umappp 0.1.2
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- checksums.yaml +7 -0
- data/LICENSE.txt +25 -0
- data/README.md +110 -0
- data/ext/umappp/extconf.rb +25 -0
- data/ext/umappp/numo.hpp +867 -0
- data/ext/umappp/umappp.cpp +225 -0
- data/lib/umappp/version.rb +5 -0
- data/lib/umappp.rb +41 -0
- data/vendor/Eigen/Cholesky +45 -0
- data/vendor/Eigen/CholmodSupport +48 -0
- data/vendor/Eigen/Core +384 -0
- data/vendor/Eigen/Dense +7 -0
- data/vendor/Eigen/Eigen +2 -0
- data/vendor/Eigen/Eigenvalues +60 -0
- data/vendor/Eigen/Geometry +59 -0
- data/vendor/Eigen/Householder +29 -0
- data/vendor/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/Eigen/Jacobi +32 -0
- data/vendor/Eigen/KLUSupport +41 -0
- data/vendor/Eigen/LU +47 -0
- data/vendor/Eigen/MetisSupport +35 -0
- data/vendor/Eigen/OrderingMethods +70 -0
- data/vendor/Eigen/PaStiXSupport +49 -0
- data/vendor/Eigen/PardisoSupport +35 -0
- data/vendor/Eigen/QR +50 -0
- data/vendor/Eigen/QtAlignedMalloc +39 -0
- data/vendor/Eigen/SPQRSupport +34 -0
- data/vendor/Eigen/SVD +50 -0
- data/vendor/Eigen/Sparse +34 -0
- data/vendor/Eigen/SparseCholesky +37 -0
- data/vendor/Eigen/SparseCore +69 -0
- data/vendor/Eigen/SparseLU +50 -0
- data/vendor/Eigen/SparseQR +36 -0
- data/vendor/Eigen/StdDeque +27 -0
- data/vendor/Eigen/StdList +26 -0
- data/vendor/Eigen/StdVector +27 -0
- data/vendor/Eigen/SuperLUSupport +64 -0
- data/vendor/Eigen/UmfPackSupport +40 -0
- data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
- data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
- data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
- data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/Eigen/src/Core/Array.h +417 -0
- data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/Eigen/src/Core/Assign.h +90 -0
- data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
- data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/Eigen/src/Core/Block.h +448 -0
- data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
- data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
- data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
- data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
- data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
- data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
- data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
- data/vendor/Eigen/src/Core/DenseBase.h +701 -0
- data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
- data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
- data/vendor/Eigen/src/Core/Diagonal.h +258 -0
- data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
- data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/Eigen/src/Core/Dot.h +318 -0
- data/vendor/Eigen/src/Core/EigenBase.h +160 -0
- data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
- data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
- data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
- data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
- data/vendor/Eigen/src/Core/IO.h +258 -0
- data/vendor/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/Eigen/src/Core/Inverse.h +117 -0
- data/vendor/Eigen/src/Core/Map.h +171 -0
- data/vendor/Eigen/src/Core/MapBase.h +310 -0
- data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
- data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
- data/vendor/Eigen/src/Core/Matrix.h +565 -0
- data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
- data/vendor/Eigen/src/Core/NestByValue.h +85 -0
- data/vendor/Eigen/src/Core/NoAlias.h +109 -0
- data/vendor/Eigen/src/Core/NumTraits.h +335 -0
- data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
- data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
- data/vendor/Eigen/src/Core/Product.h +191 -0
- data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
- data/vendor/Eigen/src/Core/Random.h +218 -0
- data/vendor/Eigen/src/Core/Redux.h +515 -0
- data/vendor/Eigen/src/Core/Ref.h +381 -0
- data/vendor/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
- data/vendor/Eigen/src/Core/Reverse.h +217 -0
- data/vendor/Eigen/src/Core/Select.h +164 -0
- data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
- data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/Eigen/src/Core/Solve.h +188 -0
- data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/Eigen/src/Core/SolverBase.h +168 -0
- data/vendor/Eigen/src/Core/StableNorm.h +251 -0
- data/vendor/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/Eigen/src/Core/Stride.h +116 -0
- data/vendor/Eigen/src/Core/Swap.h +68 -0
- data/vendor/Eigen/src/Core/Transpose.h +464 -0
- data/vendor/Eigen/src/Core/Transpositions.h +386 -0
- data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
- data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
- data/vendor/Eigen/src/Core/Visitor.h +381 -0
- data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
- data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
- data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
- data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
- data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
- data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
- data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
- data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
- data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
- data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
- data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
- data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
- data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
- data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
- data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
- data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
- data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
- data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
- data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
- data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
- data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
- data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
- data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
- data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
- data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
- data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
- data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/Eigen/src/Core/util/Constants.h +563 -0
- data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
- data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
- data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
- data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
- data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
- data/vendor/Eigen/src/Core/util/Meta.h +812 -0
- data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
- data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
