umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,545 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
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+ // Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
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+ // Copyright (C) 2010 Benoit Jacob <jacob.benoit.1@gmail.com>
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+ //
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+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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+
11
+ #ifndef EIGEN_HOUSEHOLDER_SEQUENCE_H
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+ #define EIGEN_HOUSEHOLDER_SEQUENCE_H
13
+
14
+ namespace Eigen {
15
+
16
+ /** \ingroup Householder_Module
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+ * \householder_module
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+ * \class HouseholderSequence
19
+ * \brief Sequence of Householder reflections acting on subspaces with decreasing size
20
+ * \tparam VectorsType type of matrix containing the Householder vectors
21
+ * \tparam CoeffsType type of vector containing the Householder coefficients
22
+ * \tparam Side either OnTheLeft (the default) or OnTheRight
23
+ *
24
+ * This class represents a product sequence of Householder reflections where the first Householder reflection
25
+ * acts on the whole space, the second Householder reflection leaves the one-dimensional subspace spanned by
26
+ * the first unit vector invariant, the third Householder reflection leaves the two-dimensional subspace
27
+ * spanned by the first two unit vectors invariant, and so on up to the last reflection which leaves all but
28
+ * one dimensions invariant and acts only on the last dimension. Such sequences of Householder reflections
29
+ * are used in several algorithms to zero out certain parts of a matrix. Indeed, the methods
30
+ * HessenbergDecomposition::matrixQ(), Tridiagonalization::matrixQ(), HouseholderQR::householderQ(),
31
+ * and ColPivHouseholderQR::householderQ() all return a %HouseholderSequence.
32
+ *
33
+ * More precisely, the class %HouseholderSequence represents an \f$ n \times n \f$ matrix \f$ H \f$ of the
34
+ * form \f$ H = \prod_{i=0}^{n-1} H_i \f$ where the i-th Householder reflection is \f$ H_i = I - h_i v_i
35
+ * v_i^* \f$. The i-th Householder coefficient \f$ h_i \f$ is a scalar and the i-th Householder vector \f$
36
+ * v_i \f$ is a vector of the form
37
+ * \f[
38
+ * v_i = [\underbrace{0, \ldots, 0}_{i-1\mbox{ zeros}}, 1, \underbrace{*, \ldots,*}_{n-i\mbox{ arbitrary entries}} ].
39
+ * \f]
40
+ * The last \f$ n-i \f$ entries of \f$ v_i \f$ are called the essential part of the Householder vector.
41
+ *
42
+ * Typical usages are listed below, where H is a HouseholderSequence:
43
+ * \code
44
+ * A.applyOnTheRight(H); // A = A * H
45
+ * A.applyOnTheLeft(H); // A = H * A
46
+ * A.applyOnTheRight(H.adjoint()); // A = A * H^*
47
+ * A.applyOnTheLeft(H.adjoint()); // A = H^* * A
48
+ * MatrixXd Q = H; // conversion to a dense matrix
49
+ * \endcode
50
+ * In addition to the adjoint, you can also apply the inverse (=adjoint), the transpose, and the conjugate operators.
51
+ *
52
+ * See the documentation for HouseholderSequence(const VectorsType&, const CoeffsType&) for an example.
