umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,258 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2007-2009 Benoit Jacob <jacob.benoit.1@gmail.com>
5
+ // Copyright (C) 2009-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
6
+ //
7
+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
10
+
11
+ #ifndef EIGEN_DIAGONAL_H
12
+ #define EIGEN_DIAGONAL_H
13
+
14
+ namespace Eigen {
15
+
16
+ /** \class Diagonal
17
+ * \ingroup Core_Module
18
+ *
19
+ * \brief Expression of a diagonal/subdiagonal/superdiagonal in a matrix
20
+ *
21
+ * \param MatrixType the type of the object in which we are taking a sub/main/super diagonal
22
+ * \param DiagIndex the index of the sub/super diagonal. The default is 0 and it means the main diagonal.
23
+ * A positive value means a superdiagonal, a negative value means a subdiagonal.
24
+ * You can also use DynamicIndex so the index can be set at runtime.
25
+ *
26
+ * The matrix is not required to be square.
27
+ *
28
+ * This class represents an expression of the main diagonal, or any sub/super diagonal
29
+ * of a square matrix. It is the return type of MatrixBase::diagonal() and MatrixBase::diagonal(Index) and most of the
30
+ * time this is the only way it is used.
31
+ *
32
+ * \sa MatrixBase::diagonal(), MatrixBase::diagonal(Index)
33
+ */
34
+
35
+ namespace internal {
36
+ template<typename MatrixType, int DiagIndex>
37
+ struct traits<Diagonal<MatrixType,DiagIndex> >
38
+ : traits<MatrixType>
39
+ {
40
+ typedef typename ref_selector<MatrixType>::type MatrixTypeNested;
41
+ typedef typename remove_reference<MatrixTypeNested>::type _MatrixTypeNested;
42
+ typedef typename MatrixType::StorageKind StorageKind;
43
+ enum {
44
+ RowsAtCompileTime = (int(DiagIndex) == DynamicIndex || int(MatrixType::SizeAtCompileTime) == Dynamic) ? Dynamic
45
+ : (EIGEN_PLAIN_ENUM_MIN(MatrixType::RowsAtCompileTime - EIGEN_PLAIN_ENUM_MAX(-DiagIndex, 0),
46
+ MatrixType::ColsAtCompileTime - EIGEN_PLAIN_ENUM_MAX( DiagIndex, 0))),
47
+ ColsAtCompileTime = 1,
48
+ MaxRowsAtCompileTime = int(MatrixType::MaxSizeAtCompileTime) == Dynamic ? Dynamic
49
+ : DiagIndex == DynamicIndex ? EIGEN_SIZE_MIN_PREFER_FIXED(MatrixType::MaxRowsAtCompileTime,
50
+ MatrixType::MaxColsAtCompileTime)
51
+ : (EIGEN_PLAIN_ENUM_MIN(MatrixType::MaxRowsAtCompileTime - EIGEN_PLAIN_ENUM_MAX(-DiagIndex, 0),
52
+ MatrixType::MaxColsAtCompileTime - EIGEN_PLAIN_ENUM_MAX( DiagIndex, 0))),
53
+ MaxColsAtCompileTime = 1,
54
+ MaskLvalueBit = is_lvalue<MatrixType>::value ? LvalueBit : 0,
55
+ Flags = (unsigned int)_MatrixTypeNested::Flags & (RowMajorBit | MaskLvalueBit | DirectAccessBit) & ~RowMajorBit, // FIXME DirectAccessBit should not be handled by expressions
56
+ MatrixTypeOuterStride = outer_stride_at_compile_time<MatrixType>::ret,
57
+ InnerStrideAtCompileTime = MatrixTypeOuterStride == Dynamic ? Dynamic : MatrixTypeOuterStride+1,
58
+ OuterStrideAtCompileTime = 0
59
+ };
60
+ };
61
+ }
62
+
63
+ template<typename MatrixType, int _DiagIndex> class Diagonal
64
+ : public internal::dense_xpr_base< Diagonal<MatrixType,_DiagIndex> >::type
65
+ {
66
+ public:
67
+
68
+ enum { DiagIndex = _DiagIndex };
69
