umappp 0.1.2
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- checksums.yaml +7 -0
- data/LICENSE.txt +25 -0
- data/README.md +110 -0
- data/ext/umappp/extconf.rb +25 -0
- data/ext/umappp/numo.hpp +867 -0
- data/ext/umappp/umappp.cpp +225 -0
- data/lib/umappp/version.rb +5 -0
- data/lib/umappp.rb +41 -0
- data/vendor/Eigen/Cholesky +45 -0
- data/vendor/Eigen/CholmodSupport +48 -0
- data/vendor/Eigen/Core +384 -0
- data/vendor/Eigen/Dense +7 -0
- data/vendor/Eigen/Eigen +2 -0
- data/vendor/Eigen/Eigenvalues +60 -0
- data/vendor/Eigen/Geometry +59 -0
- data/vendor/Eigen/Householder +29 -0
- data/vendor/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/Eigen/Jacobi +32 -0
- data/vendor/Eigen/KLUSupport +41 -0
- data/vendor/Eigen/LU +47 -0
- data/vendor/Eigen/MetisSupport +35 -0
- data/vendor/Eigen/OrderingMethods +70 -0
- data/vendor/Eigen/PaStiXSupport +49 -0
- data/vendor/Eigen/PardisoSupport +35 -0
- data/vendor/Eigen/QR +50 -0
- data/vendor/Eigen/QtAlignedMalloc +39 -0
- data/vendor/Eigen/SPQRSupport +34 -0
- data/vendor/Eigen/SVD +50 -0
- data/vendor/Eigen/Sparse +34 -0
- data/vendor/Eigen/SparseCholesky +37 -0
- data/vendor/Eigen/SparseCore +69 -0
- data/vendor/Eigen/SparseLU +50 -0
- data/vendor/Eigen/SparseQR +36 -0
- data/vendor/Eigen/StdDeque +27 -0
- data/vendor/Eigen/StdList +26 -0
- data/vendor/Eigen/StdVector +27 -0
- data/vendor/Eigen/SuperLUSupport +64 -0
- data/vendor/Eigen/UmfPackSupport +40 -0
- data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
- data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
- data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
- data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/Eigen/src/Core/Array.h +417 -0
- data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/Eigen/src/Core/Assign.h +90 -0
- data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
- data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/Eigen/src/Core/Block.h +448 -0
- data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
- data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
- data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
- data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
- data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
- data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
- data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
- data/vendor/Eigen/src/Core/DenseBase.h +701 -0
- data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
- data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
- data/vendor/Eigen/src/Core/Diagonal.h +258 -0
- data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
- data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/Eigen/src/Core/Dot.h +318 -0
- data/vendor/Eigen/src/Core/EigenBase.h +160 -0
- data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
- data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
- data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
- data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
- data/vendor/Eigen/src/Core/IO.h +258 -0
- data/vendor/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/Eigen/src/Core/Inverse.h +117 -0
- data/vendor/Eigen/src/Core/Map.h +171 -0
- data/vendor/Eigen/src/Core/MapBase.h +310 -0
- data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
- data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
- data/vendor/Eigen/src/Core/Matrix.h +565 -0
- data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
- data/vendor/Eigen/src/Core/NestByValue.h +85 -0
- data/vendor/Eigen/src/Core/NoAlias.h +109 -0
- data/vendor/Eigen/src/Core/NumTraits.h +335 -0
- data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
- data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
- data/vendor/Eigen/src/Core/Product.h +191 -0
- data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
- data/vendor/Eigen/src/Core/Random.h +218 -0
- data/vendor/Eigen/src/Core/Redux.h +515 -0
- data/vendor/Eigen/src/Core/Ref.h +381 -0
- data/vendor/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
- data/vendor/Eigen/src/Core/Reverse.h +217 -0
- data/vendor/Eigen/src/Core/Select.h +164 -0
- data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
- data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/Eigen/src/Core/Solve.h +188 -0
- data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/Eigen/src/Core/SolverBase.h +168 -0
- data/vendor/Eigen/src/Core/StableNorm.h +251 -0
- data/vendor/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/Eigen/src/Core/Stride.h +116 -0
- data/vendor/Eigen/src/Core/Swap.h +68 -0
- data/vendor/Eigen/src/Core/Transpose.h +464 -0
- data/vendor/Eigen/src/Core/Transpositions.h +386 -0
- data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
- data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
- data/vendor/Eigen/src/Core/Visitor.h +381 -0
- data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
- data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
- data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
- data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
- data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
- data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
- data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
- data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
- data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
- data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
- data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
- data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
- data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
- data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
- data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
- data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
- data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
- data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
- data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
- data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
- data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
- data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
- data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
- data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
- data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
- data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
- data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/Eigen/src/Core/util/Constants.h +563 -0
- data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
- data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
- data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
