umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,904 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
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+ //
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+ // Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
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+ // Copyright (C) 2010 Jitse Niesen <jitse@maths.leeds.ac.uk>
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+ //
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+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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+
11
+ #ifndef EIGEN_SELFADJOINTEIGENSOLVER_H
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+ #define EIGEN_SELFADJOINTEIGENSOLVER_H
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+
14
+ #include "./Tridiagonalization.h"
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+
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+ namespace Eigen {
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+
18
+ template<typename _MatrixType>
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+ class GeneralizedSelfAdjointEigenSolver;
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+
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+ namespace internal {
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+ template<typename SolverType,int Size,bool IsComplex> struct direct_selfadjoint_eigenvalues;
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+
24
+ template<typename MatrixType, typename DiagType, typename SubDiagType>
25
+ EIGEN_DEVICE_FUNC
26
+ ComputationInfo computeFromTridiagonal_impl(DiagType& diag, SubDiagType& subdiag, const Index maxIterations, bool computeEigenvectors, MatrixType& eivec);
27
+ }
28
+
29
+ /** \eigenvalues_module \ingroup Eigenvalues_Module
30
+ *
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+ *
32
+ * \class SelfAdjointEigenSolver
33
+ *
34
+ * \brief Computes eigenvalues and eigenvectors of selfadjoint matrices
35
+ *
36
+ * \tparam _MatrixType the type of the matrix of which we are computing the
37
+ * eigendecomposition; this is expected to be an instantiation of the Matrix
38
+ * class template.
39
+ *
40
+ * A matrix \f$ A \f$ is selfadjoint if it equals its adjoint. For real
41
+ * matrices, this means that the matrix is symmetric: it equals its
42
+ * transpose. This class computes the eigenvalues and eigenvectors of a
43
+ * selfadjoint matrix. These are the scalars \f$ \lambda \f$ and vectors
44
+ * \f$ v \f$ such that \f$ Av = \lambda v \f$. The eigenvalues of a
45
+ * selfadjoint matrix are always real. If \f$ D \f$ is a diagonal matrix with
46
+ * the eigenvalues on the diagonal, and \f$ V \f$ is a matrix with the
47
+ * eigenvectors as its columns, then \f$ A = V D V^{-1} \f$. This is called the
48
+ * eigendecomposition.
49
+ *
50
+ * For a selfadjoint matrix, \f$ V \f$ is unitary, meaning its inverse is equal
51
+ * to its adjoint, \f$ V^{-1} = V^{\dagger} \f$. If \f$ A \f$ is real, then
52
+ * \f$ V \f$ is also real and therefore orthogonal, meaning its inverse is
53
+ * equal to its transpose, \f$ V^{-1} = V^T \f$.
54
+ *
55
+ * The algorithm exploits the fact that the matrix is selfadjoint, making it
56
+ * faster and more accurate than the general purpose eigenvalue algorithms
57
+ * implemented in EigenSolver and ComplexEigenSolver.
58
+ *
59
+ * Only the \b lower \b triangular \b part of the input matrix is referenced.
60
+ *
61
+ * Call the function compute() to compute the eigenvalues and eigenvectors of
62
+ * a given matrix. Alternatively, you can use the
63
+ * SelfAdjointEigenSolver(const MatrixType&, int) constructor which computes
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+ * the eigenvalues and eigenvectors at construction time. Once the eigenvalue
65
+ * and eigenvectors are computed, they can be retrieved with the eigenvalues()
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+ * and eigenvectors() functions.
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+ *
68
+ * The documentation for SelfAdjointEigenSolver(const MatrixType&, int)
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+ * contains an example of the typical use of this class.
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+ *
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+ * To solve the \em generalized eigenvalue problem \f$ Av = \lambda Bv \f$ and
72
+ * the likes, see the class GeneralizedSelfAdjointEigenSolver.
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+ *
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+ * \sa MatrixBase::eigenvalues(), class EigenSolver, class ComplexEigenSolver
75
+ */
76
+ template<typename _MatrixType> class SelfAdjointEigenSolver
77
+ {
78
+ public:
79
+
80
+ typedef _MatrixType MatrixType;
81
+ enum {
82
+ Size = MatrixType::RowsAtCompileTime,
83
+ ColsAtCompileTime = MatrixType::ColsAtCompileTime,
84
+ Options = MatrixType::Options,
85
+ MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime
86
+ };
87
+
88
+ /** \brief Scalar type for matrices of type \p _MatrixType. */
89
+ typedef typename MatrixType::Scalar Scalar;
90
+ typedef Eigen::Index Index; ///< \deprecated since Eigen 3.3
91
+
92
+ typedef Matrix<Scalar,Size,Size,ColMajor,MaxColsAtCompileTime,MaxColsAtCompileTime> EigenvectorsType;
93
+
94
+ /** \brief Real scalar type for \p _MatrixType.
95
+ *
96
+ * This is just \c Scalar if #Scalar is real (e.g., \c float or
97
+ * \c double), and the type of the real part of \c Scalar if #Scalar is
98
+ * complex.
99
+ */
100
+ typedef typename NumTraits<Scalar>::Real RealScalar;
101
+
102
+ friend struct internal::direct_selfadjoint_eigenvalues<SelfAdjointEigenSolver,Size,NumTraits<Scalar>::IsComplex>;
103
+
104
+ /** \brief Type for vector of eigenvalues as returned by eigenvalues().
105
+ *
106
+ * This is a column vector with entries of type #RealScalar.
107
+ * The length of the vector is the size of \p _MatrixType.
108
+ */
109
+ typedef typename internal::plain_col_type<MatrixType, RealScalar>::type RealVectorType;
110
+ typedef Tridiagonalization<MatrixType> TridiagonalizationType;
111
+ typedef typename TridiagonalizationType::SubDiagonalType SubDiagonalType;
112
+
113
+ /** \brief Default constructor for fixed-size matrices.
