umappp 0.1.2
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- checksums.yaml +7 -0
- data/LICENSE.txt +25 -0
- data/README.md +110 -0
- data/ext/umappp/extconf.rb +25 -0
- data/ext/umappp/numo.hpp +867 -0
- data/ext/umappp/umappp.cpp +225 -0
- data/lib/umappp/version.rb +5 -0
- data/lib/umappp.rb +41 -0
- data/vendor/Eigen/Cholesky +45 -0
- data/vendor/Eigen/CholmodSupport +48 -0
- data/vendor/Eigen/Core +384 -0
- data/vendor/Eigen/Dense +7 -0
- data/vendor/Eigen/Eigen +2 -0
- data/vendor/Eigen/Eigenvalues +60 -0
- data/vendor/Eigen/Geometry +59 -0
- data/vendor/Eigen/Householder +29 -0
- data/vendor/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/Eigen/Jacobi +32 -0
- data/vendor/Eigen/KLUSupport +41 -0
- data/vendor/Eigen/LU +47 -0
- data/vendor/Eigen/MetisSupport +35 -0
- data/vendor/Eigen/OrderingMethods +70 -0
- data/vendor/Eigen/PaStiXSupport +49 -0
- data/vendor/Eigen/PardisoSupport +35 -0
- data/vendor/Eigen/QR +50 -0
- data/vendor/Eigen/QtAlignedMalloc +39 -0
- data/vendor/Eigen/SPQRSupport +34 -0
- data/vendor/Eigen/SVD +50 -0
- data/vendor/Eigen/Sparse +34 -0
- data/vendor/Eigen/SparseCholesky +37 -0
- data/vendor/Eigen/SparseCore +69 -0
- data/vendor/Eigen/SparseLU +50 -0
- data/vendor/Eigen/SparseQR +36 -0
- data/vendor/Eigen/StdDeque +27 -0
- data/vendor/Eigen/StdList +26 -0
- data/vendor/Eigen/StdVector +27 -0
- data/vendor/Eigen/SuperLUSupport +64 -0
- data/vendor/Eigen/UmfPackSupport +40 -0
- data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
- data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
- data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
- data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/Eigen/src/Core/Array.h +417 -0
- data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/Eigen/src/Core/Assign.h +90 -0
- data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
- data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/Eigen/src/Core/Block.h +448 -0
- data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
- data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
- data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
- data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
- data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
- data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
- data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
- data/vendor/Eigen/src/Core/DenseBase.h +701 -0
- data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
- data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
- data/vendor/Eigen/src/Core/Diagonal.h +258 -0
- data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
- data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/Eigen/src/Core/Dot.h +318 -0
- data/vendor/Eigen/src/Core/EigenBase.h +160 -0
- data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
- data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
- data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
- data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
- data/vendor/Eigen/src/Core/IO.h +258 -0
- data/vendor/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/Eigen/src/Core/Inverse.h +117 -0
- data/vendor/Eigen/src/Core/Map.h +171 -0
- data/vendor/Eigen/src/Core/MapBase.h +310 -0
- data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
- data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
- data/vendor/Eigen/src/Core/Matrix.h +565 -0
- data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
- data/vendor/Eigen/src/Core/NestByValue.h +85 -0
- data/vendor/Eigen/src/Core/NoAlias.h +109 -0
- data/vendor/Eigen/src/Core/NumTraits.h +335 -0
- data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
- data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
- data/vendor/Eigen/src/Core/Product.h +191 -0
- data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
- data/vendor/Eigen/src/Core/Random.h +218 -0
- data/vendor/Eigen/src/Core/Redux.h +515 -0
- data/vendor/Eigen/src/Core/Ref.h +381 -0
- data/vendor/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
- data/vendor/Eigen/src/Core/Reverse.h +217 -0
- data/vendor/Eigen/src/Core/Select.h +164 -0
- data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
- data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/Eigen/src/Core/Solve.h +188 -0
- data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/Eigen/src/Core/SolverBase.h +168 -0
- data/vendor/Eigen/src/Core/StableNorm.h +251 -0
- data/vendor/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/Eigen/src/Core/Stride.h +116 -0
- data/vendor/Eigen/src/Core/Swap.h +68 -0
- data/vendor/Eigen/src/Core/Transpose.h +464 -0
- data/vendor/Eigen/src/Core/Transpositions.h +386 -0
- data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
- data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
- data/vendor/Eigen/src/Core/Visitor.h +381 -0
- data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
- data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
- data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
- data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
- data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
- data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
- data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
- data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
- data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
- data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
- data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
- data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
- data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
- data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
- data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
- data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
- data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
- data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
- data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
- data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
- data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
- data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
- data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
- data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
- data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
- data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
- data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/Eigen/src/Core/util/Constants.h +563 -0
- data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
- data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
- data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
- data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
- data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
- data/vendor/Eigen/src/Core/util/Meta.h +812 -0
- data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
