tomoto 0.1.0
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE.txt +22 -0
- data/README.md +123 -0
- data/ext/tomoto/ext.cpp +245 -0
- data/ext/tomoto/extconf.rb +28 -0
- data/lib/tomoto.rb +12 -0
- data/lib/tomoto/ct.rb +11 -0
- data/lib/tomoto/hdp.rb +11 -0
- data/lib/tomoto/lda.rb +67 -0
- data/lib/tomoto/version.rb +3 -0
- data/vendor/EigenRand/EigenRand/Core.h +1139 -0
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
- data/vendor/EigenRand/EigenRand/EigenRand +19 -0
- data/vendor/EigenRand/EigenRand/Macro.h +24 -0
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
- data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
- data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
- data/vendor/EigenRand/EigenRand/doc.h +220 -0
- data/vendor/EigenRand/LICENSE +21 -0
- data/vendor/EigenRand/README.md +288 -0
- data/vendor/eigen/COPYING.BSD +26 -0
- data/vendor/eigen/COPYING.GPL +674 -0
- data/vendor/eigen/COPYING.LGPL +502 -0
- data/vendor/eigen/COPYING.MINPACK +52 -0
- data/vendor/eigen/COPYING.MPL2 +373 -0
- data/vendor/eigen/COPYING.README +18 -0
- data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
- data/vendor/eigen/Eigen/Cholesky +46 -0
- data/vendor/eigen/Eigen/CholmodSupport +48 -0
- data/vendor/eigen/Eigen/Core +537 -0
- data/vendor/eigen/Eigen/Dense +7 -0
- data/vendor/eigen/Eigen/Eigen +2 -0
- data/vendor/eigen/Eigen/Eigenvalues +61 -0
- data/vendor/eigen/Eigen/Geometry +62 -0
- data/vendor/eigen/Eigen/Householder +30 -0
- data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/eigen/Eigen/Jacobi +33 -0
- data/vendor/eigen/Eigen/LU +50 -0
- data/vendor/eigen/Eigen/MetisSupport +35 -0
- data/vendor/eigen/Eigen/OrderingMethods +73 -0
- data/vendor/eigen/Eigen/PaStiXSupport +48 -0
- data/vendor/eigen/Eigen/PardisoSupport +35 -0
- data/vendor/eigen/Eigen/QR +51 -0
- data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
- data/vendor/eigen/Eigen/SPQRSupport +34 -0
- data/vendor/eigen/Eigen/SVD +51 -0
- data/vendor/eigen/Eigen/Sparse +36 -0
- data/vendor/eigen/Eigen/SparseCholesky +45 -0
- data/vendor/eigen/Eigen/SparseCore +69 -0
- data/vendor/eigen/Eigen/SparseLU +46 -0
- data/vendor/eigen/Eigen/SparseQR +37 -0
- data/vendor/eigen/Eigen/StdDeque +27 -0
- data/vendor/eigen/Eigen/StdList +26 -0
- data/vendor/eigen/Eigen/StdVector +27 -0
- data/vendor/eigen/Eigen/SuperLUSupport +64 -0
- data/vendor/eigen/Eigen/UmfPackSupport +40 -0
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
- data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
- data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
- data/vendor/eigen/Eigen/src/Core/EigenBase.h +159 -0
- data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +146 -0
- data/vendor/eigen/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
- data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +593 -0
- data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +187 -0
- data/vendor/eigen/Eigen/src/Core/IO.h +225 -0
- data/vendor/eigen/Eigen/src/Core/Inverse.h +118 -0
- data/vendor/eigen/Eigen/src/Core/Map.h +171 -0
- data/vendor/eigen/Eigen/src/Core/MapBase.h +303 -0
- data/vendor/eigen/Eigen/src/Core/MathFunctions.h +1415 -0
- data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +101 -0
- data/vendor/eigen/Eigen/src/Core/Matrix.h +459 -0
- data/vendor/eigen/Eigen/src/Core/MatrixBase.h +529 -0
- data/vendor/eigen/Eigen/src/Core/NestByValue.h +110 -0
- data/vendor/eigen/Eigen/src/Core/NoAlias.h +108 -0
- data/vendor/eigen/Eigen/src/Core/NumTraits.h +248 -0
- data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +633 -0
- data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +1035 -0
- data/vendor/eigen/Eigen/src/Core/Product.h +186 -0
- data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +1112 -0
- data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
- data/vendor/eigen/Eigen/src/Core/Redux.h +505 -0
- data/vendor/eigen/Eigen/src/Core/Ref.h +283 -0
- data/vendor/eigen/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +117 -0
- data/vendor/eigen/Eigen/src/Core/Reverse.h +211 -0
- data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
- data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +352 -0
- data/vendor/eigen/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/eigen/Eigen/src/Core/Solve.h +188 -0
- data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/eigen/Eigen/src/Core/SolverBase.h +130 -0
- data/vendor/eigen/Eigen/src/Core/StableNorm.h +221 -0
- data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
- data/vendor/eigen/Eigen/src/Core/Swap.h +67 -0
- data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
- data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +674 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
- data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +335 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +145 -0
- data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +398 -0
- data/vendor/eigen/Eigen/src/Core/util/Constants.h +547 -0
- data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +83 -0
- data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
- data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +130 -0
- data/vendor/eigen/Eigen/src/Core/util/Macros.h +1001 -0
- data/vendor/eigen/Eigen/src/Core/util/Memory.h +993 -0
- data/vendor/eigen/Eigen/src/Core/util/Meta.h +534 -0
- data/vendor/eigen/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +27 -0
- data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +218 -0
- data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +821 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +459 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +654 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +546 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +870 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +556 -0
- data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +392 -0
- data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +497 -0
- data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +234 -0
- data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +195 -0
- data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +814 -0
- data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/eigen/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/eigen/Eigen/src/Geometry/Scaling.h +170 -0
- data/vendor/eigen/Eigen/src/Geometry/Transform.h +1542 -0
- data/vendor/eigen/Eigen/src/Geometry/Translation.h +208 -0
- data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +161 -0
- data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +103 -0
- data/vendor/eigen/Eigen/src/Householder/Householder.h +172 -0
- data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +470 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +228 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +246 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +400 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +462 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +394 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +216 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +115 -0