114
+ *
115
+ * The default constructor is useful in cases in which the user intends to
116
+ * perform decompositions via compute(). This constructor
117
+ * can only be used if \p _MatrixType is a fixed-size matrix; use
118
+ * SelfAdjointEigenSolver(Index) for dynamic-size matrices.
119
+ *
120
+ * Example: \include SelfAdjointEigenSolver_SelfAdjointEigenSolver.cpp
121
+ * Output: \verbinclude SelfAdjointEigenSolver_SelfAdjointEigenSolver.out
122
+ */
123
+ EIGEN_DEVICE_FUNC
124
+ SelfAdjointEigenSolver()
125
+ : m_eivec(),
126
+ m_eivalues(),
127
+ m_subdiag(),
128
+ m_hcoeffs(),
129
+ m_info(InvalidInput),
130
+ m_isInitialized(false),
131
+ m_eigenvectorsOk(false)
132
+ { }
133
+
134
+ /** \brief Constructor, pre-allocates memory for dynamic-size matrices.
135
+ *
136
+ * \param [in] size Positive integer, size of the matrix whose
137
+ * eigenvalues and eigenvectors will be computed.
138
+ *
139
+ * This constructor is useful for dynamic-size matrices, when the user
140
+ * intends to perform decompositions via compute(). The \p size
141
+ * parameter is only used as a hint. It is not an error to give a wrong
142
+ * \p size, but it may impair performance.
143
+ *
144
+ * \sa compute() for an example
145
+ */
146
+ EIGEN_DEVICE_FUNC
147
+ explicit SelfAdjointEigenSolver(Index size)
148
+ : m_eivec(size, size),
149
+ m_eivalues(size),
150
+ m_subdiag(size > 1 ? size - 1 : 1),
151
+ m_hcoeffs(size > 1 ? size - 1 : 1),
152
+ m_isInitialized(false),
153
+ m_eigenvectorsOk(false)
154
+ {}
155
+
156
+ /** \brief Constructor; computes eigendecomposition of given matrix.
157
+ *
158
+ * \param[in] matrix Selfadjoint matrix whose eigendecomposition is to
159
+ * be computed. Only the lower triangular part of the matrix is referenced.
160
+ * \param[in] options Can be #ComputeEigenvectors (default) or #EigenvaluesOnly.
161
+ *
162
+ * This constructor calls compute(const MatrixType&, int) to compute the
163
+ * eigenvalues of the matrix \p matrix. The eigenvectors are computed if
164
+ * \p options equals #ComputeEigenvectors.
165
+ *
166
+ * Example: \include SelfAdjointEigenSolver_SelfAdjointEigenSolver_MatrixType.cpp
167
+ * Output: \verbinclude SelfAdjointEigenSolver_SelfAdjointEigenSolver_MatrixType.out
168
+ *
169
+ * \sa compute(const MatrixType&, int)
170
+ */
171
+ template<typename InputType>
172
+ EIGEN_DEVICE_FUNC
173
+ explicit SelfAdjointEigenSolver(const EigenBase<InputType>& matrix, int options = ComputeEigenvectors)
174
+ : m_eivec(matrix.rows(), matrix.cols()),
175
+ m_eivalues(matrix.cols()),
176
+ m_subdiag(matrix.rows() > 1 ? matrix.rows() - 1 : 1),
177
+ m_hcoeffs(matrix.cols() > 1 ? matrix.cols() - 1 : 1),
178
+ m_isInitialized(false),
179
+ m_eigenvectorsOk(false)
180
+ {
181
+ compute(matrix.derived(), options);
182
+ }
183
+
184
+ /** \brief Computes eigendecomposition of given matrix.
185
+ *
186
+ * \param[in] matrix Selfadjoint matrix whose eigendecomposition is to
187
+ * be computed. Only the lower triangular part of the matrix is referenced.
188
+ * \param[in] options Can be #ComputeEigenvectors (default) or #EigenvaluesOnly.
189
+ * \returns Reference to \c *this
190
+ *
191
+ * This function computes the eigenvalues of \p matrix. The eigenvalues()
192
+ * function can be used to retrieve them. If \p options equals #ComputeEigenvectors,
193
+ * then the eigenvectors are also computed and can be retrieved by
194
+ * calling eigenvectors().
195
+ *
196
+ * This implementation uses a symmetric QR algorithm. The matrix is first
197
+ * reduced to tridiagonal form using the Tridiagonalization class. The
198
+ * tridiagonal matrix is then brought to diagonal form with implicit
199
+ * symmetric QR steps with Wilkinson shift. Details can be found in
200
+ * Section 8.3 of Golub \& Van Loan, <i>%Matrix Computations</i>.
201
+ *
202
+ * The cost of the computation is about \f$ 9n^3 \f$ if the eigenvectors
203
+ * are required and \f$ 4n^3/3 \f$ if they are not required.
204
+ *
205
+ * This method reuses the memory in the SelfAdjointEigenSolver object that
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+ * was allocated when the object was constructed, if the size of the
207
+ * matrix does not change.
208
+ *
209
+ * Example: \include SelfAdjointEigenSolver_compute_MatrixType.cpp
210
+ * Output: \verbinclude SelfAdjointEigenSolver_compute_MatrixType.out
211
+ *
212
+ * \sa SelfAdjointEigenSolver(const MatrixType&, int)
213
+ */
214
+ template<typename InputType>
215
+ EIGEN_DEVICE_FUNC
216
+ SelfAdjointEigenSolver& compute(const EigenBase<InputType>& matrix, int options = ComputeEigenvectors);
217
+
218
+ /** \brief Computes eigendecomposition of given matrix using a closed-form algorithm
219
+ *
220
+ * This is a variant of compute(const MatrixType&, int options) which
221
+ * directly solves the underlying polynomial equation.