+ typedef typename internal::dense_xpr_base<Diagonal>::type Base;
70
+ EIGEN_DENSE_PUBLIC_INTERFACE(Diagonal)
71
+
72
+ EIGEN_DEVICE_FUNC
73
+ explicit inline Diagonal(MatrixType& matrix, Index a_index = DiagIndex) : m_matrix(matrix), m_index(a_index)
74
+ {
75
+ eigen_assert( a_index <= m_matrix.cols() && -a_index <= m_matrix.rows() );
76
+ }
77
+
78
+ EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Diagonal)
79
+
80
+ EIGEN_DEVICE_FUNC
81
+ inline Index rows() const
82
+ {
83
+ return m_index.value()<0 ? numext::mini<Index>(m_matrix.cols(),m_matrix.rows()+m_index.value())
84
+ : numext::mini<Index>(m_matrix.rows(),m_matrix.cols()-m_index.value());
85
+ }
86
+
87
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
88
+ inline Index cols() const EIGEN_NOEXCEPT { return 1; }
89
+
90
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
91
+ inline Index innerStride() const EIGEN_NOEXCEPT {
92
+ return m_matrix.outerStride() + 1;
93
+ }
94
+
95
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
96
+ inline Index outerStride() const EIGEN_NOEXCEPT { return 0; }
97
+
98
+ typedef typename internal::conditional<
99
+ internal::is_lvalue<MatrixType>::value,
100
+ Scalar,
101
+ const Scalar
102
+ >::type ScalarWithConstIfNotLvalue;
103
+
104
+ EIGEN_DEVICE_FUNC
105
+ inline ScalarWithConstIfNotLvalue* data() { return &(m_matrix.coeffRef(rowOffset(), colOffset())); }
106
+ EIGEN_DEVICE_FUNC
107
+ inline const Scalar* data() const { return &(m_matrix.coeffRef(rowOffset(), colOffset())); }
108
+
109
+ EIGEN_DEVICE_FUNC
110
+ inline Scalar& coeffRef(Index row, Index)
111
+ {
112
+ EIGEN_STATIC_ASSERT_LVALUE(MatrixType)
113
+ return m_matrix.coeffRef(row+rowOffset(), row+colOffset());
114
+ }
115
+
116
+ EIGEN_DEVICE_FUNC
117
+ inline const Scalar& coeffRef(Index row, Index) const
118
+ {
119
+ return m_matrix.coeffRef(row+rowOffset(), row+colOffset());
120
+ }
121
+
122
+ EIGEN_DEVICE_FUNC
123
+ inline CoeffReturnType coeff(Index row, Index) const
124
+ {
125
+ return m_matrix.coeff(row+rowOffset(), row+colOffset());
126
+ }
127
+
128
+ EIGEN_DEVICE_FUNC
129
+ inline Scalar& coeffRef(Index idx)
130
+ {
131
+ EIGEN_STATIC_ASSERT_LVALUE(MatrixType)
132
+ return m_matrix.coeffRef(idx+rowOffset(), idx+colOffset());
133
+ }
134
+
135
+ EIGEN_DEVICE_FUNC
136
+ inline const Scalar& coeffRef(Index idx) const
137
+ {
138
+ return m_matrix.coeffRef(idx+rowOffset(), idx+colOffset());
139
+ }
140
+
141
+ EIGEN_DEVICE_FUNC
142
+ inline CoeffReturnType coeff(Index idx) const
143
+ {
144
+ return m_matrix.coeff(idx+rowOffset(), idx+colOffset());
145
+ }
146
+
147
+ EIGEN_DEVICE_FUNC
148
+ inline const typename internal::remove_all<typename MatrixType::Nested>::type&
149
+ nestedExpression() const
150
+ {
151
+ return m_matrix;
152
+ }
153
+
154
+ EIGEN_DEVICE_FUNC
155
+ inline Index index() const
156
+ {
157
+ return m_index.value();
158
+ }
159
+
160
+ protected:
161
+ typename internal::ref_selector<MatrixType>::non_const_type m_matrix;
162
+ const internal::variable_if_dynamicindex<Index, DiagIndex> m_index;
163
+
164
+ private:
165
+ // some compilers may fail to optimize std::max etc in case of compile-time constants...