- data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +462 -0
- data/vendor/eigen/Eigen/src/LU/Determinant.h +101 -0
- data/vendor/eigen/Eigen/src/LU/FullPivLU.h +891 -0
- data/vendor/eigen/Eigen/src/LU/InverseImpl.h +415 -0
- data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +611 -0
- data/vendor/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +338 -0
- data/vendor/eigen/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +445 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +1843 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +157 -0
- data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +543 -0
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +653 -0
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +562 -0
- data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +676 -0
- data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +409 -0
- data/vendor/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +313 -0
- data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +1246 -0
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +804 -0
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/eigen/Eigen/src/SVD/SVDBase.h +315 -0
- data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +689 -0
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
- data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +377 -0
- data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +258 -0
- data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +216 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +603 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +341 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +726 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +148 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +320 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +1403 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +405 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +169 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +656 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +178 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +253 -0
- data/vendor/eigen/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +773 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +301 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +745 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +126 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/eigen/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
- data/vendor/eigen/Eigen/src/misc/Image.h +82 -0
- data/vendor/eigen/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
- data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
- data/vendor/eigen/Eigen/src/misc/lapacke.h +16291 -0
- data/vendor/eigen/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +332 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +552 -0
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +1058 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +163 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +85 -0
- data/vendor/eigen/README.md +3 -0
- data/vendor/eigen/bench/README.txt +55 -0
- data/vendor/eigen/bench/btl/COPYING +340 -0
- data/vendor/eigen/bench/btl/README +154 -0
- data/vendor/eigen/bench/tensors/README +21 -0
- data/vendor/eigen/blas/README.txt +6 -0
- data/vendor/eigen/demos/mandelbrot/README +10 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +9 -0
- data/vendor/eigen/demos/opengl/README +13 -0
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +1760 -0
- data/vendor/eigen/unsupported/README.txt +50 -0
- data/vendor/tomotopy/LICENSE +21 -0
- data/vendor/tomotopy/README.kr.rst +375 -0
- data/vendor/tomotopy/README.rst +382 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
- data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
- data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
- data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +374 -0
- data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
- data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.cpp +15 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
- data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
- data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
- data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
- data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +588 -0
- data/vendor/tomotopy/src/TopicModel/LDA.h +144 -0
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
- data/vendor/tomotopy/src/TopicModel/LLDA.h +45 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +203 -0
- data/vendor/tomotopy/src/TopicModel/MGLDA.h +63 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +558 -0
- data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
- data/vendor/tomotopy/src/TopicModel/PLDA.h +17 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +214 -0
- data/vendor/tomotopy/src/TopicModel/SLDA.h +54 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +456 -0
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +692 -0
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +169 -0
- data/vendor/tomotopy/src/Utils/Dictionary.h +80 -0
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +181 -0
- data/vendor/tomotopy/src/Utils/LBFGS.h +202 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h +120 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h +122 -0
- data/vendor/tomotopy/src/Utils/LBFGS/Param.h +213 -0
- data/vendor/tomotopy/src/Utils/LUT.hpp +82 -0
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
- data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
- data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
- data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
- data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
- data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
- data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
- data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
- data/vendor/tomotopy/src/Utils/exception.h +28 -0
- data/vendor/tomotopy/src/Utils/math.h +281 -0
- data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
- data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
- data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
- data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
- data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
- data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
- data/vendor/tomotopy/src/Utils/text.hpp +49 -0
- data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
- metadata +531 -0
@@ -0,0 +1,374 @@
|
|
1
|
+
// This file is part of Eigen, a lightweight C++ template library
|
2
|
+
// for linear algebra.
