tomoto 0.1.0
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- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE.txt +22 -0
- data/README.md +123 -0
- data/ext/tomoto/ext.cpp +245 -0
- data/ext/tomoto/extconf.rb +28 -0
- data/lib/tomoto.rb +12 -0
- data/lib/tomoto/ct.rb +11 -0
- data/lib/tomoto/hdp.rb +11 -0
- data/lib/tomoto/lda.rb +67 -0
- data/lib/tomoto/version.rb +3 -0
- data/vendor/EigenRand/EigenRand/Core.h +1139 -0
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
- data/vendor/EigenRand/EigenRand/EigenRand +19 -0
- data/vendor/EigenRand/EigenRand/Macro.h +24 -0
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
- data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
- data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
- data/vendor/EigenRand/EigenRand/doc.h +220 -0
- data/vendor/EigenRand/LICENSE +21 -0
- data/vendor/EigenRand/README.md +288 -0
- data/vendor/eigen/COPYING.BSD +26 -0
- data/vendor/eigen/COPYING.GPL +674 -0
- data/vendor/eigen/COPYING.LGPL +502 -0
- data/vendor/eigen/COPYING.MINPACK +52 -0
- data/vendor/eigen/COPYING.MPL2 +373 -0
- data/vendor/eigen/COPYING.README +18 -0
- data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
- data/vendor/eigen/Eigen/Cholesky +46 -0
- data/vendor/eigen/Eigen/CholmodSupport +48 -0
- data/vendor/eigen/Eigen/Core +537 -0
- data/vendor/eigen/Eigen/Dense +7 -0
- data/vendor/eigen/Eigen/Eigen +2 -0
- data/vendor/eigen/Eigen/Eigenvalues +61 -0
- data/vendor/eigen/Eigen/Geometry +62 -0
- data/vendor/eigen/Eigen/Householder +30 -0
- data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/eigen/Eigen/Jacobi +33 -0
- data/vendor/eigen/Eigen/LU +50 -0
- data/vendor/eigen/Eigen/MetisSupport +35 -0
- data/vendor/eigen/Eigen/OrderingMethods +73 -0
- data/vendor/eigen/Eigen/PaStiXSupport +48 -0
- data/vendor/eigen/Eigen/PardisoSupport +35 -0
- data/vendor/eigen/Eigen/QR +51 -0
- data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
- data/vendor/eigen/Eigen/SPQRSupport +34 -0
- data/vendor/eigen/Eigen/SVD +51 -0
- data/vendor/eigen/Eigen/Sparse +36 -0
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- data/vendor/eigen/Eigen/SparseCore +69 -0
- data/vendor/eigen/Eigen/SparseLU +46 -0
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- data/vendor/eigen/Eigen/SuperLUSupport +64 -0
- data/vendor/eigen/Eigen/UmfPackSupport +40 -0
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
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- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
- data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
- data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
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- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
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- data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
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- data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
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- data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
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- data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
- data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
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- data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
- data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
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- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
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- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
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- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +745 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +126 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/eigen/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
- data/vendor/eigen/Eigen/src/misc/Image.h +82 -0
- data/vendor/eigen/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
- data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
- data/vendor/eigen/Eigen/src/misc/lapacke.h +16291 -0
- data/vendor/eigen/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +332 -0
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +552 -0
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +1058 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +163 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +85 -0
- data/vendor/eigen/README.md +3 -0
- data/vendor/eigen/bench/README.txt +55 -0
- data/vendor/eigen/bench/btl/COPYING +340 -0
- data/vendor/eigen/bench/btl/README +154 -0
- data/vendor/eigen/bench/tensors/README +21 -0
- data/vendor/eigen/blas/README.txt +6 -0
- data/vendor/eigen/demos/mandelbrot/README +10 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +9 -0
- data/vendor/eigen/demos/opengl/README +13 -0
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +1760 -0
- data/vendor/eigen/unsupported/README.txt +50 -0
- data/vendor/tomotopy/LICENSE +21 -0
- data/vendor/tomotopy/README.kr.rst +375 -0
- data/vendor/tomotopy/README.rst +382 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
- data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
- data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
- data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +374 -0
- data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
- data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.cpp +15 -0
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
- data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
- data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
- data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
- data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +588 -0
- data/vendor/tomotopy/src/TopicModel/LDA.h +144 -0
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
- data/vendor/tomotopy/src/TopicModel/LLDA.h +45 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +203 -0
- data/vendor/tomotopy/src/TopicModel/MGLDA.h +63 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +558 -0
- data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
