp, typename MatrixType> class CwiseUnaryOp;
|
92
|
+
template<typename ViewOp, typename MatrixType> class CwiseUnaryView;
|
93
|
+
template<typename BinaryOp, typename Lhs, typename Rhs> class CwiseBinaryOp;
|
94
|
+
template<typename TernaryOp, typename Arg1, typename Arg2, typename Arg3> class CwiseTernaryOp;
|
95
|
+
template<typename Decomposition, typename Rhstype> class Solve;
|
96
|
+
template<typename XprType> class Inverse;
|
97
|
+
|
98
|
+
template<typename Lhs, typename Rhs, int Option = DefaultProduct> class Product;
|
99
|
+
|
100
|
+
template<typename Derived> class DiagonalBase;
|
101
|
+
template<typename _DiagonalVectorType> class DiagonalWrapper;
|
102
|
+
template<typename _Scalar, int SizeAtCompileTime, int MaxSizeAtCompileTime=SizeAtCompileTime> class DiagonalMatrix;
|
103
|
+
template<typename MatrixType, typename DiagonalType, int ProductOrder> class DiagonalProduct;
|
104
|
+
template<typename MatrixType, int Index = 0> class Diagonal;
|
105
|
+
template<int SizeAtCompileTime, int MaxSizeAtCompileTime = SizeAtCompileTime, typename IndexType=int> class PermutationMatrix;
|
106
|
+
template<int SizeAtCompileTime, int MaxSizeAtCompileTime = SizeAtCompileTime, typename IndexType=int> class Transpositions;
|
107
|
+
template<typename Derived> class PermutationBase;
|
108
|
+
template<typename Derived> class TranspositionsBase;
|
109
|
+
template<typename _IndicesType> class PermutationWrapper;
|
110
|
+
template<typename _IndicesType> class TranspositionsWrapper;
|
111
|
+
|
112
|
+
template<typename Derived,
|
113
|
+
int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors
|
114
|
+
> class MapBase;
|
115
|
+
template<int InnerStrideAtCompileTime, int OuterStrideAtCompileTime> class Stride;
|
116
|
+
template<int Value = Dynamic> class InnerStride;
|
117
|
+
template<int Value = Dynamic> class OuterStride;
|
118
|
+
template<typename MatrixType, int MapOptions=Unaligned, typename StrideType = Stride<0,0> > class Map;
|
119
|
+
template<typename Derived> class RefBase;
|
120
|
+
template<typename PlainObjectType, int Options = 0,
|
121
|
+
typename StrideType = typename internal::conditional<PlainObjectType::IsVectorAtCompileTime,InnerStride<1>,OuterStride<> >::type > class Ref;
|
122
|
+
|
123
|
+
template<typename Derived> class TriangularBase;
|
124
|
+
template<typename MatrixType, unsigned int Mode> class TriangularView;
|
125
|
+
template<typename MatrixType, unsigned int Mode> class SelfAdjointView;
|
126
|
+
template<typename MatrixType> class SparseView;
|
127
|
+
template<typename ExpressionType> class WithFormat;
|
128
|
+
template<typename MatrixType> struct CommaInitializer;
|
129
|
+
template<typename Derived> class ReturnByValue;
|
130
|
+
template<typename ExpressionType> class ArrayWrapper;
|
131
|
+
template<typename ExpressionType> class MatrixWrapper;
|
132
|
+
template<typename Derived> class SolverBase;
|
133
|
+
template<typename XprType> class InnerIterator;
|
134
|
+
|
135
|
+
namespace internal {
|
136
|
+
template<typename DecompositionType> struct kernel_retval_base;
|
137
|
+
template<typename DecompositionType> struct kernel_retval;
|
138
|
+
template<typename DecompositionType> struct image_retval_base;
|
139
|
+
template<typename DecompositionType> struct image_retval;
|
140
|
+
} // end namespace internal
|
141
|
+
|
142
|
+
namespace internal {
|
143
|
+
template<typename _Scalar, int Rows=Dynamic, int Cols=Dynamic, int Supers=Dynamic, int Subs=Dynamic, int Options=0> class BandMatrix;
|
144
|
+
}
|
145
|
+
|
146
|
+
namespace internal {
|
147
|
+
template<typename Lhs, typename Rhs> struct product_type;
|
148
|
+
|
149
|
+
template<bool> struct EnableIf;
|
150
|
+
|
151
|
+
/** \internal
|
152
|
+
* \class product_evaluator
|
153
|
+
* Products need their own evaluator with more template arguments allowing for
|
154
|
+
* easier partial template specializations.