|
3
|
+
//
|
4
|
+
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
|
5
|
+
// Copyright (C) 2010 Jitse Niesen <jitse@maths.leeds.ac.uk>
|
6
|
+
//
|
7
|
+
// This Source Code Form is subject to the terms of the Mozilla
|
8
|
+
// Public License v. 2.0. If a copy of the MPL was not distributed
|
9
|
+
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
|
10
|
+
|
11
|
+
#ifndef EIGEN_HESSENBERGDECOMPOSITION_H
|
12
|
+
#define EIGEN_HESSENBERGDECOMPOSITION_H
|
13
|
+
|
14
|
+
namespace Eigen {
|
15
|
+
|
16
|
+
namespace internal {
|
17
|
+
|
18
|
+
template<typename MatrixType> struct HessenbergDecompositionMatrixHReturnType;
|
19
|
+
template<typename MatrixType>
|
20
|
+
struct traits<HessenbergDecompositionMatrixHReturnType<MatrixType> >
|
21
|
+
{
|
22
|
+
typedef MatrixType ReturnType;
|
23
|
+
};
|
24
|
+
|
25
|
+
}
|
26
|
+
|
27
|
+
/** \eigenvalues_module \ingroup Eigenvalues_Module
|
28
|
+
*
|
29
|
+
*
|
30
|
+
* \class HessenbergDecomposition
|
31
|
+
*
|
32
|
+
* \brief Reduces a square matrix to Hessenberg form by an orthogonal similarity transformation
|
33
|
+
*
|
34
|
+
* \tparam _MatrixType the type of the matrix of which we are computing the Hessenberg decomposition
|
35
|
+
*
|
36
|
+
* This class performs an Hessenberg decomposition of a matrix \f$ A \f$. In
|
37
|
+
* the real case, the Hessenberg decomposition consists of an orthogonal
|
38
|
+
* matrix \f$ Q \f$ and a Hessenberg matrix \f$ H \f$ such that \f$ A = Q H
|
39
|
+
* Q^T \f$. An orthogonal matrix is a matrix whose inverse equals its
|
40
|
+
* transpose (\f$ Q^{-1} = Q^T \f$). A Hessenberg matrix has zeros below the
|
41
|
+
* subdiagonal, so it is almost upper triangular. The Hessenberg decomposition
|
42
|
+
* of a complex matrix is \f$ A = Q H Q^* \f$ with \f$ Q \f$ unitary (that is,
|
43
|
+
* \f$ Q^{-1} = Q^* \f$).
|
44
|
+
*
|
45
|
+
* Call the function compute() to compute the Hessenberg decomposition of a
|
46
|
+
* given matrix. Alternatively, you can use the
|
47
|
+
* HessenbergDecomposition(const MatrixType&) constructor which computes the
|
48
|
+
* Hessenberg decomposition at construction time. Once the decomposition is
|
49
|
+
* computed, you can use the matrixH() and matrixQ() functions to construct
|
50
|
+
* the matrices H and Q in the decomposition.
|
51
|
+
*
|
52
|
+
* The documentation for matrixH() contains an example of the typical use of
|
53
|
+
* this class.
|
54
|
+
*
|
55
|
+
* \sa class ComplexSchur, class Tridiagonalization, \ref QR_Module "QR Module"
|
56
|
+
*/
|
57
|
+
template<typename _MatrixType> class HessenbergDecomposition
|
58
|
+
{
|
59
|
+
public:
|
60
|
+
|
61
|
+
/** \brief Synonym for the template parameter \p _MatrixType. */
|
62
|
+
typedef _MatrixType MatrixType;
|
63
|
+
|
64
|
+
enum {
|
65
|
+
Size = MatrixType::RowsAtCompileTime,
|
66
|
+
SizeMinusOne = Size == Dynamic ? Dynamic : Size - 1,
|
67
|
+
Options = MatrixType::Options,
|
68
|
+
MaxSize = MatrixType::MaxRowsAtCompileTime,
|
69
|
+
MaxSizeMinusOne = MaxSize == Dynamic ? Dynamic : MaxSize - 1
|
70
|
+
};
|
71
|
+
|
72
|
+
/** \brief Scalar type for matrices of type #MatrixType. */
|
73
|
+
typedef typename MatrixType::Scalar Scalar;
|
74
|
+
typedef Eigen::Index Index; ///< \deprecated since Eigen 3.3
|
75
|
+
|
76
|
+
/** \brief Type for vector of Householder coefficients.
|
77
|
+
*
|
78
|
+
* This is column vector with entries of type #Scalar. The length of the
|
79
|
+
* vector is one less than the size of #MatrixType, if it is a fixed-side
|
80
|
+
* type.
|
81
|
+
*/
|
82
|
+
typedef Matrix<Scalar, SizeMinusOne, 1, Options & ~RowMajor, MaxSizeMinusOne, 1> CoeffVectorType;
|
83
|
+
|
84
|
+
/** \brief Return type of matrixQ() */
|
85
|
+
typedef HouseholderSequence<MatrixType,typename internal::remove_all<typename CoeffVectorType::ConjugateReturnType>::type> HouseholderSequenceType;
|
86
|
+
|
87
|
+
typedef internal::HessenbergDecompositionMatrixHReturnType<MatrixType> MatrixHReturnType;
|
88
|
+
|
89
|
+
/** \brief Default constructor; the decomposition will be computed later.