- data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
- data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
- data/vendor/Eigen/src/Core/util/Meta.h +812 -0
- data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
- data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
- data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
- data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
- data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
- data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
- data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
- data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
- data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
- data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
- data/vendor/Eigen/src/Geometry/Translation.h +202 -0
- data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
- data/vendor/Eigen/src/Householder/Householder.h +176 -0
- data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
- data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
- data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/Eigen/src/LU/Determinant.h +117 -0
- data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
- data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
- data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
- data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
- data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
- data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
- data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
- data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
- data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
- data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
- data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
- data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
- data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
- data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
- data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
- data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
- data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
- data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
- data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
- data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
- data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
- data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
- data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
- data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
- data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
- data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
- data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
- data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
- data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
- data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
- data/vendor/Eigen/src/misc/Image.h +82 -0
- data/vendor/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/Eigen/src/misc/blas.h +440 -0
- data/vendor/Eigen/src/misc/lapack.h +152 -0
- data/vendor/Eigen/src/misc/lapacke.h +16292 -0
- data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
- data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
- data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
- data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
- data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/aarand/aarand.hpp +114 -0
- data/vendor/annoy/annoylib.h +1495 -0
- data/vendor/annoy/kissrandom.h +120 -0
- data/vendor/annoy/mman.h +242 -0
- data/vendor/hnswlib/bruteforce.h +152 -0
- data/vendor/hnswlib/hnswalg.h +1192 -0
- data/vendor/hnswlib/hnswlib.h +108 -0
- data/vendor/hnswlib/space_ip.h +282 -0
- data/vendor/hnswlib/space_l2.h +281 -0
- data/vendor/hnswlib/visited_list_pool.h +79 -0
- data/vendor/irlba/irlba.hpp +575 -0
- data/vendor/irlba/lanczos.hpp +212 -0
- data/vendor/irlba/parallel.hpp +474 -0
- data/vendor/irlba/utils.hpp +224 -0
- data/vendor/irlba/wrappers.hpp +228 -0
- data/vendor/kmeans/Base.hpp +75 -0
- data/vendor/kmeans/Details.hpp +79 -0
- data/vendor/kmeans/HartiganWong.hpp +492 -0
- data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
- data/vendor/kmeans/InitializeNone.hpp +44 -0
- data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
- data/vendor/kmeans/InitializeRandom.hpp +91 -0
- data/vendor/kmeans/Kmeans.hpp +161 -0
- data/vendor/kmeans/Lloyd.hpp +134 -0
- data/vendor/kmeans/MiniBatch.hpp +269 -0
- data/vendor/kmeans/QuickSearch.hpp +179 -0
- data/vendor/kmeans/compute_centroids.hpp +32 -0
- data/vendor/kmeans/compute_wcss.hpp +27 -0
- data/vendor/kmeans/is_edge_case.hpp +42 -0
- data/vendor/kmeans/random.hpp +55 -0
- data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
- data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
- data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
- data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
- data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
- data/vendor/knncolle/knncolle.hpp +34 -0
- data/vendor/knncolle/utils/Base.hpp +100 -0
- data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
- data/vendor/knncolle/utils/distances.hpp +98 -0
- data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
- data/vendor/powerit/PowerIterations.hpp +157 -0
- data/vendor/umappp/NeighborList.hpp +37 -0
- data/vendor/umappp/Umap.hpp +662 -0
- data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
- data/vendor/umappp/find_ab.hpp +157 -0
- data/vendor/umappp/neighbor_similarities.hpp +136 -0
- data/vendor/umappp/optimize_layout.hpp +285 -0
- data/vendor/umappp/spectral_init.hpp +181 -0
- data/vendor/umappp/umappp.hpp +13 -0
- metadata +465 -0
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/***************************************************************************
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* Copyright (C) 2017 Codeplay Software Limited
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* This Source Code Form is subject to the terms of the Mozilla
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* Public License v. 2.0. If a copy of the MPL was not distributed
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* with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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*
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*
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* SyclMemoryModel.h
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*
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* Description:
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* Interface for SYCL buffers to behave as a non-dereferenceable pointer
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* Interface for Placeholder accessor to behave as a pointer on both host
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* and device
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*
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* Authors:
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*
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* Ruyman Reyes Codeplay Software Ltd.
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* Mehdi Goli Codeplay Software Ltd.
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* Vanya Yaneva Codeplay Software Ltd.
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*
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**************************************************************************/
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#if defined(EIGEN_USE_SYCL) && \
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!defined(EIGEN_CXX11_TENSOR_TENSOR_SYCL_STORAGE_MEMORY_H)
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#define EIGEN_CXX11_TENSOR_TENSOR_SYCL_STORAGE_MEMORY_H
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#include <CL/sycl.hpp>
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#ifdef EIGEN_EXCEPTIONS
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#include <stdexcept>
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#endif
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#include <cstddef>
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#include <queue>
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#include <set>
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#include <unordered_map>
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namespace Eigen {
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namespace TensorSycl {
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namespace internal {
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using sycl_acc_target = cl::sycl::access::target;
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using sycl_acc_mode = cl::sycl::access::mode;
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/**
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* Default values for template arguments
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*/
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using buffer_data_type_t = uint8_t;
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const sycl_acc_target default_acc_target = sycl_acc_target::global_buffer;
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const sycl_acc_mode default_acc_mode = sycl_acc_mode::read_write;
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/**
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* PointerMapper
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* Associates fake pointers with buffers.
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*
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*/
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class PointerMapper {
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public:
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using base_ptr_t = std::intptr_t;
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/* Structure of a virtual pointer
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*
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* |================================================|
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* | POINTER ADDRESS |
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* |================================================|
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*/
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struct virtual_pointer_t {
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/* Type for the pointers
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*/
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base_ptr_t m_contents;
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/** Conversions from virtual_pointer_t to
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* void * should just reinterpret_cast the integer number
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*/
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operator void *() const { return reinterpret_cast<void *>(m_contents); }
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/**
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* Convert back to the integer number.
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*/
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operator base_ptr_t() const { return m_contents; }
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/**
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* Add a certain value to the pointer to create a
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* new pointer to that offset
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*/
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virtual_pointer_t operator+(size_t off) { return m_contents + off; }
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/* Numerical order for sorting pointers in containers. */
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bool operator<(virtual_pointer_t rhs) const {
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return (static_cast<base_ptr_t>(m_contents) <
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static_cast<base_ptr_t>(rhs.m_contents));
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}
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bool operator>(virtual_pointer_t rhs) const {
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return (static_cast<base_ptr_t>(m_contents) >
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static_cast<base_ptr_t>(rhs.m_contents));
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}
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/**
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* Numerical order for sorting pointers in containers
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*/
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bool operator==(virtual_pointer_t rhs) const {
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return (static_cast<base_ptr_t>(m_contents) ==
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static_cast<base_ptr_t>(rhs.m_contents));
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}
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/**
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* Simple forward to the equality overload.