- data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
- data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
- data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
- data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
- data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
- data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
- data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
- data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
- data/vendor/Eigen/src/Geometry/Translation.h +202 -0
- data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
- data/vendor/Eigen/src/Householder/Householder.h +176 -0
- data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
- data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
- data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/Eigen/src/LU/Determinant.h +117 -0
- data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
- data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
- data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
- data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
- data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
- data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
- data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
- data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
- data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
- data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
- data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
- data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
- data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
- data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
- data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
- data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
- data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
- data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
- data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
- data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
- data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
- data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
- data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
- data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
- data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
- data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
- data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
- data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
- data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
- data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
- data/vendor/Eigen/src/misc/Image.h +82 -0
- data/vendor/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/Eigen/src/misc/blas.h +440 -0
- data/vendor/Eigen/src/misc/lapack.h +152 -0
- data/vendor/Eigen/src/misc/lapacke.h +16292 -0
- data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
- data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
- data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
- data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
- data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/aarand/aarand.hpp +114 -0
- data/vendor/annoy/annoylib.h +1495 -0
- data/vendor/annoy/kissrandom.h +120 -0
- data/vendor/annoy/mman.h +242 -0
- data/vendor/hnswlib/bruteforce.h +152 -0
- data/vendor/hnswlib/hnswalg.h +1192 -0
- data/vendor/hnswlib/hnswlib.h +108 -0
- data/vendor/hnswlib/space_ip.h +282 -0
- data/vendor/hnswlib/space_l2.h +281 -0
- data/vendor/hnswlib/visited_list_pool.h +79 -0
- data/vendor/irlba/irlba.hpp +575 -0
- data/vendor/irlba/lanczos.hpp +212 -0
- data/vendor/irlba/parallel.hpp +474 -0
- data/vendor/irlba/utils.hpp +224 -0
- data/vendor/irlba/wrappers.hpp +228 -0
- data/vendor/kmeans/Base.hpp +75 -0
- data/vendor/kmeans/Details.hpp +79 -0
- data/vendor/kmeans/HartiganWong.hpp +492 -0
- data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
- data/vendor/kmeans/InitializeNone.hpp +44 -0
- data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
- data/vendor/kmeans/InitializeRandom.hpp +91 -0
- data/vendor/kmeans/Kmeans.hpp +161 -0
- data/vendor/kmeans/Lloyd.hpp +134 -0
- data/vendor/kmeans/MiniBatch.hpp +269 -0
- data/vendor/kmeans/QuickSearch.hpp +179 -0
- data/vendor/kmeans/compute_centroids.hpp +32 -0
- data/vendor/kmeans/compute_wcss.hpp +27 -0
- data/vendor/kmeans/is_edge_case.hpp +42 -0
- data/vendor/kmeans/random.hpp +55 -0
- data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
- data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
- data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
- data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
- data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
- data/vendor/knncolle/knncolle.hpp +34 -0
- data/vendor/knncolle/utils/Base.hpp +100 -0
- data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
- data/vendor/knncolle/utils/distances.hpp +98 -0
- data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
- data/vendor/powerit/PowerIterations.hpp +157 -0
- data/vendor/umappp/NeighborList.hpp +37 -0
- data/vendor/umappp/Umap.hpp +662 -0
- data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
- data/vendor/umappp/find_ab.hpp +157 -0
- data/vendor/umappp/neighbor_similarities.hpp +136 -0
- data/vendor/umappp/optimize_layout.hpp +285 -0
- data/vendor/umappp/spectral_init.hpp +181 -0
- data/vendor/umappp/umappp.hpp +13 -0
- metadata +465 -0
@@ -0,0 +1,517 @@
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_GENERAL_MATRIX_MATRIX_H
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#define EIGEN_GENERAL_MATRIX_MATRIX_H
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namespace Eigen {
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namespace internal {
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template<typename _LhsScalar, typename _RhsScalar> class level3_blocking;
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/* Specialization for a row-major destination matrix => simple transposition of the product */
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template<
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typename Index,
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typename LhsScalar, int LhsStorageOrder, bool ConjugateLhs,
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typename RhsScalar, int RhsStorageOrder, bool ConjugateRhs,
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int ResInnerStride>
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struct general_matrix_matrix_product<Index,LhsScalar,LhsStorageOrder,ConjugateLhs,RhsScalar,RhsStorageOrder,ConjugateRhs,RowMajor,ResInnerStride>
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{
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typedef gebp_traits<RhsScalar,LhsScalar> Traits;
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typedef typename ScalarBinaryOpTraits<LhsScalar, RhsScalar>::ReturnType ResScalar;