166
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE EIGEN_CONSTEXPR
167
+ Index absDiagIndex() const EIGEN_NOEXCEPT { return m_index.value()>0 ? m_index.value() : -m_index.value(); }
168
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE EIGEN_CONSTEXPR
169
+ Index rowOffset() const EIGEN_NOEXCEPT { return m_index.value()>0 ? 0 : -m_index.value(); }
170
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE EIGEN_CONSTEXPR
171
+ Index colOffset() const EIGEN_NOEXCEPT { return m_index.value()>0 ? m_index.value() : 0; }
172
+ // trigger a compile-time error if someone try to call packet
173
+ template<int LoadMode> typename MatrixType::PacketReturnType packet(Index) const;
174
+ template<int LoadMode> typename MatrixType::PacketReturnType packet(Index,Index) const;
175
+ };
176
+
177
+ /** \returns an expression of the main diagonal of the matrix \c *this
178
+ *
179
+ * \c *this is not required to be square.
180
+ *
181
+ * Example: \include MatrixBase_diagonal.cpp
182
+ * Output: \verbinclude MatrixBase_diagonal.out
183
+ *
184
+ * \sa class Diagonal */
185
+ template<typename Derived>
186
+ EIGEN_DEVICE_FUNC inline typename MatrixBase<Derived>::DiagonalReturnType
187
+ MatrixBase<Derived>::diagonal()
188
+ {
189
+ return DiagonalReturnType(derived());
190
+ }
191
+
192
+ /** This is the const version of diagonal(). */
193
+ template<typename Derived>
194
+ EIGEN_DEVICE_FUNC inline typename MatrixBase<Derived>::ConstDiagonalReturnType
195
+ MatrixBase<Derived>::diagonal() const
196
+ {
197
+ return ConstDiagonalReturnType(derived());
198
+ }
199
+
200
+ /** \returns an expression of the \a DiagIndex-th sub or super diagonal of the matrix \c *this
201
+ *
202
+ * \c *this is not required to be square.
203
+ *
204
+ * The template parameter \a DiagIndex represent a super diagonal if \a DiagIndex > 0
205
+ * and a sub diagonal otherwise. \a DiagIndex == 0 is equivalent to the main diagonal.
206
+ *
207
+ * Example: \include MatrixBase_diagonal_int.cpp
208
+ * Output: \verbinclude MatrixBase_diagonal_int.out
209
+ *
210
+ * \sa MatrixBase::diagonal(), class Diagonal */
211
+ template<typename Derived>
212
+ EIGEN_DEVICE_FUNC inline typename MatrixBase<Derived>::DiagonalDynamicIndexReturnType
213
+ MatrixBase<Derived>::diagonal(Index index)
214
+ {
215
+ return DiagonalDynamicIndexReturnType(derived(), index);
216
+ }
217
+
218
+ /** This is the const version of diagonal(Index). */
219
+ template<typename Derived>
220
+ EIGEN_DEVICE_FUNC inline typename MatrixBase<Derived>::ConstDiagonalDynamicIndexReturnType
221
+ MatrixBase<Derived>::diagonal(Index index) const
222
+ {
223
+ return ConstDiagonalDynamicIndexReturnType(derived(), index);
224
+ }
225
+
226
+ /** \returns an expression of the \a DiagIndex-th sub or super diagonal of the matrix \c *this
227
+ *
228
+ * \c *this is not required to be square.
229
+ *
230
+ * The template parameter \a DiagIndex represent a super diagonal if \a DiagIndex > 0
231
+ * and a sub diagonal otherwise. \a DiagIndex == 0 is equivalent to the main diagonal.
