umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,381 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2012 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_REF_H
11
+ #define EIGEN_REF_H
12
+
13
+ namespace Eigen {
14
+
15
+ namespace internal {
16
+
17
+ template<typename _PlainObjectType, int _Options, typename _StrideType>
18
+ struct traits<Ref<_PlainObjectType, _Options, _StrideType> >
19
+ : public traits<Map<_PlainObjectType, _Options, _StrideType> >
20
+ {
21
+ typedef _PlainObjectType PlainObjectType;
22
+ typedef _StrideType StrideType;
23
+ enum {
24
+ Options = _Options,
25
+ Flags = traits<Map<_PlainObjectType, _Options, _StrideType> >::Flags | NestByRefBit,
26
+ Alignment = traits<Map<_PlainObjectType, _Options, _StrideType> >::Alignment
27
+ };
28
+
29
+ template<typename Derived> struct match {
30
+ enum {
31
+ IsVectorAtCompileTime = PlainObjectType::IsVectorAtCompileTime || Derived::IsVectorAtCompileTime,
32
+ HasDirectAccess = internal::has_direct_access<Derived>::ret,
33
+ StorageOrderMatch = IsVectorAtCompileTime || ((PlainObjectType::Flags&RowMajorBit)==(Derived::Flags&RowMajorBit)),
34
+ InnerStrideMatch = int(StrideType::InnerStrideAtCompileTime)==int(Dynamic)
35
+ || int(StrideType::InnerStrideAtCompileTime)==int(Derived::InnerStrideAtCompileTime)
36
+ || (int(StrideType::InnerStrideAtCompileTime)==0 && int(Derived::InnerStrideAtCompileTime)==1),
37
+ OuterStrideMatch = IsVectorAtCompileTime
38
+ || int(StrideType::OuterStrideAtCompileTime)==int(Dynamic) || int(StrideType::OuterStrideAtCompileTime)==int(Derived::OuterStrideAtCompileTime),
39
+ // NOTE, this indirection of evaluator<Derived>::Alignment is needed
40
+ // to workaround a very strange bug in MSVC related to the instantiation
41
+ // of has_*ary_operator in evaluator<CwiseNullaryOp>.
42
+ // This line is surprisingly very sensitive. For instance, simply adding parenthesis
43
+ // as "DerivedAlignment = (int(evaluator<Derived>::Alignment))," will make MSVC fail...
44
+ DerivedAlignment = int(evaluator<Derived>::Alignment),
45
+ AlignmentMatch = (int(traits<PlainObjectType>::Alignment)==int(Unaligned)) || (DerivedAlignment >= int(Alignment)), // FIXME the first condition is not very clear, it should be replaced by the required alignment
46
+ ScalarTypeMatch = internal::is_same<typename PlainObjectType::Scalar, typename Derived::Scalar>::value,
47
+ MatchAtCompileTime = HasDirectAccess && StorageOrderMatch && InnerStrideMatch && OuterStrideMatch && AlignmentMatch && ScalarTypeMatch
48
+ };
49
+ typedef typename internal::conditional<MatchAtCompileTime,internal::true_type,internal::false_type>::type type;
50
+ };
51
+
52
+ };
53
+
54
+ template<typename Derived>
55
+ struct traits<RefBase<Derived> > : public traits<Derived> {};
56
+
57
+ }
58
+
59
+ template<typename Derived> class RefBase
60
+ : public MapBase<Derived>
61
+ {
62
+ typedef typename internal::traits<Derived>::PlainObjectType PlainObjectType;
63
+ typedef typename internal::traits<Derived>::StrideType StrideType;
64
+
65
+ public:
66
+
67
+ typedef MapBase<Derived> Base;
68
+ EIGEN_DENSE_PUBLIC_INTERFACE(RefBase)
69
+
70
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR inline Index innerStride() const
71
+ {
72
+ return StrideType::InnerStrideAtCompileTime != 0 ? m_stride.inner() : 1;
73
+ }
74
+
75