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static EIGEN_STRONG_INLINE void run(
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Index rows, Index cols, Index depth,
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const LhsScalar* lhs, Index lhsStride,
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const RhsScalar* rhs, Index rhsStride,
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ResScalar* res, Index resIncr, Index resStride,
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ResScalar alpha,
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level3_blocking<RhsScalar,LhsScalar>& blocking,
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GemmParallelInfo<Index>* info = 0)
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{
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// transpose the product such that the result is column major
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general_matrix_matrix_product<Index,
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RhsScalar, RhsStorageOrder==RowMajor ? ColMajor : RowMajor, ConjugateRhs,
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LhsScalar, LhsStorageOrder==RowMajor ? ColMajor : RowMajor, ConjugateLhs,
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ColMajor,ResInnerStride>
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::run(cols,rows,depth,rhs,rhsStride,lhs,lhsStride,res,resIncr,resStride,alpha,blocking,info);
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}
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};
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/* Specialization for a col-major destination matrix
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* => Blocking algorithm following Goto's paper */
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template<
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typename Index,
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typename LhsScalar, int LhsStorageOrder, bool ConjugateLhs,
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typename RhsScalar, int RhsStorageOrder, bool ConjugateRhs,
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int ResInnerStride>
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struct general_matrix_matrix_product<Index,LhsScalar,LhsStorageOrder,ConjugateLhs,RhsScalar,RhsStorageOrder,ConjugateRhs,ColMajor,ResInnerStride>
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{
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typedef gebp_traits<LhsScalar,RhsScalar> Traits;
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typedef typename ScalarBinaryOpTraits<LhsScalar, RhsScalar>::ReturnType ResScalar;
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static void run(Index rows, Index cols, Index depth,
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const LhsScalar* _lhs, Index lhsStride,
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const RhsScalar* _rhs, Index rhsStride,
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ResScalar* _res, Index resIncr, Index resStride,
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ResScalar alpha,
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level3_blocking<LhsScalar,RhsScalar>& blocking,
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GemmParallelInfo<Index>* info = 0)
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{
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typedef const_blas_data_mapper<LhsScalar, Index, LhsStorageOrder> LhsMapper;
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typedef const_blas_data_mapper<RhsScalar, Index, RhsStorageOrder> RhsMapper;
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typedef blas_data_mapper<typename Traits::ResScalar, Index, ColMajor,Unaligned,ResInnerStride> ResMapper;
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LhsMapper lhs(_lhs, lhsStride);
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RhsMapper rhs(_rhs, rhsStride);
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ResMapper res(_res, resStride, resIncr);
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Index kc = blocking.kc(); // cache block size along the K direction
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Index mc = (std::min)(rows,blocking.mc()); // cache block size along the M direction
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Index nc = (std::min)(cols,blocking.nc()); // cache block size along the N direction
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gemm_pack_lhs<LhsScalar, Index, LhsMapper, Traits::mr, Traits::LhsProgress, typename Traits::LhsPacket4Packing, LhsStorageOrder> pack_lhs;
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gemm_pack_rhs<RhsScalar, Index, RhsMapper, Traits::nr, RhsStorageOrder> pack_rhs;
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gebp_kernel<LhsScalar, RhsScalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp;
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#ifdef EIGEN_HAS_OPENMP
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if(info)
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{
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// this is the parallel version!
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int tid = omp_get_thread_num();
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int threads = omp_get_num_threads();
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LhsScalar* blockA = blocking.blockA();
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eigen_internal_assert(blockA!=0);
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std::size_t sizeB = kc*nc;
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ei_declare_aligned_stack_constructed_variable(RhsScalar, blockB, sizeB, 0);
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// For each horizontal panel of the rhs, and corresponding vertical panel of the lhs...
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for(Index k=0; k<depth; k+=kc)
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{
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const Index actual_kc = (std::min)(k+kc,depth)-k; // => rows of B', and cols of the A'
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// In order to reduce the chance that a thread has to wait for the other,
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// let's start by packing B'.
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pack_rhs(blockB, rhs.getSubMapper(k,0), actual_kc, nc);
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// Pack A_k to A' in a parallel fashion:
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// each thread packs the sub block A_k,i to A'_i where i is the thread id.
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// However, before copying to A'_i, we have to make sure that no other thread is still using it,
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// i.e., we test that info[tid].users equals 0.