- data/vendor/tomotopy/src/TopicModel/PLDA.h +17 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.cpp +13 -0
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +214 -0
- data/vendor/tomotopy/src/TopicModel/SLDA.h +54 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.cpp +17 -0
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +456 -0
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +692 -0
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +169 -0
- data/vendor/tomotopy/src/Utils/Dictionary.h +80 -0
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +181 -0
- data/vendor/tomotopy/src/Utils/LBFGS.h +202 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h +120 -0
- data/vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h +122 -0
- data/vendor/tomotopy/src/Utils/LBFGS/Param.h +213 -0
- data/vendor/tomotopy/src/Utils/LUT.hpp +82 -0
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
- data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
- data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
- data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
- data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
- data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
- data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
- data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
- data/vendor/tomotopy/src/Utils/exception.h +28 -0
- data/vendor/tomotopy/src/Utils/math.h +281 -0
- data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
- data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
- data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
- data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
- data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
- data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
- data/vendor/tomotopy/src/Utils/text.hpp +49 -0
- data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
- metadata +531 -0
@@ -0,0 +1,171 @@
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2007-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
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// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_MAP_H
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#define EIGEN_MAP_H
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namespace Eigen {
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namespace internal {
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template<typename PlainObjectType, int MapOptions, typename StrideType>
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struct traits<Map<PlainObjectType, MapOptions, StrideType> >
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: public traits<PlainObjectType>
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{
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typedef traits<PlainObjectType> TraitsBase;
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enum {
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PlainObjectTypeInnerSize = ((traits<PlainObjectType>::Flags&RowMajorBit)==RowMajorBit)
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? PlainObjectType::ColsAtCompileTime
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: PlainObjectType::RowsAtCompileTime,
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InnerStrideAtCompileTime = StrideType::InnerStrideAtCompileTime == 0
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? int(PlainObjectType::InnerStrideAtCompileTime)
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: int(StrideType::InnerStrideAtCompileTime),
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OuterStrideAtCompileTime = StrideType::OuterStrideAtCompileTime == 0
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? (InnerStrideAtCompileTime==Dynamic || PlainObjectTypeInnerSize==Dynamic
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? Dynamic
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: int(InnerStrideAtCompileTime) * int(PlainObjectTypeInnerSize))
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: int(StrideType::OuterStrideAtCompileTime),
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Alignment = int(MapOptions)&int(AlignedMask),
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Flags0 = TraitsBase::Flags & (~NestByRefBit),
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Flags = is_lvalue<PlainObjectType>::value ? int(Flags0) : (int(Flags0) & ~LvalueBit)
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};
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private:
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enum { Options }; // Expressions don't have Options
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};
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}
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/** \class Map
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* \ingroup Core_Module
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*
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* \brief A matrix or vector expression mapping an existing array of data.
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*
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* \tparam PlainObjectType the equivalent matrix type of the mapped data
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* \tparam MapOptions specifies the pointer alignment in bytes. It can be: \c #Aligned128, , \c #Aligned64, \c #Aligned32, \c #Aligned16, \c #Aligned8 or \c #Unaligned.
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* The default is \c #Unaligned.
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* \tparam StrideType optionally specifies strides. By default, Map assumes the memory layout
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* of an ordinary, contiguous array. This can be overridden by specifying strides.
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* The type passed here must be a specialization of the Stride template, see examples below.
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*
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* This class represents a matrix or vector expression mapping an existing array of data.