222
+ *
223
+ * Currently only 2x2 and 3x3 matrices for which the sizes are known at compile time are supported (e.g., Matrix3d).
224
+ *
225
+ * This method is usually significantly faster than the QR iterative algorithm
226
+ * but it might also be less accurate. It is also worth noting that
227
+ * for 3x3 matrices it involves trigonometric operations which are
228
+ * not necessarily available for all scalar types.
229
+ *
230
+ * For the 3x3 case, we observed the following worst case relative error regarding the eigenvalues:
231
+ * - double: 1e-8
232
+ * - float: 1e-3
233
+ *
234
+ * \sa compute(const MatrixType&, int options)
235
+ */
236
+ EIGEN_DEVICE_FUNC
237
+ SelfAdjointEigenSolver& computeDirect(const MatrixType& matrix, int options = ComputeEigenvectors);
238
+
239
+ /**
240
+ *\brief Computes the eigen decomposition from a tridiagonal symmetric matrix
241
+ *
242
+ * \param[in] diag The vector containing the diagonal of the matrix.
243
+ * \param[in] subdiag The subdiagonal of the matrix.
244
+ * \param[in] options Can be #ComputeEigenvectors (default) or #EigenvaluesOnly.
245
+ * \returns Reference to \c *this
246
+ *
247
+ * This function assumes that the matrix has been reduced to tridiagonal form.
248
+ *
249
+ * \sa compute(const MatrixType&, int) for more information
250
+ */
251
+ SelfAdjointEigenSolver& computeFromTridiagonal(const RealVectorType& diag, const SubDiagonalType& subdiag , int options=ComputeEigenvectors);
252
+
253
+ /** \brief Returns the eigenvectors of given matrix.
254
+ *
255
+ * \returns A const reference to the matrix whose columns are the eigenvectors.
256
+ *
257
+ * \pre The eigenvectors have been computed before.
258
+ *
259
+ * Column \f$ k \f$ of the returned matrix is an eigenvector corresponding
260
+ * to eigenvalue number \f$ k \f$ as returned by eigenvalues(). The
261
+ * eigenvectors are normalized to have (Euclidean) norm equal to one. If
262
+ * this object was used to solve the eigenproblem for the selfadjoint
263
+ * matrix \f$ A \f$, then the matrix returned by this function is the
264
+ * matrix \f$ V \f$ in the eigendecomposition \f$ A = V D V^{-1} \f$.
265
+ *
266
+ * For a selfadjoint matrix, \f$ V \f$ is unitary, meaning its inverse is equal
267
+ * to its adjoint, \f$ V^{-1} = V^{\dagger} \f$. If \f$ A \f$ is real, then
268
+ * \f$ V \f$ is also real and therefore orthogonal, meaning its inverse is
269
+ * equal to its transpose, \f$ V^{-1} = V^T \f$.
270
+ *
271
+ * Example: \include SelfAdjointEigenSolver_eigenvectors.cpp
272
+ * Output: \verbinclude SelfAdjointEigenSolver_eigenvectors.out
273
+ *
274
+ * \sa eigenvalues()
275
+ */
276
+ EIGEN_DEVICE_FUNC
277
+ const EigenvectorsType& eigenvectors() const
278
+ {
279
+ eigen_assert(m_isInitialized && "SelfAdjointEigenSolver is not initialized.");
280
+ eigen_assert(m_eigenvectorsOk && "The eigenvectors have not been computed together with the eigenvalues.");
281
+ return m_eivec;
282
+ }
283
+
284
+ /** \brief Returns the eigenvalues of given matrix.
285
+ *
286
+ * \returns A const reference to the column vector containing the eigenvalues.
287
+ *
288
+ * \pre The eigenvalues have been computed before.
289
+ *
290
+ * The eigenvalues are repeated according to their algebraic multiplicity,
291
+ * so there are as many eigenvalues as rows in the matrix. The eigenvalues
292
+ * are sorted in increasing order.
293
+ *
294
+ * Example: \include SelfAdjointEigenSolver_eigenvalues.cpp
295
+ * Output: \verbinclude SelfAdjointEigenSolver_eigenvalues.out
296
+ *
297
+ * \sa eigenvectors(), MatrixBase::eigenvalues()
298
+ */
299
+ EIGEN_DEVICE_FUNC
300
+ const RealVectorType& eigenvalues() const
301
+ {
302
+ eigen_assert(m_isInitialized && "SelfAdjointEigenSolver is not initialized.");
303
+ return m_eivalues;
304
+ }
305
+
306
+ /** \brief Computes the positive-definite square root of the matrix.
307
+ *
308
+ * \returns the positive-definite square root of the matrix
309
+ *
310
+ * \pre The eigenvalues and eigenvectors of a positive-definite matrix
311
+ * have been computed before.
312
+ *
313
+ * The square root of a positive-definite matrix \f$ A \f$ is the
314
+ * positive-definite matrix whose square equals \f$ A \f$. This function
315
+ * uses the eigendecomposition \f$ A = V D V^{-1} \f$ to compute the
316
+ * square root as \f$ A^{1/2} = V D^{1/2} V^{-1} \f$.
317
+ *
318
+ * Example: \include SelfAdjointEigenSolver_operatorSqrt.cpp
319
+ * Output: \verbinclude SelfAdjointEigenSolver_operatorSqrt.out
320
+ *
321
+ * \sa operatorInverseSqrt(), <a href="unsupported/group__MatrixFunctions__Module.html">MatrixFunctions Module</a>
322
+ */
323
+ EIGEN_DEVICE_FUNC
324
+ MatrixType operatorSqrt() const
325
+ {
326
+ eigen_assert(m_isInitialized && "SelfAdjointEigenSolver is not initialized.");
327
+ eigen_assert(m_eigenvectorsOk && "The eigenvectors have not been computed together with the eigenvalues.");
328
+ return m_eivec * m_eivalues.cwiseSqrt().asDiagonal() * m_eivec.adjoint();
329
+ }
330
+
331
+ /** \brief Computes the inverse square root of the matrix.
