tomoto 0.1.0

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Files changed (420) hide show
  1. checksums.yaml +7 -0
  2. data/CHANGELOG.md +3 -0
  3. data/LICENSE.txt +22 -0
  4. data/README.md +123 -0
  5. data/ext/tomoto/ext.cpp +245 -0
  6. data/ext/tomoto/extconf.rb +28 -0
  7. data/lib/tomoto.rb +12 -0
  8. data/lib/tomoto/ct.rb +11 -0
  9. data/lib/tomoto/hdp.rb +11 -0
  10. data/lib/tomoto/lda.rb +67 -0
  11. data/lib/tomoto/version.rb +3 -0
  12. data/vendor/EigenRand/EigenRand/Core.h +1139 -0
  13. data/vendor/EigenRand/EigenRand/Dists/Basic.h +111 -0
  14. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +877 -0
  15. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +108 -0
  16. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +626 -0
  17. data/vendor/EigenRand/EigenRand/EigenRand +19 -0
  18. data/vendor/EigenRand/EigenRand/Macro.h +24 -0
  19. data/vendor/EigenRand/EigenRand/MorePacketMath.h +978 -0
  20. data/vendor/EigenRand/EigenRand/PacketFilter.h +286 -0
  21. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +624 -0
  22. data/vendor/EigenRand/EigenRand/RandUtils.h +413 -0
  23. data/vendor/EigenRand/EigenRand/doc.h +220 -0
  24. data/vendor/EigenRand/LICENSE +21 -0
  25. data/vendor/EigenRand/README.md +288 -0
  26. data/vendor/eigen/COPYING.BSD +26 -0
  27. data/vendor/eigen/COPYING.GPL +674 -0
  28. data/vendor/eigen/COPYING.LGPL +502 -0
  29. data/vendor/eigen/COPYING.MINPACK +52 -0
  30. data/vendor/eigen/COPYING.MPL2 +373 -0
  31. data/vendor/eigen/COPYING.README +18 -0
  32. data/vendor/eigen/Eigen/CMakeLists.txt +19 -0
  33. data/vendor/eigen/Eigen/Cholesky +46 -0
  34. data/vendor/eigen/Eigen/CholmodSupport +48 -0
  35. data/vendor/eigen/Eigen/Core +537 -0
  36. data/vendor/eigen/Eigen/Dense +7 -0
  37. data/vendor/eigen/Eigen/Eigen +2 -0
  38. data/vendor/eigen/Eigen/Eigenvalues +61 -0
  39. data/vendor/eigen/Eigen/Geometry +62 -0
  40. data/vendor/eigen/Eigen/Householder +30 -0
  41. data/vendor/eigen/Eigen/IterativeLinearSolvers +48 -0
  42. data/vendor/eigen/Eigen/Jacobi +33 -0
  43. data/vendor/eigen/Eigen/LU +50 -0
  44. data/vendor/eigen/Eigen/MetisSupport +35 -0
  45. data/vendor/eigen/Eigen/OrderingMethods +73 -0
  46. data/vendor/eigen/Eigen/PaStiXSupport +48 -0
  47. data/vendor/eigen/Eigen/PardisoSupport +35 -0
  48. data/vendor/eigen/Eigen/QR +51 -0
  49. data/vendor/eigen/Eigen/QtAlignedMalloc +40 -0
  50. data/vendor/eigen/Eigen/SPQRSupport +34 -0
  51. data/vendor/eigen/Eigen/SVD +51 -0
  52. data/vendor/eigen/Eigen/Sparse +36 -0
  53. data/vendor/eigen/Eigen/SparseCholesky +45 -0
  54. data/vendor/eigen/Eigen/SparseCore +69 -0
  55. data/vendor/eigen/Eigen/SparseLU +46 -0
  56. data/vendor/eigen/Eigen/SparseQR +37 -0
  57. data/vendor/eigen/Eigen/StdDeque +27 -0
  58. data/vendor/eigen/Eigen/StdList +26 -0
  59. data/vendor/eigen/Eigen/StdVector +27 -0
  60. data/vendor/eigen/Eigen/SuperLUSupport +64 -0
  61. data/vendor/eigen/Eigen/UmfPackSupport +40 -0
  62. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +673 -0
  63. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +542 -0
  64. data/vendor/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  65. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +639 -0
  66. data/vendor/eigen/Eigen/src/Core/Array.h +329 -0
  67. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +226 -0
  68. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +209 -0
  69. data/vendor/eigen/Eigen/src/Core/Assign.h +90 -0
  70. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +935 -0
  71. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +178 -0
  72. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +353 -0
  73. data/vendor/eigen/Eigen/src/Core/Block.h +452 -0
  74. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +164 -0
  75. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +160 -0
  76. data/vendor/eigen/Eigen/src/Core/ConditionEstimator.h +175 -0
  77. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +1688 -0
  78. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +127 -0
  79. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +184 -0
  80. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +866 -0
  81. data/vendor/eigen/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  82. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +128 -0
  84. data/vendor/eigen/Eigen/src/Core/DenseBase.h +611 -0
  85. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +681 -0
  86. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +570 -0
  87. data/vendor/eigen/Eigen/src/Core/Diagonal.h +260 -0
  88. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +343 -0
  89. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +28 -0
  90. data/vendor/eigen/Eigen/src/Core/Dot.h +318 -0
  91. data/vendor/eigen/Eigen/src/Core/EigenBase.h +159 -0
  92. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +146 -0
  93. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +155 -0
  94. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +455 -0
  95. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +593 -0
  96. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +187 -0
  97. data/vendor/eigen/Eigen/src/Core/IO.h +225 -0
  98. data/vendor/eigen/Eigen/src/Core/Inverse.h +118 -0
  99. data/vendor/eigen/Eigen/src/Core/Map.h +171 -0
  100. data/vendor/eigen/Eigen/src/Core/MapBase.h +303 -0
  101. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +1415 -0
  102. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +101 -0
  103. data/vendor/eigen/Eigen/src/Core/Matrix.h +459 -0
  104. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +529 -0
  105. data/vendor/eigen/Eigen/src/Core/NestByValue.h +110 -0
  106. data/vendor/eigen/Eigen/src/Core/NoAlias.h +108 -0
  107. data/vendor/eigen/Eigen/src/Core/NumTraits.h +248 -0
  108. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +633 -0
  109. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +1035 -0
  110. data/vendor/eigen/Eigen/src/Core/Product.h +186 -0
  111. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +1112 -0
  112. data/vendor/eigen/Eigen/src/Core/Random.h +182 -0
  113. data/vendor/eigen/Eigen/src/Core/Redux.h +505 -0
  114. data/vendor/eigen/Eigen/src/Core/Ref.h +283 -0
  115. data/vendor/eigen/Eigen/src/Core/Replicate.h +142 -0
  116. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +117 -0
  117. data/vendor/eigen/Eigen/src/Core/Reverse.h +211 -0
  118. data/vendor/eigen/Eigen/src/Core/Select.h +162 -0
  119. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +352 -0
  120. data/vendor/eigen/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  121. data/vendor/eigen/Eigen/src/Core/Solve.h +188 -0
  122. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +235 -0
  123. data/vendor/eigen/Eigen/src/Core/SolverBase.h +130 -0
  124. data/vendor/eigen/Eigen/src/Core/StableNorm.h +221 -0
  125. data/vendor/eigen/Eigen/src/Core/Stride.h +111 -0
  126. data/vendor/eigen/Eigen/src/Core/Swap.h +67 -0
  127. data/vendor/eigen/Eigen/src/Core/Transpose.h +403 -0
  128. data/vendor/eigen/Eigen/src/Core/Transpositions.h +407 -0
  129. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +983 -0
  130. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +96 -0
  131. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +695 -0
  132. data/vendor/eigen/Eigen/src/Core/Visitor.h +273 -0
  133. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +451 -0
