tomoto 0.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE.txt +22 -0
- data/README.md +123 -0
- data/ext/tomoto/ext.cpp +245 -0
- data/ext/tomoto/extconf.rb +28 -0
- data/lib/tomoto.rb +12 -0
- data/lib/tomoto/ct.rb +11 -0
- data/lib/tomoto/hdp.rb +11 -0
- data/lib/tomoto/lda.rb +67 -0
- data/lib/tomoto/version.rb +3 -0
- data/vendor/EigenRand/EigenRand/Core.h +1139 -0
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
- data/vendor/EigenRand/EigenRand/EigenRand +19 -0
- data/vendor/EigenRand/EigenRand/Macro.h +24 -0
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
- data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
- data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
- data/vendor/EigenRand/EigenRand/doc.h +220 -0
- data/vendor/EigenRand/LICENSE +21 -0
- data/vendor/EigenRand/README.md +288 -0
- data/vendor/eigen/COPYING.BSD +26 -0
- data/vendor/eigen/COPYING.GPL +674 -0
- data/vendor/eigen/COPYING.LGPL +502 -0
- data/vendor/eigen/COPYING.MINPACK +52 -0
- data/vendor/eigen/COPYING.MPL2 +373 -0
- data/vendor/eigen/COPYING.README +18 -0
- data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
- data/vendor/eigen/Eigen/Cholesky +46 -0
- data/vendor/eigen/Eigen/CholmodSupport +48 -0
- data/vendor/eigen/Eigen/Core +537 -0
- data/vendor/eigen/Eigen/Dense +7 -0
- data/vendor/eigen/Eigen/Eigen +2 -0
- data/vendor/eigen/Eigen/Eigenvalues +61 -0
- data/vendor/eigen/Eigen/Geometry +62 -0
- data/vendor/eigen/Eigen/Householder +30 -0
- data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/eigen/Eigen/Jacobi +33 -0
- data/vendor/eigen/Eigen/LU +50 -0
- data/vendor/eigen/Eigen/MetisSupport +35 -0
- data/vendor/eigen/Eigen/OrderingMethods +73 -0
- data/vendor/eigen/Eigen/PaStiXSupport +48 -0
- data/vendor/eigen/Eigen/PardisoSupport +35 -0
- data/vendor/eigen/Eigen/QR +51 -0
- data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
- data/vendor/eigen/Eigen/SPQRSupport +34 -0
- data/vendor/eigen/Eigen/SVD +51 -0
- data/vendor/eigen/Eigen/Sparse +36 -0
- data/vendor/eigen/Eigen/SparseCholesky +45 -0
- data/vendor/eigen/Eigen/SparseCore +69 -0
- data/vendor/eigen/Eigen/SparseLU +46 -0
- data/vendor/eigen/Eigen/SparseQR +37 -0
- data/vendor/eigen/Eigen/StdDeque +27 -0
- data/vendor/eigen/Eigen/StdList +26 -0
- data/vendor/eigen/Eigen/StdVector +27 -0
- data/vendor/eigen/Eigen/SuperLUSupport +64 -0
- data/vendor/eigen/Eigen/UmfPackSupport +40 -0
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
- data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
- data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
- data/vendor/eigen/Eigen/src/Core/EigenBase.h +159 -0
- data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +146 -0
- data/vendor/eigen/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
- data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +593 -0
- data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +187 -0
- data/vendor/eigen/Eigen/src/Core/IO.h +225 -0
- data/vendor/eigen/Eigen/src/Core/Inverse.h +118 -0
- data/vendor/eigen/Eigen/src/Core/Map.h +171 -0
- data/vendor/eigen/Eigen/src/Core/MapBase.h +303 -0
- data/vendor/eigen/Eigen/src/Core/MathFunctions.h +1415 -0
- data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +101 -0
- data/vendor/eigen/Eigen/src/Core/Matrix.h +459 -0
- data/vendor/eigen/Eigen/src/Core/MatrixBase.h +529 -0
- data/vendor/eigen/Eigen/src/Core/NestByValue.h +110 -0
- data/vendor/eigen/Eigen/src/Core/NoAlias.h +108 -0
- data/vendor/eigen/Eigen/src/Core/NumTraits.h +248 -0
- data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +633 -0
- data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +1035 -0
- data/vendor/eigen/Eigen/src/Core/Product.h +186 -0
- data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +1112 -0
- data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
- data/vendor/eigen/Eigen/src/Core/Redux.h +505 -0
- data/vendor/eigen/Eigen/src/Core/Ref.h +283 -0
- data/vendor/eigen/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +117 -0
- data/vendor/eigen/Eigen/src/Core/Reverse.h +211 -0
- data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
- data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +352 -0
- data/vendor/eigen/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/eigen/Eigen/src/Core/Solve.h +188 -0
- data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/eigen/Eigen/src/Core/SolverBase.h +130 -0
- data/vendor/eigen/Eigen/src/Core/StableNorm.h +221 -0
- data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
- data/vendor/eigen/Eigen/src/Core/Swap.h +67 -0
- data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
- data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +674 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
- data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +335 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +145 -0
- data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +398 -0
- data/vendor/eigen/Eigen/src/Core/util/Constants.h +547 -0
- data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +83 -0
- data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
- data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +130 -0
- data/vendor/eigen/Eigen/src/Core/util/Macros.h +1001 -0
- data/vendor/eigen/Eigen/src/Core/util/Memory.h +993 -0
- data/vendor/eigen/Eigen/src/Core/util/Meta.h +534 -0
- data/vendor/eigen/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +27 -0
- data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +218 -0
- data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +821 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +459 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +654 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +546 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +870 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +556 -0
- data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +392 -0
- data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +497 -0
- data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +234 -0
- data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +195 -0
- data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +814 -0
- data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/eigen/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/eigen/Eigen/src/Geometry/Scaling.h +170 -0
- data/vendor/eigen/Eigen/src/Geometry/Transform.h +1542 -0
- data/vendor/eigen/Eigen/src/Geometry/Translation.h +208 -0
- data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +161 -0
- data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +103 -0
- data/vendor/eigen/Eigen/src/Householder/Householder.h +172 -0
- data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +470 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +228 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +246 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +400 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +462 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +394 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +216 -0
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +115 -0
- data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +462 -0
- data/vendor/eigen/Eigen/src/LU/Determinant.h +101 -0
- data/vendor/eigen/Eigen/src/LU/FullPivLU.h +891 -0
- data/vendor/eigen/Eigen/src/LU/InverseImpl.h +415 -0
- data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +611 -0
- data/vendor/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +338 -0
- data/vendor/eigen/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +445 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +1843 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +157 -0
- data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +543 -0
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +653 -0
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +562 -0
- data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +676 -0
- data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +409 -0
- data/vendor/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +313 -0
- data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +1246 -0
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +804 -0
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/eigen/Eigen/src/SVD/SVDBase.h +315 -0
- data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +689 -0
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
- data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +377 -0
- data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +258 -0
- data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +216 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +603 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +341 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +726 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +148 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +320 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +1403 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +405 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +169 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +656 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +178 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +253 -0