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* It can be used to let Eigen interface without any overhead with non-Eigen data structures,
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* such as plain C arrays or structures from other libraries. By default, it assumes that the
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* data is laid out contiguously in memory. You can however override this by explicitly specifying
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* inner and outer strides.
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*
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* Here's an example of simply mapping a contiguous array as a \ref TopicStorageOrders "column-major" matrix:
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* \include Map_simple.cpp
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* Output: \verbinclude Map_simple.out
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*
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* If you need to map non-contiguous arrays, you can do so by specifying strides:
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*
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* Here's an example of mapping an array as a vector, specifying an inner stride, that is, the pointer
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* increment between two consecutive coefficients. Here, we're specifying the inner stride as a compile-time
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* fixed value.
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* \include Map_inner_stride.cpp
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* Output: \verbinclude Map_inner_stride.out
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*
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* Here's an example of mapping an array while specifying an outer stride. Here, since we're mapping
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* as a column-major matrix, 'outer stride' means the pointer increment between two consecutive columns.
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* Here, we're specifying the outer stride as a runtime parameter. Note that here \c OuterStride<> is
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* a short version of \c OuterStride<Dynamic> because the default template parameter of OuterStride
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* is \c Dynamic
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* \include Map_outer_stride.cpp
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* Output: \verbinclude Map_outer_stride.out
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*
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* For more details and for an example of specifying both an inner and an outer stride, see class Stride.
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*
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* \b Tip: to change the array of data mapped by a Map object, you can use the C++
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* placement new syntax:
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*
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* Example: \include Map_placement_new.cpp
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* Output: \verbinclude Map_placement_new.out
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*
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* This class is the return type of PlainObjectBase::Map() but can also be used directly.
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*
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* \sa PlainObjectBase::Map(), \ref TopicStorageOrders
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*/
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template<typename PlainObjectType, int MapOptions, typename StrideType> class Map
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: public MapBase<Map<PlainObjectType, MapOptions, StrideType> >
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{
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public:
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typedef MapBase<Map> Base;
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EIGEN_DENSE_PUBLIC_INTERFACE(Map)
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typedef typename Base::PointerType PointerType;
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typedef PointerType PointerArgType;
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EIGEN_DEVICE_FUNC
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inline PointerType cast_to_pointer_type(PointerArgType ptr) { return ptr; }
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EIGEN_DEVICE_FUNC
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inline Index innerStride() const
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{
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return StrideType::InnerStrideAtCompileTime != 0 ? m_stride.inner() : 1;
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}
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EIGEN_DEVICE_FUNC
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inline Index outerStride() const
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{
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return int(StrideType::OuterStrideAtCompileTime) != 0 ? m_stride.outer()
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: int(internal::traits<Map>::OuterStrideAtCompileTime) != Dynamic ? Index(internal::traits<Map>::OuterStrideAtCompileTime)
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: IsVectorAtCompileTime ? (this->size() * innerStride())
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: (int(Flags)&RowMajorBit) ? (this->cols() * innerStride())
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: (this->rows() * innerStride());
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}
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/** Constructor in the fixed-size case.
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*
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* \param dataPtr pointer to the array to map
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* \param stride optional Stride object, passing the strides.
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*/
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EIGEN_DEVICE_FUNC
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explicit inline Map(PointerArgType dataPtr, const StrideType& stride = StrideType())
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: Base(cast_to_pointer_type(dataPtr)), m_stride(stride)
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{
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PlainObjectType::Base::_check_template_params();
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}
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/** Constructor in the dynamic-size vector case.
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*
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* \param dataPtr pointer to the array to map
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* \param size the size of the vector expression
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* \param stride optional Stride object, passing the strides.
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*/
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EIGEN_DEVICE_FUNC
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inline Map(PointerArgType dataPtr, Index size, const StrideType& stride = StrideType())
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: Base(cast_to_pointer_type(dataPtr), size), m_stride(stride)
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{
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PlainObjectType::Base::_check_template_params();
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}
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/** Constructor in the dynamic-size matrix case.
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*
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* \param dataPtr pointer to the array to map
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* \param rows the number of rows of the matrix expression
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* \param cols the number of columns of the matrix expression
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* \param stride optional Stride object, passing the strides.