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*/
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bool operator!=(virtual_pointer_t rhs) const {
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return !(this->operator==(rhs));
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}
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/**
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* Converts a void * into a virtual pointer structure.
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* Note that this will only work if the void * was
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* already a virtual_pointer_t, but we have no way of
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* checking
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*/
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virtual_pointer_t(const void *ptr)
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: m_contents(reinterpret_cast<base_ptr_t>(ptr)){};
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/**
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* Creates a virtual_pointer_t from the given integer
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* number
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*/
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virtual_pointer_t(base_ptr_t u) : m_contents(u){};
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};
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/* Definition of a null pointer
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*/
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const virtual_pointer_t null_virtual_ptr = nullptr;
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/**
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* Whether if a pointer is null or not.
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* A pointer is nullptr if the value is of null_virtual_ptr
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*/
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static inline bool is_nullptr(virtual_pointer_t ptr) {
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return (static_cast<void *>(ptr) == nullptr);
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}
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/* basic type for all buffers
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*/
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using buffer_t = cl::sycl::buffer_mem;
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/**
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* Node that stores information about a device allocation.
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* Nodes are sorted by size to organise a free list of nodes
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* that can be recovered.
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*/
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struct pMapNode_t {
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buffer_t m_buffer;
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size_t m_size;
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bool m_free;
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pMapNode_t(buffer_t b, size_t size, bool f)
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: m_buffer{b}, m_size{size}, m_free{f} {
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m_buffer.set_final_data(nullptr);
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}
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bool operator<=(const pMapNode_t &rhs) { return (m_size <= rhs.m_size); }
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};
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/** Storage of the pointer / buffer tree
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*/
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using pointerMap_t = std::map<virtual_pointer_t, pMapNode_t>;
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/**
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* Obtain the insertion point in the pointer map for
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* a pointer of the given size.
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* \param requiredSize Size attemted to reclaim
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*/
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typename pointerMap_t::iterator get_insertion_point(size_t requiredSize) {
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typename pointerMap_t::iterator retVal;
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bool reuse = false;
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if (!m_freeList.empty()) {
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// try to re-use an existing block
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for (auto freeElem : m_freeList) {
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if (freeElem->second.m_size >= requiredSize) {
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retVal = freeElem;
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reuse = true;
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// Element is not going to be free anymore
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m_freeList.erase(freeElem);
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break;
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}
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}
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}
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if (!reuse) {
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retVal = std::prev(m_pointerMap.end());
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}
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return retVal;
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}
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/**
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* Returns an iterator to the node that stores the information
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* of the given virtual pointer from the given pointer map structure.
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* If pointer is not found, throws std::out_of_range.
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* If the pointer map structure is empty, throws std::out_of_range
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*
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* \param pMap the pointerMap_t structure storing all the pointers
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* \param virtual_pointer_ptr The virtual pointer to obtain the node of
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* \throws std::out:of_range if the pointer is not found or pMap is empty
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*/
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typename pointerMap_t::iterator get_node(const virtual_pointer_t ptr) {
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if (this->count() == 0) {
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m_pointerMap.clear();
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EIGEN_THROW_X(std::out_of_range("There are no pointers allocated\n"));
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}
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if (is_nullptr(ptr)) {
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m_pointerMap.clear();
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EIGEN_THROW_X(std::out_of_range("Cannot access null pointer\n"));
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}
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// The previous element to the lower bound is the node that
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// holds this memory address
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auto node = m_pointerMap.lower_bound(ptr);
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// If the value of the pointer is not the one of the node
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// then we return the previous one
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if (node == std::end(m_pointerMap)) {
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--node;
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} else if (node->first != ptr) {
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if (node == std::begin(m_pointerMap)) {
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m_pointerMap.clear();
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EIGEN_THROW_X(
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std::out_of_range("The pointer is not registered in the map\n"));
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}
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--node;
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}
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return node;
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}
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/* get_buffer.