53
+ *
54
+ * \sa MatrixBase::applyOnTheLeft(), MatrixBase::applyOnTheRight()
55
+ */
56
+
57
+ namespace internal {
58
+
59
+ template<typename VectorsType, typename CoeffsType, int Side>
60
+ struct traits<HouseholderSequence<VectorsType,CoeffsType,Side> >
61
+ {
62
+ typedef typename VectorsType::Scalar Scalar;
63
+ typedef typename VectorsType::StorageIndex StorageIndex;
64
+ typedef typename VectorsType::StorageKind StorageKind;
65
+ enum {
66
+ RowsAtCompileTime = Side==OnTheLeft ? traits<VectorsType>::RowsAtCompileTime
67
+ : traits<VectorsType>::ColsAtCompileTime,
68
+ ColsAtCompileTime = RowsAtCompileTime,
69
+ MaxRowsAtCompileTime = Side==OnTheLeft ? traits<VectorsType>::MaxRowsAtCompileTime
70
+ : traits<VectorsType>::MaxColsAtCompileTime,
71
+ MaxColsAtCompileTime = MaxRowsAtCompileTime,
72
+ Flags = 0
73
+ };
74
+ };
75
+
76
+ struct HouseholderSequenceShape {};
77
+
78
+ template<typename VectorsType, typename CoeffsType, int Side>
79
+ struct evaluator_traits<HouseholderSequence<VectorsType,CoeffsType,Side> >
80
+ : public evaluator_traits_base<HouseholderSequence<VectorsType,CoeffsType,Side> >
81
+ {
82
+ typedef HouseholderSequenceShape Shape;
83
+ };
84
+
85
+ template<typename VectorsType, typename CoeffsType, int Side>
86
+ struct hseq_side_dependent_impl
87
+ {
88
+ typedef Block<const VectorsType, Dynamic, 1> EssentialVectorType;
89
+ typedef HouseholderSequence<VectorsType, CoeffsType, OnTheLeft> HouseholderSequenceType;
90
+ static EIGEN_DEVICE_FUNC inline const EssentialVectorType essentialVector(const HouseholderSequenceType& h, Index k)
91
+ {
92
+ Index start = k+1+h.m_shift;
93
+ return Block<const VectorsType,Dynamic,1>(h.m_vectors, start, k, h.rows()-start, 1);
94
+ }
95
+ };
96
+
97
+ template<typename VectorsType, typename CoeffsType>
98
+ struct hseq_side_dependent_impl<VectorsType, CoeffsType, OnTheRight>
99
+ {
100
+ typedef Transpose<Block<const VectorsType, 1, Dynamic> > EssentialVectorType;
101
+ typedef HouseholderSequence<VectorsType, CoeffsType, OnTheRight> HouseholderSequenceType;
102
+ static inline const EssentialVectorType essentialVector(const HouseholderSequenceType& h, Index k)
103
+ {
104
+ Index start = k+1+h.m_shift;
105
+ return Block<const VectorsType,1,Dynamic>(h.m_vectors, k, start, 1, h.rows()-start).transpose();
106
+ }
107
+ };
108
+
109
+ template<typename OtherScalarType, typename MatrixType> struct matrix_type_times_scalar_type
110
+ {
111
+ typedef typename ScalarBinaryOpTraits<OtherScalarType, typename MatrixType::Scalar>::ReturnType
112
+ ResultScalar;
113
+ typedef Matrix<ResultScalar, MatrixType::RowsAtCompileTime, MatrixType::ColsAtCompileTime,
114
+ 0, MatrixType::MaxRowsAtCompileTime, MatrixType::MaxColsAtCompileTime> Type;
115
+ };
116
+
117
+ } // end namespace internal
118
+
119
+ template<typename VectorsType, typename CoeffsType, int Side> class HouseholderSequence
120
+ : public EigenBase<HouseholderSequence<VectorsType,CoeffsType,Side> >
121
+ {
122
+ typedef typename internal::hseq_side_dependent_impl<VectorsType,CoeffsType,Side>::EssentialVectorType EssentialVectorType;
123
+
124
+ public:
125
+ enum {
126
+ RowsAtCompileTime = internal::traits<HouseholderSequence>::RowsAtCompileTime,
127
+ ColsAtCompileTime = internal::traits<HouseholderSequence>::ColsAtCompileTime,
128
+ MaxRowsAtCompileTime = internal::traits<HouseholderSequence>::MaxRowsAtCompileTime,
129
+ MaxColsAtCompileTime = internal::traits<HouseholderSequence>::MaxColsAtCompileTime
130
+ };
131
+ typedef typename internal::traits<HouseholderSequence>::Scalar Scalar;
132
+
133
+ typedef HouseholderSequence<
134
+ typename internal::conditional<NumTraits<Scalar>::IsComplex,
135
+ typename internal::remove_all<typename VectorsType::ConjugateReturnType>::type,
136
+ VectorsType>::type,
137
+ typename internal::conditional<NumTraits<Scalar>::IsComplex,
138
+ typename internal::remove_all<typename CoeffsType::ConjugateReturnType>::type,
139
+ CoeffsType>::type,
140
+ Side
141
+ > ConjugateReturnType;
142
+
143
+ typedef HouseholderSequence<
144
+ VectorsType,
145
+ typename internal::conditional<NumTraits<Scalar>::IsComplex,
146
+ typename internal::remove_all<typename CoeffsType::ConjugateReturnType>::type,
147
+ CoeffsType>::type,
148
+ Side
149
+ > AdjointReturnType;
150
+
151
+ typedef HouseholderSequence<
152
+ typename internal::conditional<NumTraits<Scalar>::IsComplex,
153
+ typename internal::remove_all<typename VectorsType::ConjugateReturnType>::type,
154
+ VectorsType>::type,
155
+ CoeffsType,
156
+ Side
157
+ > TransposeReturnType;
158
+
159
+ typedef HouseholderSequence<
160
+ typename internal::add_const<VectorsType>::type,
161
+ typename internal::add_const<CoeffsType>::type,
162
+ Side
163
+ > ConstHouseholderSequence;
164
+
165
+ /** \brief Constructor.