  134. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +439 -0
  135. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +637 -0
  136. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +51 -0
  137. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +391 -0
  138. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1316 -0
  139. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +430 -0
  140. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +322 -0
  141. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +1061 -0
  142. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +103 -0
  143. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +674 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h +91 -0
  145. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +333 -0
  146. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +1124 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +212 -0
  148. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +29 -0
  149. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +49 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +490 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +91 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +760 -0
  153. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +471 -0
  154. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +562 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +895 -0
  156. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +77 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +397 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +137 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +945 -0
  160. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +168 -0
  161. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +475 -0
  162. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +188 -0
  163. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +136 -0
  164. data/vendor/eigen/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  165. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +792 -0
  166. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2156 -0
  167. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +492 -0
  168. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +311 -0
  169. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  170. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +122 -0
  171. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +619 -0
  172. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  173. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +163 -0
  174. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +521 -0
  175. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +287 -0
  176. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +260 -0
  177. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  178. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  179. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
  180. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +466 -0
  181. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +315 -0
  182. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  183. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  184. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +335 -0
  185. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +163 -0
  186. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +145 -0
  187. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +398 -0
  188. data/vendor/eigen/Eigen/src/Core/util/Constants.h +547 -0
  189. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +83 -0
  190. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
  191. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +130 -0
  192. data/vendor/eigen/Eigen/src/Core/util/Macros.h +1001 -0
  193. data/vendor/eigen/Eigen/src/Core/util/Memory.h +993 -0
  194. data/vendor/eigen/Eigen/src/Core/util/Meta.h +534 -0
  195. data/vendor/eigen/Eigen/src/Core/util/NonMPL2.h +3 -0
  196. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +27 -0
  197. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +218 -0
  198. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +821 -0
  199. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  200. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +459 -0
  201. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  202. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  203. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  204. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  205. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  206. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  207. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +654 -0
  208. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +546 -0
  209. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  210. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +870 -0
  211. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  212. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +556 -0
  213. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +392 -0
  214. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +247 -0
  215. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +114 -0
  216. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +497 -0
  217. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +282 -0
  218. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +234 -0
  219. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +195 -0
  220. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +814 -0
  221. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +199 -0
  222. data/vendor/eigen/Eigen/src/Geometry/RotationBase.h +206 -0
  223. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +170 -0
  224. data/vendor/eigen/Eigen/src/Geometry/Transform.h +1542 -0
  225. data/vendor/eigen/Eigen/src/Geometry/Translation.h +208 -0
  226. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +166 -0
  227. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +161 -0
  228. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +103 -0
  229. data/vendor/eigen/Eigen/src/Householder/Householder.h +172 -0
  230. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +470 -0
  231. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  232. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +228 -0
  233. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +246 -0
  234. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +400 -0
  235. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +462 -0
  236. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +394 -0
  237. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +216 -0
  238. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +115 -0
  239. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +462 -0
  240. data/vendor/eigen/Eigen/src/LU/Determinant.h +101 -0
  241. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +891 -0
  242. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +415 -0
  243. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +611 -0
  244. data/vendor/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  245. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +338 -0
  246. data/vendor/eigen/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  247. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +445 -0