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* Returns a buffer from the map using the pointer address
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*/
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template <typename buffer_data_type = buffer_data_type_t>
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cl::sycl::buffer<buffer_data_type, 1> get_buffer(
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const virtual_pointer_t ptr) {
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using sycl_buffer_t = cl::sycl::buffer<buffer_data_type, 1>;
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// get_node() returns a `buffer_mem`, so we need to cast it to a `buffer<>`.
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// We can do this without the `buffer_mem` being a pointer, as we
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// only declare member variables in the base class (`buffer_mem`) and not in
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// the child class (`buffer<>).
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auto node = get_node(ptr);
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eigen_assert(node->first == ptr || node->first < ptr);
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eigen_assert(ptr < static_cast<virtual_pointer_t>(node->second.m_size +
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node->first));
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return *(static_cast<sycl_buffer_t *>(&node->second.m_buffer));
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}
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/**
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* @brief Returns an accessor to the buffer of the given virtual pointer
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* @param accessMode
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* @param accessTarget
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* @param ptr The virtual pointer
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*/
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template <sycl_acc_mode access_mode = default_acc_mode,
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sycl_acc_target access_target = default_acc_target,
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typename buffer_data_type = buffer_data_type_t>
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cl::sycl::accessor<buffer_data_type, 1, access_mode, access_target>
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get_access(const virtual_pointer_t ptr) {
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auto buf = get_buffer<buffer_data_type>(ptr);
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return buf.template get_access<access_mode, access_target>();
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}
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/**
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* @brief Returns an accessor to the buffer of the given virtual pointer
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* in the given command group scope
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* @param accessMode
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* @param accessTarget
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* @param ptr The virtual pointer
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* @param cgh Reference to the command group scope
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*/
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template <sycl_acc_mode access_mode = default_acc_mode,
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sycl_acc_target access_target = default_acc_target,
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typename buffer_data_type = buffer_data_type_t>
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cl::sycl::accessor<buffer_data_type, 1, access_mode, access_target>
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get_access(const virtual_pointer_t ptr, cl::sycl::handler &cgh) {
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auto buf = get_buffer<buffer_data_type>(ptr);
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return buf.template get_access<access_mode, access_target>(cgh);
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}
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/*
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* Returns the offset from the base address of this pointer.
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*/
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inline std::ptrdiff_t get_offset(const virtual_pointer_t ptr) {
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// The previous element to the lower bound is the node that
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// holds this memory address
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auto node = get_node(ptr);
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auto start = node->first;
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eigen_assert(start == ptr || start < ptr);
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eigen_assert(ptr < start + node->second.m_size);
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return (ptr - start);
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}
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/*
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* Returns the number of elements by which the given pointer is offset from
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* the base address.
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*/
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template <typename buffer_data_type>
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inline size_t get_element_offset(const virtual_pointer_t ptr) {
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return get_offset(ptr) / sizeof(buffer_data_type);
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}
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/**
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* Constructs the PointerMapper structure.
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*/
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PointerMapper(base_ptr_t baseAddress = 4096)
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|
+
: m_pointerMap{}, m_freeList{}, m_baseAddress{baseAddress} {
|
310
|
+
if (m_baseAddress == 0) {
|
311
|
+
EIGEN_THROW_X(std::invalid_argument("Base address cannot be zero\n"));
|
312
|
+
}
|
313
|
+
};
|
314
|
+
|
315
|
+
/**
|
316
|
+
* PointerMapper cannot be copied or moved
|
317
|
+
*/
|
318
|
+
PointerMapper(const PointerMapper &) = delete;
|
319
|
+
|
320
|
+
/**
|
321
|
+
* Empty the pointer list
|
322
|
+
*/
|
323
|
+
inline void clear() {
|
324
|
+
m_freeList.clear();
|
325
|
+
m_pointerMap.clear();
|
326
|
+
}
|
327
|
+
|
328
|
+
/* add_pointer.