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*/
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EIGEN_DEVICE_FUNC
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inline Map(PointerArgType dataPtr, Index rows, Index cols, const StrideType& stride = StrideType())
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: Base(cast_to_pointer_type(dataPtr), rows, cols), m_stride(stride)
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{
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PlainObjectType::Base::_check_template_params();
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}
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EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Map)
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protected:
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StrideType m_stride;
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};
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} // end namespace Eigen
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#endif // EIGEN_MAP_H
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2007-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
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// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
|
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_MAPBASE_H
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#define EIGEN_MAPBASE_H
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#define EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS(Derived) \
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EIGEN_STATIC_ASSERT((int(internal::evaluator<Derived>::Flags) & LinearAccessBit) || Derived::IsVectorAtCompileTime, \
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YOU_ARE_TRYING_TO_USE_AN_INDEX_BASED_ACCESSOR_ON_AN_EXPRESSION_THAT_DOES_NOT_SUPPORT_THAT)
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namespace Eigen {
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/** \ingroup Core_Module
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*
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* \brief Base class for dense Map and Block expression with direct access
|
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*
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* This base class provides the const low-level accessors (e.g. coeff, coeffRef) of dense
|
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* Map and Block objects with direct access.
|
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* Typical users do not have to directly deal with this class.
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*
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* This class can be extended by through the macro plugin \c EIGEN_MAPBASE_PLUGIN.
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* See \link TopicCustomizing_Plugins customizing Eigen \endlink for details.
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*
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* The \c Derived class has to provide the following two methods describing the memory layout:
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* \code Index innerStride() const; \endcode
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* \code Index outerStride() const; \endcode
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*
|
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* \sa class Map, class Block
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*/
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template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
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: public internal::dense_xpr_base<Derived>::type
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{
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public:
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typedef typename internal::dense_xpr_base<Derived>::type Base;
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enum {
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RowsAtCompileTime = internal::traits<Derived>::RowsAtCompileTime,
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ColsAtCompileTime = internal::traits<Derived>::ColsAtCompileTime,
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InnerStrideAtCompileTime = internal::traits<Derived>::InnerStrideAtCompileTime,
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SizeAtCompileTime = Base::SizeAtCompileTime
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};
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typedef typename internal::traits<Derived>::StorageKind StorageKind;
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typedef typename internal::traits<Derived>::Scalar Scalar;
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typedef typename internal::packet_traits<Scalar>::type PacketScalar;
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typedef typename NumTraits<Scalar>::Real RealScalar;
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typedef typename internal::conditional<
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bool(internal::is_lvalue<Derived>::value),
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Scalar *,
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const Scalar *>::type
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PointerType;
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using Base::derived;
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// using Base::RowsAtCompileTime;
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// using Base::ColsAtCompileTime;
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// using Base::SizeAtCompileTime;
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using Base::MaxRowsAtCompileTime;
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using Base::MaxColsAtCompileTime;
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using Base::MaxSizeAtCompileTime;
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using Base::IsVectorAtCompileTime;
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+
using Base::Flags;
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+
using Base::IsRowMajor;
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+
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using Base::rows;
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using Base::cols;
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+
using Base::size;
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using Base::coeff;
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using Base::coeffRef;
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+
using Base::lazyAssign;
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+
using Base::eval;
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+
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+
using Base::innerStride;
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using Base::outerStride;
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+
using Base::rowStride;
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+
using Base::colStride;
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+
|
84
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+
// bug 217 - compile error on ICC 11.1
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85
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+
using Base::operator=;
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86
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+
|
87
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+
typedef typename Base::CoeffReturnType CoeffReturnType;
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+
|
89
|
+
/** \copydoc DenseBase::rows() */
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+
EIGEN_DEVICE_FUNC inline Index rows() const { return m_rows.value(); }
|
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+
/** \copydoc DenseBase::cols() */
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+
EIGEN_DEVICE_FUNC inline Index cols() const { return m_cols.value(); }
|
93
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+
|
94
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+
/** Returns a pointer to the first coefficient of the matrix or vector.