  248. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +1843 -0
  249. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +157 -0
  250. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  251. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +543 -0
  252. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +653 -0
  253. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  254. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +562 -0
  255. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +676 -0
  256. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +409 -0
  257. data/vendor/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  258. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +313 -0
  259. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +1246 -0
  260. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +804 -0
  261. data/vendor/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  262. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +315 -0
  263. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  264. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +689 -0
  265. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
  266. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +377 -0
  267. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +258 -0
  268. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  269. data/vendor/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  270. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +216 -0
  271. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +603 -0
  272. data/vendor/eigen/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  273. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +341 -0
  274. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +726 -0
  275. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +148 -0
  276. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +320 -0
  277. data/vendor/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  278. data/vendor/eigen/Eigen/src/SparseCore/SparseDot.h +98 -0
  279. data/vendor/eigen/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  280. data/vendor/eigen/Eigen/src/SparseCore/SparseMap.h +305 -0
  281. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +1403 -0
  282. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +405 -0
  283. data/vendor/eigen/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  284. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +169 -0
  285. data/vendor/eigen/Eigen/src/SparseCore/SparseRedux.h +49 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +397 -0
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +656 -0
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +178 -0
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +478 -0
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +253 -0
  295. data/vendor/eigen/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  296. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +773 -0
  297. data/vendor/eigen/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  298. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  299. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  300. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +301 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
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  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
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  315. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +106 -0
  316. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +131 -0
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  318. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +1027 -0
  319. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +506 -0
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  322. data/vendor/eigen/Eigen/src/misc/RealSvd2x2.h +55 -0
  323. data/vendor/eigen/Eigen/src/misc/blas.h +440 -0
  324. data/vendor/eigen/Eigen/src/misc/lapack.h +152 -0
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  348. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +362 -0
  349. data/vendor/tomotopy/src/Labeling/FoRelevance.h +88 -0
  350. data/vendor/tomotopy/src/Labeling/Labeler.h +50 -0
  351. data/vendor/tomotopy/src/TopicModel/CT.h +37 -0
  352. data/vendor/tomotopy/src/TopicModel/CTModel.cpp +13 -0
  353. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +293 -0
  354. data/vendor/tomotopy/src/TopicModel/DMR.h +51 -0
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  357. data/vendor/tomotopy/src/TopicModel/DT.h +65 -0
  358. data/vendor/tomotopy/src/TopicModel/DTM.h +22 -0
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  360. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +572 -0
  361. data/vendor/tomotopy/src/TopicModel/GDMR.h +37 -0
  362. data/vendor/tomotopy/src/TopicModel/GDMRModel.cpp +14 -0
  363. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +485 -0
  364. data/vendor/tomotopy/src/TopicModel/HDP.h +74 -0
  365. data/vendor/tomotopy/src/TopicModel/HDPModel.cpp +13 -0
  366. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +592 -0
  367. data/vendor/tomotopy/src/TopicModel/HLDA.h +40 -0
  368. data/vendor/tomotopy/src/TopicModel/HLDAModel.cpp +13 -0
  369. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +681 -0
  370. data/vendor/tomotopy/src/TopicModel/HPA.h +27 -0
  371. data/vendor/tomotopy/src/TopicModel/HPAModel.cpp +21 -0
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  374. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +442 -0
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  376. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +1058 -0
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  382. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +558 -0
  383. data/vendor/tomotopy/src/TopicModel/PA.h +43 -0
  384. data/vendor/tomotopy/src/TopicModel/PAModel.cpp +13 -0
  385. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +467 -0
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  401. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +69 -0
  402. data/vendor/tomotopy/src/Utils/PolyaGamma.hpp +200 -0
  403. data/vendor/tomotopy/src/Utils/PolyaGammaHybrid.hpp +672 -0
  404. data/vendor/tomotopy/src/Utils/ThreadPool.hpp +150 -0
  405. data/vendor/tomotopy/src/Utils/Trie.hpp +220 -0
  406. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +94 -0
  407. data/vendor/tomotopy/src/Utils/Utils.hpp +337 -0
  408. data/vendor/tomotopy/src/Utils/avx_gamma.h +46 -0
  409. data/vendor/tomotopy/src/Utils/avx_mathfun.h +736 -0
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  412. data/vendor/tomotopy/src/Utils/rtnorm.hpp +2690 -0
  413. data/vendor/tomotopy/src/Utils/sample.hpp +192 -0
  414. data/vendor/tomotopy/src/Utils/serializer.hpp +695 -0
  415. data/vendor/tomotopy/src/Utils/slp.hpp +131 -0
  416. data/vendor/tomotopy/src/Utils/sse_gamma.h +48 -0
  417. data/vendor/tomotopy/src/Utils/sse_mathfun.h +710 -0
  418. data/vendor/tomotopy/src/Utils/text.hpp +49 -0
  419. data/vendor/tomotopy/src/Utils/tvector.hpp +543 -0
  420. metadata +531 -0
@@ -0,0 +1,199 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_ROTATION2D_H
11
+ #define EIGEN_ROTATION2D_H
12
+
13
+ namespace Eigen {
14
+
15
+ /** \geometry_module \ingroup Geometry_Module
16
+ *
17
+ * \class Rotation2D
18
+ *
19
+ * \brief Represents a rotation/orientation in a 2 dimensional space.