332
+ *
333
+ * \returns the inverse positive-definite square root of the matrix
334
+ *
335
+ * \pre The eigenvalues and eigenvectors of a positive-definite matrix
336
+ * have been computed before.
337
+ *
338
+ * This function uses the eigendecomposition \f$ A = V D V^{-1} \f$ to
339
+ * compute the inverse square root as \f$ V D^{-1/2} V^{-1} \f$. This is
340
+ * cheaper than first computing the square root with operatorSqrt() and
341
+ * then its inverse with MatrixBase::inverse().
342
+ *
343
+ * Example: \include SelfAdjointEigenSolver_operatorInverseSqrt.cpp
344
+ * Output: \verbinclude SelfAdjointEigenSolver_operatorInverseSqrt.out
345
+ *
346
+ * \sa operatorSqrt(), MatrixBase::inverse(), <a href="unsupported/group__MatrixFunctions__Module.html">MatrixFunctions Module</a>
347
+ */
348
+ EIGEN_DEVICE_FUNC
349
+ MatrixType operatorInverseSqrt() const
350
+ {
351
+ eigen_assert(m_isInitialized && "SelfAdjointEigenSolver is not initialized.");
352
+ eigen_assert(m_eigenvectorsOk && "The eigenvectors have not been computed together with the eigenvalues.");
353
+ return m_eivec * m_eivalues.cwiseInverse().cwiseSqrt().asDiagonal() * m_eivec.adjoint();
354
+ }
355
+
356
+ /** \brief Reports whether previous computation was successful.
357
+ *
358
+ * \returns \c Success if computation was successful, \c NoConvergence otherwise.
359
+ */
360
+ EIGEN_DEVICE_FUNC
361
+ ComputationInfo info() const
362
+ {
363
+ eigen_assert(m_isInitialized && "SelfAdjointEigenSolver is not initialized.");
364
+ return m_info;
365
+ }
366
+
367
+ /** \brief Maximum number of iterations.
368
+ *
369
+ * The algorithm terminates if it does not converge within m_maxIterations * n iterations, where n
370
+ * denotes the size of the matrix. This value is currently set to 30 (copied from LAPACK).
371
+ */
372
+ static const int m_maxIterations = 30;
373
+
374
+ protected:
375
+ static EIGEN_DEVICE_FUNC
376
+ void check_template_parameters()
377
+ {
378
+ EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
379
+ }
380
+
381
+ EigenvectorsType m_eivec;
382
+ RealVectorType m_eivalues;
383
+ typename TridiagonalizationType::SubDiagonalType m_subdiag;
384
+ typename TridiagonalizationType::CoeffVectorType m_hcoeffs;
385
+ ComputationInfo m_info;
386
+ bool m_isInitialized;
387
+ bool m_eigenvectorsOk;
388
+ };
389
+
390
+ namespace internal {
391
+ /** \internal
392
+ *
393
+ * \eigenvalues_module \ingroup Eigenvalues_Module
394
+ *
395
+ * Performs a QR step on a tridiagonal symmetric matrix represented as a
396
+ * pair of two vectors \a diag and \a subdiag.
397
+ *
398
+ * \param diag the diagonal part of the input selfadjoint tridiagonal matrix
399
+ * \param subdiag the sub-diagonal part of the input selfadjoint tridiagonal matrix
400
+ * \param start starting index of the submatrix to work on
401
+ * \param end last+1 index of the submatrix to work on
402
+ * \param matrixQ pointer to the column-major matrix holding the eigenvectors, can be 0
403
+ * \param n size of the input matrix
404
+ *
405
+ * For compilation efficiency reasons, this procedure does not use eigen expression
406
+ * for its arguments.
407
+ *
408
+ * Implemented from Golub's "Matrix Computations", algorithm 8.3.2:
409
+ * "implicit symmetric QR step with Wilkinson shift"
410
+ */
411
+ template<int StorageOrder,typename RealScalar, typename Scalar, typename Index>
412
+ EIGEN_DEVICE_FUNC
413
+ static void tridiagonal_qr_step(RealScalar* diag, RealScalar* subdiag, Index start, Index end, Scalar* matrixQ, Index n);
414
+ }
415
+
416
+ template<typename MatrixType>
417
+ template<typename InputType>
418
+ EIGEN_DEVICE_FUNC
419
+ SelfAdjointEigenSolver<MatrixType>& SelfAdjointEigenSolver<MatrixType>
420
+ ::compute(const EigenBase<InputType>& a_matrix, int options)
421
+ {
422
+ check_template_parameters();
423
+
424
+ const InputType &matrix(a_matrix.derived());
425
+
426
+ EIGEN_USING_STD(abs);
427
+ eigen_assert(matrix.cols() == matrix.rows());
428
+ eigen_assert((options&~(EigVecMask|GenEigMask))==0
429
+ && (options&EigVecMask)!=EigVecMask
430
+ && "invalid option parameter");
431
+ bool computeEigenvectors = (options&ComputeEigenvectors)==ComputeEigenvectors;
432
+ Index n = matrix.cols();
433
+ m_eivalues.resize(n,1);
434
+
435
+ if(n==1)
436
+ {
437
+ m_eivec = matrix;
438
+ m_eivalues.coeffRef(0,0) = numext::real(m_eivec.coeff(0,0));
439
+ if(computeEigenvectors)
440
+ m_eivec.setOnes(n,n);
441
+ m_info = Success;
442
+ m_isInitialized = true;
443
+ m_eigenvectorsOk = computeEigenvectors;
444
+ return *this;
445
+ }
446
+
447
+ // declare some aliases
448
+ RealVectorType& diag = m_eivalues;
449
+ EigenvectorsType& mat = m_eivec;
450
+
451
+ // map the matrix coefficients to [-1:1] to avoid over- and underflow.