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR inline Index outerStride() const
76
+ {
77
+ return StrideType::OuterStrideAtCompileTime != 0 ? m_stride.outer()
78
+ : IsVectorAtCompileTime ? this->size()
79
+ : int(Flags)&RowMajorBit ? this->cols()
80
+ : this->rows();
81
+ }
82
+
83
+ EIGEN_DEVICE_FUNC RefBase()
84
+ : Base(0,RowsAtCompileTime==Dynamic?0:RowsAtCompileTime,ColsAtCompileTime==Dynamic?0:ColsAtCompileTime),
85
+ // Stride<> does not allow default ctor for Dynamic strides, so let' initialize it with dummy values:
86
+ m_stride(StrideType::OuterStrideAtCompileTime==Dynamic?0:StrideType::OuterStrideAtCompileTime,
87
+ StrideType::InnerStrideAtCompileTime==Dynamic?0:StrideType::InnerStrideAtCompileTime)
88
+ {}
89
+
90
+ EIGEN_INHERIT_ASSIGNMENT_OPERATORS(RefBase)
91
+
92
+ protected:
93
+
94
+ typedef Stride<StrideType::OuterStrideAtCompileTime,StrideType::InnerStrideAtCompileTime> StrideBase;
95
+
96
+ // Resolves inner stride if default 0.
97
+ static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR Index resolveInnerStride(Index inner) {
98
+ return inner == 0 ? 1 : inner;
99
+ }
100
+
101
+ // Resolves outer stride if default 0.
102
+ static EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR Index resolveOuterStride(Index inner, Index outer, Index rows, Index cols, bool isVectorAtCompileTime, bool isRowMajor) {
103
+ return outer == 0 ? isVectorAtCompileTime ? inner * rows * cols : isRowMajor ? inner * cols : inner * rows : outer;
104
+ }
105
+
106
+ // Returns true if construction is valid, false if there is a stride mismatch,
107
+ // and fails if there is a size mismatch.
108
+ template<typename Expression>
109
+ EIGEN_DEVICE_FUNC bool construct(Expression& expr)
110
+ {
111
+ // Check matrix sizes. If this is a compile-time vector, we do allow
112
+ // implicitly transposing.
113
+ EIGEN_STATIC_ASSERT(
114
+ EIGEN_PREDICATE_SAME_MATRIX_SIZE(PlainObjectType, Expression)
115
+ // If it is a vector, the transpose sizes might match.
116
+ || ( PlainObjectType::IsVectorAtCompileTime
117
+ && ((int(PlainObjectType::RowsAtCompileTime)==Eigen::Dynamic
118
+ || int(Expression::ColsAtCompileTime)==Eigen::Dynamic
119
+ || int(PlainObjectType::RowsAtCompileTime)==int(Expression::ColsAtCompileTime))
120
+ && (int(PlainObjectType::ColsAtCompileTime)==Eigen::Dynamic
121
+ || int(Expression::RowsAtCompileTime)==Eigen::Dynamic
122
+ || int(PlainObjectType::ColsAtCompileTime)==int(Expression::RowsAtCompileTime)))),
123
+ YOU_MIXED_MATRICES_OF_DIFFERENT_SIZES
124
+ )
125
+
126
+ // Determine runtime rows and columns.
127
+ Index rows = expr.rows();
128
+ Index cols = expr.cols();
129
+ if(PlainObjectType::RowsAtCompileTime==1)
130
+ {
131
+ eigen_assert(expr.rows()==1 || expr.cols()==1);
132
+ rows = 1;
133
+ cols = expr.size();
134
+ }
135
+ else if(PlainObjectType::ColsAtCompileTime==1)
136
+ {
137
+ eigen_assert(expr.rows()==1 || expr.cols()==1);
138
+ rows = expr.size();
139
+ cols = 1;
140
+ }
141
+ // Verify that the sizes are valid.
142
+ eigen_assert(
143
+ (PlainObjectType::RowsAtCompileTime == Dynamic) || (PlainObjectType::RowsAtCompileTime == rows));
144
+ eigen_assert(
145
+ (PlainObjectType::ColsAtCompileTime == Dynamic) || (PlainObjectType::ColsAtCompileTime == cols));
146
+
147
+
148
+ // If this is a vector, we might be transposing, which means that stride should swap.