|
90
|
+
*
|
91
|
+
* \param [in] size The size of the matrix whose Hessenberg decomposition will be computed.
|
92
|
+
*
|
93
|
+
* The default constructor is useful in cases in which the user intends to
|
94
|
+
* perform decompositions via compute(). The \p size parameter is only
|
95
|
+
* used as a hint. It is not an error to give a wrong \p size, but it may
|
96
|
+
* impair performance.
|
97
|
+
*
|
98
|
+
* \sa compute() for an example.
|
99
|
+
*/
|
100
|
+
explicit HessenbergDecomposition(Index size = Size==Dynamic ? 2 : Size)
|
101
|
+
: m_matrix(size,size),
|
102
|
+
m_temp(size),
|
103
|
+
m_isInitialized(false)
|
104
|
+
{
|
105
|
+
if(size>1)
|
106
|
+
m_hCoeffs.resize(size-1);
|
107
|
+
}
|
108
|
+
|
109
|
+
/** \brief Constructor; computes Hessenberg decomposition of given matrix.
|
110
|
+
*
|
111
|
+
* \param[in] matrix Square matrix whose Hessenberg decomposition is to be computed.
|
112
|
+
*
|
113
|
+
* This constructor calls compute() to compute the Hessenberg
|
114
|
+
* decomposition.
|
115
|
+
*
|
116
|
+
* \sa matrixH() for an example.
|
117
|
+
*/
|
118
|
+
template<typename InputType>
|
119
|
+
explicit HessenbergDecomposition(const EigenBase<InputType>& matrix)
|
120
|
+
: m_matrix(matrix.derived()),
|
121
|
+
m_temp(matrix.rows()),
|
122
|
+
m_isInitialized(false)
|
123
|
+
{
|
124
|
+
if(matrix.rows()<2)
|
125
|
+
{
|
126
|
+
m_isInitialized = true;
|
127
|
+
return;
|
128
|
+
}
|
129
|
+
m_hCoeffs.resize(matrix.rows()-1,1);
|
130
|
+
_compute(m_matrix, m_hCoeffs, m_temp);
|
131
|
+
m_isInitialized = true;
|
132
|
+
}
|
133
|
+
|
134
|
+
/** \brief Computes Hessenberg decomposition of given matrix.
|
135
|
+
*
|
136
|
+
* \param[in] matrix Square matrix whose Hessenberg decomposition is to be computed.
|
137
|
+
* \returns Reference to \c *this
|
138
|
+
*
|
139
|
+
* The Hessenberg decomposition is computed by bringing the columns of the
|
140
|
+
* matrix successively in the required form using Householder reflections
|
141
|
+
* (see, e.g., Algorithm 7.4.2 in Golub \& Van Loan, <i>%Matrix
|
142
|
+
* Computations</i>). The cost is \f$ 10n^3/3 \f$ flops, where \f$ n \f$
|
143
|
+
* denotes the size of the given matrix.
|
144
|
+
*
|
145
|
+
* This method reuses of the allocated data in the HessenbergDecomposition
|
146
|
+
* object.
|
147
|
+
*
|
148
|
+
* Example: \include HessenbergDecomposition_compute.cpp
|
149
|
+
* Output: \verbinclude HessenbergDecomposition_compute.out
|
150
|
+
*/
|
151
|
+
template<typename InputType>
|
152
|
+
HessenbergDecomposition& compute(const EigenBase<InputType>& matrix)
|
153
|
+
{
|
154
|
+
m_matrix = matrix.derived();
|
155
|
+
if(matrix.rows()<2)
|
156
|
+
{
|
157
|
+
m_isInitialized = true;
|
158
|
+
return *this;
|
159
|
+
}
|
160
|
+
m_hCoeffs.resize(matrix.rows()-1,1);
|
161
|
+
_compute(m_matrix, m_hCoeffs, m_temp);
|
162
|
+
m_isInitialized = true;
|
163
|
+
return *this;
|
164
|
+
}
|
165
|
+
|
166
|
+
/** \brief Returns the Householder coefficients.
|
167
|
+
*
|
168
|
+
* \returns a const reference to the vector of Householder coefficients
|
169
|
+
*
|
170
|
+
* \pre Either the constructor HessenbergDecomposition(const MatrixType&)
|
171
|
+
* or the member function compute(const MatrixType&) has been called
|
172
|
+
* before to compute the Hessenberg decomposition of a matrix.
|
173
|
+
*
|
174
|
+
* The Householder coefficients allow the reconstruction of the matrix
|
175
|
+
* \f$ Q \f$ in the Hessenberg decomposition from the packed data.