- data/vendor/eigen/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +773 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +301 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +745 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +126 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/eigen/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
- data/vendor/eigen/Eigen/src/misc/Image.h +82 -0
- data/vendor/eigen/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
- data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
- data/vendor/eigen/Eigen/src/misc/lapacke.h +16291 -0
- data/vendor/eigen/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +332 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +552 -0
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +1058 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +163 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +85 -0
- data/vendor/eigen/README.md +3 -0
- data/vendor/eigen/bench/README.txt +55 -0
- data/vendor/eigen/bench/btl/COPYING +340 -0
- data/vendor/eigen/bench/btl/README +154 -0
- data/vendor/eigen/bench/tensors/README +21 -0
- data/vendor/eigen/blas/README.txt +6 -0
- data/vendor/eigen/demos/mandelbrot/README +10 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +9 -0
- data/vendor/eigen/demos/opengl/README +13 -0
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +1760 -0
- data/vendor/eigen/unsupported/README.txt +50 -0
- data/vendor/tomotopy/LICENSE +21 -0
- data/vendor/tomotopy/README.kr.rst +375 -0
- data/vendor/tomotopy/README.rst +382 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
- data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
- data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
- data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +374 -0
- data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
- data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.cpp +15 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
- data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
- data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
- data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
- data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +588 -0
- data/vendor/tomotopy/src/TopicModel/LDA.h +144 -0
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
- data/vendor/tomotopy/src/TopicModel/LLDA.h +45 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +203 -0
- data/vendor/tomotopy/src/TopicModel/MGLDA.h +63 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +558 -0
- data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
- data/vendor/tomotopy/src/TopicModel/PLDA.h +17 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +214 -0
- data/vendor/tomotopy/src/TopicModel/SLDA.h +54 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +456 -0
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +692 -0
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +169 -0
- data/vendor/tomotopy/src/Utils/Dictionary.h +80 -0
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +181 -0
- data/vendor/tomotopy/src/Utils/LBFGS.h +202 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h +120 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h +122 -0
- data/vendor/tomotopy/src/Utils/LBFGS/Param.h +213 -0
- data/vendor/tomotopy/src/Utils/LUT.hpp +82 -0
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
- data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
- data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
- data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
- data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
- data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
- data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
- data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
- data/vendor/tomotopy/src/Utils/exception.h +28 -0
- data/vendor/tomotopy/src/Utils/math.h +281 -0
- data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
- data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
- data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
- data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
- data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
- data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
- data/vendor/tomotopy/src/Utils/text.hpp +49 -0
- data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
- metadata +531 -0
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_RANDOM_H
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#define EIGEN_RANDOM_H
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namespace Eigen {
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namespace internal {
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template<typename Scalar> struct scalar_random_op {
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EIGEN_EMPTY_STRUCT_CTOR(scalar_random_op)
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inline const Scalar operator() () const { return random<Scalar>(); }
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};
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template<typename Scalar>
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struct functor_traits<scalar_random_op<Scalar> >
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{ enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = false, IsRepeatable = false }; };
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} // end namespace internal
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/** \returns a random matrix expression
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*
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* Numbers are uniformly spread through their whole definition range for integer types,
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* and in the [-1:1] range for floating point scalar types.
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*
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* The parameters \a rows and \a cols are the number of rows and of columns of
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* the returned matrix. Must be compatible with this MatrixBase type.
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*
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* \not_reentrant
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*
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* This variant is meant to be used for dynamic-size matrix types. For fixed-size types,
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* it is redundant to pass \a rows and \a cols as arguments, so Random() should be used
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* instead.
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*
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*
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* Example: \include MatrixBase_random_int_int.cpp
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* Output: \verbinclude MatrixBase_random_int_int.out
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*
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* This expression has the "evaluate before nesting" flag so that it will be evaluated into
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* a temporary matrix whenever it is nested in a larger expression. This prevents unexpected
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* behavior with expressions involving random matrices.
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*
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* See DenseBase::NullaryExpr(Index, const CustomNullaryOp&) for an example using C++11 random generators.
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*
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* \sa DenseBase::setRandom(), DenseBase::Random(Index), DenseBase::Random()
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*/
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template<typename Derived>
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inline const typename DenseBase<Derived>::RandomReturnType
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DenseBase<Derived>::Random(Index rows, Index cols)
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{
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return NullaryExpr(rows, cols, internal::scalar_random_op<Scalar>());
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}
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/** \returns a random vector expression
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*
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* Numbers are uniformly spread through their whole definition range for integer types,
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* and in the [-1:1] range for floating point scalar types.