|
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+
*
|
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|
+
* \note When addressing this data, make sure to honor the strides returned by innerStride() and outerStride().
|
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+
*
|
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+
* \sa innerStride(), outerStride()
|
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|
+
*/
|
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|
+
EIGEN_DEVICE_FUNC inline const Scalar* data() const { return m_data; }
|
101
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+
|
102
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+
/** \copydoc PlainObjectBase::coeff(Index,Index) const */
|
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+
EIGEN_DEVICE_FUNC
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|
+
inline const Scalar& coeff(Index rowId, Index colId) const
|
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|
+
{
|
106
|
+
return m_data[colId * colStride() + rowId * rowStride()];
|
107
|
+
}
|
108
|
+
|
109
|
+
/** \copydoc PlainObjectBase::coeff(Index) const */
|
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|
+
EIGEN_DEVICE_FUNC
|
111
|
+
inline const Scalar& coeff(Index index) const
|
112
|
+
{
|
113
|
+
EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS(Derived)
|
114
|
+
return m_data[index * innerStride()];
|
115
|
+
}
|
116
|
+
|
117
|
+
/** \copydoc PlainObjectBase::coeffRef(Index,Index) const */
|
118
|
+
EIGEN_DEVICE_FUNC
|
119
|
+
inline const Scalar& coeffRef(Index rowId, Index colId) const
|
120
|
+
{
|
121
|
+
return this->m_data[colId * colStride() + rowId * rowStride()];
|
122
|
+
}
|
123
|
+
|
124
|
+
/** \copydoc PlainObjectBase::coeffRef(Index) const */
|
125
|
+
EIGEN_DEVICE_FUNC
|
126
|
+
inline const Scalar& coeffRef(Index index) const
|
127
|
+
{
|
128
|
+
EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS(Derived)
|
129
|
+
return this->m_data[index * innerStride()];
|
130
|
+
}
|
131
|
+
|
132
|
+
/** \internal */
|
133
|
+
template<int LoadMode>
|
134
|
+
inline PacketScalar packet(Index rowId, Index colId) const
|
135
|
+
{
|
136
|
+
return internal::ploadt<PacketScalar, LoadMode>
|
137
|
+
(m_data + (colId * colStride() + rowId * rowStride()));
|
138
|
+
}
|
139
|
+
|
140
|
+
/** \internal */
|
141
|
+
template<int LoadMode>
|
142
|
+
inline PacketScalar packet(Index index) const
|
143
|
+
{
|
144
|
+
EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS(Derived)
|
145
|
+
return internal::ploadt<PacketScalar, LoadMode>(m_data + index * innerStride());
|
146
|
+
}
|
147
|
+
|
148
|
+
/** \internal Constructor for fixed size matrices or vectors */
|
149
|
+
EIGEN_DEVICE_FUNC
|
150
|
+
explicit inline MapBase(PointerType dataPtr) : m_data(dataPtr), m_rows(RowsAtCompileTime), m_cols(ColsAtCompileTime)
|
151
|
+
{
|
152
|
+
EIGEN_STATIC_ASSERT_FIXED_SIZE(Derived)
|
153
|
+
