tomoto 0.1.0
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- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE.txt +22 -0
- data/README.md +123 -0
- data/ext/tomoto/ext.cpp +245 -0
- data/ext/tomoto/extconf.rb +28 -0
- data/lib/tomoto.rb +12 -0
- data/lib/tomoto/ct.rb +11 -0
- data/lib/tomoto/hdp.rb +11 -0
- data/lib/tomoto/lda.rb +67 -0
- data/lib/tomoto/version.rb +3 -0
- data/vendor/EigenRand/EigenRand/Core.h +1139 -0
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
- data/vendor/EigenRand/EigenRand/EigenRand +19 -0
- data/vendor/EigenRand/EigenRand/Macro.h +24 -0
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
- data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
- data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
- data/vendor/EigenRand/EigenRand/doc.h +220 -0
- data/vendor/EigenRand/LICENSE +21 -0
- data/vendor/EigenRand/README.md +288 -0
- data/vendor/eigen/COPYING.BSD +26 -0
- data/vendor/eigen/COPYING.GPL +674 -0
- data/vendor/eigen/COPYING.LGPL +502 -0
- data/vendor/eigen/COPYING.MINPACK +52 -0
- data/vendor/eigen/COPYING.MPL2 +373 -0
- data/vendor/eigen/COPYING.README +18 -0
- data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
- data/vendor/eigen/Eigen/Cholesky +46 -0
- data/vendor/eigen/Eigen/CholmodSupport +48 -0
- data/vendor/eigen/Eigen/Core +537 -0
- data/vendor/eigen/Eigen/Dense +7 -0
- data/vendor/eigen/Eigen/Eigen +2 -0
- data/vendor/eigen/Eigen/Eigenvalues +61 -0
- data/vendor/eigen/Eigen/Geometry +62 -0
- data/vendor/eigen/Eigen/Householder +30 -0
- data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/eigen/Eigen/Jacobi +33 -0
- data/vendor/eigen/Eigen/LU +50 -0
- data/vendor/eigen/Eigen/MetisSupport +35 -0
- data/vendor/eigen/Eigen/OrderingMethods +73 -0
- data/vendor/eigen/Eigen/PaStiXSupport +48 -0
- data/vendor/eigen/Eigen/PardisoSupport +35 -0
- data/vendor/eigen/Eigen/QR +51 -0
- data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
- data/vendor/eigen/Eigen/SPQRSupport +34 -0
- data/vendor/eigen/Eigen/SVD +51 -0
- data/vendor/eigen/Eigen/Sparse +36 -0
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- data/vendor/eigen/Eigen/SparseCore +69 -0
- data/vendor/eigen/Eigen/SparseLU +46 -0
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- data/vendor/eigen/Eigen/SuperLUSupport +64 -0
- data/vendor/eigen/Eigen/UmfPackSupport +40 -0
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
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- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
- data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
- data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
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- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
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- data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
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- data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
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- data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
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- data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
- data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
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- data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
- data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
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- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
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- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
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- metadata +531 -0
metadata
ADDED
@@ -0,0 +1,531 @@
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--- !ruby/object:Gem::Specification
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name: tomoto
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version: !ruby/object:Gem::Version
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version: 0.1.0
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platform: ruby
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6
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authors:
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7
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- Andrew Kane
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8
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autorequire:
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bindir: bin
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10
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cert_chain: []
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11
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+
date: 2020-10-09 00:00:00.000000000 Z
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dependencies:
|
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- !ruby/object:Gem::Dependency
|
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name: rice
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15
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+
requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '2.2'
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type: :runtime
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prerelease: false
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22
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+
version_requirements: !ruby/object:Gem::Requirement
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+
requirements:
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- - ">="
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- !ruby/object:Gem::Version
|
26
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version: '2.2'
|
27
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|
28
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name: bundler
|
29
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+
requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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32
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- !ruby/object:Gem::Version