|
176
|
+
*
|
177
|
+
* \sa packedMatrix(), \ref Householder_Module "Householder module"
|
178
|
+
*/
|
179
|
+
const CoeffVectorType& householderCoefficients() const
|
180
|
+
{
|
181
|
+
eigen_assert(m_isInitialized && "HessenbergDecomposition is not initialized.");
|
182
|
+
return m_hCoeffs;
|
183
|
+
}
|
184
|
+
|
185
|
+
/** \brief Returns the internal representation of the decomposition
|
186
|
+
*
|
187
|
+
* \returns a const reference to a matrix with the internal representation
|
188
|
+
* of the decomposition.
|
189
|
+
*
|
190
|
+
* \pre Either the constructor HessenbergDecomposition(const MatrixType&)
|
191
|
+
* or the member function compute(const MatrixType&) has been called
|
192
|
+
* before to compute the Hessenberg decomposition of a matrix.
|
193
|
+
*
|
194
|
+
* The returned matrix contains the following information:
|
195
|
+
* - the upper part and lower sub-diagonal represent the Hessenberg matrix H
|
196
|
+
* - the rest of the lower part contains the Householder vectors that, combined with
|
197
|
+
* Householder coefficients returned by householderCoefficients(),
|
198
|
+
* allows to reconstruct the matrix Q as
|
199
|
+
* \f$ Q = H_{N-1} \ldots H_1 H_0 \f$.
|
200
|
+
* Here, the matrices \f$ H_i \f$ are the Householder transformations
|
201
|
+
* \f$ H_i = (I - h_i v_i v_i^T) \f$
|
202
|
+
* where \f$ h_i \f$ is the \f$ i \f$th Householder coefficient and
|
203
|
+
* \f$ v_i \f$ is the Householder vector defined by
|
204
|
+
* \f$ v_i = [ 0, \ldots, 0, 1, M(i+2,i), \ldots, M(N-1,i) ]^T \f$
|
205
|
+
* with M the matrix returned by this function.
|
206
|
+
*
|
207
|
+
* See LAPACK for further details on this packed storage.
|
208
|
+
*
|
209
|
+
* Example: \include HessenbergDecomposition_packedMatrix.cpp
|
210
|
+
* Output: \verbinclude HessenbergDecomposition_packedMatrix.out
|
211
|
+
*
|
212
|
+
* \sa householderCoefficients()
|
213
|
+
*/
|
214
|
+
const MatrixType& packedMatrix() const
|
215
|
+
{
|
216
|
+
eigen_assert(m_isInitialized && "HessenbergDecomposition is not initialized.");
|
217
|
+
return m_matrix;
|
218
|
+
}
|
219
|
+
|
220
|
+
/** \brief Reconstructs the orthogonal matrix Q in the decomposition
|
221
|
+
*
|
222
|
+
* \returns object representing the matrix Q
|
223
|
+
*
|
224
|
+
* \pre Either the constructor HessenbergDecomposition(const MatrixType&)
|
225
|
+
* or the member function compute(const MatrixType&) has been called
|
226
|
+
* before to compute the Hessenberg decomposition of a matrix.
|
227
|
+
*
|
228
|
+
* This function returns a light-weight object of template class
|
229
|
+
* HouseholderSequence. You can either apply it directly to a matrix or
|
230
|
+
* you can convert it to a matrix of type #MatrixType.
|
231
|
+
*
|
232
|
+
* \sa matrixH() for an example, class HouseholderSequence
|
233
|
+
*/
|
234
|
+
HouseholderSequenceType matrixQ() const
|
235
|
+
{
|
236
|
+
eigen_assert(m_isInitialized && "HessenbergDecomposition is not initialized.");
|
237
|
+
return HouseholderSequenceType(m_matrix, m_hCoeffs.conjugate())
|
238
|
+
.setLength(m_matrix.rows() - 1)
|
239
|
+
.setShift(1);
|
240
|
+
}
|
241
|
+
|
242
|
+
/** \brief Constructs the Hessenberg matrix H in the decomposition
|
243
|
+
*
|
244
|
+
* \returns expression object representing the matrix H
|
245
|
+
*
|
246
|
+
* \pre Either the constructor HessenbergDecomposition(const MatrixType&)
|
247
|
+
* or the member function compute(const MatrixType&) has been called
|
248
|
+
* before to compute the Hessenberg decomposition of a matrix.
|
249
|
+
*
|
250
|
+
* The object returned by this function constructs the Hessenberg matrix H
|
251
|
+
* when it is assigned to a matrix or otherwise evaluated. The matrix H is
|
252
|
+
* constructed from the packed matrix as returned by packedMatrix(): The
|
253
|
+
* upper part (including the subdiagonal) of the packed matrix contains
|
254
|
+
* the matrix H. It may sometimes be better to directly use the packed
|
255
|
+
* matrix instead of constructing the matrix H.