166
+ * \param[in] v %Matrix containing the essential parts of the Householder vectors
167
+ * \param[in] h Vector containing the Householder coefficients
168
+ *
169
+ * Constructs the Householder sequence with coefficients given by \p h and vectors given by \p v. The
170
+ * i-th Householder coefficient \f$ h_i \f$ is given by \p h(i) and the essential part of the i-th
171
+ * Householder vector \f$ v_i \f$ is given by \p v(k,i) with \p k > \p i (the subdiagonal part of the
172
+ * i-th column). If \p v has fewer columns than rows, then the Householder sequence contains as many
173
+ * Householder reflections as there are columns.
174
+ *
175
+ * \note The %HouseholderSequence object stores \p v and \p h by reference.
176
+ *
177
+ * Example: \include HouseholderSequence_HouseholderSequence.cpp
178
+ * Output: \verbinclude HouseholderSequence_HouseholderSequence.out
179
+ *
180
+ * \sa setLength(), setShift()
181
+ */
182
+ EIGEN_DEVICE_FUNC
183
+ HouseholderSequence(const VectorsType& v, const CoeffsType& h)
184
+ : m_vectors(v), m_coeffs(h), m_reverse(false), m_length(v.diagonalSize()),
185
+ m_shift(0)
186
+ {
187
+ }
188
+
189
+ /** \brief Copy constructor. */
190
+ EIGEN_DEVICE_FUNC
191
+ HouseholderSequence(const HouseholderSequence& other)
192
+ : m_vectors(other.m_vectors),
193
+ m_coeffs(other.m_coeffs),
194
+ m_reverse(other.m_reverse),
195
+ m_length(other.m_length),
196
+ m_shift(other.m_shift)
197
+ {
198
+ }
199
+
200
+ /** \brief Number of rows of transformation viewed as a matrix.
201
+ * \returns Number of rows
202
+ * \details This equals the dimension of the space that the transformation acts on.
203
+ */
204
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
205
+ Index rows() const EIGEN_NOEXCEPT { return Side==OnTheLeft ? m_vectors.rows() : m_vectors.cols(); }
206
+
207
+ /** \brief Number of columns of transformation viewed as a matrix.
208
+ * \returns Number of columns
209
+ * \details This equals the dimension of the space that the transformation acts on.
210
+ */
211
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
212
+ Index cols() const EIGEN_NOEXCEPT { return rows(); }
213
+
214
+ /** \brief Essential part of a Householder vector.
215
+ * \param[in] k Index of Householder reflection
216
+ * \returns Vector containing non-trivial entries of k-th Householder vector
217
+ *
218
+ * This function returns the essential part of the Householder vector \f$ v_i \f$. This is a vector of
219
+ * length \f$ n-i \f$ containing the last \f$ n-i \f$ entries of the vector
220
+ * \f[
221
+ * v_i = [\underbrace{0, \ldots, 0}_{i-1\mbox{ zeros}}, 1, \underbrace{*, \ldots,*}_{n-i\mbox{ arbitrary entries}} ].