checkSanity<Derived>();
|
154
|
+
}
|
155
|
+
|
156
|
+
/** \internal Constructor for dynamically sized vectors */
|
157
|
+
EIGEN_DEVICE_FUNC
|
158
|
+
inline MapBase(PointerType dataPtr, Index vecSize)
|
159
|
+
: m_data(dataPtr),
|
160
|
+
m_rows(RowsAtCompileTime == Dynamic ? vecSize : Index(RowsAtCompileTime)),
|
161
|
+
m_cols(ColsAtCompileTime == Dynamic ? vecSize : Index(ColsAtCompileTime))
|
162
|
+
{
|
163
|
+
EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
|
164
|
+
eigen_assert(vecSize >= 0);
|
165
|
+
eigen_assert(dataPtr == 0 || SizeAtCompileTime == Dynamic || SizeAtCompileTime == vecSize);
|
166
|
+
checkSanity<Derived>();
|
167
|
+
}
|
168
|
+
|
169
|
+
/** \internal Constructor for dynamically sized matrices */
|
170
|
+
EIGEN_DEVICE_FUNC
|
171
|
+
inline MapBase(PointerType dataPtr, Index rows, Index cols)
|
172
|
+
: m_data(dataPtr), m_rows(rows), m_cols(cols)
|
173
|
+
{
|
174
|
+
eigen_assert( (dataPtr == 0)
|
175
|
+
|| ( rows >= 0 && (RowsAtCompileTime == Dynamic || RowsAtCompileTime == rows)
|
176
|
+
&& cols >= 0 && (ColsAtCompileTime == Dynamic || ColsAtCompileTime == cols)));
|
177
|
+
checkSanity<Derived>();
|
178
|
+
}
|
179
|
+
|
180
|
+
#ifdef EIGEN_MAPBASE_PLUGIN
|
181
|
+
#include EIGEN_MAPBASE_PLUGIN
|
182
|
+
#endif
|
183
|
+
|
184
|
+
protected:
|
185
|
+
|
186
|
+
template<typename T>
|
187
|
+
EIGEN_DEVICE_FUNC
|
188
|
+
void checkSanity(typename internal::enable_if<(internal::traits<T>::Alignment>0),void*>::type = 0) const
|
189
|
+
{
|
190
|
+
#if EIGEN_MAX_ALIGN_BYTES>0
|
191
|
+
// innerStride() is not set yet when this function is called, so we optimistically assume the lowest plausible value:
|
192
|
+
const Index minInnerStride = InnerStrideAtCompileTime == Dynamic ? 1 : Index(InnerStrideAtCompileTime);
|
193
|
+
EIGEN_ONLY_USED_FOR_DEBUG(minInnerStride);
|
194
|
+
eigen_assert(( ((internal::UIntPtr(m_data) % internal::traits<Derived>::Alignment) == 0)
|
195
|
+
|| (cols() * rows() * minInnerStride * sizeof(Scalar)) < internal::traits<Derived>::Alignment ) && "data is not aligned");
|
196
|
+
#endif
|
197
|
+
}
|
198
|
+
|
199
|
+
template<typename T>
|
200
|
+
EIGEN_DEVICE_FUNC
|
201
|
+
void checkSanity(typename internal::enable_if<internal::traits<T>::Alignment==0,void*>::type = 0) const
|
202
|
+
{}
|
203
|
+
|
204
|
+
PointerType m_data;
|
205
|
+
const internal::variable_if_dynamic<Index, RowsAtCompileTime> m_rows;
|
206
|
+
const internal::variable_if_dynamic<Index, ColsAtCompileTime> m_cols;
|
207
|
+
};
|
208
|
+
|
209
|
+
/** \ingroup Core_Module
|
210
|
+
*
|
211
|
+
* \brief Base class for non-const dense Map and Block expression with direct access
|
212
|
+
*
|
213
|
+
* This base class provides the non-const low-level accessors (e.g. coeff and coeffRef) of
|
214
|
+
* dense Map and Block objects with direct access.
|
215
|
+
* It inherits MapBase<Derived, ReadOnlyAccessors> which defines the const variant for reading specific entries.