|
256
|
+
*
|
257
|
+
* Example: \include HessenbergDecomposition_matrixH.cpp
|
258
|
+
* Output: \verbinclude HessenbergDecomposition_matrixH.out
|
259
|
+
*
|
260
|
+
* \sa matrixQ(), packedMatrix()
|
261
|
+
*/
|
262
|
+
MatrixHReturnType matrixH() const
|
263
|
+
{
|
264
|
+
eigen_assert(m_isInitialized && "HessenbergDecomposition is not initialized.");
|
265
|
+
return MatrixHReturnType(*this);
|
266
|
+
}
|
267
|
+
|
268
|
+
private:
|
269
|
+
|
270
|
+
typedef Matrix<Scalar, 1, Size, Options | RowMajor, 1, MaxSize> VectorType;
|
271
|
+
typedef typename NumTraits<Scalar>::Real RealScalar;
|
272
|
+
static void _compute(MatrixType& matA, CoeffVectorType& hCoeffs, VectorType& temp);
|
273
|
+
|
274
|
+
protected:
|
275
|
+
MatrixType m_matrix;
|
276
|
+
CoeffVectorType m_hCoeffs;
|
277
|
+
VectorType m_temp;
|
278
|
+
bool m_isInitialized;
|
279
|
+
};
|
280
|
+
|
281
|
+
/** \internal
|
282
|
+
* Performs a tridiagonal decomposition of \a matA in place.
|
283
|
+
*
|
284
|
+
* \param matA the input selfadjoint matrix
|
285
|
+
* \param hCoeffs returned Householder coefficients
|
286
|
+
*
|
287
|
+
* The result is written in the lower triangular part of \a matA.
|
288
|
+
*
|
289
|
+
* Implemented from Golub's "%Matrix Computations", algorithm 8.3.1.
|
290
|
+
*
|
291
|
+
* \sa packedMatrix()
|
292
|
+
*/
|
293
|
+
template<typename MatrixType>
|
294
|
+
void HessenbergDecomposition<MatrixType>::_compute(MatrixType& matA, CoeffVectorType& hCoeffs, VectorType& temp)
|
295
|
+
{
|
296
|
+
eigen_assert(matA.rows()==matA.cols());
|
297
|
+
Index n = matA.rows();
|
298
|
+
temp.resize(n);
|
299
|
+
for (Index i = 0; i<n-1; ++i)
|
300
|
+
{
|
301
|
+
// let's consider the vector v = i-th column starting at position i+1
|
302
|
+
Index remainingSize = n-i-1;
|
303
|
+
RealScalar beta;
|
304
|
+
Scalar h;
|
305
|
+
matA.col(i).tail(remainingSize).makeHouseholderInPlace(h, beta);
|
306
|
+
matA.col(i).coeffRef(i+1) = beta;
|
307
|
+
hCoeffs.coeffRef(i) = h;
|
308
|
+
|
309
|
+
// Apply similarity transformation to remaining columns,
|
310
|
+
// i.e., compute A = H A H'
|
311
|
+
|
312
|
+
// A = H A
|
313
|
+
matA.bottomRightCorner(remainingSize, remainingSize)
|
314
|
+
.applyHouseholderOnTheLeft(matA.col(i).tail(remainingSize-1), h, &temp.coeffRef(0));
|
315
|
+
|
316
|
+
// A = A H'
|
317
|
+
matA.rightCols(remainingSize)
|
318
|
+
.applyHouseholderOnTheRight(matA.col(i).tail(remainingSize-1).conjugate(), numext::conj(h), &temp.coeffRef(0));
|
319
|
+
}
|
320
|
+
}
|
321
|
+
|
322
|
+
namespace internal {
|
323
|
+
|
324
|
+
/** \eigenvalues_module \ingroup Eigenvalues_Module
|
325
|
+
*
|
326
|
+
*
|
327
|
+
* \brief Expression type for return value of HessenbergDecomposition::matrixH()
|
328
|
+
*
|
329
|
+
* \tparam MatrixType type of matrix in the Hessenberg decomposition
|
330
|
+
*
|
331
|
+
* Objects of this type represent the Hessenberg matrix in the Hessenberg
|
332
|
+
* decomposition of some matrix. The object holds a reference to the
|
333
|
+
* HessenbergDecomposition class until the it is assigned or evaluated for
|
334
|
+
* some other reason (the reference should remain valid during the life time
|
335
|
+
* of this object). This class is the return type of
|
336
|
+
* HessenbergDecomposition::matrixH(); there is probably no other use for this
|
337
|
+
* class.
|
338
|
+
*/
|
339
|
+
template<typename MatrixType> struct HessenbergDecompositionMatrixHReturnType
|
340
|
+
: public ReturnByValue<HessenbergDecompositionMatrixHReturnType<MatrixType> >
|
341
|
+
{
|
342
|
+
public:
|
343
|
+
/** \brief Constructor.
|
344
|
+
*
|
345
|
+
* \param[in] hess Hessenberg decomposition
|
346
|
+
*/
|
347
|
+
HessenbergDecompositionMatrixHReturnType(const HessenbergDecomposition<MatrixType>& hess) : m_hess(hess) { }
|
348
|
+
|
349
|
+
/** \brief Hessenberg matrix in decomposition.