149
+ const bool transpose = PlainObjectType::IsVectorAtCompileTime && (rows != expr.rows());
150
+ // If the storage format differs, we also need to swap the stride.
151
+ const bool row_major = ((PlainObjectType::Flags)&RowMajorBit) != 0;
152
+ const bool expr_row_major = (Expression::Flags&RowMajorBit) != 0;
153
+ const bool storage_differs = (row_major != expr_row_major);
154
+
155
+ const bool swap_stride = (transpose != storage_differs);
156
+
157
+ // Determine expr's actual strides, resolving any defaults if zero.
158
+ const Index expr_inner_actual = resolveInnerStride(expr.innerStride());
159
+ const Index expr_outer_actual = resolveOuterStride(expr_inner_actual,
160
+ expr.outerStride(),
161
+ expr.rows(),
162
+ expr.cols(),
163
+ Expression::IsVectorAtCompileTime != 0,
164
+ expr_row_major);
165
+
166
+ // If this is a column-major row vector or row-major column vector, the inner-stride
167
+ // is arbitrary, so set it to either the compile-time inner stride or 1.
168
+ const bool row_vector = (rows == 1);
169
+ const bool col_vector = (cols == 1);
170
+ const Index inner_stride =
171
+ ( (!row_major && row_vector) || (row_major && col_vector) ) ?
172
+ ( StrideType::InnerStrideAtCompileTime > 0 ? Index(StrideType::InnerStrideAtCompileTime) : 1)
173
+ : swap_stride ? expr_outer_actual : expr_inner_actual;
174
+
175
+ // If this is a column-major column vector or row-major row vector, the outer-stride
176
+ // is arbitrary, so set it to either the compile-time outer stride or vector size.
177
+ const Index outer_stride =
178
+ ( (!row_major && col_vector) || (row_major && row_vector) ) ?
179
+ ( StrideType::OuterStrideAtCompileTime > 0 ? Index(StrideType::OuterStrideAtCompileTime) : rows * cols * inner_stride)
180
+ : swap_stride ? expr_inner_actual : expr_outer_actual;
181
+
182
+ // Check if given inner/outer strides are compatible with compile-time strides.
183
+ const bool inner_valid = (StrideType::InnerStrideAtCompileTime == Dynamic)
184
+ || (resolveInnerStride(Index(StrideType::InnerStrideAtCompileTime)) == inner_stride);
185
+ if (!inner_valid) {
186
+ return false;
187
+ }
188
+
189
+ const bool outer_valid = (StrideType::OuterStrideAtCompileTime == Dynamic)
190
+ || (resolveOuterStride(
191
+ inner_stride,
192
+ Index(StrideType::OuterStrideAtCompileTime),
193
+ rows, cols, PlainObjectType::IsVectorAtCompileTime != 0,
194
+ row_major)
195
+ == outer_stride);
196
+ if (!outer_valid) {
197
+ return false;
198
+ }
199
+
200
+ ::new (static_cast<Base*>(this)) Base(expr.data(), rows, cols);
201
+ ::new (&m_stride) StrideBase(
202
+ (StrideType::OuterStrideAtCompileTime == 0) ? 0 : outer_stride,
203
+ (StrideType::InnerStrideAtCompileTime == 0) ? 0 : inner_stride );
204
+ return true;
205
+ }
206
+
207
+ StrideBase m_stride;
208
+ };
209
+
210
+ /** \class Ref
211
+ * \ingroup Core_Module
212
+ *
213
+ * \brief A matrix or vector expression mapping an existing expression
214
+ *
215
+ * \tparam PlainObjectType the equivalent matrix type of the mapped data
216
+ * \tparam Options specifies the pointer alignment in bytes. It can be: \c #Aligned128, , \c #Aligned64, \c #Aligned32, \c #Aligned16, \c #Aligned8 or \c #Unaligned.