- data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
- data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
- data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
- data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
- data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
- data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
- data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
- data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
- data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
- data/vendor/Eigen/src/Geometry/Translation.h +202 -0
- data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
- data/vendor/Eigen/src/Householder/Householder.h +176 -0
- data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
- data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
- data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/Eigen/src/LU/Determinant.h +117 -0
- data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
- data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
- data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
- data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
- data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
- data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
- data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
- data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
- data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
- data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
- data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
- data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
- data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
- data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
- data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
- data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
- data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
- data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
- data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
- data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
- data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
- data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
- data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
- data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
- data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
- data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
- data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
- data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
- data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
- data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
- data/vendor/Eigen/src/misc/Image.h +82 -0
- data/vendor/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/Eigen/src/misc/blas.h +440 -0
- data/vendor/Eigen/src/misc/lapack.h +152 -0
- data/vendor/Eigen/src/misc/lapacke.h +16292 -0
- data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
- data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
- data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
- data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
- data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/aarand/aarand.hpp +114 -0
- data/vendor/annoy/annoylib.h +1495 -0
- data/vendor/annoy/kissrandom.h +120 -0
- data/vendor/annoy/mman.h +242 -0
- data/vendor/hnswlib/bruteforce.h +152 -0
- data/vendor/hnswlib/hnswalg.h +1192 -0
- data/vendor/hnswlib/hnswlib.h +108 -0
- data/vendor/hnswlib/space_ip.h +282 -0
- data/vendor/hnswlib/space_l2.h +281 -0
- data/vendor/hnswlib/visited_list_pool.h +79 -0
- data/vendor/irlba/irlba.hpp +575 -0
- data/vendor/irlba/lanczos.hpp +212 -0
- data/vendor/irlba/parallel.hpp +474 -0
- data/vendor/irlba/utils.hpp +224 -0
- data/vendor/irlba/wrappers.hpp +228 -0
- data/vendor/kmeans/Base.hpp +75 -0
- data/vendor/kmeans/Details.hpp +79 -0
- data/vendor/kmeans/HartiganWong.hpp +492 -0
- data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
- data/vendor/kmeans/InitializeNone.hpp +44 -0
- data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
- data/vendor/kmeans/InitializeRandom.hpp +91 -0
- data/vendor/kmeans/Kmeans.hpp +161 -0
- data/vendor/kmeans/Lloyd.hpp +134 -0
- data/vendor/kmeans/MiniBatch.hpp +269 -0
- data/vendor/kmeans/QuickSearch.hpp +179 -0
- data/vendor/kmeans/compute_centroids.hpp +32 -0
- data/vendor/kmeans/compute_wcss.hpp +27 -0
- data/vendor/kmeans/is_edge_case.hpp +42 -0
- data/vendor/kmeans/random.hpp +55 -0
- data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
- data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
- data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
- data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
- data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
- data/vendor/knncolle/knncolle.hpp +34 -0
- data/vendor/knncolle/utils/Base.hpp +100 -0
- data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
- data/vendor/knncolle/utils/distances.hpp +98 -0
- data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
- data/vendor/powerit/PowerIterations.hpp +157 -0
- data/vendor/umappp/NeighborList.hpp +37 -0
- data/vendor/umappp/Umap.hpp +662 -0
- data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
- data/vendor/umappp/find_ab.hpp +157 -0
- data/vendor/umappp/neighbor_similarities.hpp +136 -0
- data/vendor/umappp/optimize_layout.hpp +285 -0
- data/vendor/umappp/spectral_init.hpp +181 -0
- data/vendor/umappp/umappp.hpp +13 -0
- metadata +465 -0
@@ -0,0 +1,605 @@
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
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// Copyright (C) 2009-2015 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_PERMUTATIONMATRIX_H
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#define EIGEN_PERMUTATIONMATRIX_H
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namespace Eigen {
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namespace internal {
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enum PermPermProduct_t {PermPermProduct};
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} // end namespace internal
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/** \class PermutationBase
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* \ingroup Core_Module
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*
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* \brief Base class for permutations
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*
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* \tparam Derived the derived class
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*
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* This class is the base class for all expressions representing a permutation matrix,
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* internally stored as a vector of integers.