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*
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* The parameter \a size is the size of the returned vector.
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* Must be compatible with this MatrixBase type.
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*
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* \only_for_vectors
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* \not_reentrant
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*
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* This variant is meant to be used for dynamic-size vector types. For fixed-size types,
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* it is redundant to pass \a size as argument, so Random() should be used
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* instead.
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*
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* Example: \include MatrixBase_random_int.cpp
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* Output: \verbinclude MatrixBase_random_int.out
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*
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* This expression has the "evaluate before nesting" flag so that it will be evaluated into
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* a temporary vector whenever it is nested in a larger expression. This prevents unexpected
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* behavior with expressions involving random matrices.
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*
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* \sa DenseBase::setRandom(), DenseBase::Random(Index,Index), DenseBase::Random()
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*/
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template<typename Derived>
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inline const typename DenseBase<Derived>::RandomReturnType
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DenseBase<Derived>::Random(Index size)
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{
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return NullaryExpr(size, internal::scalar_random_op<Scalar>());
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}
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/** \returns a fixed-size random matrix or vector expression
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*
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* and in the [-1:1] range for floating point scalar types.
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*
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* This variant is only for fixed-size MatrixBase types. For dynamic-size types, you
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* need to use the variants taking size arguments.
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*
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* Example: \include MatrixBase_random.cpp
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* Output: \verbinclude MatrixBase_random.out
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*
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* This expression has the "evaluate before nesting" flag so that it will be evaluated into
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* a temporary matrix whenever it is nested in a larger expression. This prevents unexpected
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* behavior with expressions involving random matrices.
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*
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* \not_reentrant
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*
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* \sa DenseBase::setRandom(), DenseBase::Random(Index,Index), DenseBase::Random(Index)
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*/
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template<typename Derived>
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inline const typename DenseBase<Derived>::RandomReturnType
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DenseBase<Derived>::Random()
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{
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return NullaryExpr(RowsAtCompileTime, ColsAtCompileTime, internal::scalar_random_op<Scalar>());
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}
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/** Sets all coefficients in this expression to random values.
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*
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* and in the [-1:1] range for floating point scalar types.
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*
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* \not_reentrant
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*
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* Example: \include MatrixBase_setRandom.cpp
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* Output: \verbinclude MatrixBase_setRandom.out
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*
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* \sa class CwiseNullaryOp, setRandom(Index), setRandom(Index,Index)
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*/
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template<typename Derived>
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inline Derived& DenseBase<Derived>::setRandom()
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{
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return *this = Random(rows(), cols());
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}
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/** Resizes to the given \a newSize, and sets all coefficients in this expression to random values.
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*
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* Numbers are uniformly spread through their whole definition range for integer types,
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* and in the [-1:1] range for floating point scalar types.
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*
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* \only_for_vectors
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* \not_reentrant
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*
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* Example: \include Matrix_setRandom_int.cpp
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* Output: \verbinclude Matrix_setRandom_int.out
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*
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* \sa DenseBase::setRandom(), setRandom(Index,Index), class CwiseNullaryOp, DenseBase::Random()
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*/
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template<typename Derived>
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EIGEN_STRONG_INLINE Derived&
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PlainObjectBase<Derived>::setRandom(Index newSize)
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{