222
+ * \f]
223
+ * The index \f$ i \f$ equals \p k + shift(), corresponding to the k-th column of the matrix \p v
224
+ * passed to the constructor.
225
+ *
226
+ * \sa setShift(), shift()
227
+ */
228
+ EIGEN_DEVICE_FUNC
229
+ const EssentialVectorType essentialVector(Index k) const
230
+ {
231
+ eigen_assert(k >= 0 && k < m_length);
232
+ return internal::hseq_side_dependent_impl<VectorsType,CoeffsType,Side>::essentialVector(*this, k);
233
+ }
234
+
235
+ /** \brief %Transpose of the Householder sequence. */
236
+ TransposeReturnType transpose() const
237
+ {
238
+ return TransposeReturnType(m_vectors.conjugate(), m_coeffs)
239
+ .setReverseFlag(!m_reverse)
240
+ .setLength(m_length)
241
+ .setShift(m_shift);
242
+ }
243
+
244
+ /** \brief Complex conjugate of the Householder sequence. */
245
+ ConjugateReturnType conjugate() const
246
+ {
247
+ return ConjugateReturnType(m_vectors.conjugate(), m_coeffs.conjugate())
248
+ .setReverseFlag(m_reverse)
249
+ .setLength(m_length)
250
+ .setShift(m_shift);
251
+ }
252
+
253
+ /** \returns an expression of the complex conjugate of \c *this if Cond==true,
254
+ * returns \c *this otherwise.
255
+ */
256
+ template<bool Cond>
257
+ EIGEN_DEVICE_FUNC
258
+ inline typename internal::conditional<Cond,ConjugateReturnType,ConstHouseholderSequence>::type
259
+ conjugateIf() const
260
+ {
261
+ typedef typename internal::conditional<Cond,ConjugateReturnType,ConstHouseholderSequence>::type ReturnType;
262
+ return ReturnType(m_vectors.template conjugateIf<Cond>(), m_coeffs.template conjugateIf<Cond>());
263
+ }
264
+
265
+ /** \brief Adjoint (conjugate transpose) of the Householder sequence. */
266
+ AdjointReturnType adjoint() const
267
+ {
268
+ return AdjointReturnType(m_vectors, m_coeffs.conjugate())
269
+ .setReverseFlag(!m_reverse)
270
+ .setLength(m_length)
271
+ .setShift(m_shift);
272
+ }
273
+
274
+ /** \brief Inverse of the Householder sequence (equals the adjoint). */
275
+ AdjointReturnType inverse() const { return adjoint(); }
276
+
277
+ /** \internal */
278
+ template<typename DestType>
279
+ inline EIGEN_DEVICE_FUNC
280
+ void evalTo(DestType& dst) const
281
+ {
282
+ Matrix<Scalar, DestType::RowsAtCompileTime, 1,
283
+ AutoAlign|ColMajor, DestType::MaxRowsAtCompileTime, 1> workspace(rows());
284
+ evalTo(dst, workspace);
285
+ }
286
+
287
+ /** \internal */
288
+ template<typename Dest, typename Workspace>
289
+ EIGEN_DEVICE_FUNC
290
+ void evalTo(Dest& dst, Workspace& workspace) const
291
+ {
292
+ workspace.resize(rows());
293
+ Index vecs = m_length;
294
+ if(internal::is_same_dense(dst,m_vectors))
295
+ {
296
+ // in-place
297
+ dst.diagonal().setOnes();
298
+ dst.template triangularView<StrictlyUpper>().setZero();
299
+ for(Index k = vecs-1; k >= 0; --k)
300
+ {
301
+ Index cornerSize = rows() - k - m_shift;
302
+ if(m_reverse)
303
+ dst.bottomRightCorner(cornerSize, cornerSize)
304
+ .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data());
305
+ else
306
+ dst.bottomRightCorner(cornerSize, cornerSize)
307
+ .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data());
308
+
309
+ // clear the off diagonal vector
310
+ dst.col(k).tail(rows()-k-1).setZero();
311
+ }
312
+ // clear the remaining columns if needed
313
+ for(Index k = 0; k<cols()-vecs ; ++k)
314
+ dst.col(k).tail(rows()-k-1).setZero();
315
+ }
316