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* The convention followed here is that if \f$ \sigma \f$ is a permutation, the corresponding permutation matrix
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* \f$ P_\sigma \f$ is such that if \f$ (e_1,\ldots,e_p) \f$ is the canonical basis, we have:
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* \f[ P_\sigma(e_i) = e_{\sigma(i)}. \f]
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* This convention ensures that for any two permutations \f$ \sigma, \tau \f$, we have:
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* \f[ P_{\sigma\circ\tau} = P_\sigma P_\tau. \f]
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*
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* Permutation matrices are square and invertible.
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*
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* Notice that in addition to the member functions and operators listed here, there also are non-member
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* operator* to multiply any kind of permutation object with any kind of matrix expression (MatrixBase)
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* on either side.
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*
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* \sa class PermutationMatrix, class PermutationWrapper
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*/
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template<typename Derived>
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class PermutationBase : public EigenBase<Derived>
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{
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typedef internal::traits<Derived> Traits;
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typedef EigenBase<Derived> Base;
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public:
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#ifndef EIGEN_PARSED_BY_DOXYGEN
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typedef typename Traits::IndicesType IndicesType;
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enum {
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Flags = Traits::Flags,
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RowsAtCompileTime = Traits::RowsAtCompileTime,
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ColsAtCompileTime = Traits::ColsAtCompileTime,
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MaxRowsAtCompileTime = Traits::MaxRowsAtCompileTime,
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MaxColsAtCompileTime = Traits::MaxColsAtCompileTime
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};
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typedef typename Traits::StorageIndex StorageIndex;
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typedef Matrix<StorageIndex,RowsAtCompileTime,ColsAtCompileTime,0,MaxRowsAtCompileTime,MaxColsAtCompileTime>
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DenseMatrixType;
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typedef PermutationMatrix<IndicesType::SizeAtCompileTime,IndicesType::MaxSizeAtCompileTime,StorageIndex>
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PlainPermutationType;
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typedef PlainPermutationType PlainObject;
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using Base::derived;
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typedef Inverse<Derived> InverseReturnType;
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typedef void Scalar;
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#endif
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/** Copies the other permutation into *this */
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template<typename OtherDerived>
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Derived& operator=(const PermutationBase<OtherDerived>& other)
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{
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indices() = other.indices();
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return derived();
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}
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/** Assignment from the Transpositions \a tr */
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template<typename OtherDerived>
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Derived& operator=(const TranspositionsBase<OtherDerived>& tr)
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{
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setIdentity(tr.size());
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for(Index k=size()-1; k>=0; --k)
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applyTranspositionOnTheRight(k,tr.coeff(k));
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return derived();
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}
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/** \returns the number of rows */
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inline EIGEN_DEVICE_FUNC Index rows() const { return Index(indices().size()); }
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/** \returns the number of columns */
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inline EIGEN_DEVICE_FUNC Index cols() const { return Index(indices().size()); }
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/** \returns the size of a side of the respective square matrix, i.e., the number of indices */
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inline EIGEN_DEVICE_FUNC Index size() const { return Index(indices().size()); }
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#ifndef EIGEN_PARSED_BY_DOXYGEN
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template<typename DenseDerived>
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void evalTo(MatrixBase<DenseDerived>& other) const
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{
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other.setZero();
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for (Index i=0; i<rows(); ++i)
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other.coeffRef(indices().coeff(i),i) = typename DenseDerived::Scalar(1);
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}
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#endif
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/** \returns a Matrix object initialized from this permutation matrix. Notice that it
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* is inefficient to return this Matrix object by value. For efficiency, favor using
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* the Matrix constructor taking EigenBase objects.
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*/
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DenseMatrixType toDenseMatrix() const
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{
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return derived();
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}
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/** const version of indices(). */
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const IndicesType& indices() const { return derived().indices(); }
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/** \returns a reference to the stored array representing the permutation. */
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IndicesType& indices() { return derived().indices(); }
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/** Resizes to given size.
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*/
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inline void resize(Index newSize)
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{
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indices().resize(newSize);
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}
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/** Sets *this to be the identity permutation matrix */
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void setIdentity()
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{
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StorageIndex n = StorageIndex(size());
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for(StorageIndex i = 0; i < n; ++i)
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indices().coeffRef(i) = i;
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}
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/** Sets *this to be the identity permutation matrix of given size.