|
329
|
+
* Adds an existing pointer to the map and returns the virtual pointer id.
|
330
|
+
*/
|
331
|
+
inline virtual_pointer_t add_pointer(const buffer_t &b) {
|
332
|
+
return add_pointer_impl(b);
|
333
|
+
}
|
334
|
+
|
335
|
+
/* add_pointer.
|
336
|
+
* Adds a pointer to the map and returns the virtual pointer id.
|
337
|
+
*/
|
338
|
+
inline virtual_pointer_t add_pointer(buffer_t &&b) {
|
339
|
+
return add_pointer_impl(b);
|
340
|
+
}
|
341
|
+
|
342
|
+
/**
|
343
|
+
* @brief Fuses the given node with the previous nodes in the
|
344
|
+
* pointer map if they are free
|
345
|
+
*
|
346
|
+
* @param node A reference to the free node to be fused
|
347
|
+
*/
|
348
|
+
void fuse_forward(typename pointerMap_t::iterator &node) {
|
349
|
+
while (node != std::prev(m_pointerMap.end())) {
|
350
|
+
// if following node is free
|
351
|
+
// remove it and extend the current node with its size
|
352
|
+
auto fwd_node = std::next(node);
|
353
|
+
if (!fwd_node->second.m_free) {
|
354
|
+
break;
|
355
|
+
}
|
356
|
+
auto fwd_size = fwd_node->second.m_size;
|
357
|
+
m_freeList.erase(fwd_node);
|
358
|
+
m_pointerMap.erase(fwd_node);
|
359
|
+
|
360
|
+
node->second.m_size += fwd_size;
|
361
|
+
}
|
362
|
+
}
|
363
|
+
|
364
|
+
/**
|
365
|
+
* @brief Fuses the given node with the following nodes in the
|
366
|
+
* pointer map if they are free
|
367
|
+
*
|
368
|
+
* @param node A reference to the free node to be fused
|
369
|
+
*/
|
370
|
+
void fuse_backward(typename pointerMap_t::iterator &node) {
|
371
|
+
while (node != m_pointerMap.begin()) {
|
372
|
+
// if previous node is free, extend it
|
373
|
+
// with the size of the current one
|
374
|
+
auto prev_node = std::prev(node);
|
375
|
+
if (!prev_node->second.m_free) {
|
376
|
+
break;
|
377
|
+
}
|
378
|
+
prev_node->second.m_size += node->second.m_size;
|
379
|
+
|
380
|
+
// remove the current node
|
381
|
+
m_freeList.erase(node);
|
382
|
+
m_pointerMap.erase(node);
|
383
|
+
|
384
|
+
// point to the previous node
|
385
|
+
node = prev_node;
|
386
|
+
}
|
387
|
+
}
|
388
|
+
|
389
|
+
/* remove_pointer.
|
390
|
+
* Removes the given pointer from the map.
|
391
|
+
* The pointer is allowed to be reused only if ReUse if true.
|
392
|
+
*/
|
393
|
+
template <bool ReUse = true>
|
394
|
+
void remove_pointer(const virtual_pointer_t ptr) {
|
395
|
+
if (is_nullptr(ptr)) {
|
396
|
+
return;
|
397
|
+
}
|
398
|
+
auto node = this->get_node(ptr);
|
399
|
+
|
400
|
+
node->second.m_free = true;
|
401
|
+
m_freeList.emplace(node);
|
402
|
+
|
403
|
+
// Fuse the node
|
404
|
+
// with free nodes before and after it
|
405
|
+
fuse_forward(node);
|
406
|
+
fuse_backward(node);
|
407
|
+
|
408
|
+
// If after fusing the node is the last one
|
409
|
+
// simply remove it (since it is free)
|
410
|
+
if (node == std::prev(m_pointerMap.end())) {
|
411
|
+
m_freeList.erase(node);
|
412
|
+
m_pointerMap.erase(node);
|
413
|
+
}
|
414
|
+
}
|
415
|
+
|
416
|
+
/* count.