|
350
|
+
*
|
351
|
+
* \param[out] result Hessenberg matrix in decomposition \p hess which
|
352
|
+
* was passed to the constructor
|
353
|
+
*/
|
354
|
+
template <typename ResultType>
|
355
|
+
inline void evalTo(ResultType& result) const
|
356
|
+
{
|
357
|
+
result = m_hess.packedMatrix();
|
358
|
+
Index n = result.rows();
|
359
|
+
if (n>2)
|
360
|
+
result.bottomLeftCorner(n-2, n-2).template triangularView<Lower>().setZero();
|
361
|
+
}
|
362
|
+
|
363
|
+
Index rows() const { return m_hess.packedMatrix().rows(); }
|
364
|
+
Index cols() const { return m_hess.packedMatrix().cols(); }
|
365
|
+
|
366
|
+
protected:
|
367
|
+
const HessenbergDecomposition<MatrixType>& m_hess;
|
368
|
+
};
|
369
|
+
|
370
|
+
} // end namespace internal
|
371
|
+
|
372
|
+
} // end namespace Eigen
|
373
|
+
|
374
|
+
#endif // EIGEN_HESSENBERGDECOMPOSITION_H
|
@@ -0,0 +1,158 @@
|
|
1
|
+
// This file is part of Eigen, a lightweight C++ template library
|
2
|
+
// for linear algebra.
|
3
|
+
//
|
4
|
+
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
|
5
|
+
// Copyright (C) 2010 Jitse Niesen <jitse@maths.leeds.ac.uk>
|
6
|
+
//
|
7
|
+
// This Source Code Form is subject to the terms of the Mozilla
|
8
|
+
// Public License v. 2.0. If a copy of the MPL was not distributed
|
9
|
+
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
|
10
|
+
|
11
|
+
#ifndef EIGEN_MATRIXBASEEIGENVALUES_H
|
12
|
+
#define EIGEN_MATRIXBASEEIGENVALUES_H
|
13
|
+
|
14
|
+
namespace Eigen {
|
15
|
+
|
16
|
+
namespace internal {
|
17
|
+
|
18
|
+
template<typename Derived, bool IsComplex>
|
19
|
+
struct eigenvalues_selector
|
20
|
+
{
|
21
|
+
// this is the implementation for the case IsComplex = true
|
22
|
+
static inline typename MatrixBase<Derived>::EigenvaluesReturnType const
|
23
|
+
run(const MatrixBase<Derived>& m)
|
24
|
+
{
|
25
|
+
typedef typename Derived::PlainObject PlainObject;
|
26
|
+
PlainObject m_eval(m);
|
27
|
+
return ComplexEigenSolver<PlainObject>(m_eval, false).eigenvalues();
|
28
|
+
}
|
29
|
+
};
|
30
|
+
|
31
|
+
template<typename Derived>
|
32
|
+
struct eigenvalues_selector<Derived, false>
|
33
|
+
{
|
34
|
+
static inline typename MatrixBase<Derived>::EigenvaluesReturnType const
|
35
|
+
run(const MatrixBase<Derived>& m)
|
36
|
+
{
|
37
|
+
typedef typename Derived::PlainObject PlainObject;
|
38
|
+
PlainObject m_eval(m);
|
39
|
+
return EigenSolver<PlainObject>(m_eval, false).eigenvalues();
|
40
|
+
}
|
41
|
+
};
|
42
|
+
|
43
|
+
} // end namespace internal
|
44
|
+
|
45
|
+
/** \brief Computes the eigenvalues of a matrix
|
46
|
+
* \returns Column vector containing the eigenvalues.
|
47
|
+
*
|
48
|
+
* \eigenvalues_module
|
49
|
+
* This function computes the eigenvalues with the help of the EigenSolver
|
50
|
+
* class (for real matrices) or the ComplexEigenSolver class (for complex
|
51
|
+
* matrices).
|
52
|
+
*
|
53
|
+
* The eigenvalues are repeated according to their algebraic multiplicity,
|
54
|
+
* so there are as many eigenvalues as rows in the matrix.
|
55
|
+
*
|
56
|
+
* The SelfAdjointView class provides a better algorithm for selfadjoint
|
57
|
+
* matrices.
|
58
|
+
*
|
59
|
+
* Example: \include MatrixBase_eigenvalues.cpp
|
60
|
+
* Output: \verbinclude MatrixBase_eigenvalues.out
|
61
|
+
*
|
62
|
+
* \sa EigenSolver::eigenvalues(), ComplexEigenSolver::eigenvalues(),
|
63
|
+
* SelfAdjointView::eigenvalues()
|
64
|
+
*/
|
65
|
+
template<typename Derived>
|
66
|
+
inline typename MatrixBase<Derived>::EigenvaluesReturnType
|
67
|
+
MatrixBase<Derived>::eigenvalues() const
|
68
|
+
{
|
69
|
+
return internal::eigenvalues_selector<Derived, NumTraits<Scalar>::IsComplex>::run(derived());
|
70
|
+
}
|
71
|
+
|
72
|
+
/** \brief Computes the eigenvalues of a matrix
|
73
|
+
* \returns Column vector containing the eigenvalues.