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*/
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void setIdentity(Index newSize)
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{
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resize(newSize);
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setIdentity();
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}
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/** Multiplies *this by the transposition \f$(ij)\f$ on the left.
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*
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* \returns a reference to *this.
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*
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* \warning This is much slower than applyTranspositionOnTheRight(Index,Index):
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* this has linear complexity and requires a lot of branching.
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*
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* \sa applyTranspositionOnTheRight(Index,Index)
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*/
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Derived& applyTranspositionOnTheLeft(Index i, Index j)
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{
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eigen_assert(i>=0 && j>=0 && i<size() && j<size());
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for(Index k = 0; k < size(); ++k)
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{
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if(indices().coeff(k) == i) indices().coeffRef(k) = StorageIndex(j);
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else if(indices().coeff(k) == j) indices().coeffRef(k) = StorageIndex(i);
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}
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return derived();
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}
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/** Multiplies *this by the transposition \f$(ij)\f$ on the right.
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*
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* \returns a reference to *this.
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*
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* This is a fast operation, it only consists in swapping two indices.
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*
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* \sa applyTranspositionOnTheLeft(Index,Index)
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*/
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Derived& applyTranspositionOnTheRight(Index i, Index j)
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{
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eigen_assert(i>=0 && j>=0 && i<size() && j<size());
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std::swap(indices().coeffRef(i), indices().coeffRef(j));
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return derived();
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}
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/** \returns the inverse permutation matrix.
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*
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* \note \blank \note_try_to_help_rvo
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*/
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inline InverseReturnType inverse() const
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{ return InverseReturnType(derived()); }
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/** \returns the tranpose permutation matrix.
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*
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* \note \blank \note_try_to_help_rvo
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*/
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inline InverseReturnType transpose() const
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{ return InverseReturnType(derived()); }
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/**** multiplication helpers to hopefully get RVO ****/
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#ifndef EIGEN_PARSED_BY_DOXYGEN
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protected:
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template<typename OtherDerived>
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void assignTranspose(const PermutationBase<OtherDerived>& other)
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{
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for (Index i=0; i<rows();++i) indices().coeffRef(other.indices().coeff(i)) = i;
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}
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template<typename Lhs,typename Rhs>
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void assignProduct(const Lhs& lhs, const Rhs& rhs)
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{
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eigen_assert(lhs.cols() == rhs.rows());
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for (Index i=0; i<rows();++i) indices().coeffRef(i) = lhs.indices().coeff(rhs.indices().coeff(i));
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}
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#endif
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public:
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/** \returns the product permutation matrix.
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*
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* \note \blank \note_try_to_help_rvo
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*/
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template<typename Other>
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inline PlainPermutationType operator*(const PermutationBase<Other>& other) const
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{ return PlainPermutationType(internal::PermPermProduct, derived(), other.derived()); }
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/** \returns the product of a permutation with another inverse permutation.
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*
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* \note \blank \note_try_to_help_rvo
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*/
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template<typename Other>
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inline PlainPermutationType operator*(const InverseImpl<Other,PermutationStorage>& other) const
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{ return PlainPermutationType(internal::PermPermProduct, *this, other.eval()); }
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/** \returns the product of an inverse permutation with another permutation.
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*
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* \note \blank \note_try_to_help_rvo
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*/
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template<typename Other> friend
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inline PlainPermutationType operator*(const InverseImpl<Other, PermutationStorage>& other, const PermutationBase& perm)
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{ return PlainPermutationType(internal::PermPermProduct, other.eval(), perm); }
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/** \returns the determinant of the permutation matrix, which is either 1 or -1 depending on the parity of the permutation.
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*
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* This function is O(\c n) procedure allocating a buffer of \c n booleans.