232
+ *
233
+ * Example: \include MatrixBase_diagonal_template_int.cpp
234
+ * Output: \verbinclude MatrixBase_diagonal_template_int.out
235
+ *
236
+ * \sa MatrixBase::diagonal(), class Diagonal */
237
+ template<typename Derived>
238
+ template<int Index_>
239
+ EIGEN_DEVICE_FUNC
240
+ inline typename MatrixBase<Derived>::template DiagonalIndexReturnType<Index_>::Type
241
+ MatrixBase<Derived>::diagonal()
242
+ {
243
+ return typename DiagonalIndexReturnType<Index_>::Type(derived());
244
+ }
245
+
246
+ /** This is the const version of diagonal<int>(). */
247
+ template<typename Derived>
248
+ template<int Index_>
249
+ EIGEN_DEVICE_FUNC
250
+ inline typename MatrixBase<Derived>::template ConstDiagonalIndexReturnType<Index_>::Type
251
+ MatrixBase<Derived>::diagonal() const
252
+ {
253
+ return typename ConstDiagonalIndexReturnType<Index_>::Type(derived());
254
+ }
255
+
256
+ } // end namespace Eigen
257
+
258
+ #endif // EIGEN_DIAGONAL_H
@@ -0,0 +1,391 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ // Copyright (C) 2007-2009 Benoit Jacob <jacob.benoit.1@gmail.com>
6
+ //
7
+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
10
+
11
+ #ifndef EIGEN_DIAGONALMATRIX_H
12
+ #define EIGEN_DIAGONALMATRIX_H
13
+
14
+ namespace Eigen {
15
+
16
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
17
+ template<typename Derived>
18
+ class DiagonalBase : public EigenBase<Derived>
19
+ {
20
+ public:
21
+ typedef typename internal::traits<Derived>::DiagonalVectorType DiagonalVectorType;
22
+ typedef typename DiagonalVectorType::Scalar Scalar;
23
+ typedef typename DiagonalVectorType::RealScalar RealScalar;
24
+ typedef typename internal::traits<Derived>::StorageKind StorageKind;
25
+ typedef typename internal::traits<Derived>::StorageIndex StorageIndex;
26
+
27
+ enum {
28
+ RowsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
29
+ ColsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
30
+ MaxRowsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
31
+ MaxColsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
32
+ IsVectorAtCompileTime = 0,
33
+ Flags = NoPreferredStorageOrderBit
34
+ };
35
+
36
+ typedef Matrix<Scalar, RowsAtCompileTime, ColsAtCompileTime, 0, MaxRowsAtCompileTime, MaxColsAtCompileTime> DenseMatrixType;
37
+ typedef DenseMatrixType DenseType;
38
+ typedef DiagonalMatrix<Scalar,DiagonalVectorType::SizeAtCompileTime,DiagonalVectorType::MaxSizeAtCompileTime> PlainObject;
39
+
40
+ EIGEN_DEVICE_FUNC
41
+ inline const Derived& derived() const { return *static_cast<const Derived*>(this); }
42
+ EIGEN_DEVICE_FUNC
43
+ inline Derived& derived() { return *static_cast<Derived*>(this); }
44
+
45
+ EIGEN_DEVICE_FUNC
46
+ DenseMatrixType toDenseMatrix() const { return derived(); }
47
+
48
+ EIGEN_DEVICE_FUNC
49
+ inline const DiagonalVectorType& diagonal() const { return derived().diagonal(); }
50
+ EIGEN_DEVICE_FUNC
51
+ inline DiagonalVectorType& diagonal() { return derived().diagonal(); }
52
+
53
+ EIGEN_DEVICE_FUNC
54
+ inline Index rows() const { return diagonal().size(); }
55
+ EIGEN_DEVICE_FUNC
56
+ inline Index cols() const { return diagonal().size(); }
57
+
58
+ template<typename MatrixDerived>
59
+ EIGEN_DEVICE_FUNC
60
+ const Product<Derived,MatrixDerived,LazyProduct>
61
+ operator*(const MatrixBase<MatrixDerived> &matrix) const
62
+ {
63
+ return Product<Derived, MatrixDerived, LazyProduct>(derived(),matrix.derived());
64
+ }
65
+
66