|
74
|
+
*
|
75
|
+
* \eigenvalues_module
|
76
|
+
* This function computes the eigenvalues with the help of the
|
77
|
+
* SelfAdjointEigenSolver class. The eigenvalues are repeated according to
|
78
|
+
* their algebraic multiplicity, so there are as many eigenvalues as rows in
|
79
|
+
* the matrix.
|
80
|
+
*
|
81
|
+
* Example: \include SelfAdjointView_eigenvalues.cpp
|
82
|
+
* Output: \verbinclude SelfAdjointView_eigenvalues.out
|
83
|
+
*
|
84
|
+
* \sa SelfAdjointEigenSolver::eigenvalues(), MatrixBase::eigenvalues()
|
85
|
+
*/
|
86
|
+
template<typename MatrixType, unsigned int UpLo>
|
87
|
+
inline typename SelfAdjointView<MatrixType, UpLo>::EigenvaluesReturnType
|
88
|
+
SelfAdjointView<MatrixType, UpLo>::eigenvalues() const
|
89
|
+
{
|
90
|
+
PlainObject thisAsMatrix(*this);
|
91
|
+
return SelfAdjointEigenSolver<PlainObject>(thisAsMatrix, false).eigenvalues();
|
92
|
+
}
|
93
|
+
|
94
|
+
|
95
|
+
|
96
|
+
/** \brief Computes the L2 operator norm
|
97
|
+
* \returns Operator norm of the matrix.
|
98
|
+
*
|
99
|
+
* \eigenvalues_module
|
100
|
+
* This function computes the L2 operator norm of a matrix, which is also
|
101
|
+
* known as the spectral norm. The norm of a matrix \f$ A \f$ is defined to be
|
102
|
+
* \f[ \|A\|_2 = \max_x \frac{\|Ax\|_2}{\|x\|_2} \f]
|
103
|
+
* where the maximum is over all vectors and the norm on the right is the
|
104
|
+
* Euclidean vector norm. The norm equals the largest singular value, which is
|
105
|
+
* the square root of the largest eigenvalue of the positive semi-definite
|
106
|
+
* matrix \f$ A^*A \f$.
|
107
|
+
*
|
108
|
+
* The current implementation uses the eigenvalues of \f$ A^*A \f$, as computed
|
109
|
+
* by SelfAdjointView::eigenvalues(), to compute the operator norm of a
|
110
|
+
* matrix. The SelfAdjointView class provides a better algorithm for
|
111
|
+
* selfadjoint matrices.
|
112
|
+
*
|
113
|
+
* Example: \include MatrixBase_operatorNorm.cpp
|
114
|
+
* Output: \verbinclude MatrixBase_operatorNorm.out
|
115
|
+
*
|
116
|
+
* \sa SelfAdjointView::eigenvalues(), SelfAdjointView::operatorNorm()
|
117
|
+
*/
|
118
|
+
template<typename Derived>
|
119
|
+
inline typename MatrixBase<Derived>::RealScalar
|
120
|
+
MatrixBase<Derived>::operatorNorm() const
|
121
|
+
{
|
122
|
+
using std::sqrt;
|
123
|
+
typename Derived::PlainObject m_eval(derived());
|
124
|
+
// FIXME if it is really guaranteed that the eigenvalues are already sorted,
|
125
|
+
// then we don't need to compute a maxCoeff() here, comparing the 1st and last ones is enough.
|
126
|
+
return sqrt((m_eval*m_eval.adjoint())
|
127
|
+
.eval()
|
128
|
+
.template selfadjointView<Lower>()
|
129
|
+
.eigenvalues()
|
130
|
+
.maxCoeff()
|
131
|
+
);
|
132
|
+
}
|
133
|
+
|
134
|
+
/** \brief Computes the L2 operator norm
|
135
|
+
* \returns Operator norm of the matrix.
|
136
|
+
*
|
137
|
+
* \eigenvalues_module
|
138
|
+
* This function computes the L2 operator norm of a self-adjoint matrix. For a
|
139
|
+
* self-adjoint matrix, the operator norm is the largest eigenvalue.
|
140
|
+
*
|
141
|
+
* The current implementation uses the eigenvalues of the matrix, as computed
|
142
|
+
* by eigenvalues(), to compute the operator norm of the matrix.
|
143
|
+
*
|
144
|
+
* Example: \include SelfAdjointView_operatorNorm.cpp
|
145
|
+
* Output: \verbinclude SelfAdjointView_operatorNorm.out
|
146
|
+
*
|
147
|
+
* \sa eigenvalues(), MatrixBase::operatorNorm()
|
148
|
+
*/
|
149
|
+
template<typename MatrixType, unsigned int UpLo>
|
150
|
+
inline typename SelfAdjointView<MatrixType, UpLo>::RealScalar
|
151
|
+
SelfAdjointView<MatrixType, UpLo>::operatorNorm() const
|
152
|
+
{
|
153
|
+
return eigenvalues().cwiseAbs().maxCoeff();
|
154
|
+
}
|
155
|
+
|
156
|
+
} // end namespace Eigen
|
157
|
+
|
158
|
+
#endif
|