|
155
|
+
*/
|
156
|
+
template< typename T,
|
157
|
+
int ProductTag = internal::product_type<typename T::Lhs,typename T::Rhs>::ret,
|
158
|
+
typename LhsShape = typename evaluator_traits<typename T::Lhs>::Shape,
|
159
|
+
typename RhsShape = typename evaluator_traits<typename T::Rhs>::Shape,
|
160
|
+
typename LhsScalar = typename traits<typename T::Lhs>::Scalar,
|
161
|
+
typename RhsScalar = typename traits<typename T::Rhs>::Scalar
|
162
|
+
> struct product_evaluator;
|
163
|
+
}
|
164
|
+
|
165
|
+
template<typename Lhs, typename Rhs,
|
166
|
+
int ProductType = internal::product_type<Lhs,Rhs>::value>
|
167
|
+
struct ProductReturnType;
|
168
|
+
|
169
|
+
// this is a workaround for sun CC
|
170
|
+
template<typename Lhs, typename Rhs> struct LazyProductReturnType;
|
171
|
+
|
172
|
+
namespace internal {
|
173
|
+
|
174
|
+
// Provides scalar/packet-wise product and product with accumulation
|
175
|
+
// with optional conjugation of the arguments.
|
176
|
+
template<typename LhsScalar, typename RhsScalar, bool ConjLhs=false, bool ConjRhs=false> struct conj_helper;
|
177
|
+
|
178
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_sum_op;
|
179
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_difference_op;
|
180
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_conj_product_op;
|
181
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_min_op;
|
182
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_max_op;
|
183
|
+
template<typename Scalar> struct scalar_opposite_op;
|
184
|
+
template<typename Scalar> struct scalar_conjugate_op;
|
185
|
+
template<typename Scalar> struct scalar_real_op;
|
186
|
+
template<typename Scalar> struct scalar_imag_op;
|
187
|
+
template<typename Scalar> struct scalar_abs_op;
|
188
|
+
template<typename Scalar> struct scalar_abs2_op;
|
189
|
+
template<typename Scalar> struct scalar_sqrt_op;
|
190
|
+
template<typename Scalar> struct scalar_rsqrt_op;
|
191
|
+
template<typename Scalar> struct scalar_exp_op;
|
192
|
+
template<typename Scalar> struct scalar_log_op;
|
193
|
+
template<typename Scalar> struct scalar_cos_op;
|
194
|
+
template<typename Scalar> struct scalar_sin_op;
|
195
|
+
template<typename Scalar> struct scalar_acos_op;
|
196
|
+
template<typename Scalar> struct scalar_asin_op;
|
197
|
+
template<typename Scalar> struct scalar_tan_op;
|
198
|
+
template<typename Scalar> struct scalar_inverse_op;
|
199
|
+
template<typename Scalar> struct scalar_square_op;
|
200
|
+
template<typename Scalar> struct scalar_cube_op;
|
201
|
+
template<typename Scalar, typename NewType> struct scalar_cast_op;
|
202
|
+
template<typename Scalar> struct scalar_random_op;
|
203
|
+
template<typename Scalar> struct scalar_constant_op;
|
204
|
+
template<typename Scalar> struct scalar_identity_op;
|
205
|
+
template<typename Scalar,bool iscpx> struct scalar_sign_op;
|
206
|
+
template<typename Scalar,typename ScalarExponent> struct scalar_pow_op;
|
207
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_hypot_op;
|
208
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_product_op;
|
209
|
+
template<typename LhsScalar,typename RhsScalar=LhsScalar> struct scalar_quotient_op;
|
210
|
+
|
211
|
+
// SpecialFunctions module
|
212
|
+
template<typename Scalar> struct scalar_lgamma_op;
|
213
|
+
template<typename Scalar> struct scalar_digamma_op;
|
214
|
+
template<typename Scalar> struct scalar_erf_op;
|
215
|
+
template<typename Scalar> struct scalar_erfc_op;
|
216
|
+
template<typename Scalar> struct scalar_igamma_op;
|
217
|
+
template<typename Scalar> struct scalar_igammac_op;
|
218
|
+
template<typename Scalar> struct scalar_zeta_op;
|
219
|
+
template<typename Scalar> struct scalar_betainc_op;
|
220
|
+
|
221
|
+
} // end namespace internal
|
222
|
+
|
223
|
+
struct IOFormat;
|
224
|
+
|
225
|
+
// Array module
|
226
|
+
template<typename _Scalar, int _Rows, int _Cols,
|
227
|
+
int _Options = AutoAlign |
|
228
|
+
#if EIGEN_GNUC_AT(3,4)
|
229
|
+
// workaround a bug in at least gcc 3.4.6
|
230
|
+
// the innermost ?: ternary operator is misparsed. We write it slightly
|
231
|
+
// differently and this makes gcc 3.4.6 happy, but it's ugly.