+ typedef DiagonalWrapper<const CwiseUnaryOp<internal::scalar_inverse_op<Scalar>, const DiagonalVectorType> > InverseReturnType;
67
+ EIGEN_DEVICE_FUNC
68
+ inline const InverseReturnType
69
+ inverse() const
70
+ {
71
+ return InverseReturnType(diagonal().cwiseInverse());
72
+ }
73
+
74
+ EIGEN_DEVICE_FUNC
75
+ inline const DiagonalWrapper<const EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(DiagonalVectorType,Scalar,product) >
76
+ operator*(const Scalar& scalar) const
77
+ {
78
+ return DiagonalWrapper<const EIGEN_EXPR_BINARYOP_SCALAR_RETURN_TYPE(DiagonalVectorType,Scalar,product) >(diagonal() * scalar);
79
+ }
80
+ EIGEN_DEVICE_FUNC
81
+ friend inline const DiagonalWrapper<const EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(Scalar,DiagonalVectorType,product) >
82
+ operator*(const Scalar& scalar, const DiagonalBase& other)
83
+ {
84
+ return DiagonalWrapper<const EIGEN_SCALAR_BINARYOP_EXPR_RETURN_TYPE(Scalar,DiagonalVectorType,product) >(scalar * other.diagonal());
85
+ }
86
+
87
+ template<typename OtherDerived>
88
+ EIGEN_DEVICE_FUNC
89
+ #ifdef EIGEN_PARSED_BY_DOXYGEN
90
+ inline unspecified_expression_type
91
+ #else
92
+ inline const DiagonalWrapper<const EIGEN_CWISE_BINARY_RETURN_TYPE(DiagonalVectorType,typename OtherDerived::DiagonalVectorType,sum) >
93
+ #endif
94
+ operator+(const DiagonalBase<OtherDerived>& other) const
95
+ {
96
+ return (diagonal() + other.diagonal()).asDiagonal();
97
+ }
98
+
99
+ template<typename OtherDerived>
100
+ EIGEN_DEVICE_FUNC
101
+ #ifdef EIGEN_PARSED_BY_DOXYGEN
102
+ inline unspecified_expression_type
103
+ #else
104
+ inline const DiagonalWrapper<const EIGEN_CWISE_BINARY_RETURN_TYPE(DiagonalVectorType,typename OtherDerived::DiagonalVectorType,difference) >
105
+ #endif
106
+ operator-(const DiagonalBase<OtherDerived>& other) const
107
+ {
108
+ return (diagonal() - other.diagonal()).asDiagonal();
109
+ }
110
+ };
111
+
112
+ #endif
113
+
114
+ /** \class DiagonalMatrix
115
+ * \ingroup Core_Module
116
+ *
117
+ * \brief Represents a diagonal matrix with its storage
118
+ *
119
+ * \param _Scalar the type of coefficients
120
+ * \param SizeAtCompileTime the dimension of the matrix, or Dynamic
121
+ * \param MaxSizeAtCompileTime the dimension of the matrix, or Dynamic. This parameter is optional and defaults
122
+ * to SizeAtCompileTime. Most of the time, you do not need to specify it.
123
+ *
124
+ * \sa class DiagonalWrapper
125
+ */
126
+
127
+ namespace internal {
128
+ template<typename _Scalar, int SizeAtCompileTime, int MaxSizeAtCompileTime>
129
+ struct traits<DiagonalMatrix<_Scalar,SizeAtCompileTime,MaxSizeAtCompileTime> >
130
+ : traits<Matrix<_Scalar,SizeAtCompileTime,SizeAtCompileTime,0,MaxSizeAtCompileTime,MaxSizeAtCompileTime> >
131
+ {
132
+ typedef Matrix<_Scalar,SizeAtCompileTime,1,0,MaxSizeAtCompileTime,1> DiagonalVectorType;
133
+ typedef DiagonalShape StorageKind;
134
+ enum {
135
+ Flags = LvalueBit | NoPreferredStorageOrderBit
136
+ };
137
+ };
138
+ }
139
+ template<typename _Scalar, int SizeAtCompileTime, int MaxSizeAtCompileTime>
140
+ class DiagonalMatrix
141
+ : public DiagonalBase<DiagonalMatrix<_Scalar,SizeAtCompileTime,MaxSizeAtCompileTime> >
142
+ {
143
+ public:
144
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
145
+ typedef typename internal::traits<DiagonalMatrix>::DiagonalVectorType DiagonalVectorType;
146
+ typedef const DiagonalMatrix& Nested;
147
+ typedef _Scalar Scalar;
148
+ typedef typename internal::traits<DiagonalMatrix>::StorageKind StorageKind;