452
+ mat = matrix.template triangularView<Lower>();
453
+ RealScalar scale = mat.cwiseAbs().maxCoeff();
454
+ if(scale==RealScalar(0)) scale = RealScalar(1);
455
+ mat.template triangularView<Lower>() /= scale;
456
+ m_subdiag.resize(n-1);
457
+ m_hcoeffs.resize(n-1);
458
+ internal::tridiagonalization_inplace(mat, diag, m_subdiag, m_hcoeffs, computeEigenvectors);
459
+
460
+ m_info = internal::computeFromTridiagonal_impl(diag, m_subdiag, m_maxIterations, computeEigenvectors, m_eivec);
461
+
462
+ // scale back the eigen values
463
+ m_eivalues *= scale;
464
+
465
+ m_isInitialized = true;
466
+ m_eigenvectorsOk = computeEigenvectors;
467
+ return *this;
468
+ }
469
+
470
+ template<typename MatrixType>
471
+ SelfAdjointEigenSolver<MatrixType>& SelfAdjointEigenSolver<MatrixType>
472
+ ::computeFromTridiagonal(const RealVectorType& diag, const SubDiagonalType& subdiag , int options)
473
+ {
474
+ //TODO : Add an option to scale the values beforehand
475
+ bool computeEigenvectors = (options&ComputeEigenvectors)==ComputeEigenvectors;
476
+
477
+ m_eivalues = diag;
478
+ m_subdiag = subdiag;
479
+ if (computeEigenvectors)
480
+ {
481
+ m_eivec.setIdentity(diag.size(), diag.size());
482
+ }
483
+ m_info = internal::computeFromTridiagonal_impl(m_eivalues, m_subdiag, m_maxIterations, computeEigenvectors, m_eivec);
484
+
485
+ m_isInitialized = true;
486
+ m_eigenvectorsOk = computeEigenvectors;
487
+ return *this;
488
+ }
489
+
490
+ namespace internal {
491
+ /**
492
+ * \internal
493
+ * \brief Compute the eigendecomposition from a tridiagonal matrix
494
+ *
495
+ * \param[in,out] diag : On input, the diagonal of the matrix, on output the eigenvalues
496
+ * \param[in,out] subdiag : The subdiagonal part of the matrix (entries are modified during the decomposition)
497
+ * \param[in] maxIterations : the maximum number of iterations
498
+ * \param[in] computeEigenvectors : whether the eigenvectors have to be computed or not
499
+ * \param[out] eivec : The matrix to store the eigenvectors if computeEigenvectors==true. Must be allocated on input.
500
+ * \returns \c Success or \c NoConvergence
501
+ */
502
+ template<typename MatrixType, typename DiagType, typename SubDiagType>
503
+ EIGEN_DEVICE_FUNC
504
+ ComputationInfo computeFromTridiagonal_impl(DiagType& diag, SubDiagType& subdiag, const Index maxIterations, bool computeEigenvectors, MatrixType& eivec)
505
+ {
506
+ ComputationInfo info;
507
+ typedef typename MatrixType::Scalar Scalar;
508
+
509
+ Index n = diag.size();
510
+ Index end = n-1;
511
+ Index start = 0;
512
+ Index iter = 0; // total number of iterations
513
+
514
+ typedef typename DiagType::RealScalar RealScalar;
515
+ const RealScalar considerAsZero = (std::numeric_limits<RealScalar>::min)();
516
+ const RealScalar precision_inv = RealScalar(1)/NumTraits<RealScalar>::epsilon();
517
+ while (end>0)
518
+ {
519
+ for (Index i = start; i<end; ++i) {
520
+ if (numext::abs(subdiag[i]) < considerAsZero) {
521
+ subdiag[i] = RealScalar(0);
522
+ } else {
523
+ // abs(subdiag[i]) <= epsilon * sqrt(abs(diag[i]) + abs(diag[i+1]))
524
+ // Scaled to prevent underflows.
525
+ const RealScalar scaled_subdiag = precision_inv * subdiag[i];
526
+ if (scaled_subdiag * scaled_subdiag <= (numext::abs(diag[i])+numext::abs(diag[i+1]))) {
527
+ subdiag[i] = RealScalar(0);
528
+ }
529
+ }
530
+ }
531
+
532
+ // find the largest unreduced block at the end of the matrix.
533
+ while (end>0 && subdiag[end-1]==RealScalar(0))
534
+ {
535
+ end--;
536
+ }
537
+ if (end<=0)
538
+ break;
539
+
540
+ // if we spent too many iterations, we give up
541
+ iter++;
542
+ if(iter > maxIterations * n) break;
543
+
544
+ start = end - 1;
545
+ while (start>0 && subdiag[start-1]!=0)
546
+ start--;
547
+
548
+ internal::tridiagonal_qr_step<MatrixType::Flags&RowMajorBit ? RowMajor : ColMajor>(diag.data(), subdiag.data(), start, end, computeEigenvectors ? eivec.data() : (Scalar*)0, n);
549
+ }
550
+ if (iter <= maxIterations * n)
551
+ info = Success;
552
+ else
553
+ info = NoConvergence;
554
+
555
+ // Sort eigenvalues and corresponding vectors.
556
+ // TODO make the sort optional ?
557
+ // TODO use a better sort algorithm !!