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resize(newSize);
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return setRandom();
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}
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/** Resizes to the given size, and sets all coefficients in this expression to random values.
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*
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* Numbers are uniformly spread through their whole definition range for integer types,
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* and in the [-1:1] range for floating point scalar types.
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*
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* \not_reentrant
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*
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* \param rows the new number of rows
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* \param cols the new number of columns
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*
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* Example: \include Matrix_setRandom_int_int.cpp
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* Output: \verbinclude Matrix_setRandom_int_int.out
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*
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* \sa DenseBase::setRandom(), setRandom(Index), class CwiseNullaryOp, DenseBase::Random()
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*/
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template<typename Derived>
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EIGEN_STRONG_INLINE Derived&
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PlainObjectBase<Derived>::setRandom(Index rows, Index cols)
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{
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resize(rows, cols);
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return setRandom();
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}
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} // end namespace Eigen
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#endif // EIGEN_RANDOM_H
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
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// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_REDUX_H
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#define EIGEN_REDUX_H
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namespace Eigen {
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namespace internal {
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// TODO
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// * implement other kind of vectorization
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// * factorize code
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/***************************************************************************
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23
|
+
* Part 1 : the logic deciding a strategy for vectorization and unrolling
|
|
24
|
+
***************************************************************************/
|
|
25
|
+
|
|
26
|
+
template<typename Func, typename Derived>
|
|
27
|
+
struct redux_traits
|
|
28
|
+
{
|
|
29
|
+
public:
|
|
30
|
+
typedef typename find_best_packet<typename Derived::Scalar,Derived::SizeAtCompileTime>::type PacketType;
|
|
31
|
+
enum {
|
|
32
|
+
PacketSize = unpacket_traits<PacketType>::size,
|
|
33
|
+
InnerMaxSize = int(Derived::IsRowMajor)
|
|
34
|
+
? Derived::MaxColsAtCompileTime
|
|
35
|
+
: Derived::MaxRowsAtCompileTime
|
|
36
|
+
};
|
|
37
|
+
|
|
38
|
+
enum {
|
|
39
|
+
MightVectorize = (int(Derived::Flags)&ActualPacketAccessBit)
|
|
40
|
+
&& (functor_traits<Func>::PacketAccess),
|
|
41
|
+
MayLinearVectorize = bool(MightVectorize) && (int(Derived::Flags)&LinearAccessBit),
|
|
42
|
+
MaySliceVectorize = bool(MightVectorize) && int(InnerMaxSize)>=3*PacketSize
|
|
43
|
+
};
|
|
44
|
+
|
|
45
|
+
public:
|
|
46
|
+
enum {
|
|
47
|
+
Traversal = int(MayLinearVectorize) ? int(LinearVectorizedTraversal)
|
|
48
|
+
: int(MaySliceVectorize) ? int(SliceVectorizedTraversal)
|
|
49
|
+
: int(DefaultTraversal)
|
|
50
|
+
};
|
|
51
|
+
|
|
52
|
+
public:
|
|
53
|
+
enum {
|
|
54
|
+
Cost = Derived::SizeAtCompileTime == Dynamic ? HugeCost
|
|
55
|
+
: Derived::SizeAtCompileTime * Derived::CoeffReadCost + (Derived::SizeAtCompileTime-1) * functor_traits<Func>::Cost,
|
|
56
|
+
UnrollingLimit = EIGEN_UNROLLING_LIMIT * (int(Traversal) == int(DefaultTraversal) ? 1 : int(PacketSize))
|
|
57
|
+
};
|
|
58
|
+
|
|
59
|
+
public:
|
|
60
|
+
enum {
|
|
61
|
+
Unrolling = Cost <= UnrollingLimit ? CompleteUnrolling : NoUnrolling
|
|
62
|
+
};
|
|
63
|
+
|
|
64
|
+
#ifdef EIGEN_DEBUG_ASSIGN
|
|
65
|
+
static void debug()
|
|
66
|
+
{
|
|
67
|
+
std::cerr << "Xpr: " << typeid(typename Derived::XprType).name() << std::endl;
|
|
68
|
+
std::cerr.setf(std::ios::hex, std::ios::basefield);
|
|
69
|
+
EIGEN_DEBUG_VAR(Derived::Flags)
|
|
70
|
+
std::cerr.unsetf(std::ios::hex);
|
|
71
|
+
EIGEN_DEBUG_VAR(InnerMaxSize)
|
|
72
|
+
EIGEN_DEBUG_VAR(PacketSize)
|
|
73
|
+
EIGEN_DEBUG_VAR(MightVectorize)
|
|
74
|
+
EIGEN_DEBUG_VAR(MayLinearVectorize)
|
|
75
|
+
EIGEN_DEBUG_VAR(MaySliceVectorize)
|
|
76
|
+
EIGEN_DEBUG_VAR(Traversal)
|
|
77
|
+
EIGEN_DEBUG_VAR(UnrollingLimit)
|
|
78
|
+
EIGEN_DEBUG_VAR(Unrolling)
|
|
79
|
+
std::cerr << std::endl;
|
|
80
|
+
}
|
|
81
|
+
#endif
|
|
82
|
+
};
|
|
83
|
+
|
|
84
|
+
/***************************************************************************
|
|
85
|
+
* Part 2 : unrollers
|
|
86
|
+
***************************************************************************/
|
|
87
|
+
|
|
88
|
+
/*** no vectorization ***/
|
|
89
|
+
|
|
90
|
+
template<typename Func, typename Derived, int Start, int Length>
|
|
91
|
+
struct redux_novec_unroller
|
|
92
|
+
{
|
|
93
|
+
enum {
|
|
94
|
+
HalfLength = Length/2
|
|
95
|
+
};
|
|
96
|
+
|
|
97
|
+
typedef typename Derived::Scalar Scalar;
|
|
98
|
+
|
|
99
|
+
EIGEN_DEVICE_FUNC
|
|
100
|
+
static EIGEN_STRONG_INLINE Scalar run(const Derived &mat, const Func& func)
|
|
101
|
+
{
|
|
102
|
+
return func(redux_novec_unroller<Func, Derived, Start, HalfLength>::run(mat,func),
|
|
103
|
+
redux_novec_unroller<Func, Derived, Start+HalfLength, Length-HalfLength>::run(mat,func));
|
|
104
|
+
}
|
|
105
|
+
};
|
|
106
|
+
|
|
107
|
+
template<typename Func, typename Derived, int Start>
|
|
108
|
+
struct redux_novec_unroller<Func, Derived, Start, 1>
|
|
109
|
+
{
|
|
110
|
+
enum {
|
|
111
|
+
outer = Start / Derived::InnerSizeAtCompileTime,
|
|
112
|
+
inner = Start % Derived::InnerSizeAtCompileTime
|
|
113
|
+
};
|
|
114
|
+
|
|
115
|
+
typedef typename Derived::Scalar Scalar;
|
|
116
|
+
|
|
117
|
+
EIGEN_DEVICE_FUNC
|
|
118
|
+
static EIGEN_STRONG_INLINE Scalar run(const Derived &mat, const Func&)
|
|
119
|
+
{
|
|
120
|
+
return mat.coeffByOuterInner(outer, inner);
|
|
121
|
+
}
|
|
122
|
+
};
|
|
123
|
+
|
|
124
|
+
// This is actually dead code and will never be called. It is required
|
|
125
|
+
// to prevent false warnings regarding failed inlining though
|
|
126
|
+
// for 0 length run() will never be called at all.