|
232
|
+
// The error would only show up with EIGEN_DEFAULT_TO_ROW_MAJOR is defined
|
233
|
+
// (when EIGEN_DEFAULT_MATRIX_STORAGE_ORDER_OPTION is RowMajor)
|
234
|
+
( (_Rows==1 && _Cols!=1) ? Eigen::RowMajor
|
235
|
+
: !(_Cols==1 && _Rows!=1) ? EIGEN_DEFAULT_MATRIX_STORAGE_ORDER_OPTION
|
236
|
+
: Eigen::ColMajor ),
|
237
|
+
#else
|
238
|
+
( (_Rows==1 && _Cols!=1) ? Eigen::RowMajor
|
239
|
+
: (_Cols==1 && _Rows!=1) ? Eigen::ColMajor
|
240
|
+
: EIGEN_DEFAULT_MATRIX_STORAGE_ORDER_OPTION ),
|
241
|
+
#endif
|
242
|
+
int _MaxRows = _Rows, int _MaxCols = _Cols> class Array;
|
243
|
+
template<typename ConditionMatrixType, typename ThenMatrixType, typename ElseMatrixType> class Select;
|
244
|
+
template<typename MatrixType, typename BinaryOp, int Direction> class PartialReduxExpr;
|
245
|
+
template<typename ExpressionType, int Direction> class VectorwiseOp;
|
246
|
+
template<typename MatrixType,int RowFactor,int ColFactor> class Replicate;
|
247
|
+
template<typename MatrixType, int Direction = BothDirections> class Reverse;
|
248
|
+
|
249
|
+
template<typename MatrixType> class FullPivLU;
|
250
|
+
template<typename MatrixType> class PartialPivLU;
|
251
|
+
namespace internal {
|
252
|
+
template<typename MatrixType> struct inverse_impl;
|
253
|
+
}
|
254
|
+
template<typename MatrixType> class HouseholderQR;
|
255
|
+
template<typename MatrixType> class ColPivHouseholderQR;
|
256
|
+
template<typename MatrixType> class FullPivHouseholderQR;
|
257
|
+
template<typename MatrixType> class CompleteOrthogonalDecomposition;
|
258
|
+
template<typename MatrixType, int QRPreconditioner = ColPivHouseholderQRPreconditioner> class JacobiSVD;
|
259
|
+
template<typename MatrixType> class BDCSVD;
|
260
|
+
template<typename MatrixType, int UpLo = Lower> class LLT;
|
261
|
+
template<typename MatrixType, int UpLo = Lower> class LDLT;
|
262
|
+
template<typename VectorsType, typename CoeffsType, int Side=OnTheLeft> class HouseholderSequence;
|
263
|
+
template<typename Scalar> class JacobiRotation;
|
264
|
+
|
265
|
+
// Geometry module:
|
266
|
+
template<typename Derived, int _Dim> class RotationBase;
|
267
|
+
template<typename Lhs, typename Rhs> class Cross;
|
268
|
+
template<typename Derived> class QuaternionBase;
|
269
|
+
template<typename Scalar> class Rotation2D;
|
270
|
+
template<typename Scalar> class AngleAxis;
|
271
|
+
template<typename Scalar,int Dim> class Translation;
|
272
|
+
template<typename Scalar,int Dim> class AlignedBox;
|
273
|
+
template<typename Scalar, int Options = AutoAlign> class Quaternion;
|
274
|
+
template<typename Scalar,int Dim,int Mode,int _Options=AutoAlign> class Transform;
|
275
|
+
template <typename _Scalar, int _AmbientDim, int Options=AutoAlign> class ParametrizedLine;
|
276
|
+
template <typename _Scalar, int _AmbientDim, int Options=AutoAlign> class Hyperplane;
|
277
|
+
template<typename Scalar> class UniformScaling;
|
278
|
+