20
+ *
21
+ * \tparam _Scalar the scalar type, i.e., the type of the coefficients
22
+ *
23
+ * This class is equivalent to a single scalar representing a counter clock wise rotation
24
+ * as a single angle in radian. It provides some additional features such as the automatic
25
+ * conversion from/to a 2x2 rotation matrix. Moreover this class aims to provide a similar
26
+ * interface to Quaternion in order to facilitate the writing of generic algorithms
27
+ * dealing with rotations.
28
+ *
29
+ * \sa class Quaternion, class Transform
30
+ */
31
+
32
+ namespace internal {
33
+
34
+ template<typename _Scalar> struct traits<Rotation2D<_Scalar> >
35
+ {
36
+ typedef _Scalar Scalar;
37
+ };
38
+ } // end namespace internal
39
+
40
+ template<typename _Scalar>
41
+ class Rotation2D : public RotationBase<Rotation2D<_Scalar>,2>
42
+ {
43
+ typedef RotationBase<Rotation2D<_Scalar>,2> Base;
44
+
45
+ public:
46
+
47
+ using Base::operator*;
48
+
49
+ enum { Dim = 2 };
50
+ /** the scalar type of the coefficients */
51
+ typedef _Scalar Scalar;
52
+ typedef Matrix<Scalar,2,1> Vector2;
53
+ typedef Matrix<Scalar,2,2> Matrix2;
54
+
55
+ protected:
56
+
57
+ Scalar m_angle;
58
+
59
+ public:
60
+
61
+ /** Construct a 2D counter clock wise rotation from the angle \a a in radian. */
62
+ EIGEN_DEVICE_FUNC explicit inline Rotation2D(const Scalar& a) : m_angle(a) {}
63
+
64
+ /** Default constructor wihtout initialization. The represented rotation is undefined. */
65
+ EIGEN_DEVICE_FUNC Rotation2D() {}
66
+
67
+ /** Construct a 2D rotation from a 2x2 rotation matrix \a mat.
68
+ *
69
+ * \sa fromRotationMatrix()
70
+ */
71
+ template<typename Derived>
72
+ EIGEN_DEVICE_FUNC explicit Rotation2D(const MatrixBase<Derived>& m)
73
+ {
74
+ fromRotationMatrix(m.derived());
75
+ }
76
+
77
+ /** \returns the rotation angle */
78
+ EIGEN_DEVICE_FUNC inline Scalar angle() const { return m_angle; }
79
+
80
+ /** \returns a read-write reference to the rotation angle */
81
+ EIGEN_DEVICE_FUNC inline Scalar& angle() { return m_angle; }
82
+
83
+ /** \returns the rotation angle in [0,2pi] */
84
+ EIGEN_DEVICE_FUNC inline Scalar smallestPositiveAngle() const {
85
+ Scalar tmp = numext::fmod(m_angle,Scalar(2*EIGEN_PI));
86
+ return tmp<Scalar(0) ? tmp + Scalar(2*EIGEN_PI) : tmp;
87
+ }
88
+
89
+ /** \returns the rotation angle in [-pi,pi] */
90
+ EIGEN_DEVICE_FUNC inline Scalar smallestAngle() const {
91
+ Scalar tmp = numext::fmod(m_angle,Scalar(2*EIGEN_PI));
92
+ if(tmp>Scalar(EIGEN_PI)) tmp -= Scalar(2*EIGEN_PI);
93
+ else if(tmp<-Scalar(EIGEN_PI)) tmp += Scalar(2*EIGEN_PI);
94
+ return tmp;
95
+ }
96
+
97
+ /** \returns the inverse rotation */
98
+ EIGEN_DEVICE_FUNC inline Rotation2D inverse() const { return Rotation2D(-m_angle); }
99
+
100
+ /** Concatenates two rotations */
101
+ EIGEN_DEVICE_FUNC inline Rotation2D operator*(const Rotation2D& other) const
102
+ { return Rotation2D(m_angle + other.m_angle); }
103
+
104
+ /** Concatenates two rotations */
105
+ EIGEN_DEVICE_FUNC inline Rotation2D& operator*=(const Rotation2D& other)
106
+ { m_angle += other.m_angle; return *this; }
107
+
108
+ /** Applies the rotation to a 2D vector */
109
+ EIGEN_DEVICE_FUNC Vector2 operator* (const Vector2& vec) const
110
+ { return toRotationMatrix() * vec; }
111
+
112
+ template<typename Derived>
113
+ EIGEN_DEVICE_FUNC Rotation2D& fromRotationMatrix(const MatrixBase<Derived>& m);
114
+ EIGEN_DEVICE_FUNC Matrix2 toRotationMatrix() const;
115
+
116
+ /** Set \c *this from a 2x2 rotation matrix \a mat.
117
+ * In other words, this function extract the rotation angle from the rotation matrix.
118
+ *
119
+ * This method is an alias for fromRotationMatrix()
120
+ *
121
+ * \sa fromRotationMatrix()
122
+ */
123
+ template<typename Derived>
124
+ EIGEN_DEVICE_FUNC Rotation2D& operator=(const MatrixBase<Derived>& m)
125
+ { return fromRotationMatrix(m.derived()); }
126
+
127
+ /** \returns the spherical interpolation between \c *this and \a other using
128
+ * parameter \a t. It is in fact equivalent to a linear interpolation.
129
+ */
130
+ EIGEN_DEVICE_FUNC inline Rotation2D slerp(const Scalar& t, const Rotation2D& other) const
131
+ {
132
+ Scalar dist = Rotation2D(other.m_angle-m_angle).smallestAngle();
133
+ return Rotation2D(m_angle + dist*t);
134
+ }
135
+
136
+ /** \returns \c *this with scalar type casted to \a NewScalarType
137
+ *
138
+ * Note that if \a NewScalarType is equal to the current scalar type of \c *this
139
+ * then this function smartly returns a const reference to \c *this.