149
+ typedef typename internal::traits<DiagonalMatrix>::StorageIndex StorageIndex;
150
+ #endif
151
+
152
+ protected:
153
+
154
+ DiagonalVectorType m_diagonal;
155
+
156
+ public:
157
+
158
+ /** const version of diagonal(). */
159
+ EIGEN_DEVICE_FUNC
160
+ inline const DiagonalVectorType& diagonal() const { return m_diagonal; }
161
+ /** \returns a reference to the stored vector of diagonal coefficients. */
162
+ EIGEN_DEVICE_FUNC
163
+ inline DiagonalVectorType& diagonal() { return m_diagonal; }
164
+
165
+ /** Default constructor without initialization */
166
+ EIGEN_DEVICE_FUNC
167
+ inline DiagonalMatrix() {}
168
+
169
+ /** Constructs a diagonal matrix with given dimension */
170
+ EIGEN_DEVICE_FUNC
171
+ explicit inline DiagonalMatrix(Index dim) : m_diagonal(dim) {}
172
+
173
+ /** 2D constructor. */
174
+ EIGEN_DEVICE_FUNC
175
+ inline DiagonalMatrix(const Scalar& x, const Scalar& y) : m_diagonal(x,y) {}
176
+
177
+ /** 3D constructor. */
178
+ EIGEN_DEVICE_FUNC
179
+ inline DiagonalMatrix(const Scalar& x, const Scalar& y, const Scalar& z) : m_diagonal(x,y,z) {}
180
+
181
+ #if EIGEN_HAS_CXX11
182
+ /** \brief Construct a diagonal matrix with fixed size from an arbitrary number of coefficients. \cpp11
183
+ *
184
+ * There exists C++98 anologue constructors for fixed-size diagonal matrices having 2 or 3 coefficients.
185
+ *
186
+ * \warning To construct a diagonal matrix of fixed size, the number of values passed to this
187
+ * constructor must match the fixed dimension of \c *this.
188
+ *
189
+ * \sa DiagonalMatrix(const Scalar&, const Scalar&)
190
+ * \sa DiagonalMatrix(const Scalar&, const Scalar&, const Scalar&)
191
+ */
192
+ template <typename... ArgTypes>
193
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
194
+ DiagonalMatrix(const Scalar& a0, const Scalar& a1, const Scalar& a2, const ArgTypes&... args)
195
+ : m_diagonal(a0, a1, a2, args...) {}
196
+
197
+ /** \brief Constructs a DiagonalMatrix and initializes it by elements given by an initializer list of initializer
198
+ * lists \cpp11
199
+ */
200
+ EIGEN_DEVICE_FUNC
201
+ explicit EIGEN_STRONG_INLINE DiagonalMatrix(const std::initializer_list<std::initializer_list<Scalar>>& list)
202
+ : m_diagonal(list) {}
203
+ #endif // EIGEN_HAS_CXX11
204
+
205
+ /** Copy constructor. */
206
+ template<typename OtherDerived>
207
+ EIGEN_DEVICE_FUNC
208
+ inline DiagonalMatrix(const DiagonalBase<OtherDerived>& other) : m_diagonal(other.diagonal()) {}
209
+
210
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
211
+ /** copy constructor. prevent a default copy constructor from hiding the other templated constructor */
212
+ inline DiagonalMatrix(const DiagonalMatrix& other) : m_diagonal(other.diagonal()) {}
213
+ #endif
214
+
215
+ /** generic constructor from expression of the diagonal coefficients */
216
+ template<typename OtherDerived>
217
+ EIGEN_DEVICE_FUNC
218
+ explicit inline DiagonalMatrix(const MatrixBase<OtherDerived>& other) : m_diagonal(other)
219
+ {}
220
+
221
+ /** Copy operator. */
222
+ template<typename OtherDerived>
223
+ EIGEN_DEVICE_FUNC
224
+ DiagonalMatrix& operator=(const DiagonalBase<OtherDerived>& other)
225
+ {
226
+ m_diagonal = other.diagonal();
227
+ return *this;
228
+ }
229
+
230
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
231
+ /** This is a special case of the templated operator=. Its purpose is to
232
+ * prevent a default operator= from hiding the templated operator=.