217
+ * The default is \c #Unaligned.
218
+ * \tparam StrideType optionally specifies strides. By default, Ref implies a contiguous storage along the inner dimension (inner stride==1),
219
+ * but accepts a variable outer stride (leading dimension).
220
+ * This can be overridden by specifying strides.
221
+ * The type passed here must be a specialization of the Stride template, see examples below.
222
+ *
223
+ * This class provides a way to write non-template functions taking Eigen objects as parameters while limiting the number of copies.
224
+ * A Ref<> object can represent either a const expression or a l-value:
225
+ * \code
226
+ * // in-out argument:
227
+ * void foo1(Ref<VectorXf> x);
228
+ *
229
+ * // read-only const argument:
230
+ * void foo2(const Ref<const VectorXf>& x);
231
+ * \endcode
232
+ *
233
+ * In the in-out case, the input argument must satisfy the constraints of the actual Ref<> type, otherwise a compilation issue will be triggered.
234
+ * By default, a Ref<VectorXf> can reference any dense vector expression of float having a contiguous memory layout.
235
+ * Likewise, a Ref<MatrixXf> can reference any column-major dense matrix expression of float whose column's elements are contiguously stored with
236
+ * the possibility to have a constant space in-between each column, i.e. the inner stride must be equal to 1, but the outer stride (or leading dimension)
237
+ * can be greater than the number of rows.
238
+ *
239
+ * In the const case, if the input expression does not match the above requirement, then it is evaluated into a temporary before being passed to the function.
240
+ * Here are some examples:
241
+ * \code
242
+ * MatrixXf A;
243
+ * VectorXf a;
244
+ * foo1(a.head()); // OK
245
+ * foo1(A.col()); // OK
246
+ * foo1(A.row()); // Compilation error because here innerstride!=1
247
+ * foo2(A.row()); // Compilation error because A.row() is a 1xN object while foo2 is expecting a Nx1 object
248
+ * foo2(A.row().transpose()); // The row is copied into a contiguous temporary
249
+ * foo2(2*a); // The expression is evaluated into a temporary
250
+ * foo2(A.col().segment(2,4)); // No temporary
251
+ * \endcode
252
+ *
253
+ * The range of inputs that can be referenced without temporary can be enlarged using the last two template parameters.
254
+ * Here is an example accepting an innerstride!=1:
255
+ * \code
256
+ * // in-out argument:
257
+ * void foo3(Ref<VectorXf,0,InnerStride<> > x);
258
+ * foo3(A.row()); // OK
259
+ * \endcode
260
+ * The downside here is that the function foo3 might be significantly slower than foo1 because it won't be able to exploit vectorization, and will involve more
261
+ * expensive address computations even if the input is contiguously stored in memory. To overcome this issue, one might propose to overload internally calling a
262
+ * template function, e.g.:
263
+ * \code
264
+ * // in the .h:
265
+ * void foo(const Ref<MatrixXf>& A);
266
+ * void foo(const Ref<MatrixXf,0,Stride<> >& A);
267
+ *
268
+ * // in the .cpp:
269
+ * template<typename TypeOfA> void foo_impl(const TypeOfA& A) {
270
+ * ... // crazy code goes here
271
+ * }
272
+ * void foo(const Ref<MatrixXf>& A) { foo_impl(A); }
273
+ * void foo(const Ref<MatrixXf,0,Stride<> >& A) { foo_impl(A); }
274
+ * \endcode
275
+ *
276
+ * See also the following stackoverflow questions for further references:
277
+ * - <a href="http://stackoverflow.com/questions/21132538/correct-usage-of-the-eigenref-class">Correct usage of the Eigen::Ref<> class</a>
278
+ *
279
+ * \sa PlainObjectBase::Map(), \ref TopicStorageOrders
280
+ */
281
+ template<typename PlainObjectType, int Options, typename StrideType> class Ref
282
+ : public RefBase<Ref<PlainObjectType, Options, StrideType> >
283
+ {
284
+ private:
285
+ typedef internal::traits<Ref> Traits;
286
+ template<typename Derived>
287
+ EIGEN_DEVICE_FUNC inline Ref(const PlainObjectBase<Derived>& expr,
288
+ typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0);
289
+ public:
290
+
291
+ typedef RefBase<Ref> Base;
292
+ EIGEN_DENSE_PUBLIC_INTERFACE(Ref)
293
+
294
+
295
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
296
+ template<typename Derived>
297
+ EIGEN_DEVICE_FUNC inline Ref(PlainObjectBase<Derived>& expr,
298
+ typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0)
299
+ {
300
+ EIGEN_STATIC_ASSERT(bool(Traits::template match<Derived>::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
301
+ // Construction must pass since we will not create temprary storage in the non-const case.