140
+ */
141
+ template<typename NewScalarType>
142
+ EIGEN_DEVICE_FUNC inline typename internal::cast_return_type<Rotation2D,Rotation2D<NewScalarType> >::type cast() const
143
+ { return typename internal::cast_return_type<Rotation2D,Rotation2D<NewScalarType> >::type(*this); }
144
+
145
+ /** Copy constructor with scalar type conversion */
146
+ template<typename OtherScalarType>
147
+ EIGEN_DEVICE_FUNC inline explicit Rotation2D(const Rotation2D<OtherScalarType>& other)
148
+ {
149
+ m_angle = Scalar(other.angle());
150
+ }
151
+
152
+ EIGEN_DEVICE_FUNC static inline Rotation2D Identity() { return Rotation2D(0); }
153
+
154
+ /** \returns \c true if \c *this is approximately equal to \a other, within the precision
155
+ * determined by \a prec.
156
+ *
157
+ * \sa MatrixBase::isApprox() */
158
+ EIGEN_DEVICE_FUNC bool isApprox(const Rotation2D& other, const typename NumTraits<Scalar>::Real& prec = NumTraits<Scalar>::dummy_precision()) const
159
+ { return internal::isApprox(m_angle,other.m_angle, prec); }
160
+
161
+ };
162
+
163
+ /** \ingroup Geometry_Module
164
+ * single precision 2D rotation type */
165
+ typedef Rotation2D<float> Rotation2Df;
166
+ /** \ingroup Geometry_Module
167
+ * double precision 2D rotation type */
168
+ typedef Rotation2D<double> Rotation2Dd;
169
+
170
+ /** Set \c *this from a 2x2 rotation matrix \a mat.
171
+ * In other words, this function extract the rotation angle
172
+ * from the rotation matrix.
173
+ */
174
+ template<typename Scalar>
175
+ template<typename Derived>
176
+ EIGEN_DEVICE_FUNC Rotation2D<Scalar>& Rotation2D<Scalar>::fromRotationMatrix(const MatrixBase<Derived>& mat)
177
+ {
178
+ EIGEN_USING_STD_MATH(atan2)
179
+ EIGEN_STATIC_ASSERT(Derived::RowsAtCompileTime==2 && Derived::ColsAtCompileTime==2,YOU_MADE_A_PROGRAMMING_MISTAKE)
180
+ m_angle = atan2(mat.coeff(1,0), mat.coeff(0,0));
181
+ return *this;
182
+ }
183
+
184
+ /** Constructs and \returns an equivalent 2x2 rotation matrix.
185
+ */
186
+ template<typename Scalar>
187
+ typename Rotation2D<Scalar>::Matrix2
188
+ EIGEN_DEVICE_FUNC Rotation2D<Scalar>::toRotationMatrix(void) const
189
+ {
190
+ EIGEN_USING_STD_MATH(sin)
191
+ EIGEN_USING_STD_MATH(cos)
192
+ Scalar sinA = sin(m_angle);
193
+ Scalar cosA = cos(m_angle);
194
+ return (Matrix2() << cosA, -sinA, sinA, cosA).finished();
195
+ }
196
+
197
+ } // end namespace Eigen
198
+
199
+ #endif // EIGEN_ROTATION2D_H
@@ -0,0 +1,206 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_ROTATIONBASE_H
11
+ #define EIGEN_ROTATIONBASE_H
12
+
13
+ namespace Eigen {
14
+
15
+ // forward declaration
16
+ namespace internal {
17
+ template<typename RotationDerived, typename MatrixType, bool IsVector=MatrixType::IsVectorAtCompileTime>
18
+ struct rotation_base_generic_product_selector;
19
+ }
20
+
21
+ /** \class RotationBase
22
+ *
23
+ * \brief Common base class for compact rotation representations
24
+ *
25
+ * \tparam Derived is the derived type, i.e., a rotation type
26
+ * \tparam _Dim the dimension of the space
27
+ */
28
+ template<typename Derived, int _Dim>
29
+ class RotationBase
30
+ {
31
+ public:
32
+ enum { Dim = _Dim };
33
+ /** the scalar type of the coefficients */
34
+ typedef typename internal::traits<Derived>::Scalar Scalar;
35
+
36
+ /** corresponding linear transformation matrix type */
37
+ typedef Matrix<Scalar,Dim,Dim> RotationMatrixType;
38
+ typedef Matrix<Scalar,Dim,1> VectorType;
39
+
40
+ public:
41
+ EIGEN_DEVICE_FUNC inline const Derived& derived() const { return *static_cast<const Derived*>(this); }
42
+ EIGEN_DEVICE_FUNC inline Derived& derived() { return *static_cast<Derived*>(this); }
43
+
44
+ /** \returns an equivalent rotation matrix */
45
+ EIGEN_DEVICE_FUNC inline RotationMatrixType toRotationMatrix() const { return derived().toRotationMatrix(); }
46
+
47
+ /** \returns an equivalent rotation matrix
48
+ * This function is added to be conform with the Transform class' naming scheme.