558
+ if (info == Success)
559
+ {
560
+ for (Index i = 0; i < n-1; ++i)
561
+ {
562
+ Index k;
563
+ diag.segment(i,n-i).minCoeff(&k);
564
+ if (k > 0)
565
+ {
566
+ numext::swap(diag[i], diag[k+i]);
567
+ if(computeEigenvectors)
568
+ eivec.col(i).swap(eivec.col(k+i));
569
+ }
570
+ }
571
+ }
572
+ return info;
573
+ }
574
+
575
+ template<typename SolverType,int Size,bool IsComplex> struct direct_selfadjoint_eigenvalues
576
+ {
577
+ EIGEN_DEVICE_FUNC
578
+ static inline void run(SolverType& eig, const typename SolverType::MatrixType& A, int options)
579
+ { eig.compute(A,options); }
580
+ };
581
+
582
+ template<typename SolverType> struct direct_selfadjoint_eigenvalues<SolverType,3,false>
583
+ {
584
+ typedef typename SolverType::MatrixType MatrixType;
585
+ typedef typename SolverType::RealVectorType VectorType;
586
+ typedef typename SolverType::Scalar Scalar;
587
+ typedef typename SolverType::EigenvectorsType EigenvectorsType;
588
+
589
+
590
+ /** \internal
591
+ * Computes the roots of the characteristic polynomial of \a m.
592
+ * For numerical stability m.trace() should be near zero and to avoid over- or underflow m should be normalized.
593
+ */
594
+ EIGEN_DEVICE_FUNC
595
+ static inline void computeRoots(const MatrixType& m, VectorType& roots)
596
+ {
597
+ EIGEN_USING_STD(sqrt)
598
+ EIGEN_USING_STD(atan2)
599
+ EIGEN_USING_STD(cos)
600
+ EIGEN_USING_STD(sin)
601
+ const Scalar s_inv3 = Scalar(1)/Scalar(3);
602
+ const Scalar s_sqrt3 = sqrt(Scalar(3));
603
+
604
+ // The characteristic equation is x^3 - c2*x^2 + c1*x - c0 = 0. The
605
+ // eigenvalues are the roots to this equation, all guaranteed to be
606
+ // real-valued, because the matrix is symmetric.
607
+ Scalar c0 = m(0,0)*m(1,1)*m(2,2) + Scalar(2)*m(1,0)*m(2,0)*m(2,1) - m(0,0)*m(2,1)*m(2,1) - m(1,1)*m(2,0)*m(2,0) - m(2,2)*m(1,0)*m(1,0);
608
+ Scalar c1 = m(0,0)*m(1,1) - m(1,0)*m(1,0) + m(0,0)*m(2,2) - m(2,0)*m(2,0) + m(1,1)*m(2,2) - m(2,1)*m(2,1);
609
+ Scalar c2 = m(0,0) + m(1,1) + m(2,2);
610
+
611
+ // Construct the parameters used in classifying the roots of the equation
612
+ // and in solving the equation for the roots in closed form.
613
+ Scalar c2_over_3 = c2*s_inv3;
614
+ Scalar a_over_3 = (c2*c2_over_3 - c1)*s_inv3;
615
+ a_over_3 = numext::maxi(a_over_3, Scalar(0));
616
+
617
+ Scalar half_b = Scalar(0.5)*(c0 + c2_over_3*(Scalar(2)*c2_over_3*c2_over_3 - c1));
618
+
619
+ Scalar q = a_over_3*a_over_3*a_over_3 - half_b*half_b;
620
+ q = numext::maxi(q, Scalar(0));
621
+
622
+ // Compute the eigenvalues by solving for the roots of the polynomial.
623
+ Scalar rho = sqrt(a_over_3);
624
+ Scalar theta = atan2(sqrt(q),half_b)*s_inv3; // since sqrt(q) > 0, atan2 is in [0, pi] and theta is in [0, pi/3]
625
+ Scalar cos_theta = cos(theta);
626
+ Scalar sin_theta = sin(theta);
627
+ // roots are already sorted, since cos is monotonically decreasing on [0, pi]
628
+ roots(0) = c2_over_3 - rho*(cos_theta + s_sqrt3*sin_theta); // == 2*rho*cos(theta+2pi/3)
629
+ roots(1) = c2_over_3 - rho*(cos_theta - s_sqrt3*sin_theta); // == 2*rho*cos(theta+ pi/3)
630
+ roots(2) = c2_over_3 + Scalar(2)*rho*cos_theta;
631
+ }
632
+
633
+ EIGEN_DEVICE_FUNC
634
+ static inline bool extract_kernel(MatrixType& mat, Ref<VectorType> res, Ref<VectorType> representative)
635
+ {
636
+ EIGEN_USING_STD(abs);
637
+ EIGEN_USING_STD(sqrt);
638
+ Index i0;
639
+ // Find non-zero column i0 (by construction, there must exist a non zero coefficient on the diagonal):
640
+ mat.diagonal().cwiseAbs().maxCoeff(&i0);
641
+ // mat.col(i0) is a good candidate for an orthogonal vector to the current eigenvector,
642
+ // so let's save it:
643
+ representative = mat.col(i0);
644
+ Scalar n0, n1;
645
+ VectorType c0, c1;
646
+ n0 = (c0 = representative.cross(mat.col((i0+1)%3))).squaredNorm();
647
+ n1 = (c1 = representative.cross(mat.col((i0+2)%3))).squaredNorm();
648
+ if(n0>n1) res = c0/sqrt(n0);
649
+ else res = c1/sqrt(n1);
650
+
651
+ return true;
652
+ }
653
+
654
+ EIGEN_DEVICE_FUNC
655
+ static inline void run(SolverType& solver, const MatrixType& mat, int options)
656
+ {
657
+ eigen_assert(mat.cols() == 3 && mat.cols() == mat.rows());
658
+ eigen_assert((options&~(EigVecMask|GenEigMask))==0
659
+ && (options&EigVecMask)!=EigVecMask
660
+ && "invalid option parameter");
661
+ bool computeEigenvectors = (options&ComputeEigenvectors)==ComputeEigenvectors;
662
+
663
+ EigenvectorsType& eivecs = solver.m_eivec;
664
+ VectorType& eivals = solver.m_eivalues;
665
+
666
+ // Shift the matrix to the mean eigenvalue and map the matrix coefficients to [-1:1] to avoid over- and underflow.