+ else if(m_length>BlockSize)
317
+ {
318
+ dst.setIdentity(rows(), rows());
319
+ if(m_reverse)
320
+ applyThisOnTheLeft(dst,workspace,true);
321
+ else
322
+ applyThisOnTheLeft(dst,workspace,true);
323
+ }
324
+ else
325
+ {
326
+ dst.setIdentity(rows(), rows());
327
+ for(Index k = vecs-1; k >= 0; --k)
328
+ {
329
+ Index cornerSize = rows() - k - m_shift;
330
+ if(m_reverse)
331
+ dst.bottomRightCorner(cornerSize, cornerSize)
332
+ .applyHouseholderOnTheRight(essentialVector(k), m_coeffs.coeff(k), workspace.data());
333
+ else
334
+ dst.bottomRightCorner(cornerSize, cornerSize)
335
+ .applyHouseholderOnTheLeft(essentialVector(k), m_coeffs.coeff(k), workspace.data());
336
+ }
337
+ }
338
+ }
339
+
340
+ /** \internal */
341
+ template<typename Dest> inline void applyThisOnTheRight(Dest& dst) const
342
+ {
343
+ Matrix<Scalar,1,Dest::RowsAtCompileTime,RowMajor,1,Dest::MaxRowsAtCompileTime> workspace(dst.rows());
344
+ applyThisOnTheRight(dst, workspace);
345
+ }
346
+
347
+ /** \internal */
348
+ template<typename Dest, typename Workspace>
349
+ inline void applyThisOnTheRight(Dest& dst, Workspace& workspace) const
350
+ {
351
+ workspace.resize(dst.rows());
352
+ for(Index k = 0; k < m_length; ++k)
353
+ {
354
+ Index actual_k = m_reverse ? m_length-k-1 : k;
355
+ dst.rightCols(rows()-m_shift-actual_k)
356
+ .applyHouseholderOnTheRight(essentialVector(actual_k), m_coeffs.coeff(actual_k), workspace.data());
357
+ }
358
+ }
359
+
360
+ /** \internal */
361
+ template<typename Dest> inline void applyThisOnTheLeft(Dest& dst, bool inputIsIdentity = false) const
362
+ {
363
+ Matrix<Scalar,1,Dest::ColsAtCompileTime,RowMajor,1,Dest::MaxColsAtCompileTime> workspace;
364
+ applyThisOnTheLeft(dst, workspace, inputIsIdentity);
365
+ }
366
+
367
+ /** \internal */
368
+ template<typename Dest, typename Workspace>
369
+ inline void applyThisOnTheLeft(Dest& dst, Workspace& workspace, bool inputIsIdentity = false) const
370
+ {
371
+ if(inputIsIdentity && m_reverse)
372
+ inputIsIdentity = false;
373
+ // if the entries are large enough, then apply the reflectors by block
374
+ if(m_length>=BlockSize && dst.cols()>1)
375
+ {
376
+ // Make sure we have at least 2 useful blocks, otherwise it is point-less:
377
+ Index blockSize = m_length<Index(2*BlockSize) ? (m_length+1)/2 : Index(BlockSize);
378
+ for(Index i = 0; i < m_length; i+=blockSize)
379
+ {
380
+ Index end = m_reverse ? (std::min)(m_length,i+blockSize) : m_length-i;
381
+ Index k = m_reverse ? i : (std::max)(Index(0),end-blockSize);
382
+ Index bs = end-k;
383
+ Index start = k + m_shift;
384
+
385
+ typedef Block<typename internal::remove_all<VectorsType>::type,Dynamic,Dynamic> SubVectorsType;
386
+ SubVectorsType sub_vecs1(m_vectors.const_cast_derived(), Side==OnTheRight ? k : start,
387
+ Side==OnTheRight ? start : k,
388
+ Side==OnTheRight ? bs : m_vectors.rows()-start,
389
+ Side==OnTheRight ? m_vectors.cols()-start : bs);
390
+ typename internal::conditional<Side==OnTheRight, Transpose<SubVectorsType>, SubVectorsType&>::type sub_vecs(sub_vecs1);
391
+
392
+ Index dstStart = dst.rows()-rows()+m_shift+k;
393
+ Index dstRows = rows()-m_shift-k;
394
+ Block<Dest,Dynamic,Dynamic> sub_dst(dst,
395
+ dstStart,
396
+ inputIsIdentity ? dstStart : 0,
397
+ dstRows,
398
+ inputIsIdentity ? dstRows : dst.cols());
399
+ apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse);