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*/
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Index determinant() const
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{
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Index res = 1;
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Index n = size();
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Matrix<bool,RowsAtCompileTime,1,0,MaxRowsAtCompileTime> mask(n);
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mask.fill(false);
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Index r = 0;
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while(r < n)
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{
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// search for the next seed
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while(r<n && mask[r]) r++;
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if(r>=n)
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break;
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// we got one, let's follow it until we are back to the seed
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Index k0 = r++;
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mask.coeffRef(k0) = true;
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for(Index k=indices().coeff(k0); k!=k0; k=indices().coeff(k))
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{
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mask.coeffRef(k) = true;
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res = -res;
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}
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}
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return res;
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}
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protected:
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};
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namespace internal {
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template<int SizeAtCompileTime, int MaxSizeAtCompileTime, typename _StorageIndex>
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struct traits<PermutationMatrix<SizeAtCompileTime, MaxSizeAtCompileTime, _StorageIndex> >
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: traits<Matrix<_StorageIndex,SizeAtCompileTime,SizeAtCompileTime,0,MaxSizeAtCompileTime,MaxSizeAtCompileTime> >
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{
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typedef PermutationStorage StorageKind;
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typedef Matrix<_StorageIndex, SizeAtCompileTime, 1, 0, MaxSizeAtCompileTime, 1> IndicesType;
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typedef _StorageIndex StorageIndex;
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typedef void Scalar;
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};
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}
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/** \class PermutationMatrix
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* \ingroup Core_Module
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*
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* \brief Permutation matrix
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*
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* \tparam SizeAtCompileTime the number of rows/cols, or Dynamic
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* \tparam MaxSizeAtCompileTime the maximum number of rows/cols, or Dynamic. This optional parameter defaults to SizeAtCompileTime. Most of the time, you should not have to specify it.
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* \tparam _StorageIndex the integer type of the indices
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*
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* This class represents a permutation matrix, internally stored as a vector of integers.
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*
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* \sa class PermutationBase, class PermutationWrapper, class DiagonalMatrix
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*/
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template<int SizeAtCompileTime, int MaxSizeAtCompileTime, typename _StorageIndex>
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class PermutationMatrix : public PermutationBase<PermutationMatrix<SizeAtCompileTime, MaxSizeAtCompileTime, _StorageIndex> >
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{
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typedef PermutationBase<PermutationMatrix> Base;
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typedef internal::traits<PermutationMatrix> Traits;
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public:
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typedef const PermutationMatrix& Nested;
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+
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+
#ifndef EIGEN_PARSED_BY_DOXYGEN
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+
typedef typename Traits::IndicesType IndicesType;
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+
typedef typename Traits::StorageIndex StorageIndex;
|
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+
#endif
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+
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310
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+
inline PermutationMatrix()
|
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+
{}
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+
|
313
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+
/** Constructs an uninitialized permutation matrix of given size.
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+
*/
|
315
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+
explicit inline PermutationMatrix(Index size) : m_indices(size)
|
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+
{
|
317
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+
eigen_internal_assert(size <= NumTraits<StorageIndex>::highest());
|
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|
+
}
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+
|
320
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+
/** Copy constructor. */
|
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+
template<typename OtherDerived>
|
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+
inline PermutationMatrix(const PermutationBase<OtherDerived>& other)
|
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+
: m_indices(other.indices()) {}
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+
|
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+
/** Generic constructor from expression of the indices. The indices
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+
* array has the meaning that the permutations sends each integer i to indices[i].
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+
*
|
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+
* \warning It is your responsibility to check that the indices array that you passes actually
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+
* describes a permutation, i.e., each value between 0 and n-1 occurs exactly once, where n is the
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+
* array's size.