|
|
127
|
+
template<typename Func, typename Derived, int Start>
|
|
128
|
+
struct redux_novec_unroller<Func, Derived, Start, 0>
|
|
129
|
+
{
|
|
130
|
+
typedef typename Derived::Scalar Scalar;
|
|
131
|
+
EIGEN_DEVICE_FUNC
|
|
132
|
+
static EIGEN_STRONG_INLINE Scalar run(const Derived&, const Func&) { return Scalar(); }
|
|
133
|
+
};
|
|
134
|
+
|
|
135
|
+
/*** vectorization ***/
|
|
136
|
+
|
|
137
|
+
template<typename Func, typename Derived, int Start, int Length>
|
|
138
|
+
struct redux_vec_unroller
|
|
139
|
+
{
|
|
140
|
+
enum {
|
|
141
|
+
PacketSize = redux_traits<Func, Derived>::PacketSize,
|
|
142
|
+
HalfLength = Length/2
|
|
143
|
+
};
|
|
144
|
+
|
|
145
|
+
typedef typename Derived::Scalar Scalar;
|
|
146
|
+
typedef typename redux_traits<Func, Derived>::PacketType PacketScalar;
|
|
147
|
+
|
|
148
|
+
static EIGEN_STRONG_INLINE PacketScalar run(const Derived &mat, const Func& func)
|
|
149
|
+
{
|
|
150
|
+
return func.packetOp(
|
|
151
|
+
redux_vec_unroller<Func, Derived, Start, HalfLength>::run(mat,func),
|
|
152
|
+
redux_vec_unroller<Func, Derived, Start+HalfLength, Length-HalfLength>::run(mat,func) );
|
|
153
|
+
}
|
|
154
|
+
};
|
|
155
|
+
|
|
156
|
+
template<typename Func, typename Derived, int Start>
|
|
157
|
+
struct redux_vec_unroller<Func, Derived, Start, 1>
|
|
158
|
+
{
|
|
159
|
+
enum {
|
|
160
|
+
index = Start * redux_traits<Func, Derived>::PacketSize,
|
|
161
|
+
outer = index / int(Derived::InnerSizeAtCompileTime),
|
|
162
|
+
inner = index % int(Derived::InnerSizeAtCompileTime),
|
|
163
|
+
alignment = Derived::Alignment
|
|
164
|
+
};
|
|
165
|
+
|
|
166
|
+
typedef typename Derived::Scalar Scalar;
|
|
167
|
+
typedef typename redux_traits<Func, Derived>::PacketType PacketScalar;
|
|
168
|
+
|
|
169
|
+
static EIGEN_STRONG_INLINE PacketScalar run(const Derived &mat, const Func&)
|
|
170
|
+
{
|
|
171
|
+
return mat.template packetByOuterInner<alignment,PacketScalar>(outer, inner);
|
|
172
|
+
}
|
|
173
|
+
};
|
|
174
|
+
|
|
175
|
+
/***************************************************************************
|
|
176
|
+
* Part 3 : implementation of all cases
|
|
177
|
+
***************************************************************************/
|
|
178
|
+
|
|
179
|
+
template<typename Func, typename Derived,
|
|
180
|
+
int Traversal = redux_traits<Func, Derived>::Traversal,
|
|
181
|
+
int Unrolling = redux_traits<Func, Derived>::Unrolling
|
|
182
|
+
>
|
|
183
|
+
struct redux_impl;
|
|
184
|
+
|
|
185
|
+
template<typename Func, typename Derived>
|
|
186
|
+
struct redux_impl<Func, Derived, DefaultTraversal, NoUnrolling>
|
|
187
|
+
{
|
|
188
|
+
typedef typename Derived::Scalar Scalar;
|
|
189
|
+
EIGEN_DEVICE_FUNC
|
|
190
|
+
static EIGEN_STRONG_INLINE Scalar run(const Derived &mat, const Func& func)
|
|
191
|
+
{
|
|
192
|
+
eigen_assert(mat.rows()>0 && mat.cols()>0 && "you are using an empty matrix");
|
|
193
|
+
Scalar res;
|
|
194
|
+
res = mat.coeffByOuterInner(0, 0);
|
|
195
|
+
for(Index i = 1; i < mat.innerSize(); ++i)
|
|
196
|
+
res = func(res, mat.coeffByOuterInner(0, i));
|
|
197
|
+
for(Index i = 1; i < mat.outerSize(); ++i)
|
|
198
|
+
for(Index j = 0; j < mat.innerSize(); ++j)
|
|
199
|
+
res = func(res, mat.coeffByOuterInner(i, j));
|
|
200
|
+
return res;
|
|
201
|
+
}
|
|
202
|
+
};
|
|
203
|
+
|
|
204
|
+
template<typename Func, typename Derived>
|
|
205
|
+
struct redux_impl<Func,Derived, DefaultTraversal, CompleteUnrolling>
|
|
206
|
+
: public redux_novec_unroller<Func,Derived, 0, Derived::SizeAtCompileTime>
|
|
207
|
+
{};
|
|
208
|
+
|
|
209
|
+
template<typename Func, typename Derived>
|
|
210
|
+
struct redux_impl<Func, Derived, LinearVectorizedTraversal, NoUnrolling>
|
|
211
|
+
{
|
|
212
|
+
typedef typename Derived::Scalar Scalar;
|
|
213
|
+
typedef typename redux_traits<Func, Derived>::PacketType PacketScalar;
|
|
214
|
+
|
|
215
|
+
static Scalar run(const Derived &mat, const Func& func)
|
|
216
|
+
{
|
|
217
|
+
const Index size = mat.size();
|
|
218
|
+
|
|
219
|
+
const Index packetSize = redux_traits<Func, Derived>::PacketSize;
|
|