302
+ const bool success = Base::construct(expr.derived());
303
+ EIGEN_UNUSED_VARIABLE(success)
304
+ eigen_assert(success);
305
+ }
306
+ template<typename Derived>
307
+ EIGEN_DEVICE_FUNC inline Ref(const DenseBase<Derived>& expr,
308
+ typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0)
309
+ #else
310
+ /** Implicit constructor from any dense expression */
311
+ template<typename Derived>
312
+ inline Ref(DenseBase<Derived>& expr)
313
+ #endif
314
+ {
315
+ EIGEN_STATIC_ASSERT(bool(internal::is_lvalue<Derived>::value), THIS_EXPRESSION_IS_NOT_A_LVALUE__IT_IS_READ_ONLY);
316
+ EIGEN_STATIC_ASSERT(bool(Traits::template match<Derived>::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
317
+ EIGEN_STATIC_ASSERT(!Derived::IsPlainObjectBase,THIS_EXPRESSION_IS_NOT_A_LVALUE__IT_IS_READ_ONLY);
318
+ // Construction must pass since we will not create temporary storage in the non-const case.
319
+ const bool success = Base::construct(expr.const_cast_derived());
320
+ EIGEN_UNUSED_VARIABLE(success)
321
+ eigen_assert(success);
322
+ }
323
+
324
+ EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Ref)
325
+
326
+ };
327
+
328
+ // this is the const ref version
329
+ template<typename TPlainObjectType, int Options, typename StrideType> class Ref<const TPlainObjectType, Options, StrideType>
330
+ : public RefBase<Ref<const TPlainObjectType, Options, StrideType> >
331
+ {
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+ typedef internal::traits<Ref> Traits;
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+ public:
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+
335
+ typedef RefBase<Ref> Base;
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+ EIGEN_DENSE_PUBLIC_INTERFACE(Ref)
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+
338
+ template<typename Derived>
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+ EIGEN_DEVICE_FUNC inline Ref(const DenseBase<Derived>& expr,
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+ typename internal::enable_if<bool(Traits::template match<Derived>::ScalarTypeMatch),Derived>::type* = 0)
341
+ {
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+ // std::cout << match_helper<Derived>::HasDirectAccess << "," << match_helper<Derived>::OuterStrideMatch << "," << match_helper<Derived>::InnerStrideMatch << "\n";
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+ // std::cout << int(StrideType::OuterStrideAtCompileTime) << " - " << int(Derived::OuterStrideAtCompileTime) << "\n";
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+ // std::cout << int(StrideType::InnerStrideAtCompileTime) << " - " << int(Derived::InnerStrideAtCompileTime) << "\n";
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+ construct(expr.derived(), typename Traits::template match<Derived>::type());
346
+ }
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+
348
+ EIGEN_DEVICE_FUNC inline Ref(const Ref& other) : Base(other) {
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+ // copy constructor shall not copy the m_object, to avoid unnecessary malloc and copy
350
+ }
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+
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+ template<typename OtherRef>
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+ EIGEN_DEVICE_FUNC inline Ref(const RefBase<OtherRef>& other) {
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+ construct(other.derived(), typename Traits::template match<OtherRef>::type());
355
+ }
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+
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+ protected:
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+
359
+ template<typename Expression>
360
+ EIGEN_DEVICE_FUNC void construct(const Expression& expr,internal::true_type)
361
+ {
362
+ // Check if we can use the underlying expr's storage directly, otherwise call the copy version.