|
216
|
+
*
|
217
|
+
* \sa class Map, class Block
|
218
|
+
*/
|
219
|
+
template<typename Derived> class MapBase<Derived, WriteAccessors>
|
220
|
+
: public MapBase<Derived, ReadOnlyAccessors>
|
221
|
+
{
|
222
|
+
typedef MapBase<Derived, ReadOnlyAccessors> ReadOnlyMapBase;
|
223
|
+
public:
|
224
|
+
|
225
|
+
typedef MapBase<Derived, ReadOnlyAccessors> Base;
|
226
|
+
|
227
|
+
typedef typename Base::Scalar Scalar;
|
228
|
+
typedef typename Base::PacketScalar PacketScalar;
|
229
|
+
typedef typename Base::StorageIndex StorageIndex;
|
230
|
+
typedef typename Base::PointerType PointerType;
|
231
|
+
|
232
|
+
using Base::derived;
|
233
|
+
using Base::rows;
|
234
|
+
using Base::cols;
|
235
|
+
using Base::size;
|
236
|
+
using Base::coeff;
|
237
|
+
using Base::coeffRef;
|
238
|
+
|
239
|
+
using Base::innerStride;
|
240
|
+
using Base::outerStride;
|
241
|
+
using Base::rowStride;
|
242
|
+
using Base::colStride;
|
243
|
+
|
244
|
+
typedef typename internal::conditional<
|
245
|
+
internal::is_lvalue<Derived>::value,
|
246
|
+
Scalar,
|
247
|
+
const Scalar
|
248
|
+
>::type ScalarWithConstIfNotLvalue;
|
249
|
+
|
250
|
+
EIGEN_DEVICE_FUNC
|
251
|
+
inline const Scalar* data() const { return this->m_data; }
|
252
|
+
EIGEN_DEVICE_FUNC
|
253
|
+
inline ScalarWithConstIfNotLvalue* data() { return this->m_data; } // no const-cast here so non-const-correct code will give a compile error
|
254
|
+
|
255
|
+
EIGEN_DEVICE_FUNC
|
256
|
+
inline ScalarWithConstIfNotLvalue& coeffRef(Index row, Index col)
|
257
|
+
{
|
258
|
+
return this->m_data[col * colStride() + row * rowStride()];
|
259
|
+
}
|
260
|
+
|
261
|
+
EIGEN_DEVICE_FUNC
|
262
|
+
inline ScalarWithConstIfNotLvalue& coeffRef(Index index)
|
263
|
+
{
|
264
|
+
EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS(Derived)
|
265
|
+
return this->m_data[index * innerStride()];
|
266
|
+
}
|
267
|
+
|
268
|
+
template<int StoreMode>
|
269
|
+
inline void writePacket(Index row, Index col, const PacketScalar& val)
|
270
|
+
{
|
271
|
+
internal::pstoret<Scalar, PacketScalar, StoreMode>
|
272
|
+
(this->m_data + (col * colStride() + row * rowStride()), val);
|
273
|
+
}
|
274
|
+
|
275
|
+
template<int StoreMode>
|
276
|
+
inline void writePacket(Index index, const PacketScalar& val)
|
277
|
+
{
|
278
|
+
EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS(Derived)
|
279
|
+
internal::pstoret<Scalar, PacketScalar, StoreMode>
|
280
|
+
(this->m_data + index * innerStride(), val);
|
281
|
+
}
|
282
|
+
|
283
|
+
EIGEN_DEVICE_FUNC explicit inline MapBase(PointerType dataPtr) : Base(dataPtr) {}
|
284
|
+
EIGEN_DEVICE_FUNC inline MapBase(PointerType dataPtr, Index vecSize) : Base(dataPtr, vecSize) {}
|
285
|
+
EIGEN_DEVICE_FUNC inline MapBase(PointerType dataPtr, Index rows, Index cols) : Base(dataPtr, rows, cols) {}
|
286
|
+
|
287
|
+
EIGEN_DEVICE_FUNC
|
288
|
+
Derived& operator=(const MapBase& other)
|
289
|
+
{
|
290
|
+
ReadOnlyMapBase::Base::operator=(other);
|
291
|
+
return derived();
|
292
|
+
}
|
293
|
+
|
294
|
+
// In theory we could simply refer to Base:Base::operator=, but MSVC does not like Base::Base,
|
295
|
+
// see bugs 821 and 920.
|
296
|
+
using ReadOnlyMapBase::Base::operator=;
|
297
|
+
};
|
298
|
+
|
299
|
+
#undef EIGEN_STATIC_ASSERT_INDEX_BASED_ACCESS
|
300
|
+
|
301
|
+
} // end namespace Eigen
|
302
|
+
|
303
|
+
#endif // EIGEN_MAPBASE_H
|