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+
*/
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332
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+
template<typename Other>
|
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|
+
explicit inline PermutationMatrix(const MatrixBase<Other>& indices) : m_indices(indices)
|
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|
+
{}
|
335
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+
|
336
|
+
/** Convert the Transpositions \a tr to a permutation matrix */
|
337
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+
template<typename Other>
|
338
|
+
explicit PermutationMatrix(const TranspositionsBase<Other>& tr)
|
339
|
+
: m_indices(tr.size())
|
340
|
+
{
|
341
|
+
*this = tr;
|
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|
+
}
|
343
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+
|
344
|
+
/** Copies the other permutation into *this */
|
345
|
+
template<typename Other>
|
346
|
+
PermutationMatrix& operator=(const PermutationBase<Other>& other)
|
347
|
+
{
|
348
|
+
m_indices = other.indices();
|
349
|
+
return *this;
|
350
|
+
}
|
351
|
+
|
352
|
+
/** Assignment from the Transpositions \a tr */
|
353
|
+
template<typename Other>
|
354
|
+
PermutationMatrix& operator=(const TranspositionsBase<Other>& tr)
|
355
|
+
{
|
356
|
+
return Base::operator=(tr.derived());
|
357
|
+
}
|
358
|
+
|
359
|
+
/** const version of indices(). */
|
360
|
+
const IndicesType& indices() const { return m_indices; }
|
361
|
+
/** \returns a reference to the stored array representing the permutation. */
|
362
|
+
IndicesType& indices() { return m_indices; }
|
363
|
+
|
364
|
+
|
365
|
+
/**** multiplication helpers to hopefully get RVO ****/
|
366
|
+
|
367
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
368
|
+
template<typename Other>
|
369
|
+
PermutationMatrix(const InverseImpl<Other,PermutationStorage>& other)
|
370
|
+
: m_indices(other.derived().nestedExpression().size())
|
371
|
+
{
|
372
|
+
eigen_internal_assert(m_indices.size() <= NumTraits<StorageIndex>::highest());
|
373
|
+
StorageIndex end = StorageIndex(m_indices.size());
|
374
|
+
for (StorageIndex i=0; i<end;++i)
|
375
|
+
m_indices.coeffRef(other.derived().nestedExpression().indices().coeff(i)) = i;
|
376
|
+
}
|
377
|
+
template<typename Lhs,typename Rhs>
|
378
|
+
PermutationMatrix(internal::PermPermProduct_t, const Lhs& lhs, const Rhs& rhs)
|
379
|
+
: m_indices(lhs.indices().size())
|
380
|
+
{
|
381
|
+
Base::assignProduct(lhs,rhs);
|
382
|
+
}
|
383
|
+
#endif
|
384
|
+
|
385
|
+
protected:
|
386
|
+
|
387
|
+
IndicesType m_indices;
|
388
|
+
};
|
389
|
+
|
390
|
+
|
391
|
+
namespace internal {
|
392
|
+
template<int SizeAtCompileTime, int MaxSizeAtCompileTime, typename _StorageIndex, int _PacketAccess>
|
393
|
+
struct traits<Map<PermutationMatrix<SizeAtCompileTime, MaxSizeAtCompileTime, _StorageIndex>,_PacketAccess> >
|
394
|
+
: traits<Matrix<_StorageIndex,SizeAtCompileTime,SizeAtCompileTime,0,MaxSizeAtCompileTime,MaxSizeAtCompileTime> >
|
395
|
+
{
|
396
|
+
typedef PermutationStorage StorageKind;
|
397
|
+
typedef Map<const Matrix<_StorageIndex, SizeAtCompileTime, 1, 0, MaxSizeAtCompileTime, 1>, _PacketAccess> IndicesType;
|
398
|
+
typedef _StorageIndex StorageIndex;
|
399
|
+
typedef void Scalar;
|
400
|
+
};
|
401
|
+
}
|
402
|
+
|
403
|
+
template<int SizeAtCompileTime, int MaxSizeAtCompileTime, typename _StorageIndex, int _PacketAccess>
|
404
|
+
class Map<PermutationMatrix<SizeAtCompileTime, MaxSizeAtCompileTime, _StorageIndex>,_PacketAccess>
|
405
|
+
: public PermutationBase<Map<PermutationMatrix<SizeAtCompileTime, MaxSizeAtCompileTime, _StorageIndex>,_PacketAccess> >
|
406
|
+
{
|
407
|
+
typedef PermutationBase<Map> Base;
|
408
|
+
typedef internal::traits<Map> Traits;
|
409
|
+
public:
|
410
|
+
|
411
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
412
|
+
typedef typename Traits::IndicesType IndicesType;
|
413
|
+
typedef typename IndicesType::Scalar StorageIndex;
|
414
|
+
#endif
|
415
|
+
|
416
|
+
inline Map(const StorageIndex* indicesPtr)
|
417
|
+
: m_indices(indicesPtr)
|
418
|
+
{}
|
419
|
+
|
420
|
+
inline Map(const StorageIndex* indicesPtr, Index size)
|
421
|
+
: m_indices(indicesPtr,size)
|
422
|
+
{}
|
423
|
+
|
424
|
+
/** Copies the other permutation into *this */
|
425
|
+
template<typename Other>
|
426
|
+
Map& operator=(const PermutationBase<Other>& other)
|
427
|
+
{ return Base::operator=(other.derived()); }
|
428
|
+
|
429
|
+
/** Assignment from the Transpositions \a tr */
|
430
|
+
template<typename Other>
|
431
|
+
Map& operator=(const TranspositionsBase<Other>& tr)
|
432
|
+
{ return Base::operator=(tr.derived()); }
|
433
|
+
|
434
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
435
|
+
/** This is a special case of the templated operator=. Its purpose is to
|
436
|
+
* prevent a default operator= from hiding the templated operator=.