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// Then, we set info[tid].users to the number of threads to mark that all other threads are going to use it.
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while(info[tid].users!=0) {}
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info[tid].users = threads;
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pack_lhs(blockA+info[tid].lhs_start*actual_kc, lhs.getSubMapper(info[tid].lhs_start,k), actual_kc, info[tid].lhs_length);
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// Notify the other threads that the part A'_i is ready to go.
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info[tid].sync = k;
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// Computes C_i += A' * B' per A'_i
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for(int shift=0; shift<threads; ++shift)
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{
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int i = (tid+shift)%threads;
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// At this point we have to make sure that A'_i has been updated by the thread i,
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// we use testAndSetOrdered to mimic a volatile access.
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// However, no need to wait for the B' part which has been updated by the current thread!
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if (shift>0) {
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while(info[i].sync!=k) {
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}
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}
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gebp(res.getSubMapper(info[i].lhs_start, 0), blockA+info[i].lhs_start*actual_kc, blockB, info[i].lhs_length, actual_kc, nc, alpha);
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}
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// Then keep going as usual with the remaining B'
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for(Index j=nc; j<cols; j+=nc)
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{
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const Index actual_nc = (std::min)(j+nc,cols)-j;
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// pack B_k,j to B'
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pack_rhs(blockB, rhs.getSubMapper(k,j), actual_kc, actual_nc);
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// C_j += A' * B'
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gebp(res.getSubMapper(0, j), blockA, blockB, rows, actual_kc, actual_nc, alpha);
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}
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// Release all the sub blocks A'_i of A' for the current thread,
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// i.e., we simply decrement the number of users by 1
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for(Index i=0; i<threads; ++i)
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#if !EIGEN_HAS_CXX11_ATOMIC
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#pragma omp atomic
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#endif
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info[i].users -= 1;
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}
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}
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else
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#endif // EIGEN_HAS_OPENMP
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{
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EIGEN_UNUSED_VARIABLE(info);
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// this is the sequential version!
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std::size_t sizeA = kc*mc;
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std::size_t sizeB = kc*nc;
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ei_declare_aligned_stack_constructed_variable(LhsScalar, blockA, sizeA, blocking.blockA());
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ei_declare_aligned_stack_constructed_variable(RhsScalar, blockB, sizeB, blocking.blockB());
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const bool pack_rhs_once = mc!=rows && kc==depth && nc==cols;
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// For each horizontal panel of the rhs, and corresponding panel of the lhs...
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for(Index i2=0; i2<rows; i2+=mc)
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{
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const Index actual_mc = (std::min)(i2+mc,rows)-i2;
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for(Index k2=0; k2<depth; k2+=kc)
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{
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const Index actual_kc = (std::min)(k2+kc,depth)-k2;
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// OK, here we have selected one horizontal panel of rhs and one vertical panel of lhs.
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// => Pack lhs's panel into a sequential chunk of memory (L2/L3 caching)
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// Note that this panel will be read as many times as the number of blocks in the rhs's
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// horizontal panel which is, in practice, a very low number.
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pack_lhs(blockA, lhs.getSubMapper(i2,k2), actual_kc, actual_mc);
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// For each kc x nc block of the rhs's horizontal panel...
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for(Index j2=0; j2<cols; j2+=nc)
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{
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const Index actual_nc = (std::min)(j2+nc,cols)-j2;
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// We pack the rhs's block into a sequential chunk of memory (L2 caching)
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// Note that this block will be read a very high number of times, which is equal to the number of
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// micro horizontal panel of the large rhs's panel (e.g., rows/12 times).