400
+ }
401
+ }
402
+ else
403
+ {
404
+ workspace.resize(dst.cols());
405
+ for(Index k = 0; k < m_length; ++k)
406
+ {
407
+ Index actual_k = m_reverse ? k : m_length-k-1;
408
+ Index dstStart = rows()-m_shift-actual_k;
409
+ dst.bottomRightCorner(dstStart, inputIsIdentity ? dstStart : dst.cols())
410
+ .applyHouseholderOnTheLeft(essentialVector(actual_k), m_coeffs.coeff(actual_k), workspace.data());
411
+ }
412
+ }
413
+ }
414
+
415
+ /** \brief Computes the product of a Householder sequence with a matrix.
416
+ * \param[in] other %Matrix being multiplied.
417
+ * \returns Expression object representing the product.
418
+ *
419
+ * This function computes \f$ HM \f$ where \f$ H \f$ is the Householder sequence represented by \p *this
420
+ * and \f$ M \f$ is the matrix \p other.
421
+ */
422
+ template<typename OtherDerived>
423
+ typename internal::matrix_type_times_scalar_type<Scalar, OtherDerived>::Type operator*(const MatrixBase<OtherDerived>& other) const
424
+ {
425
+ typename internal::matrix_type_times_scalar_type<Scalar, OtherDerived>::Type
426
+ res(other.template cast<typename internal::matrix_type_times_scalar_type<Scalar,OtherDerived>::ResultScalar>());
427
+ applyThisOnTheLeft(res, internal::is_identity<OtherDerived>::value && res.rows()==res.cols());
428
+ return res;
429
+ }
430
+
431
+ template<typename _VectorsType, typename _CoeffsType, int _Side> friend struct internal::hseq_side_dependent_impl;
432
+
433
+ /** \brief Sets the length of the Householder sequence.
434
+ * \param [in] length New value for the length.
435
+ *
436
+ * By default, the length \f$ n \f$ of the Householder sequence \f$ H = H_0 H_1 \ldots H_{n-1} \f$ is set
437
+ * to the number of columns of the matrix \p v passed to the constructor, or the number of rows if that
438
+ * is smaller. After this function is called, the length equals \p length.
439
+ *
440
+ * \sa length()
441
+ */
442
+ EIGEN_DEVICE_FUNC
443
+ HouseholderSequence& setLength(Index length)
444
+ {
445
+ m_length = length;
446
+ return *this;
447
+ }
448
+
449
+ /** \brief Sets the shift of the Householder sequence.
450
+ * \param [in] shift New value for the shift.
451
+ *
452
+ * By default, a %HouseholderSequence object represents \f$ H = H_0 H_1 \ldots H_{n-1} \f$ and the i-th
453
+ * column of the matrix \p v passed to the constructor corresponds to the i-th Householder
454
+ * reflection. After this function is called, the object represents \f$ H = H_{\mathrm{shift}}
455
+ * H_{\mathrm{shift}+1} \ldots H_{n-1} \f$ and the i-th column of \p v corresponds to the (shift+i)-th
456
+ * Householder reflection.
457
+ *
458
+ * \sa shift()
459
+ */
460
+ EIGEN_DEVICE_FUNC
461
+ HouseholderSequence& setShift(Index shift)
462
+ {
463
+ m_shift = shift;
464
+ return *this;
465
+ }
466
+
467
+ EIGEN_DEVICE_FUNC
468
+ Index length() const { return m_length; } /**< \brief Returns the length of the Householder sequence. */
469
+
470
+ EIGEN_DEVICE_FUNC
471
+ Index shift() const { return m_shift; } /**< \brief Returns the shift of the Householder sequence. */
472
+
473
+ /* Necessary for .adjoint() and .conjugate() */
474
+ template <typename VectorsType2, typename CoeffsType2, int Side2> friend class HouseholderSequence;
475
+
476
+ protected:
477
+
478
+ /** \internal
479
+ * \brief Sets the reverse flag.