|
437
|
+
*/
|
438
|
+
Map& operator=(const Map& other)
|
439
|
+
{
|
440
|
+
m_indices = other.m_indices;
|
441
|
+
return *this;
|
442
|
+
}
|
443
|
+
#endif
|
444
|
+
|
445
|
+
/** const version of indices(). */
|
446
|
+
const IndicesType& indices() const { return m_indices; }
|
447
|
+
/** \returns a reference to the stored array representing the permutation. */
|
448
|
+
IndicesType& indices() { return m_indices; }
|
449
|
+
|
450
|
+
protected:
|
451
|
+
|
452
|
+
IndicesType m_indices;
|
453
|
+
};
|
454
|
+
|
455
|
+
template<typename _IndicesType> class TranspositionsWrapper;
|
456
|
+
namespace internal {
|
457
|
+
template<typename _IndicesType>
|
458
|
+
struct traits<PermutationWrapper<_IndicesType> >
|
459
|
+
{
|
460
|
+
typedef PermutationStorage StorageKind;
|
461
|
+
typedef void Scalar;
|
462
|
+
typedef typename _IndicesType::Scalar StorageIndex;
|
463
|
+
typedef _IndicesType IndicesType;
|
464
|
+
enum {
|
465
|
+
RowsAtCompileTime = _IndicesType::SizeAtCompileTime,
|
466
|
+
ColsAtCompileTime = _IndicesType::SizeAtCompileTime,
|
467
|
+
MaxRowsAtCompileTime = IndicesType::MaxSizeAtCompileTime,
|
468
|
+
MaxColsAtCompileTime = IndicesType::MaxSizeAtCompileTime,
|
469
|
+
Flags = 0
|
470
|
+
};
|
471
|
+
};
|
472
|
+
}
|
473
|
+
|
474
|
+
/** \class PermutationWrapper
|
475
|
+
* \ingroup Core_Module
|
476
|
+
*
|
477
|
+
* \brief Class to view a vector of integers as a permutation matrix
|
478
|
+
*
|
479
|
+
* \tparam _IndicesType the type of the vector of integer (can be any compatible expression)
|
480
|
+
*
|
481
|
+
* This class allows to view any vector expression of integers as a permutation matrix.
|
482
|
+
*
|
483
|
+
* \sa class PermutationBase, class PermutationMatrix
|
484
|
+
*/
|
485
|
+
template<typename _IndicesType>
|
486
|
+
class PermutationWrapper : public PermutationBase<PermutationWrapper<_IndicesType> >
|
487
|
+
{
|
488
|
+
typedef PermutationBase<PermutationWrapper> Base;
|
489
|
+
typedef internal::traits<PermutationWrapper> Traits;
|
490
|
+
public:
|
491
|
+
|
492
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
493
|
+
typedef typename Traits::IndicesType IndicesType;
|
494
|
+
#endif
|
495
|
+
|
496
|
+
inline PermutationWrapper(const IndicesType& indices)
|
497
|
+
: m_indices(indices)
|
498
|
+
{}
|
499
|
+
|
500
|
+
/** const version of indices(). */
|
501
|
+
const typename internal::remove_all<typename IndicesType::Nested>::type&
|
502
|
+
indices() const { return m_indices; }
|
503
|
+
|
504
|
+
protected:
|
505
|
+
|
506
|
+
typename IndicesType::Nested m_indices;
|
507
|
+
};
|
508
|
+
|
509
|
+
|
510
|
+
/** \returns the matrix with the permutation applied to the columns.
|
511
|
+
*/
|
512
|
+
template<typename MatrixDerived, typename PermutationDerived>
|
513
|
+
EIGEN_DEVICE_FUNC
|
514
|
+
const Product<MatrixDerived, PermutationDerived, AliasFreeProduct>
|
515
|
+
operator*(const MatrixBase<MatrixDerived> &matrix,
|
516
|
+
const PermutationBase<PermutationDerived>& permutation)
|
517
|
+
{
|
518
|
+
return Product<MatrixDerived, PermutationDerived, AliasFreeProduct>
|
519
|
+
(matrix.derived(), permutation.derived());
|
520
|
+
}
|
521
|
+
|
522
|
+
/** \returns the matrix with the permutation applied to the rows.