363
+ if (!Base::construct(expr)) {
364
+ construct(expr, internal::false_type());
365
+ }
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+ }
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+
368
+ template<typename Expression>
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+ EIGEN_DEVICE_FUNC void construct(const Expression& expr, internal::false_type)
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+ {
371
+ internal::call_assignment_no_alias(m_object,expr,internal::assign_op<Scalar,Scalar>());
372
+ Base::construct(m_object);
373
+ }
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+
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+ protected:
376
+ TPlainObjectType m_object;
377
+ };
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+
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+ } // end namespace Eigen
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+
381
+ #endif // EIGEN_REF_H
@@ -0,0 +1,142 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
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+ //
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+ // Copyright (C) 2009-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
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+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
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+ #ifndef EIGEN_REPLICATE_H
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+ #define EIGEN_REPLICATE_H
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+
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+ namespace Eigen {
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+
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+ namespace internal {
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+ template<typename MatrixType,int RowFactor,int ColFactor>
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+ struct traits<Replicate<MatrixType,RowFactor,ColFactor> >
18
+ : traits<MatrixType>
19
+ {
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+ typedef typename MatrixType::Scalar Scalar;
21
+ typedef typename traits<MatrixType>::StorageKind StorageKind;
22
+ typedef typename traits<MatrixType>::XprKind XprKind;
23
+ typedef typename ref_selector<MatrixType>::type MatrixTypeNested;
24
+ typedef typename remove_reference<MatrixTypeNested>::type _MatrixTypeNested;
25
+ enum {
26
+ RowsAtCompileTime = RowFactor==Dynamic || int(MatrixType::RowsAtCompileTime)==Dynamic
27
+ ? Dynamic
28
+ : RowFactor * MatrixType::RowsAtCompileTime,
29
+ ColsAtCompileTime = ColFactor==Dynamic || int(MatrixType::ColsAtCompileTime)==Dynamic
30
+ ? Dynamic
31
+ : ColFactor * MatrixType::ColsAtCompileTime,
32
+ //FIXME we don't propagate the max sizes !!!
33
+ MaxRowsAtCompileTime = RowsAtCompileTime,
34
+ MaxColsAtCompileTime = ColsAtCompileTime,
35
+ IsRowMajor = MaxRowsAtCompileTime==1 && MaxColsAtCompileTime!=1 ? 1
36
+ : MaxColsAtCompileTime==1 && MaxRowsAtCompileTime!=1 ? 0
37
+ : (MatrixType::Flags & RowMajorBit) ? 1 : 0,
38
+
39
+ // FIXME enable DirectAccess with negative strides?
40
+ Flags = IsRowMajor ? RowMajorBit : 0
41
+ };
42
+ };
43
+ }
44
+
45
+ /**
46
+ * \class Replicate
47
+ * \ingroup Core_Module
48
+ *
49
+ * \brief Expression of the multiple replication of a matrix or vector
50
+ *
51
+ * \tparam MatrixType the type of the object we are replicating
52
+ * \tparam RowFactor number of repetitions at compile time along the vertical direction, can be Dynamic.
53
+ * \tparam ColFactor number of repetitions at compile time along the horizontal direction, can be Dynamic.
54
+ *
55
+ * This class represents an expression of the multiple replication of a matrix or vector.
56
+ * It is the return type of DenseBase::replicate() and most of the time
57
+ * this is the only way it is used.