233
+ */
234
+ EIGEN_DEVICE_FUNC
235
+ DiagonalMatrix& operator=(const DiagonalMatrix& other)
236
+ {
237
+ m_diagonal = other.diagonal();
238
+ return *this;
239
+ }
240
+ #endif
241
+
242
+ /** Resizes to given size. */
243
+ EIGEN_DEVICE_FUNC
244
+ inline void resize(Index size) { m_diagonal.resize(size); }
245
+ /** Sets all coefficients to zero. */
246
+ EIGEN_DEVICE_FUNC
247
+ inline void setZero() { m_diagonal.setZero(); }
248
+ /** Resizes and sets all coefficients to zero. */
249
+ EIGEN_DEVICE_FUNC
250
+ inline void setZero(Index size) { m_diagonal.setZero(size); }
251
+ /** Sets this matrix to be the identity matrix of the current size. */
252
+ EIGEN_DEVICE_FUNC
253
+ inline void setIdentity() { m_diagonal.setOnes(); }
254
+ /** Sets this matrix to be the identity matrix of the given size. */
255
+ EIGEN_DEVICE_FUNC
256
+ inline void setIdentity(Index size) { m_diagonal.setOnes(size); }
257
+ };
258
+
259
+ /** \class DiagonalWrapper
260
+ * \ingroup Core_Module
261
+ *
262
+ * \brief Expression of a diagonal matrix
263
+ *
264
+ * \param _DiagonalVectorType the type of the vector of diagonal coefficients
265
+ *
266
+ * This class is an expression of a diagonal matrix, but not storing its own vector of diagonal coefficients,
267
+ * instead wrapping an existing vector expression. It is the return type of MatrixBase::asDiagonal()
268
+ * and most of the time this is the only way that it is used.
269
+ *
270
+ * \sa class DiagonalMatrix, class DiagonalBase, MatrixBase::asDiagonal()
271
+ */
272
+
273
+ namespace internal {
274
+ template<typename _DiagonalVectorType>
275
+ struct traits<DiagonalWrapper<_DiagonalVectorType> >
276
+ {
277
+ typedef _DiagonalVectorType DiagonalVectorType;
278
+ typedef typename DiagonalVectorType::Scalar Scalar;
279
+ typedef typename DiagonalVectorType::StorageIndex StorageIndex;
280
+ typedef DiagonalShape StorageKind;
281
+ typedef typename traits<DiagonalVectorType>::XprKind XprKind;
282
+ enum {
283
+ RowsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
284
+ ColsAtCompileTime = DiagonalVectorType::SizeAtCompileTime,
285
+ MaxRowsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
286
+ MaxColsAtCompileTime = DiagonalVectorType::MaxSizeAtCompileTime,
287
+ Flags = (traits<DiagonalVectorType>::Flags & LvalueBit) | NoPreferredStorageOrderBit
288
+ };
289
+ };
290
+ }
291
+
292
+ template<typename _DiagonalVectorType>
293
+ class DiagonalWrapper
294
+ : public DiagonalBase<DiagonalWrapper<_DiagonalVectorType> >, internal::no_assignment_operator
295
+ {
296
+ public:
297
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
298
+ typedef _DiagonalVectorType DiagonalVectorType;
299
+ typedef DiagonalWrapper Nested;
300
+ #endif
301
+
302
+ /** Constructor from expression of diagonal coefficients to wrap. */
303
+ EIGEN_DEVICE_FUNC
304
+ explicit inline DiagonalWrapper(DiagonalVectorType& a_diagonal) : m_diagonal(a_diagonal) {}
305
+
306
+ /** \returns a const reference to the wrapped expression of diagonal coefficients. */
307
+ EIGEN_DEVICE_FUNC
308
+ const DiagonalVectorType& diagonal() const { return m_diagonal; }
309
+
310
+ protected:
311
+ typename DiagonalVectorType::Nested m_diagonal;
312
+ };
313
+
314
+ /** \returns a pseudo-expression of a diagonal matrix with *this as vector of diagonal coefficients
315
+ *
316
+ * \only_for_vectors
317
+ *
318
+ * Example: \include MatrixBase_asDiagonal.cpp
319
+ * Output: \verbinclude MatrixBase_asDiagonal.out
320
+ *
321
+ * \sa class DiagonalWrapper, class DiagonalMatrix, diagonal(), isDiagonal()
322
+ **/
323
+ template<typename Derived>
324
+ EIGEN_DEVICE_FUNC inline const DiagonalWrapper<const Derived>
325
+ MatrixBase<Derived>::asDiagonal() const
326
+ {
327
+ return DiagonalWrapper<const Derived>(derived());
328
+ }
329
+
330
+ /** \returns true if *this is approximately equal to a diagonal matrix,
331
+ * within the precision given by \a prec.