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33
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version: '0'
|
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type: :development
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prerelease: false
|
36
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+
version_requirements: !ruby/object:Gem::Requirement
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+
requirements:
|
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- - ">="
|
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version: '0'
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name: rake
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requirement: !ruby/object:Gem::Requirement
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requirements:
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type: :development
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prerelease: false
|
50
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version_requirements: !ruby/object:Gem::Requirement
|
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requirements:
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|
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name: rake-compiler
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requirements:
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|
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version: '0'
|
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type: :development
|
63
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
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|
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|
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version: '5'
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type: :development
|
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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description:
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- vendor/tomotopy/src/TopicModel/DMRModel.cpp
|
444
|
+
- vendor/tomotopy/src/TopicModel/DMRModel.hpp
|
445
|
+
- vendor/tomotopy/src/TopicModel/DT.h
|
446
|
+
- vendor/tomotopy/src/TopicModel/DTM.h
|
447
|
+
- vendor/tomotopy/src/TopicModel/DTModel.cpp
|
448
|
+
- vendor/tomotopy/src/TopicModel/DTModel.hpp
|
449
|
+
- vendor/tomotopy/src/TopicModel/GDMR.h
|
450
|
+
- vendor/tomotopy/src/TopicModel/GDMRModel.cpp
|
451
|
+
- vendor/tomotopy/src/TopicModel/GDMRModel.hpp
|
452
|
+
- vendor/tomotopy/src/TopicModel/HDP.h
|
453
|
+
- vendor/tomotopy/src/TopicModel/HDPModel.cpp
|
454
|
+
- vendor/tomotopy/src/TopicModel/HDPModel.hpp
|
455
|
+
- vendor/tomotopy/src/TopicModel/HLDA.h
|
456
|
+
- vendor/tomotopy/src/TopicModel/HLDAModel.cpp
|
457
|
+
- vendor/tomotopy/src/TopicModel/HLDAModel.hpp
|
458
|
+
- vendor/tomotopy/src/TopicModel/HPA.h
|
459
|
+
- vendor/tomotopy/src/TopicModel/HPAModel.cpp
|
460
|
+
- vendor/tomotopy/src/TopicModel/HPAModel.hpp
|
461
|
+
- vendor/tomotopy/src/TopicModel/LDA.h
|
462
|
+
- vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp
|
463
|
+
- vendor/tomotopy/src/TopicModel/LDAModel.cpp
|
464
|
+
- vendor/tomotopy/src/TopicModel/LDAModel.hpp
|
465
|
+
- vendor/tomotopy/src/TopicModel/LLDA.h
|
466
|
+
- vendor/tomotopy/src/TopicModel/LLDAModel.cpp
|
467
|
+
- vendor/tomotopy/src/TopicModel/LLDAModel.hpp
|
468
|
+
- vendor/tomotopy/src/TopicModel/MGLDA.h
|
469
|
+
- vendor/tomotopy/src/TopicModel/MGLDAModel.cpp
|
470
|
+
- vendor/tomotopy/src/TopicModel/MGLDAModel.hpp
|
471
|
+
- vendor/tomotopy/src/TopicModel/PA.h
|
472
|
+
- vendor/tomotopy/src/TopicModel/PAModel.cpp
|
473
|
+
- vendor/tomotopy/src/TopicModel/PAModel.hpp
|
474
|
+
- vendor/tomotopy/src/TopicModel/PLDA.h
|
475
|
+
- vendor/tomotopy/src/TopicModel/PLDAModel.cpp
|
476
|
+
- vendor/tomotopy/src/TopicModel/PLDAModel.hpp
|
477
|
+
- vendor/tomotopy/src/TopicModel/SLDA.h
|
478
|
+
- vendor/tomotopy/src/TopicModel/SLDAModel.cpp
|
479
|
+
- vendor/tomotopy/src/TopicModel/SLDAModel.hpp
|
480
|
+
- vendor/tomotopy/src/TopicModel/TopicModel.hpp
|
481
|
+
- vendor/tomotopy/src/Utils/AliasMethod.hpp
|
482
|
+
- vendor/tomotopy/src/Utils/Dictionary.h
|
483
|
+
- vendor/tomotopy/src/Utils/EigenAddonOps.hpp
|
484
|
+
- vendor/tomotopy/src/Utils/LBFGS.h
|
485
|
+
- vendor/tomotopy/src/Utils/LBFGS/LineSearchBacktracking.h
|
486
|
+
- vendor/tomotopy/src/Utils/LBFGS/LineSearchBracketing.h
|
487
|
+
- vendor/tomotopy/src/Utils/LBFGS/Param.h
|
488
|
+
- vendor/tomotopy/src/Utils/LUT.hpp
|
489
|
+
- vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp
|
490
|
+
- vendor/tomotopy/src/Utils/PolyaGamma.hpp
|
491
|
+
- vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp
|
492
|
+
- vendor/tomotopy/src/Utils/ThreadPool.hpp
|
493
|
+
- vendor/tomotopy/src/Utils/Trie.hpp
|
494
|
+
- vendor/tomotopy/src/Utils/TruncMultiNormal.hpp
|
495
|
+
- vendor/tomotopy/src/Utils/Utils.hpp
|
496
|
+
- vendor/tomotopy/src/Utils/avx_gamma.h
|
497
|
+
- vendor/tomotopy/src/Utils/avx_mathfun.h
|
498
|
+
- vendor/tomotopy/src/Utils/exception.h
|
499
|
+
- vendor/tomotopy/src/Utils/math.h
|
500
|
+
- vendor/tomotopy/src/Utils/rtnorm.hpp
|
501
|
+
- vendor/tomotopy/src/Utils/sample.hpp
|
502
|
+
- vendor/tomotopy/src/Utils/serializer.hpp
|
503
|
+
- vendor/tomotopy/src/Utils/slp.hpp
|
504
|
+
- vendor/tomotopy/src/Utils/sse_gamma.h
|
505
|
+
- vendor/tomotopy/src/Utils/sse_mathfun.h
|
506
|
+
- vendor/tomotopy/src/Utils/text.hpp
|
507
|
+
- vendor/tomotopy/src/Utils/tvector.hpp
|
508
|
+
homepage: https://github.com/ankane/tomoto
|
509
|
+
licenses:
|
510
|
+
- MIT
|
511
|
+
metadata: {}
|
512
|
+
post_install_message:
|
513
|
+
rdoc_options: []
|
514
|
+
require_paths:
|
515
|
+
- lib
|
516
|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
517
|
+
requirements:
|
518
|
+
- - ">="
|
519
|
+
- !ruby/object:Gem::Version
|
520
|
+
version: '2.5'
|
521
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
522
|
+
requirements:
|
523
|
+
- - ">="
|
524
|
+
- !ruby/object:Gem::Version
|
525
|
+
version: '0'
|
526
|
+
requirements: []
|
527
|
+
rubygems_version: 3.1.2
|
528
|
+
signing_key:
|
529
|
+
specification_version: 4
|
530
|
+
summary: High performance topic modeling for Ruby
|
531
|
+
test_files: []
|