49
+ */
50
+ EIGEN_DEVICE_FUNC inline RotationMatrixType matrix() const { return derived().toRotationMatrix(); }
51
+
52
+ /** \returns the inverse rotation */
53
+ EIGEN_DEVICE_FUNC inline Derived inverse() const { return derived().inverse(); }
54
+
55
+ /** \returns the concatenation of the rotation \c *this with a translation \a t */
56
+ EIGEN_DEVICE_FUNC inline Transform<Scalar,Dim,Isometry> operator*(const Translation<Scalar,Dim>& t) const
57
+ { return Transform<Scalar,Dim,Isometry>(*this) * t; }
58
+
59
+ /** \returns the concatenation of the rotation \c *this with a uniform scaling \a s */
60
+ EIGEN_DEVICE_FUNC inline RotationMatrixType operator*(const UniformScaling<Scalar>& s) const
61
+ { return toRotationMatrix() * s.factor(); }
62
+
63
+ /** \returns the concatenation of the rotation \c *this with a generic expression \a e
64
+ * \a e can be:
65
+ * - a DimxDim linear transformation matrix
66
+ * - a DimxDim diagonal matrix (axis aligned scaling)
67
+ * - a vector of size Dim
68
+ */
69
+ template<typename OtherDerived>
70
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::rotation_base_generic_product_selector<Derived,OtherDerived,OtherDerived::IsVectorAtCompileTime>::ReturnType
71
+ operator*(const EigenBase<OtherDerived>& e) const
72
+ { return internal::rotation_base_generic_product_selector<Derived,OtherDerived>::run(derived(), e.derived()); }
73
+
74
+ /** \returns the concatenation of a linear transformation \a l with the rotation \a r */
75
+ template<typename OtherDerived> friend
76
+ EIGEN_DEVICE_FUNC inline RotationMatrixType operator*(const EigenBase<OtherDerived>& l, const Derived& r)
77
+ { return l.derived() * r.toRotationMatrix(); }
78
+
79
+ /** \returns the concatenation of a scaling \a l with the rotation \a r */
80
+ EIGEN_DEVICE_FUNC friend inline Transform<Scalar,Dim,Affine> operator*(const DiagonalMatrix<Scalar,Dim>& l, const Derived& r)
81
+ {
82
+ Transform<Scalar,Dim,Affine> res(r);
83
+ res.linear().applyOnTheLeft(l);
84
+ return res;
85
+ }
86
+
87
+ /** \returns the concatenation of the rotation \c *this with a transformation \a t */
88
+ template<int Mode, int Options>
89
+ EIGEN_DEVICE_FUNC inline Transform<Scalar,Dim,Mode> operator*(const Transform<Scalar,Dim,Mode,Options>& t) const
90
+ { return toRotationMatrix() * t; }
91
+
92
+ template<typename OtherVectorType>
93
+ EIGEN_DEVICE_FUNC inline VectorType _transformVector(const OtherVectorType& v) const
94
+ { return toRotationMatrix() * v; }
95
+ };
96
+
97
+ namespace internal {
98
+
99
+ // implementation of the generic product rotation * matrix
100
+ template<typename RotationDerived, typename MatrixType>
101
+ struct rotation_base_generic_product_selector<RotationDerived,MatrixType,false>
102
+ {
103
+ enum { Dim = RotationDerived::Dim };
104
+ typedef Matrix<typename RotationDerived::Scalar,Dim,Dim> ReturnType;
105
+ EIGEN_DEVICE_FUNC static inline ReturnType run(const RotationDerived& r, const MatrixType& m)
106
+ { return r.toRotationMatrix() * m; }
107
+ };
108
+
109
+ template<typename RotationDerived, typename Scalar, int Dim, int MaxDim>
110
+ struct rotation_base_generic_product_selector< RotationDerived, DiagonalMatrix<Scalar,Dim,MaxDim>, false >
111
+ {
112
+ typedef Transform<Scalar,Dim,Affine> ReturnType;
113
+ EIGEN_DEVICE_FUNC static inline ReturnType run(const RotationDerived& r, const DiagonalMatrix<Scalar,Dim,MaxDim>& m)
114
+ {
115
+ ReturnType res(r);
116
+ res.linear() *= m;
117
+ return res;
118
+ }
119
+ };
120
+
121
+ template<typename RotationDerived,typename OtherVectorType>
122
+ struct rotation_base_generic_product_selector<RotationDerived,OtherVectorType,true>
123
+ {
124
+ enum { Dim = RotationDerived::Dim };
125
+ typedef Matrix<typename RotationDerived::Scalar,Dim,1> ReturnType;
126
+ EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE ReturnType run(const RotationDerived& r, const OtherVectorType& v)
127
+ {
128
+ return r._transformVector(v);
129
+ }
130
+ };
131
+
132
+ } // end namespace internal
133
+
134
+ /** \geometry_module
135
+ *
136
+ * \brief Constructs a Dim x Dim rotation matrix from the rotation \a r
137
+ */
138
+ template<typename _Scalar, int _Rows, int _Cols, int _Storage, int _MaxRows, int _MaxCols>
139
+ template<typename OtherDerived>
140
+ EIGEN_DEVICE_FUNC Matrix<_Scalar, _Rows, _Cols, _Storage, _MaxRows, _MaxCols>
141
+ ::Matrix(const RotationBase<OtherDerived,ColsAtCompileTime>& r)
142
+ {
143
+ EIGEN_STATIC_ASSERT_MATRIX_SPECIFIC_SIZE(Matrix,int(OtherDerived::Dim),int(OtherDerived::Dim))
144
+ *this = r.toRotationMatrix();
145
+ }
146
+
147
+ /** \geometry_module
148
+ *
149
+ * \brief Set a Dim x Dim rotation matrix from the rotation \a r
150
+ */
151
+ template<typename _Scalar, int _Rows, int _Cols, int _Storage, int _MaxRows, int _MaxCols>
152
+ template<typename OtherDerived>
153
+ EIGEN_DEVICE_FUNC Matrix<_Scalar, _Rows, _Cols, _Storage, _MaxRows, _MaxCols>&
154
+ Matrix<_Scalar, _Rows, _Cols, _Storage, _MaxRows, _MaxCols>
155
+ ::operator=(const RotationBase<OtherDerived,ColsAtCompileTime>& r)
156
+ {
157
+ EIGEN_STATIC_ASSERT_MATRIX_SPECIFIC_SIZE(Matrix,int(OtherDerived::Dim),int(OtherDerived::Dim))
158
+ return *this = r.toRotationMatrix();
159
+ }
160
+
161
+ namespace internal {
162
+
163
+ /** \internal
164
+ *
165
+ * Helper function to return an arbitrary rotation object to a rotation matrix.