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if((!pack_rhs_once) || i2==0)
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pack_rhs(blockB, rhs.getSubMapper(k2,j2), actual_kc, actual_nc);
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// Everything is packed, we can now call the panel * block kernel:
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gebp(res.getSubMapper(i2, j2), blockA, blockB, actual_mc, actual_kc, actual_nc, alpha);
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}
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}
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}
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}
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}
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};
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/*********************************************************************************
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* Specialization of generic_product_impl for "large" GEMM, i.e.,
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* implementation of the high level wrapper to general_matrix_matrix_product
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**********************************************************************************/
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template<typename Scalar, typename Index, typename Gemm, typename Lhs, typename Rhs, typename Dest, typename BlockingType>
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struct gemm_functor
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{
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gemm_functor(const Lhs& lhs, const Rhs& rhs, Dest& dest, const Scalar& actualAlpha, BlockingType& blocking)
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: m_lhs(lhs), m_rhs(rhs), m_dest(dest), m_actualAlpha(actualAlpha), m_blocking(blocking)
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{}
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void initParallelSession(Index num_threads) const
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{
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m_blocking.initParallel(m_lhs.rows(), m_rhs.cols(), m_lhs.cols(), num_threads);
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m_blocking.allocateA();
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}
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void operator() (Index row, Index rows, Index col=0, Index cols=-1, GemmParallelInfo<Index>* info=0) const
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{
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if(cols==-1)
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cols = m_rhs.cols();
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Gemm::run(rows, cols, m_lhs.cols(),
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&m_lhs.coeffRef(row,0), m_lhs.outerStride(),
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&m_rhs.coeffRef(0,col), m_rhs.outerStride(),
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(Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(),
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m_actualAlpha, m_blocking, info);
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}
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typedef typename Gemm::Traits Traits;
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protected:
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const Lhs& m_lhs;
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const Rhs& m_rhs;
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Dest& m_dest;
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Scalar m_actualAlpha;
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BlockingType& m_blocking;
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};
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template<int StorageOrder, typename LhsScalar, typename RhsScalar, int MaxRows, int MaxCols, int MaxDepth, int KcFactor=1,
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bool FiniteAtCompileTime = MaxRows!=Dynamic && MaxCols!=Dynamic && MaxDepth != Dynamic> class gemm_blocking_space;
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template<typename _LhsScalar, typename _RhsScalar>
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class level3_blocking
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{
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typedef _LhsScalar LhsScalar;
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typedef _RhsScalar RhsScalar;
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protected:
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LhsScalar* m_blockA;