667
+ Scalar shift = mat.trace() / Scalar(3);
668
+ // TODO Avoid this copy. Currently it is necessary to suppress bogus values when determining maxCoeff and for computing the eigenvectors later
669
+ MatrixType scaledMat = mat.template selfadjointView<Lower>();
670
+ scaledMat.diagonal().array() -= shift;
671
+ Scalar scale = scaledMat.cwiseAbs().maxCoeff();
672
+ if(scale > 0) scaledMat /= scale; // TODO for scale==0 we could save the remaining operations
673
+
674
+ // compute the eigenvalues
675
+ computeRoots(scaledMat,eivals);
676
+
677
+ // compute the eigenvectors
678
+ if(computeEigenvectors)
679
+ {
680
+ if((eivals(2)-eivals(0))<=Eigen::NumTraits<Scalar>::epsilon())
681
+ {
682
+ // All three eigenvalues are numerically the same
683
+ eivecs.setIdentity();
684
+ }
685
+ else
686
+ {
687
+ MatrixType tmp;
688
+ tmp = scaledMat;
689
+
690
+ // Compute the eigenvector of the most distinct eigenvalue
691
+ Scalar d0 = eivals(2) - eivals(1);
692
+ Scalar d1 = eivals(1) - eivals(0);
693
+ Index k(0), l(2);
694
+ if(d0 > d1)
695
+ {
696
+ numext::swap(k,l);
697
+ d0 = d1;
698
+ }
699
+
700
+ // Compute the eigenvector of index k
701
+ {
702
+ tmp.diagonal().array () -= eivals(k);
703
+ // By construction, 'tmp' is of rank 2, and its kernel corresponds to the respective eigenvector.
704
+ extract_kernel(tmp, eivecs.col(k), eivecs.col(l));
705
+ }
706
+
707
+ // Compute eigenvector of index l
708
+ if(d0<=2*Eigen::NumTraits<Scalar>::epsilon()*d1)
709
+ {
710
+ // If d0 is too small, then the two other eigenvalues are numerically the same,
711
+ // and thus we only have to ortho-normalize the near orthogonal vector we saved above.
712
+ eivecs.col(l) -= eivecs.col(k).dot(eivecs.col(l))*eivecs.col(l);
713
+ eivecs.col(l).normalize();
714
+ }
715
+ else
716
+ {
717
+ tmp = scaledMat;
718
+ tmp.diagonal().array () -= eivals(l);
719
+
720
+ VectorType dummy;
721
+ extract_kernel(tmp, eivecs.col(l), dummy);
722
+ }
723
+
724
+ // Compute last eigenvector from the other two
725
+ eivecs.col(1) = eivecs.col(2).cross(eivecs.col(0)).normalized();
726
+ }
727
+ }
728
+
729
+ // Rescale back to the original size.
730
+ eivals *= scale;
731
+ eivals.array() += shift;
732
+
733
+ solver.m_info = Success;
734
+ solver.m_isInitialized = true;
735
+ solver.m_eigenvectorsOk = computeEigenvectors;
736
+ }
737
+ };
738
+
739
+ // 2x2 direct eigenvalues decomposition, code from Hauke Heibel
740
+ template<typename SolverType>
741
+ struct direct_selfadjoint_eigenvalues<SolverType,2,false>
742
+ {
743
+ typedef typename SolverType::MatrixType MatrixType;
744
+ typedef typename SolverType::RealVectorType VectorType;
745
+ typedef typename SolverType::Scalar Scalar;
746
+ typedef typename SolverType::EigenvectorsType EigenvectorsType;
747
+
748
+ EIGEN_DEVICE_FUNC
749
+ static inline void computeRoots(const MatrixType& m, VectorType& roots)
750
+ {
751
+ EIGEN_USING_STD(sqrt);
752
+ const Scalar t0 = Scalar(0.5) * sqrt( numext::abs2(m(0,0)-m(1,1)) + Scalar(4)*numext::abs2(m(1,0)));
753
+ const Scalar t1 = Scalar(0.5) * (m(0,0) + m(1,1));
754
+ roots(0) = t1 - t0;
755
+ roots(1) = t1 + t0;
756
+ }
757
+
758
+ EIGEN_DEVICE_FUNC
759
+ static inline void run(SolverType& solver, const MatrixType& mat, int options)
760
+ {
761
+ EIGEN_USING_STD(sqrt);
762
+ EIGEN_USING_STD(abs);
763
+
764
+ eigen_assert(mat.cols() == 2 && mat.cols() == mat.rows());
765
+ eigen_assert((options&~(EigVecMask|GenEigMask))==0
766
+ && (options&EigVecMask)!=EigVecMask
767
+ && "invalid option parameter");
768
+ bool computeEigenvectors = (options&ComputeEigenvectors)==ComputeEigenvectors;
769
+
770
+ EigenvectorsType& eivecs = solver.m_eivec;
771
+ VectorType& eivals = solver.m_eivalues;
772
+
773
+ // Shift the matrix to the mean eigenvalue and map the matrix coefficients to [-1:1] to avoid over- and underflow.