220
|
+
const int packetAlignment = unpacket_traits<PacketScalar>::alignment;
|
|
221
|
+
enum {
|
|
222
|
+
alignment0 = (bool(Derived::Flags & DirectAccessBit) && bool(packet_traits<Scalar>::AlignedOnScalar)) ? int(packetAlignment) : int(Unaligned),
|
|
223
|
+
alignment = EIGEN_PLAIN_ENUM_MAX(alignment0, Derived::Alignment)
|
|
224
|
+
};
|
|
225
|
+
const Index alignedStart = internal::first_default_aligned(mat.nestedExpression());
|
|
226
|
+
const Index alignedSize2 = ((size-alignedStart)/(2*packetSize))*(2*packetSize);
|
|
227
|
+
const Index alignedSize = ((size-alignedStart)/(packetSize))*(packetSize);
|
|
228
|
+
const Index alignedEnd2 = alignedStart + alignedSize2;
|
|
229
|
+
const Index alignedEnd = alignedStart + alignedSize;
|
|
230
|
+
Scalar res;
|
|
231
|
+
if(alignedSize)
|
|
232
|
+
{
|
|
233
|
+
PacketScalar packet_res0 = mat.template packet<alignment,PacketScalar>(alignedStart);
|
|
234
|
+
if(alignedSize>packetSize) // we have at least two packets to partly unroll the loop
|
|
235
|
+
{
|
|
236
|
+
PacketScalar packet_res1 = mat.template packet<alignment,PacketScalar>(alignedStart+packetSize);
|
|
237
|
+
for(Index index = alignedStart + 2*packetSize; index < alignedEnd2; index += 2*packetSize)
|
|
238
|
+
{
|
|
239
|
+
packet_res0 = func.packetOp(packet_res0, mat.template packet<alignment,PacketScalar>(index));
|
|
240
|
+
packet_res1 = func.packetOp(packet_res1, mat.template packet<alignment,PacketScalar>(index+packetSize));
|
|
241
|
+
}
|
|
242
|
+
|
|
243
|
+
packet_res0 = func.packetOp(packet_res0,packet_res1);
|
|
244
|
+
if(alignedEnd>alignedEnd2)
|
|
245
|
+
packet_res0 = func.packetOp(packet_res0, mat.template packet<alignment,PacketScalar>(alignedEnd2));
|
|
246
|
+
}
|
|
247
|
+
res = func.predux(packet_res0);
|
|
248
|
+
|
|
249
|
+
for(Index index = 0; index < alignedStart; ++index)
|
|
250
|
+
res = func(res,mat.coeff(index));
|
|
251
|
+
|
|
252
|
+
for(Index index = alignedEnd; index < size; ++index)
|
|
253
|
+
res = func(res,mat.coeff(index));
|
|
254
|
+
}
|
|
255
|
+
else // too small to vectorize anything.
|
|
256
|
+
// since this is dynamic-size hence inefficient anyway for such small sizes, don't try to optimize.
|
|
257
|
+
{
|
|
258
|
+
res = mat.coeff(0);
|
|
259
|
+
for(Index index = 1; index < size; ++index)
|
|
260
|
+
res = func(res,mat.coeff(index));
|
|
261
|
+
}
|
|
262
|
+
|
|
263
|
+
return res;
|
|
264
|
+
}
|
|
265
|
+
};
|
|
266
|
+
|
|
267
|
+
// NOTE: for SliceVectorizedTraversal we simply bypass unrolling
|
|
268
|
+
template<typename Func, typename Derived, int Unrolling>
|
|
269
|
+
struct redux_impl<Func, Derived, SliceVectorizedTraversal, Unrolling>
|
|
270
|
+
{
|
|
271
|
+
typedef typename Derived::Scalar Scalar;
|
|
272
|
+
typedef typename redux_traits<Func, Derived>::PacketType PacketType;
|
|
273
|
+
|
|
274
|
+
EIGEN_DEVICE_FUNC static Scalar run(const Derived &mat, const Func& func)
|
|
275
|
+
{
|
|
276
|
+
eigen_assert(mat.rows()>0 && mat.cols()>0 && "you are using an empty matrix");
|
|
277
|
+
const Index innerSize = mat.innerSize();
|
|
278
|
+
const Index outerSize = mat.outerSize();
|
|
279
|
+
enum {
|
|
280
|
+
packetSize = redux_traits<Func, Derived>::PacketSize
|
|
281
|
+
};
|
|
282
|
+
const Index packetedInnerSize = ((innerSize)/packetSize)*packetSize;
|
|
283
|
+
Scalar res;
|
|
284
|
+
if(packetedInnerSize)
|
|
285
|
+
{
|
|
286
|
+
PacketType packet_res = mat.template packet<Unaligned,PacketType>(0,0);
|
|
287
|
+
for(Index j=0; j<outerSize; ++j)
|
|
288
|
+
for(Index i=(j==0?packetSize:0); i<packetedInnerSize; i+=Index(packetSize))
|
|
289
|
+
packet_res = func.packetOp(packet_res, mat.template packetByOuterInner<Unaligned,PacketType>(j,i));
|
|
290
|
+
|
|
291
|
+
res = func.predux(packet_res);
|
|
292
|
+
for(Index j=0; j<outerSize; ++j)
|
|
293
|
+
for(Index i=packetedInnerSize; i<innerSize; ++i)
|
|
294
|
+
res = func(res, mat.coeffByOuterInner(j,i));
|
|
295
|
+
}
|
|
296
|
+
else // too small to vectorize anything.
|
|
297
|
+
// since this is dynamic-size hence inefficient anyway for such small sizes, don't try to optimize.