|
523
|
+
*/
|
524
|
+
template<typename PermutationDerived, typename MatrixDerived>
|
525
|
+
EIGEN_DEVICE_FUNC
|
526
|
+
const Product<PermutationDerived, MatrixDerived, AliasFreeProduct>
|
527
|
+
operator*(const PermutationBase<PermutationDerived> &permutation,
|
528
|
+
const MatrixBase<MatrixDerived>& matrix)
|
529
|
+
{
|
530
|
+
return Product<PermutationDerived, MatrixDerived, AliasFreeProduct>
|
531
|
+
(permutation.derived(), matrix.derived());
|
532
|
+
}
|
533
|
+
|
534
|
+
|
535
|
+
template<typename PermutationType>
|
536
|
+
class InverseImpl<PermutationType, PermutationStorage>
|
537
|
+
: public EigenBase<Inverse<PermutationType> >
|
538
|
+
{
|
539
|
+
typedef typename PermutationType::PlainPermutationType PlainPermutationType;
|
540
|
+
typedef internal::traits<PermutationType> PermTraits;
|
541
|
+
protected:
|
542
|
+
InverseImpl() {}
|
543
|
+
public:
|
544
|
+
typedef Inverse<PermutationType> InverseType;
|
545
|
+
using EigenBase<Inverse<PermutationType> >::derived;
|
546
|
+
|
547
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
548
|
+
typedef typename PermutationType::DenseMatrixType DenseMatrixType;
|
549
|
+
enum {
|
550
|
+
RowsAtCompileTime = PermTraits::RowsAtCompileTime,
|
551
|
+
ColsAtCompileTime = PermTraits::ColsAtCompileTime,
|
552
|
+
MaxRowsAtCompileTime = PermTraits::MaxRowsAtCompileTime,
|
553
|
+
MaxColsAtCompileTime = PermTraits::MaxColsAtCompileTime
|
554
|
+
};
|
555
|
+
#endif
|
556
|
+
|
557
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
558
|
+
template<typename DenseDerived>
|
559
|
+
void evalTo(MatrixBase<DenseDerived>& other) const
|
560
|
+
{
|
561
|
+
other.setZero();
|
562
|
+
for (Index i=0; i<derived().rows();++i)
|
563
|
+
other.coeffRef(i, derived().nestedExpression().indices().coeff(i)) = typename DenseDerived::Scalar(1);
|
564
|
+
}
|
565
|
+
#endif
|
566
|
+
|
567
|
+
/** \return the equivalent permutation matrix */
|
568
|
+
PlainPermutationType eval() const { return derived(); }
|
569
|
+
|
570
|
+
DenseMatrixType toDenseMatrix() const { return derived(); }
|
571
|
+
|
572
|
+
/** \returns the matrix with the inverse permutation applied to the columns.
|
573
|
+
*/
|
574
|
+
template<typename OtherDerived> friend
|
575
|
+
const Product<OtherDerived, InverseType, AliasFreeProduct>
|
576
|
+
operator*(const MatrixBase<OtherDerived>& matrix, const InverseType& trPerm)
|
577
|
+
{
|
578
|
+
return Product<OtherDerived, InverseType, AliasFreeProduct>(matrix.derived(), trPerm.derived());
|
579
|
+
}
|
580
|
+
|
581
|
+
/** \returns the matrix with the inverse permutation applied to the rows.
|
582
|
+
*/
|
583
|
+
template<typename OtherDerived>
|
584
|
+
const Product<InverseType, OtherDerived, AliasFreeProduct>
|
585
|
+
operator*(const MatrixBase<OtherDerived>& matrix) const
|
586
|
+
{
|
587
|
+
return Product<InverseType, OtherDerived, AliasFreeProduct>(derived(), matrix.derived());
|
588
|
+
}
|
589
|
+
};
|
590
|
+
|
591
|
+
template<typename Derived>
|
592
|
+
const PermutationWrapper<const Derived> MatrixBase<Derived>::asPermutation() const
|
593
|
+
{
|
594
|
+
return derived();
|
595
|
+
}
|
596
|
+
|
597
|
+
namespace internal {
|
598
|
+
|
599
|
+
template<> struct AssignmentKind<DenseShape,PermutationShape> { typedef EigenBase2EigenBase Kind; };
|
600
|
+
|
601
|
+
} // end namespace internal
|
602
|
+
|
603
|
+
} // end namespace Eigen
|
604
|
+
|
605
|
+
#endif // EIGEN_PERMUTATIONMATRIX_H
|