480
+ * \param [in] reverse New value of the reverse flag.
481
+ *
482
+ * By default, the reverse flag is not set. If the reverse flag is set, then this object represents
483
+ * \f$ H^r = H_{n-1} \ldots H_1 H_0 \f$ instead of \f$ H = H_0 H_1 \ldots H_{n-1} \f$.
484
+ * \note For real valued HouseholderSequence this is equivalent to transposing \f$ H \f$.
485
+ *
486
+ * \sa reverseFlag(), transpose(), adjoint()
487
+ */
488
+ HouseholderSequence& setReverseFlag(bool reverse)
489
+ {
490
+ m_reverse = reverse;
491
+ return *this;
492
+ }
493
+
494
+ bool reverseFlag() const { return m_reverse; } /**< \internal \brief Returns the reverse flag. */
495
+
496
+ typename VectorsType::Nested m_vectors;
497
+ typename CoeffsType::Nested m_coeffs;
498
+ bool m_reverse;
499
+ Index m_length;
500
+ Index m_shift;
501
+ enum { BlockSize = 48 };
502
+ };
503
+
504
+ /** \brief Computes the product of a matrix with a Householder sequence.
505
+ * \param[in] other %Matrix being multiplied.
506
+ * \param[in] h %HouseholderSequence being multiplied.
507
+ * \returns Expression object representing the product.
508
+ *
509
+ * This function computes \f$ MH \f$ where \f$ M \f$ is the matrix \p other and \f$ H \f$ is the
510
+ * Householder sequence represented by \p h.
511
+ */
512
+ template<typename OtherDerived, typename VectorsType, typename CoeffsType, int Side>
513
+ typename internal::matrix_type_times_scalar_type<typename VectorsType::Scalar,OtherDerived>::Type operator*(const MatrixBase<OtherDerived>& other, const HouseholderSequence<VectorsType,CoeffsType,Side>& h)
514
+ {
515
+ typename internal::matrix_type_times_scalar_type<typename VectorsType::Scalar,OtherDerived>::Type
516
+ res(other.template cast<typename internal::matrix_type_times_scalar_type<typename VectorsType::Scalar,OtherDerived>::ResultScalar>());
517
+ h.applyThisOnTheRight(res);
518
+ return res;
519
+ }
520
+
521
+ /** \ingroup Householder_Module \householder_module
522
+ * \brief Convenience function for constructing a Householder sequence.
523
+ * \returns A HouseholderSequence constructed from the specified arguments.
524
+ */
525
+ template<typename VectorsType, typename CoeffsType>
526
+ HouseholderSequence<VectorsType,CoeffsType> householderSequence(const VectorsType& v, const CoeffsType& h)
527
+ {
528
+ return HouseholderSequence<VectorsType,CoeffsType,OnTheLeft>(v, h);
529
+ }
530
+
531
+ /** \ingroup Householder_Module \householder_module
532
+ * \brief Convenience function for constructing a Householder sequence.
533
+ * \returns A HouseholderSequence constructed from the specified arguments.
534
+ * \details This function differs from householderSequence() in that the template argument \p OnTheSide of
535
+ * the constructed HouseholderSequence is set to OnTheRight, instead of the default OnTheLeft.
536
+ */
537
+ template<typename VectorsType, typename CoeffsType>
538
+ HouseholderSequence<VectorsType,CoeffsType,OnTheRight> rightHouseholderSequence(const VectorsType& v, const CoeffsType& h)
539
+ {
540
+ return HouseholderSequence<VectorsType,CoeffsType,OnTheRight>(v, h);
541
+ }
542
+
543
+ } // end namespace Eigen
544
+
545
+ #endif // EIGEN_HOUSEHOLDER_SEQUENCE_H