|
|
298
|
+
{
|
|
299
|
+
res = redux_impl<Func, Derived, DefaultTraversal, NoUnrolling>::run(mat, func);
|
|
300
|
+
}
|
|
301
|
+
|
|
302
|
+
return res;
|
|
303
|
+
}
|
|
304
|
+
};
|
|
305
|
+
|
|
306
|
+
template<typename Func, typename Derived>
|
|
307
|
+
struct redux_impl<Func, Derived, LinearVectorizedTraversal, CompleteUnrolling>
|
|
308
|
+
{
|
|
309
|
+
typedef typename Derived::Scalar Scalar;
|
|
310
|
+
|
|
311
|
+
typedef typename redux_traits<Func, Derived>::PacketType PacketScalar;
|
|
312
|
+
enum {
|
|
313
|
+
PacketSize = redux_traits<Func, Derived>::PacketSize,
|
|
314
|
+
Size = Derived::SizeAtCompileTime,
|
|
315
|
+
VectorizedSize = (Size / PacketSize) * PacketSize
|
|
316
|
+
};
|
|
317
|
+
EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE Scalar run(const Derived &mat, const Func& func)
|
|
318
|
+
{
|
|
319
|
+
eigen_assert(mat.rows()>0 && mat.cols()>0 && "you are using an empty matrix");
|
|
320
|
+
if (VectorizedSize > 0) {
|
|
321
|
+
Scalar res = func.predux(redux_vec_unroller<Func, Derived, 0, Size / PacketSize>::run(mat,func));
|
|
322
|
+
if (VectorizedSize != Size)
|
|
323
|
+
res = func(res,redux_novec_unroller<Func, Derived, VectorizedSize, Size-VectorizedSize>::run(mat,func));
|
|
324
|
+
return res;
|
|
325
|
+
}
|
|
326
|
+
else {
|
|
327
|
+
return redux_novec_unroller<Func, Derived, 0, Size>::run(mat,func);
|
|
328
|
+
}
|
|
329
|
+
}
|
|
330
|
+
};
|
|
331
|
+
|
|
332
|
+
// evaluator adaptor
|
|
333
|
+
template<typename _XprType>
|
|
334
|
+
class redux_evaluator
|
|
335
|
+
{
|
|
336
|
+
public:
|
|
337
|
+
typedef _XprType XprType;
|
|
338
|
+
EIGEN_DEVICE_FUNC explicit redux_evaluator(const XprType &xpr) : m_evaluator(xpr), m_xpr(xpr) {}
|
|
339
|
+
|
|
340
|
+
typedef typename XprType::Scalar Scalar;
|
|
341
|
+
typedef typename XprType::CoeffReturnType CoeffReturnType;
|
|
342
|
+
typedef typename XprType::PacketScalar PacketScalar;
|
|
343
|
+
typedef typename XprType::PacketReturnType PacketReturnType;
|
|
344
|
+
|
|
345
|
+
enum {
|
|
346
|
+
MaxRowsAtCompileTime = XprType::MaxRowsAtCompileTime,
|
|
347
|
+
MaxColsAtCompileTime = XprType::MaxColsAtCompileTime,
|
|
348
|
+
// TODO we should not remove DirectAccessBit and rather find an elegant way to query the alignment offset at runtime from the evaluator
|
|
349
|
+
Flags = evaluator<XprType>::Flags & ~DirectAccessBit,
|
|
350
|
+
IsRowMajor = XprType::IsRowMajor,
|
|
351
|
+
SizeAtCompileTime = XprType::SizeAtCompileTime,
|
|
352
|
+
InnerSizeAtCompileTime = XprType::InnerSizeAtCompileTime,
|
|
353
|
+
CoeffReadCost = evaluator<XprType>::CoeffReadCost,
|
|
354
|
+
Alignment = evaluator<XprType>::Alignment
|
|
355
|
+
};
|
|
356
|
+
|
|
357
|
+
EIGEN_DEVICE_FUNC Index rows() const { return m_xpr.rows(); }
|
|
358
|
+
EIGEN_DEVICE_FUNC Index cols() const { return m_xpr.cols(); }
|
|
359
|
+
EIGEN_DEVICE_FUNC Index size() const { return m_xpr.size(); }
|
|
360
|
+
EIGEN_DEVICE_FUNC Index innerSize() const { return m_xpr.innerSize(); }
|
|
361
|
+
EIGEN_DEVICE_FUNC Index outerSize() const { return m_xpr.outerSize(); }
|
|
362
|
+
|
|
363
|
+
EIGEN_DEVICE_FUNC
|
|
364
|
+
CoeffReturnType coeff(Index row, Index col) const
|
|
365
|
+
{ return m_evaluator.coeff(row, col); }
|
|
366
|
+
|
|
367
|
+
EIGEN_DEVICE_FUNC
|
|
368
|
+
CoeffReturnType coeff(Index index) const
|
|
369
|
+
{ return m_evaluator.coeff(index); }
|
|
370
|
+
|
|
371
|
+
template<int LoadMode, typename PacketType>
|
|
372
|
+
PacketType packet(Index row, Index col) const
|
|
373
|
+
{ return m_evaluator.template packet<LoadMode,PacketType>(row, col); }
|
|
374
|
+
|
|
375
|
+
template<int LoadMode, typename PacketType>
|
|
376
|
+
PacketType packet(Index index) const
|
|
377
|
+
{ return m_evaluator.template packet<LoadMode,PacketType>(index); }
|
|
378
|
+
|
|
379
|
+
EIGEN_DEVICE_FUNC
|
|
380
|
+
CoeffReturnType coeffByOuterInner(Index outer, Index inner) const
|
|
381
|
+
{ return m_evaluator.coeff(IsRowMajor ? outer : inner, IsRowMajor ? inner : outer); }
|
|
382
|
+
|
|
383
|
+
template<int LoadMode, typename PacketType>
|
|
384
|
+
PacketType packetByOuterInner(Index outer, Index inner) const
|
|
385
|
+
{ return m_evaluator.template packet<LoadMode,PacketType>(IsRowMajor ? outer : inner, IsRowMajor ? inner : outer); }
|
|
386
|
+
|
|
387
|
+
const XprType & nestedExpression() const { return m_xpr; }
|
|
388
|
+
|
|
389
|
+
protected:
|
|
390
|
+
internal::evaluator<XprType> m_evaluator;
|
|
391
|
+
const XprType &m_xpr;
|
|
392
|
+
};
|
|
393
|
+
|
|
394
|
+
} // end namespace internal
|
|
395
|
+
|
|
396
|
+
/***************************************************************************
|
|
397
|
+
* Part 4 : public API
|
|
398
|
+
***************************************************************************/
|
|
399
|
+
|
|
400
|
+
|
|
401
|
+
/** \returns the result of a full redux operation on the whole matrix or vector using \a func
|
|
402
|
+
*
|
|
403
|
+
* The template parameter \a BinaryOp is the type of the functor \a func which must be
|
|
404
|
+
* an associative operator. Both current C++98 and C++11 functor styles are handled.