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RhsScalar* m_blockB;
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Index m_mc;
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Index m_nc;
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Index m_kc;
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public:
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level3_blocking()
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: m_blockA(0), m_blockB(0), m_mc(0), m_nc(0), m_kc(0)
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{}
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+
inline Index mc() const { return m_mc; }
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inline Index nc() const { return m_nc; }
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+
inline Index kc() const { return m_kc; }
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273
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+
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274
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+
inline LhsScalar* blockA() { return m_blockA; }
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+
inline RhsScalar* blockB() { return m_blockB; }
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+
};
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+
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+
template<int StorageOrder, typename _LhsScalar, typename _RhsScalar, int MaxRows, int MaxCols, int MaxDepth, int KcFactor>
|
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+
class gemm_blocking_space<StorageOrder,_LhsScalar,_RhsScalar,MaxRows, MaxCols, MaxDepth, KcFactor, true /* == FiniteAtCompileTime */>
|
280
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+
: public level3_blocking<
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281
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+
typename conditional<StorageOrder==RowMajor,_RhsScalar,_LhsScalar>::type,
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+
typename conditional<StorageOrder==RowMajor,_LhsScalar,_RhsScalar>::type>
|
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+
{
|
284
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+
enum {
|
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+
Transpose = StorageOrder==RowMajor,
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+
ActualRows = Transpose ? MaxCols : MaxRows,
|
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+
ActualCols = Transpose ? MaxRows : MaxCols
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+
};
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+
typedef typename conditional<Transpose,_RhsScalar,_LhsScalar>::type LhsScalar;
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+
typedef typename conditional<Transpose,_LhsScalar,_RhsScalar>::type RhsScalar;
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291
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+
typedef gebp_traits<LhsScalar,RhsScalar> Traits;
|
292
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+
enum {
|
293
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+
SizeA = ActualRows * MaxDepth,
|
294
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+
SizeB = ActualCols * MaxDepth
|
295
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+
};
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296
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+
|
297
|
+
#if EIGEN_MAX_STATIC_ALIGN_BYTES >= EIGEN_DEFAULT_ALIGN_BYTES
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298
|
+
EIGEN_ALIGN_MAX LhsScalar m_staticA[SizeA];
|
299
|
+
EIGEN_ALIGN_MAX RhsScalar m_staticB[SizeB];
|
300
|
+
#else
|
301
|
+
EIGEN_ALIGN_MAX char m_staticA[SizeA * sizeof(LhsScalar) + EIGEN_DEFAULT_ALIGN_BYTES-1];
|
302
|
+
EIGEN_ALIGN_MAX char m_staticB[SizeB * sizeof(RhsScalar) + EIGEN_DEFAULT_ALIGN_BYTES-1];
|
303
|
+
#endif
|
304
|
+
|
305
|
+
public:
|
306
|
+
|
307
|
+
gemm_blocking_space(Index /*rows*/, Index /*cols*/, Index /*depth*/, Index /*num_threads*/, bool /*full_rows = false*/)
|
308
|
+
{
|
309
|
+
this->m_mc = ActualRows;
|
310
|
+
this->m_nc = ActualCols;
|
311
|
+
this->m_kc = MaxDepth;
|
312
|
+
#if EIGEN_MAX_STATIC_ALIGN_BYTES >= EIGEN_DEFAULT_ALIGN_BYTES
|
313
|
+
this->m_blockA = m_staticA;
|
314
|
+
this->m_blockB = m_staticB;
|
315
|
+
#else
|
316
|
+
this->m_blockA = reinterpret_cast<LhsScalar*>((internal::UIntPtr(m_staticA) + (EIGEN_DEFAULT_ALIGN_BYTES-1)) & ~std::size_t(EIGEN_DEFAULT_ALIGN_BYTES-1));
|
317
|
+
this->m_blockB = reinterpret_cast<RhsScalar*>((internal::UIntPtr(m_staticB) + (EIGEN_DEFAULT_ALIGN_BYTES-1)) & ~std::size_t(EIGEN_DEFAULT_ALIGN_BYTES-1));
|
318
|
+
#endif
|
319
|
+
}
|
320
|
+
|
321
|
+
void initParallel(Index, Index, Index, Index)
|
322
|
+
{}
|
323
|
+
|
324
|
+