template<typename MatrixType,int Direction> class Homogeneous;
|
279
|
+
|
280
|
+
// Sparse module:
|
281
|
+
template<typename Derived> class SparseMatrixBase;
|
282
|
+
|
283
|
+
// MatrixFunctions module
|
284
|
+
template<typename Derived> struct MatrixExponentialReturnValue;
|
285
|
+
template<typename Derived> class MatrixFunctionReturnValue;
|
286
|
+
template<typename Derived> class MatrixSquareRootReturnValue;
|
287
|
+
template<typename Derived> class MatrixLogarithmReturnValue;
|
288
|
+
template<typename Derived> class MatrixPowerReturnValue;
|
289
|
+
template<typename Derived> class MatrixComplexPowerReturnValue;
|
290
|
+
|
291
|
+
namespace internal {
|
292
|
+
template <typename Scalar>
|
293
|
+
struct stem_function
|
294
|
+
{
|
295
|
+
typedef std::complex<typename NumTraits<Scalar>::Real> ComplexScalar;
|
296
|
+
typedef ComplexScalar type(ComplexScalar, int);
|
297
|
+
};
|
298
|
+
}
|
299
|
+
|
300
|
+
} // end namespace Eigen
|
301
|
+
|
302
|
+
#endif // EIGEN_FORWARDDECLARATIONS_H
|
@@ -0,0 +1,130 @@
|
|
1
|
+
/*
|
2
|
+
Copyright (c) 2011, Intel Corporation. All rights reserved.
|
3
|
+
|
4
|
+
Redistribution and use in source and binary forms, with or without modification,
|
5
|
+
are permitted provided that the following conditions are met:
|
6
|
+
|
7
|
+
* Redistributions of source code must retain the above copyright notice, this
|
8
|
+
list of conditions and the following disclaimer.
|
9
|
+
* Redistributions in binary form must reproduce the above copyright notice,
|
10
|
+
this list of conditions and the following disclaimer in the documentation
|
11
|
+
and/or other materials provided with the distribution.
|
12
|
+
* Neither the name of Intel Corporation nor the names of its contributors may
|
13
|
+
be used to endorse or promote products derived from this software without
|
14
|
+
specific prior written permission.
|
15
|
+
|
16
|
+
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
|
17
|
+
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
|
18
|
+
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
|
19
|
+
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
|
20
|
+
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
|
21
|
+
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
|
22
|
+
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
|
23
|
+
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
|
24
|
+
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
|
25
|
+
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
26
|
+
|
27
|
+
********************************************************************************
|
28
|
+
* Content : Eigen bindings to Intel(R) MKL
|
29
|
+
* Include file with common MKL declarations
|
30
|
+
********************************************************************************
|
31
|
+
*/
|
32
|
+
|
33
|
+
#ifndef EIGEN_MKL_SUPPORT_H
|
34
|
+
#define EIGEN_MKL_SUPPORT_H
|
35
|
+
|
36
|
+
#ifdef EIGEN_USE_MKL_ALL