332
+ *
333
+ * Example: \include MatrixBase_isDiagonal.cpp
334
+ * Output: \verbinclude MatrixBase_isDiagonal.out
335
+ *
336
+ * \sa asDiagonal()
337
+ */
338
+ template<typename Derived>
339
+ bool MatrixBase<Derived>::isDiagonal(const RealScalar& prec) const
340
+ {
341
+ if(cols() != rows()) return false;
342
+ RealScalar maxAbsOnDiagonal = static_cast<RealScalar>(-1);
343
+ for(Index j = 0; j < cols(); ++j)
344
+ {
345
+ RealScalar absOnDiagonal = numext::abs(coeff(j,j));
346
+ if(absOnDiagonal > maxAbsOnDiagonal) maxAbsOnDiagonal = absOnDiagonal;
347
+ }
348
+ for(Index j = 0; j < cols(); ++j)
349
+ for(Index i = 0; i < j; ++i)
350
+ {
351
+ if(!internal::isMuchSmallerThan(coeff(i, j), maxAbsOnDiagonal, prec)) return false;
352
+ if(!internal::isMuchSmallerThan(coeff(j, i), maxAbsOnDiagonal, prec)) return false;
353
+ }
354
+ return true;
355
+ }
356
+
357
+ namespace internal {
358
+
359
+ template<> struct storage_kind_to_shape<DiagonalShape> { typedef DiagonalShape Shape; };
360
+
361
+ struct Diagonal2Dense {};
362
+
363
+ template<> struct AssignmentKind<DenseShape,DiagonalShape> { typedef Diagonal2Dense Kind; };
364
+
365
+ // Diagonal matrix to Dense assignment
366
+ template< typename DstXprType, typename SrcXprType, typename Functor>
367
+ struct Assignment<DstXprType, SrcXprType, Functor, Diagonal2Dense>
368
+ {
369
+ static void run(DstXprType &dst, const SrcXprType &src, const internal::assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
370
+ {
371
+ Index dstRows = src.rows();
372
+ Index dstCols = src.cols();
373
+ if((dst.rows()!=dstRows) || (dst.cols()!=dstCols))
374
+ dst.resize(dstRows, dstCols);
375
+
376
+ dst.setZero();
377
+ dst.diagonal() = src.diagonal();
378
+ }
379
+
380
+ static void run(DstXprType &dst, const SrcXprType &src, const internal::add_assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
381
+ { dst.diagonal() += src.diagonal(); }
382
+
383
+ static void run(DstXprType &dst, const SrcXprType &src, const internal::sub_assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &/*func*/)
384
+ { dst.diagonal() -= src.diagonal(); }
385
+ };
386
+
387
+ } // namespace internal
388
+
389
+ } // end namespace Eigen
390
+
391
+ #endif // EIGEN_DIAGONALMATRIX_H
@@ -0,0 +1,28 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ // Copyright (C) 2007-2009 Benoit Jacob <jacob.benoit.1@gmail.com>
6
+ //
7
+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
10
+
11
+ #ifndef EIGEN_DIAGONALPRODUCT_H
12
+ #define EIGEN_DIAGONALPRODUCT_H
13
+
14
+ namespace Eigen {
15
+
16
+ /** \returns the diagonal matrix product of \c *this by the diagonal matrix \a diagonal.
17
+ */
18
+ template<typename Derived>
19
+ template<typename DiagonalDerived>
20
+ EIGEN_DEVICE_FUNC inline const Product<Derived, DiagonalDerived, LazyProduct>
21
+ MatrixBase<Derived>::operator*(const DiagonalBase<DiagonalDerived> &a_diagonal) const
22
+ {
23
+ return Product<Derived, DiagonalDerived, LazyProduct>(derived(),a_diagonal.derived());
24
+ }
25
+
26
+ } // end namespace Eigen
27
+
28
+ #endif // EIGEN_DIAGONALPRODUCT_H