inline void allocateA() {}
|
325
|
+
inline void allocateB() {}
|
326
|
+
inline void allocateAll() {}
|
327
|
+
};
|
328
|
+
|
329
|
+
template<int StorageOrder, typename _LhsScalar, typename _RhsScalar, int MaxRows, int MaxCols, int MaxDepth, int KcFactor>
|
330
|
+
class gemm_blocking_space<StorageOrder,_LhsScalar,_RhsScalar,MaxRows, MaxCols, MaxDepth, KcFactor, false>
|
331
|
+
: public level3_blocking<
|
332
|
+
typename conditional<StorageOrder==RowMajor,_RhsScalar,_LhsScalar>::type,
|
333
|
+
typename conditional<StorageOrder==RowMajor,_LhsScalar,_RhsScalar>::type>
|
334
|
+
{
|
335
|
+
enum {
|
336
|
+
Transpose = StorageOrder==RowMajor
|
337
|
+
};
|
338
|
+
typedef typename conditional<Transpose,_RhsScalar,_LhsScalar>::type LhsScalar;
|
339
|
+
typedef typename conditional<Transpose,_LhsScalar,_RhsScalar>::type RhsScalar;
|
340
|
+
typedef gebp_traits<LhsScalar,RhsScalar> Traits;
|
341
|
+
|
342
|
+
Index m_sizeA;
|
343
|
+
Index m_sizeB;
|
344
|
+
|
345
|
+
public:
|
346
|
+
|
347
|
+
gemm_blocking_space(Index rows, Index cols, Index depth, Index num_threads, bool l3_blocking)
|
348
|
+
{
|
349
|
+
this->m_mc = Transpose ? cols : rows;
|
350
|
+
this->m_nc = Transpose ? rows : cols;
|
351
|
+
this->m_kc = depth;
|
352
|
+
|
353
|
+
if(l3_blocking)
|
354
|
+
{
|
355
|
+
computeProductBlockingSizes<LhsScalar,RhsScalar,KcFactor>(this->m_kc, this->m_mc, this->m_nc, num_threads);
|
356
|
+
}
|
357
|
+
else // no l3 blocking
|
358
|
+
{
|
359
|
+
Index n = this->m_nc;
|
360
|
+
computeProductBlockingSizes<LhsScalar,RhsScalar,KcFactor>(this->m_kc, this->m_mc, n, num_threads);
|
361
|
+
}
|
362
|
+
|
363
|
+
m_sizeA = this->m_mc * this->m_kc;
|
364
|
+
m_sizeB = this->m_kc * this->m_nc;
|
365
|
+
}
|
366
|
+
|
367
|
+
void initParallel(Index rows, Index cols, Index depth, Index num_threads)
|
368
|
+
{
|
369
|
+
this->m_mc = Transpose ? cols : rows;
|
370
|
+
this->m_nc = Transpose ? rows : cols;
|
371
|
+
this->m_kc = depth;
|
372
|
+
|
373
|
+
eigen_internal_assert(this->m_blockA==0 && this->m_blockB==0);
|
374
|
+
Index m = this->m_mc;
|
375
|
+
computeProductBlockingSizes<LhsScalar,RhsScalar,KcFactor>(this->m_kc, m, this->m_nc, num_threads);
|
376
|
+
m_sizeA = this->m_mc * this->m_kc;
|
377
|
+
m_sizeB = this->m_kc * this->m_nc;
|
378
|
+
}
|
379
|
+
|
380
|
+
void allocateA()
|
381
|
+
{
|
382
|
+
if(this->m_blockA==0)
|
383
|
+
this->m_blockA = aligned_new<LhsScalar>(m_sizeA);
|
384
|
+
}
|
385
|
+
|
386
|
+
void allocateB()
|
387
|
+
{
|
388
|
+
if(this->m_blockB==0)
|
389
|
+
this->m_blockB = aligned_new<RhsScalar>(m_sizeB);
|
390
|
+
}
|
391
|
+
|
392
|
+
void allocateAll()
|
393
|
+
{
|
394
|
+
allocateA();
|
395
|
+
allocateB();
|
396
|
+
}
|
397
|
+
|
398
|
+
~gemm_blocking_space()
|
399
|
+
{
|
400
|
+
aligned_delete(this->m_blockA, m_sizeA);
|
401
|
+
aligned_delete(this->m_blockB, m_sizeB);
|
402
|
+
}
|
403
|
+
};
|
404
|
+
|
405
|
+
} // end namespace internal
|
406
|
+
|
407
|
+
namespace internal {
|
408
|
+
|
409
|
+
template<typename Lhs, typename Rhs>
|
410
|
+
struct generic_product_impl<Lhs,Rhs,DenseShape,DenseShape,GemmProduct>
|
411
|
+
: generic_product_impl_base<Lhs,Rhs,generic_product_impl<Lhs,Rhs,DenseShape,DenseShape,GemmProduct> >
|
412
|
+
{
|
413
|
+
typedef typename Product<Lhs,Rhs>::Scalar Scalar;
|
414
|
+
typedef typename Lhs::Scalar LhsScalar;
|
415
|
+
typedef typename Rhs::Scalar RhsScalar;
|
416
|
+
|
417
|
+
typedef internal::blas_traits<Lhs> LhsBlasTraits;
|
418
|
+
typedef typename LhsBlasTraits::DirectLinearAccessType ActualLhsType;
|
419
|
+
typedef typename internal::remove_all<ActualLhsType>::type ActualLhsTypeCleaned;
|
420
|
+
|
421
|
+
typedef internal::blas_traits<Rhs> RhsBlasTraits;
|
422
|
+
typedef typename RhsBlasTraits::DirectLinearAccessType ActualRhsType;
|
423
|
+
typedef typename internal::remove_all<ActualRhsType>::type ActualRhsTypeCleaned;
|
424
|
+
|
425
|
+
enum {
|
426
|
+
MaxDepthAtCompileTime = EIGEN_SIZE_MIN_PREFER_FIXED(Lhs::MaxColsAtCompileTime,Rhs::MaxRowsAtCompileTime)
|
427
|
+
};
|
428
|
+
|
429
|
+
typedef generic_product_impl<Lhs,Rhs,DenseShape,DenseShape,CoeffBasedProductMode> lazyproduct;
|
430
|
+
|
431
|
+
template<typename Dst>
|
432
|
+
static void evalTo(Dst& dst, const Lhs& lhs, const Rhs& rhs)
|
433
|
+
{
|
434
|
+
// See http://eigen.tuxfamily.org/bz/show_bug.cgi?id=404 for a discussion and helper program
|
435
|
+
// to determine the following heuristic.
|
436
|
+
// EIGEN_GEMM_TO_COEFFBASED_THRESHOLD is typically defined to 20 in GeneralProduct.h,
|
437
|
+
// unless it has been specialized by the user or for a given architecture.
|
438
|
+
// Note that the condition rhs.rows()>0 was required because lazy product is (was?) not happy with empty inputs.
|
439
|
+
// I'm not sure it is still required.