|
37
|
+
#ifndef EIGEN_USE_BLAS
|
38
|
+
#define EIGEN_USE_BLAS
|
39
|
+
#endif
|
40
|
+
#ifndef EIGEN_USE_LAPACKE
|
41
|
+
#define EIGEN_USE_LAPACKE
|
42
|
+
#endif
|
43
|
+
#ifndef EIGEN_USE_MKL_VML
|
44
|
+
#define EIGEN_USE_MKL_VML
|
45
|
+
#endif
|
46
|
+
#endif
|
47
|
+
|
48
|
+
#ifdef EIGEN_USE_LAPACKE_STRICT
|
49
|
+
#define EIGEN_USE_LAPACKE
|
50
|
+
#endif
|
51
|
+
|
52
|
+
#if defined(EIGEN_USE_MKL_VML) && !defined(EIGEN_USE_MKL)
|
53
|
+
#define EIGEN_USE_MKL
|
54
|
+
#endif
|
55
|
+
|
56
|
+
|
57
|
+
#if defined EIGEN_USE_MKL
|
58
|
+
# include <mkl.h>
|
59
|
+
/*Check IMKL version for compatibility: < 10.3 is not usable with Eigen*/
|
60
|
+
# ifndef INTEL_MKL_VERSION
|
61
|
+
# undef EIGEN_USE_MKL /* INTEL_MKL_VERSION is not even defined on older versions */
|
62
|
+
# elif INTEL_MKL_VERSION < 100305 /* the intel-mkl-103-release-notes say this was when the lapacke.h interface was added*/
|
63
|
+
# undef EIGEN_USE_MKL
|
64
|
+
# endif
|
65
|
+
# ifndef EIGEN_USE_MKL
|
66
|
+
/*If the MKL version is too old, undef everything*/
|
67
|
+
# undef EIGEN_USE_MKL_ALL
|
68
|
+
# undef EIGEN_USE_LAPACKE
|
69
|
+
# undef EIGEN_USE_MKL_VML
|
70
|
+
# undef EIGEN_USE_LAPACKE_STRICT
|
71
|
+
# undef EIGEN_USE_LAPACKE
|
72
|
+
# endif
|
73
|
+
#endif
|
74
|
+
|
75
|
+
#if defined EIGEN_USE_MKL
|
76
|
+
|
77
|
+
#define EIGEN_MKL_VML_THRESHOLD 128
|
78
|
+
|
79
|
+
/* MKL_DOMAIN_BLAS, etc are defined only in 10.3 update 7 */
|
80
|
+
/* MKL_BLAS, etc are not defined in 11.2 */
|
81
|
+
#ifdef MKL_DOMAIN_ALL
|
82
|
+
#define EIGEN_MKL_DOMAIN_ALL MKL_DOMAIN_ALL
|
83
|
+
#else
|
84
|
+
#define EIGEN_MKL_DOMAIN_ALL MKL_ALL
|
85
|
+
#endif
|
86
|
+
|
87
|
+
#ifdef MKL_DOMAIN_BLAS
|
88
|
+
#define EIGEN_MKL_DOMAIN_BLAS MKL_DOMAIN_BLAS
|
89
|
+
#else
|
90
|
+
#define EIGEN_MKL_DOMAIN_BLAS MKL_BLAS
|
91
|
+
#endif
|
92
|
+
|
93
|
+
#ifdef MKL_DOMAIN_FFT
|
94
|
+
#define EIGEN_MKL_DOMAIN_FFT MKL_DOMAIN_FFT
|
95
|
+
#else
|
96
|
+
#define EIGEN_MKL_DOMAIN_FFT MKL_FFT
|
97
|
+
#endif
|
98
|
+
|
99
|
+
#ifdef MKL_DOMAIN_VML
|
100
|
+
#define EIGEN_MKL_DOMAIN_VML MKL_DOMAIN_VML
|
101
|
+
#else
|
102
|
+
#define EIGEN_MKL_DOMAIN_VML MKL_VML
|
103
|
+
#endif
|
104
|
+
|
105
|
+
#ifdef MKL_DOMAIN_PARDISO
|
106
|
+
#define EIGEN_MKL_DOMAIN_PARDISO MKL_DOMAIN_PARDISO
|
107
|
+
#else
|
108
|
+
#define EIGEN_MKL_DOMAIN_PARDISO MKL_PARDISO
|
109
|
+
#endif
|
110
|
+
#endif
|
111
|
+
|
112
|
+
#if defined(EIGEN_USE_BLAS) && !defined(EIGEN_USE_MKL)
|
113
|
+
#include "../../misc/blas.h"
|
114
|
+
#endif
|
115
|
+
|
116
|
+
namespace Eigen {
|
117
|
+
|
118
|
+
typedef std::complex<double> dcomplex;
|
119
|
+
typedef std::complex<float> scomplex;
|
120
|
+
|
121
|
+
#if defined(EIGEN_USE_MKL)
|
122
|
+
typedef MKL_INT BlasIndex;
|
123
|
+
#else
|
124
|
+
typedef int BlasIndex;
|
125
|
+
#endif
|
126
|
+
|
127
|
+
} // end namespace Eigen
|
128
|
+
|
129
|
+
|
130
|
+
#endif // EIGEN_MKL_SUPPORT_H
|