58
+ *
59
+ * \sa DenseBase::replicate()
60
+ */
61
+ template<typename MatrixType,int RowFactor,int ColFactor> class Replicate
62
+ : public internal::dense_xpr_base< Replicate<MatrixType,RowFactor,ColFactor> >::type
63
+ {
64
+ typedef typename internal::traits<Replicate>::MatrixTypeNested MatrixTypeNested;
65
+ typedef typename internal::traits<Replicate>::_MatrixTypeNested _MatrixTypeNested;
66
+ public:
67
+
68
+ typedef typename internal::dense_xpr_base<Replicate>::type Base;
69
+ EIGEN_DENSE_PUBLIC_INTERFACE(Replicate)
70
+ typedef typename internal::remove_all<MatrixType>::type NestedExpression;
71
+
72
+ template<typename OriginalMatrixType>
73
+ EIGEN_DEVICE_FUNC
74
+ inline explicit Replicate(const OriginalMatrixType& matrix)
75
+ : m_matrix(matrix), m_rowFactor(RowFactor), m_colFactor(ColFactor)
76
+ {
77
+ EIGEN_STATIC_ASSERT((internal::is_same<typename internal::remove_const<MatrixType>::type,OriginalMatrixType>::value),
78
+ THE_MATRIX_OR_EXPRESSION_THAT_YOU_PASSED_DOES_NOT_HAVE_THE_EXPECTED_TYPE)
79
+ eigen_assert(RowFactor!=Dynamic && ColFactor!=Dynamic);
80
+ }
81
+
82
+ template<typename OriginalMatrixType>
83
+ EIGEN_DEVICE_FUNC
84
+ inline Replicate(const OriginalMatrixType& matrix, Index rowFactor, Index colFactor)
85
+ : m_matrix(matrix), m_rowFactor(rowFactor), m_colFactor(colFactor)
86
+ {
87
+ EIGEN_STATIC_ASSERT((internal::is_same<typename internal::remove_const<MatrixType>::type,OriginalMatrixType>::value),
88
+ THE_MATRIX_OR_EXPRESSION_THAT_YOU_PASSED_DOES_NOT_HAVE_THE_EXPECTED_TYPE)
89
+ }
90
+
91
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
92
+ inline Index rows() const { return m_matrix.rows() * m_rowFactor.value(); }
93
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
94
+ inline Index cols() const { return m_matrix.cols() * m_colFactor.value(); }
95
+
96
+ EIGEN_DEVICE_FUNC
97
+ const _MatrixTypeNested& nestedExpression() const
98
+ {
99
+ return m_matrix;
100
+ }
101
+
102
+ protected:
103
+ MatrixTypeNested m_matrix;
104
+ const internal::variable_if_dynamic<Index, RowFactor> m_rowFactor;
105
+ const internal::variable_if_dynamic<Index, ColFactor> m_colFactor;
106
+ };
107
+
108
+ /**
109
+ * \return an expression of the replication of \c *this
110
+ *
111
+ * Example: \include MatrixBase_replicate.cpp
112
+ * Output: \verbinclude MatrixBase_replicate.out
113
+ *
114
+ * \sa VectorwiseOp::replicate(), DenseBase::replicate(Index,Index), class Replicate
115
+ */
116
+ template<typename Derived>
117
+ template<int RowFactor, int ColFactor>
118
+ EIGEN_DEVICE_FUNC const Replicate<Derived,RowFactor,ColFactor>
119
+ DenseBase<Derived>::replicate() const
120
+ {
121
+ return Replicate<Derived,RowFactor,ColFactor>(derived());
122
+ }
123
+
124
+ /**
125
+ * \return an expression of the replication of each column (or row) of \c *this
126
+ *
127
+ * Example: \include DirectionWise_replicate_int.cpp
128
+ * Output: \verbinclude DirectionWise_replicate_int.out
129
+ *
130
+ * \sa VectorwiseOp::replicate(), DenseBase::replicate(), class Replicate
131
+ */
132
+ template<typename ExpressionType, int Direction>
133
+ EIGEN_DEVICE_FUNC const typename VectorwiseOp<ExpressionType,Direction>::ReplicateReturnType
134
+ VectorwiseOp<ExpressionType,Direction>::replicate(Index factor) const
135
+ {
136
+ return typename VectorwiseOp<ExpressionType,Direction>::ReplicateReturnType
137
+ (_expression(),Direction==Vertical?factor:1,Direction==Horizontal?factor:1);
138
+ }
139
+
140
+ } // end namespace Eigen
141
+
142
+ #endif // EIGEN_REPLICATE_H