166
+ *
167
+ * \tparam Scalar the numeric type of the matrix coefficients
168
+ * \tparam Dim the dimension of the current space
169
+ *
170
+ * It returns a Dim x Dim fixed size matrix.
171
+ *
172
+ * Default specializations are provided for:
173
+ * - any scalar type (2D),
174
+ * - any matrix expression,
175
+ * - any type based on RotationBase (e.g., Quaternion, AngleAxis, Rotation2D)
176
+ *
177
+ * Currently toRotationMatrix is only used by Transform.
178
+ *
179
+ * \sa class Transform, class Rotation2D, class Quaternion, class AngleAxis
180
+ */
181
+ template<typename Scalar, int Dim>
182
+ EIGEN_DEVICE_FUNC static inline Matrix<Scalar,2,2> toRotationMatrix(const Scalar& s)
183
+ {
184
+ EIGEN_STATIC_ASSERT(Dim==2,YOU_MADE_A_PROGRAMMING_MISTAKE)
185
+ return Rotation2D<Scalar>(s).toRotationMatrix();
186
+ }
187
+
188
+ template<typename Scalar, int Dim, typename OtherDerived>
189
+ EIGEN_DEVICE_FUNC static inline Matrix<Scalar,Dim,Dim> toRotationMatrix(const RotationBase<OtherDerived,Dim>& r)
190
+ {
191
+ return r.toRotationMatrix();
192
+ }
193
+
194
+ template<typename Scalar, int Dim, typename OtherDerived>
195
+ EIGEN_DEVICE_FUNC static inline const MatrixBase<OtherDerived>& toRotationMatrix(const MatrixBase<OtherDerived>& mat)
196
+ {
197
+ EIGEN_STATIC_ASSERT(OtherDerived::RowsAtCompileTime==Dim && OtherDerived::ColsAtCompileTime==Dim,
198
+ YOU_MADE_A_PROGRAMMING_MISTAKE)
199
+ return mat;
200
+ }
201
+
202
+ } // end namespace internal
203
+
204
+ } // end namespace Eigen
205
+
206
+ #endif // EIGEN_ROTATIONBASE_H
@@ -0,0 +1,170 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_SCALING_H
11
+ #define EIGEN_SCALING_H
12
+
13
+ namespace Eigen {
14
+
15
+ /** \geometry_module \ingroup Geometry_Module
16
+ *
17
+ * \class Scaling
18
+ *
19
+ * \brief Represents a generic uniform scaling transformation
20
+ *
21
+ * \tparam _Scalar the scalar type, i.e., the type of the coefficients.
22
+ *
23
+ * This class represent a uniform scaling transformation. It is the return
24
+ * type of Scaling(Scalar), and most of the time this is the only way it
25
+ * is used. In particular, this class is not aimed to be used to store a scaling transformation,
26
+ * but rather to make easier the constructions and updates of Transform objects.
27
+ *
28
+ * To represent an axis aligned scaling, use the DiagonalMatrix class.
29
+ *
30
+ * \sa Scaling(), class DiagonalMatrix, MatrixBase::asDiagonal(), class Translation, class Transform
31
+ */
32
+ template<typename _Scalar>
33
+ class UniformScaling
34
+ {
35
+ public:
36
+ /** the scalar type of the coefficients */
37
+ typedef _Scalar Scalar;
38
+
39
+ protected:
40
+
41
+ Scalar m_factor;
42
+
43
+ public:
44
+
45
+ /** Default constructor without initialization. */
46
+ UniformScaling() {}
47
+ /** Constructs and initialize a uniform scaling transformation */
48
+ explicit inline UniformScaling(const Scalar& s) : m_factor(s) {}
49
+
50
+ inline const Scalar& factor() const { return m_factor; }
51
+ inline Scalar& factor() { return m_factor; }
52
+
53
+ /** Concatenates two uniform scaling */
54
+ inline UniformScaling operator* (const UniformScaling& other) const
55
+ { return UniformScaling(m_factor * other.factor()); }
56
+
57
+ /** Concatenates a uniform scaling and a translation */
58
+ template<int Dim>
59
+ inline Transform<Scalar,Dim,Affine> operator* (const Translation<Scalar,Dim>& t) const;
60
+
61
+ /** Concatenates a uniform scaling and an affine transformation */
62
+ template<int Dim, int Mode, int Options>
63
+ inline Transform<Scalar,Dim,(int(Mode)==int(Isometry)?Affine:Mode)> operator* (const Transform<Scalar,Dim, Mode, Options>& t) const
64
+ {
65
+ Transform<Scalar,Dim,(int(Mode)==int(Isometry)?Affine:Mode)> res = t;
66
+ res.prescale(factor());
67
+ return res;
68
+ }
69
+
70
+ /** Concatenates a uniform scaling and a linear transformation matrix */
71
+ // TODO returns an expression
72
+ template<typename Derived>
73
+ inline typename internal::plain_matrix_type<Derived>::type operator* (const MatrixBase<Derived>& other) const
74
+ { return other * m_factor; }
75
+
76
+ template<typename Derived,int Dim>
77
+ inline Matrix<Scalar,Dim,Dim> operator*(const RotationBase<Derived,Dim>& r) const
78
+ { return r.toRotationMatrix() * m_factor; }
79
+
80
+ /** \returns the inverse scaling */
81
+ inline UniformScaling inverse() const
82
+ { return UniformScaling(Scalar(1)/m_factor); }
83
+
84
+ /** \returns \c *this with scalar type casted to \a NewScalarType
85
+ *
86
+ * Note that if \a NewScalarType is equal to the current scalar type of \c *this
87
+ * then this function smartly returns a const reference to \c *this.