|
|
405
|
+
*
|
|
406
|
+
* \sa DenseBase::sum(), DenseBase::minCoeff(), DenseBase::maxCoeff(), MatrixBase::colwise(), MatrixBase::rowwise()
|
|
407
|
+
*/
|
|
408
|
+
template<typename Derived>
|
|
409
|
+
template<typename Func>
|
|
410
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
411
|
+
DenseBase<Derived>::redux(const Func& func) const
|
|
412
|
+
{
|
|
413
|
+
eigen_assert(this->rows()>0 && this->cols()>0 && "you are using an empty matrix");
|
|
414
|
+
|
|
415
|
+
typedef typename internal::redux_evaluator<Derived> ThisEvaluator;
|
|
416
|
+
ThisEvaluator thisEval(derived());
|
|
417
|
+
|
|
418
|
+
return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func);
|
|
419
|
+
}
|
|
420
|
+
|
|
421
|
+
/** \returns the minimum of all coefficients of \c *this.
|
|
422
|
+
* \warning the result is undefined if \c *this contains NaN.
|
|
423
|
+
*/
|
|
424
|
+
template<typename Derived>
|
|
425
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
426
|
+
DenseBase<Derived>::minCoeff() const
|
|
427
|
+
{
|
|
428
|
+
return derived().redux(Eigen::internal::scalar_min_op<Scalar,Scalar>());
|
|
429
|
+
}
|
|
430
|
+
|
|
431
|
+
/** \returns the maximum of all coefficients of \c *this.
|
|
432
|
+
* \warning the result is undefined if \c *this contains NaN.
|
|
433
|
+
*/
|
|
434
|
+
template<typename Derived>
|
|
435
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
436
|
+
DenseBase<Derived>::maxCoeff() const
|
|
437
|
+
{
|
|
438
|
+
return derived().redux(Eigen::internal::scalar_max_op<Scalar,Scalar>());
|
|
439
|
+
}
|
|
440
|
+
|
|
441
|
+
/** \returns the sum of all coefficients of \c *this
|
|
442
|
+
*
|
|
443
|
+
* If \c *this is empty, then the value 0 is returned.
|
|
444
|
+
*
|
|
445
|
+
* \sa trace(), prod(), mean()
|
|
446
|
+
*/
|
|
447
|
+
template<typename Derived>
|
|
448
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
449
|
+
DenseBase<Derived>::sum() const
|
|
450
|
+
{
|
|
451
|
+
if(SizeAtCompileTime==0 || (SizeAtCompileTime==Dynamic && size()==0))
|
|
452
|
+
return Scalar(0);
|
|
453
|
+
return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
|
|
454
|
+
}
|
|
455
|
+
|
|
456
|
+
/** \returns the mean of all coefficients of *this
|
|
457
|
+
*
|
|
458
|
+
* \sa trace(), prod(), sum()
|
|
459
|
+
*/
|
|
460
|
+
template<typename Derived>
|
|
461
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
462
|
+
DenseBase<Derived>::mean() const
|
|
463
|
+
{
|
|
464
|
+
#ifdef __INTEL_COMPILER
|
|
465
|
+
#pragma warning push
|
|
466
|
+
#pragma warning ( disable : 2259 )
|
|
467
|
+
#endif
|
|
468
|
+
return Scalar(derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>())) / Scalar(this->size());
|
|
469
|
+
#ifdef __INTEL_COMPILER
|
|
470
|
+
#pragma warning pop
|
|
471
|
+
#endif
|
|
472
|
+
}
|
|
473
|
+
|
|
474
|
+
/** \returns the product of all coefficients of *this
|
|
475
|
+
*
|
|
476
|
+
* Example: \include MatrixBase_prod.cpp
|
|
477
|
+
* Output: \verbinclude MatrixBase_prod.out
|
|
478
|
+
*
|
|
479
|
+
* \sa sum(), mean(), trace()
|
|
480
|
+
*/
|
|
481
|
+
template<typename Derived>
|
|
482
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
483
|
+
DenseBase<Derived>::prod() const
|
|
484
|
+
{
|
|
485
|
+
if(SizeAtCompileTime==0 || (SizeAtCompileTime==Dynamic && size()==0))
|
|
486
|
+
return Scalar(1);
|
|
487
|
+
return derived().redux(Eigen::internal::scalar_product_op<Scalar>());
|
|
488
|
+
}
|
|
489
|
+
|
|
490
|
+
/** \returns the trace of \c *this, i.e. the sum of the coefficients on the main diagonal.
|
|
491
|
+
*
|
|
492
|
+
* \c *this can be any matrix, not necessarily square.
|
|
493
|
+
*
|
|
494
|
+
* \sa diagonal(), sum()
|
|
495
|
+
*/
|
|
496
|
+
template<typename Derived>
|
|
497
|
+
EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
|
|
498
|
+
MatrixBase<Derived>::trace() const
|
|
499
|
+
{
|
|
500
|
+
return derived().diagonal().sum();
|
|
501
|
+
}
|
|
502
|
+
|
|
503
|
+
} // end namespace Eigen
|
|
504
|
+
|
|
505
|
+
#endif // EIGEN_REDUX_H
|