774
+ Scalar shift = mat.trace() / Scalar(2);
775
+ MatrixType scaledMat = mat;
776
+ scaledMat.coeffRef(0,1) = mat.coeff(1,0);
777
+ scaledMat.diagonal().array() -= shift;
778
+ Scalar scale = scaledMat.cwiseAbs().maxCoeff();
779
+ if(scale > Scalar(0))
780
+ scaledMat /= scale;
781
+
782
+ // Compute the eigenvalues
783
+ computeRoots(scaledMat,eivals);
784
+
785
+ // compute the eigen vectors
786
+ if(computeEigenvectors)
787
+ {
788
+ if((eivals(1)-eivals(0))<=abs(eivals(1))*Eigen::NumTraits<Scalar>::epsilon())
789
+ {
790
+ eivecs.setIdentity();
791
+ }
792
+ else
793
+ {
794
+ scaledMat.diagonal().array () -= eivals(1);
795
+ Scalar a2 = numext::abs2(scaledMat(0,0));
796
+ Scalar c2 = numext::abs2(scaledMat(1,1));
797
+ Scalar b2 = numext::abs2(scaledMat(1,0));
798
+ if(a2>c2)
799
+ {
800
+ eivecs.col(1) << -scaledMat(1,0), scaledMat(0,0);
801
+ eivecs.col(1) /= sqrt(a2+b2);
802
+ }
803
+ else
804
+ {
805
+ eivecs.col(1) << -scaledMat(1,1), scaledMat(1,0);
806
+ eivecs.col(1) /= sqrt(c2+b2);
807
+ }
808
+
809
+ eivecs.col(0) << eivecs.col(1).unitOrthogonal();
810
+ }
811
+ }
812
+
813
+ // Rescale back to the original size.
814
+ eivals *= scale;
815
+ eivals.array() += shift;
816
+
817
+ solver.m_info = Success;
818
+ solver.m_isInitialized = true;
819
+ solver.m_eigenvectorsOk = computeEigenvectors;
820
+ }
821
+ };
822
+
823
+ }
824
+
825
+ template<typename MatrixType>
826
+ EIGEN_DEVICE_FUNC
827
+ SelfAdjointEigenSolver<MatrixType>& SelfAdjointEigenSolver<MatrixType>
828
+ ::computeDirect(const MatrixType& matrix, int options)
829
+ {
830
+ internal::direct_selfadjoint_eigenvalues<SelfAdjointEigenSolver,Size,NumTraits<Scalar>::IsComplex>::run(*this,matrix,options);
831
+ return *this;
832
+ }
833
+
834
+ namespace internal {
835
+
836
+ // Francis implicit QR step.
837
+ template<int StorageOrder,typename RealScalar, typename Scalar, typename Index>
838
+ EIGEN_DEVICE_FUNC
839
+ static void tridiagonal_qr_step(RealScalar* diag, RealScalar* subdiag, Index start, Index end, Scalar* matrixQ, Index n)
840
+ {
841
+ // Wilkinson Shift.
842
+ RealScalar td = (diag[end-1] - diag[end])*RealScalar(0.5);
843
+ RealScalar e = subdiag[end-1];
844
+ // Note that thanks to scaling, e^2 or td^2 cannot overflow, however they can still
845
+ // underflow thus leading to inf/NaN values when using the following commented code:
846
+ // RealScalar e2 = numext::abs2(subdiag[end-1]);
847
+ // RealScalar mu = diag[end] - e2 / (td + (td>0 ? 1 : -1) * sqrt(td*td + e2));
848
+ // This explain the following, somewhat more complicated, version:
849
+ RealScalar mu = diag[end];
850
+ if(td==RealScalar(0)) {
851
+ mu -= numext::abs(e);
852
+ } else if (e != RealScalar(0)) {
853
+ const RealScalar e2 = numext::abs2(e);
854
+ const RealScalar h = numext::hypot(td,e);
855
+ if(e2 == RealScalar(0)) {
856
+ mu -= e / ((td + (td>RealScalar(0) ? h : -h)) / e);
857
+ } else {
858
+ mu -= e2 / (td + (td>RealScalar(0) ? h : -h));
859
+ }
860
+ }
861
+
862
+ RealScalar x = diag[start] - mu;
863
+ RealScalar z = subdiag[start];
864
+ // If z ever becomes zero, the Givens rotation will be the identity and
865
+ // z will stay zero for all future iterations.
866
+ for (Index k = start; k < end && z != RealScalar(0); ++k)
867
+ {
868
+ JacobiRotation<RealScalar> rot;
869
+ rot.makeGivens(x, z);
870
+
871
+ // do T = G' T G
872
+ RealScalar sdk = rot.s() * diag[k] + rot.c() * subdiag[k];
873
+ RealScalar dkp1 = rot.s() * subdiag[k] + rot.c() * diag[k+1];
874
+
875
+ diag[k] = rot.c() * (rot.c() * diag[k] - rot.s() * subdiag[k]) - rot.s() * (rot.c() * subdiag[k] - rot.s() * diag[k+1]);
876
+ diag[k+1] = rot.s() * sdk + rot.c() * dkp1;
877
+ subdiag[k] = rot.c() * sdk - rot.s() * dkp1;
878
+
879
+ if (k > start)
880
+ subdiag[k - 1] = rot.c() * subdiag[k-1] - rot.s() * z;
881
+
882
+ // "Chasing the bulge" to return to triangular form.
883
+ x = subdiag[k];
884
+ if (k < end - 1)
885
+ {
886
+ z = -rot.s() * subdiag[k+1];
887
+ subdiag[k + 1] = rot.c() * subdiag[k+1];
888
+ }
889
+
890
+ // apply the givens rotation to the unit matrix Q = Q * G
891
+ if (matrixQ)
892
+ {
893
+ // FIXME if StorageOrder == RowMajor this operation is not very efficient
894
+ Map<Matrix<Scalar,Dynamic,Dynamic,StorageOrder> > q(matrixQ,n,n);
895
+ q.applyOnTheRight(k,k+1,rot);
896
+ }
897
+ }
898
+ }
899
+
900
+ } // end namespace internal
901
+
902
+ } // end namespace Eigen
903
+
904
+ #endif // EIGEN_SELFADJOINTEIGENSOLVER_H