88
+ */
89
+ template<typename NewScalarType>
90
+ inline UniformScaling<NewScalarType> cast() const
91
+ { return UniformScaling<NewScalarType>(NewScalarType(m_factor)); }
92
+
93
+ /** Copy constructor with scalar type conversion */
94
+ template<typename OtherScalarType>
95
+ inline explicit UniformScaling(const UniformScaling<OtherScalarType>& other)
96
+ { m_factor = Scalar(other.factor()); }
97
+
98
+ /** \returns \c true if \c *this is approximately equal to \a other, within the precision
99
+ * determined by \a prec.
100
+ *
101
+ * \sa MatrixBase::isApprox() */
102
+ bool isApprox(const UniformScaling& other, const typename NumTraits<Scalar>::Real& prec = NumTraits<Scalar>::dummy_precision()) const
103
+ { return internal::isApprox(m_factor, other.factor(), prec); }
104
+
105
+ };
106
+
107
+ /** \addtogroup Geometry_Module */
108
+ //@{
109
+
110
+ /** Concatenates a linear transformation matrix and a uniform scaling
111
+ * \relates UniformScaling
112
+ */
113
+ // NOTE this operator is defiend in MatrixBase and not as a friend function
114
+ // of UniformScaling to fix an internal crash of Intel's ICC
115
+ template<typename Derived,typename Scalar>
116
+ EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(Derived,Scalar,product)
117
+ operator*(const MatrixBase<Derived>& matrix, const UniformScaling<Scalar>& s)
118
+ { return matrix.derived() * s.factor(); }
119
+
120
+ /** Constructs a uniform scaling from scale factor \a s */
121
+ inline UniformScaling<float> Scaling(float s) { return UniformScaling<float>(s); }
122
+ /** Constructs a uniform scaling from scale factor \a s */
123
+ inline UniformScaling<double> Scaling(double s) { return UniformScaling<double>(s); }
124
+ /** Constructs a uniform scaling from scale factor \a s */
125
+ template<typename RealScalar>
126
+ inline UniformScaling<std::complex<RealScalar> > Scaling(const std::complex<RealScalar>& s)
127
+ { return UniformScaling<std::complex<RealScalar> >(s); }
128
+
129
+ /** Constructs a 2D axis aligned scaling */
130
+ template<typename Scalar>
131
+ inline DiagonalMatrix<Scalar,2> Scaling(const Scalar& sx, const Scalar& sy)
132
+ { return DiagonalMatrix<Scalar,2>(sx, sy); }
133
+ /** Constructs a 3D axis aligned scaling */
134
+ template<typename Scalar>
135
+ inline DiagonalMatrix<Scalar,3> Scaling(const Scalar& sx, const Scalar& sy, const Scalar& sz)
136
+ { return DiagonalMatrix<Scalar,3>(sx, sy, sz); }
137
+
138
+ /** Constructs an axis aligned scaling expression from vector expression \a coeffs
139
+ * This is an alias for coeffs.asDiagonal()
140
+ */
141
+ template<typename Derived>
142
+ inline const DiagonalWrapper<const Derived> Scaling(const MatrixBase<Derived>& coeffs)
143
+ { return coeffs.asDiagonal(); }
144
+
145
+ /** \deprecated */
146
+ typedef DiagonalMatrix<float, 2> AlignedScaling2f;
147
+ /** \deprecated */
148
+ typedef DiagonalMatrix<double,2> AlignedScaling2d;
149
+ /** \deprecated */
150
+ typedef DiagonalMatrix<float, 3> AlignedScaling3f;
151
+ /** \deprecated */
152
+ typedef DiagonalMatrix<double,3> AlignedScaling3d;
153
+ //@}
154
+
155
+ template<typename Scalar>
156
+ template<int Dim>
157
+ inline Transform<Scalar,Dim,Affine>
158
+ UniformScaling<Scalar>::operator* (const Translation<Scalar,Dim>& t) const
159
+ {
160
+ Transform<Scalar,Dim,Affine> res;
161
+ res.matrix().setZero();
162
+ res.linear().diagonal().fill(factor());
163
+ res.translation() = factor() * t.vector();
164
+ res(Dim,Dim) = Scalar(1);
165
+ return res;
166
+ }
167
+
168
+ } // end namespace Eigen
169
+
170
+ #endif // EIGEN_SCALING_H