|
440
|
+
if((rhs.rows()+dst.rows()+dst.cols())<EIGEN_GEMM_TO_COEFFBASED_THRESHOLD && rhs.rows()>0)
|
441
|
+
lazyproduct::eval_dynamic(dst, lhs, rhs, internal::assign_op<typename Dst::Scalar,Scalar>());
|
442
|
+
else
|
443
|
+
{
|
444
|
+
dst.setZero();
|
445
|
+
scaleAndAddTo(dst, lhs, rhs, Scalar(1));
|
446
|
+
}
|
447
|
+
}
|
448
|
+
|
449
|
+
template<typename Dst>
|
450
|
+
static void addTo(Dst& dst, const Lhs& lhs, const Rhs& rhs)
|
451
|
+
{
|
452
|
+
if((rhs.rows()+dst.rows()+dst.cols())<EIGEN_GEMM_TO_COEFFBASED_THRESHOLD && rhs.rows()>0)
|
453
|
+
lazyproduct::eval_dynamic(dst, lhs, rhs, internal::add_assign_op<typename Dst::Scalar,Scalar>());
|
454
|
+
else
|
455
|
+
scaleAndAddTo(dst,lhs, rhs, Scalar(1));
|
456
|
+
}
|
457
|
+
|
458
|
+
template<typename Dst>
|
459
|
+
static void subTo(Dst& dst, const Lhs& lhs, const Rhs& rhs)
|
460
|
+
{
|
461
|
+
if((rhs.rows()+dst.rows()+dst.cols())<EIGEN_GEMM_TO_COEFFBASED_THRESHOLD && rhs.rows()>0)
|
462
|
+
lazyproduct::eval_dynamic(dst, lhs, rhs, internal::sub_assign_op<typename Dst::Scalar,Scalar>());
|
463
|
+
else
|
464
|
+
scaleAndAddTo(dst, lhs, rhs, Scalar(-1));
|
465
|
+
}
|
466
|
+
|
467
|
+
template<typename Dest>
|
468
|
+
static void scaleAndAddTo(Dest& dst, const Lhs& a_lhs, const Rhs& a_rhs, const Scalar& alpha)
|
469
|
+
{
|
470
|
+
eigen_assert(dst.rows()==a_lhs.rows() && dst.cols()==a_rhs.cols());
|
471
|
+
if(a_lhs.cols()==0 || a_lhs.rows()==0 || a_rhs.cols()==0)
|
472
|
+
return;
|
473
|
+
|
474
|
+
if (dst.cols() == 1)
|
475
|
+
{
|
476
|
+
// Fallback to GEMV if either the lhs or rhs is a runtime vector
|
477
|
+
typename Dest::ColXpr dst_vec(dst.col(0));
|
478
|
+
return internal::generic_product_impl<Lhs,typename Rhs::ConstColXpr,DenseShape,DenseShape,GemvProduct>
|
479
|
+
::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha);
|
480
|
+
}
|
481
|
+
else if (dst.rows() == 1)
|
482
|
+
{
|
483
|
+
// Fallback to GEMV if either the lhs or rhs is a runtime vector
|
484
|
+
typename Dest::RowXpr dst_vec(dst.row(0));
|
485
|
+
return internal::generic_product_impl<typename Lhs::ConstRowXpr,Rhs,DenseShape,DenseShape,GemvProduct>
|
486
|
+
::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha);
|
487
|
+
}
|
488
|
+
|
489
|
+
typename internal::add_const_on_value_type<ActualLhsType>::type lhs = LhsBlasTraits::extract(a_lhs);
|
490
|
+
typename internal::add_const_on_value_type<ActualRhsType>::type rhs = RhsBlasTraits::extract(a_rhs);
|
491
|
+
|
492
|
+
Scalar actualAlpha = combine_scalar_factors(alpha, a_lhs, a_rhs);
|
493
|
+
|
494
|
+
typedef internal::gemm_blocking_space<(Dest::Flags&RowMajorBit) ? RowMajor : ColMajor,LhsScalar,RhsScalar,
|
495
|
+
Dest::MaxRowsAtCompileTime,Dest::MaxColsAtCompileTime,MaxDepthAtCompileTime> BlockingType;
|
496
|
+
|
497
|
+
typedef internal::gemm_functor<
|
498
|
+
Scalar, Index,
|
499
|
+
internal::general_matrix_matrix_product<
|
500
|
+
Index,
|
501
|
+
LhsScalar, (ActualLhsTypeCleaned::Flags&RowMajorBit) ? RowMajor : ColMajor, bool(LhsBlasTraits::NeedToConjugate),
|
502
|
+
RhsScalar, (ActualRhsTypeCleaned::Flags&RowMajorBit) ? RowMajor : ColMajor, bool(RhsBlasTraits::NeedToConjugate),
|
503
|
+
(Dest::Flags&RowMajorBit) ? RowMajor : ColMajor,
|
504
|
+
Dest::InnerStrideAtCompileTime>,
|
505
|
+
ActualLhsTypeCleaned, ActualRhsTypeCleaned, Dest, BlockingType> GemmFunctor;
|
506
|
+
|
507
|
+
BlockingType blocking(dst.rows(), dst.cols(), lhs.cols(), 1, true);
|
508
|
+
internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)>
|
509
|
+
(GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit);
|
510
|
+
}
|
511
|
+
};
|
512
|
+
|
513
|
+
} // end namespace internal
|
514
|
+
|
515
|
+
} // end namespace Eigen
|
516
|
+
|
517
|
+
#endif // EIGEN_GENERAL_MATRIX_MATRIX_H
|