|
417
|
+
* Return the number of active pointers (i.e, pointers that
|
418
|
+
* have been malloc but not freed).
|
419
|
+
*/
|
420
|
+
size_t count() const { return (m_pointerMap.size() - m_freeList.size()); }
|
421
|
+
|
422
|
+
private:
|
423
|
+
/* add_pointer_impl.
|
424
|
+
* Adds a pointer to the map and returns the virtual pointer id.
|
425
|
+
* BufferT is either a const buffer_t& or a buffer_t&&.
|
426
|
+
*/
|
427
|
+
template <class BufferT>
|
428
|
+
virtual_pointer_t add_pointer_impl(BufferT b) {
|
429
|
+
virtual_pointer_t retVal = nullptr;
|
430
|
+
size_t bufSize = b.get_count();
|
431
|
+
pMapNode_t p{b, bufSize, false};
|
432
|
+
// If this is the first pointer:
|
433
|
+
if (m_pointerMap.empty()) {
|
434
|
+
virtual_pointer_t initialVal{m_baseAddress};
|
435
|
+
m_pointerMap.emplace(initialVal, p);
|
436
|
+
return initialVal;
|
437
|
+
}
|
438
|
+
|
439
|
+
auto lastElemIter = get_insertion_point(bufSize);
|
440
|
+
// We are recovering an existing free node
|
441
|
+
if (lastElemIter->second.m_free) {
|
442
|
+
lastElemIter->second.m_buffer = b;
|
443
|
+
lastElemIter->second.m_free = false;
|
444
|
+
|
445
|
+
// If the recovered node is bigger than the inserted one
|
446
|
+
// add a new free node with the remaining space
|
447
|
+
if (lastElemIter->second.m_size > bufSize) {
|
448
|
+
// create a new node with the remaining space
|
449
|
+
auto remainingSize = lastElemIter->second.m_size - bufSize;
|
450
|
+
pMapNode_t p2{b, remainingSize, true};
|
451
|
+
|
452
|
+
// update size of the current node
|
453
|
+
lastElemIter->second.m_size = bufSize;
|
454
|
+
|
455
|
+
// add the new free node
|
456
|
+
auto newFreePtr = lastElemIter->first + bufSize;
|
457
|
+
auto freeNode = m_pointerMap.emplace(newFreePtr, p2).first;
|
458
|
+
m_freeList.emplace(freeNode);
|
459
|
+
}
|
460
|
+
|
461
|
+
retVal = lastElemIter->first;
|
462
|
+
} else {
|
463
|
+
size_t lastSize = lastElemIter->second.m_size;
|
464
|
+
retVal = lastElemIter->first + lastSize;
|
465
|
+
m_pointerMap.emplace(retVal, p);
|
466
|
+
}
|
467
|
+
return retVal;
|
468
|
+
}
|
469
|
+
|
470
|
+
/**
|
471
|
+
* Compare two iterators to pointer map entries according to
|
472
|
+
* the size of the allocation on the device.
|
473
|
+
*/
|
474
|
+
struct SortBySize {
|
475
|
+
bool operator()(typename pointerMap_t::iterator a,
|
476
|
+
typename pointerMap_t::iterator b) const {
|
477
|
+
return ((a->first < b->first) && (a->second <= b->second)) ||
|
478
|
+
((a->first < b->first) && (b->second <= a->second));
|
479
|
+
}
|
480
|
+
};
|
481
|
+
|
482
|
+
/* Maps the pointer addresses to buffer and size pairs.
|
483
|
+
*/
|
484
|
+
pointerMap_t m_pointerMap;
|
485
|
+
|
486
|
+
/* List of free nodes available for re-using
|
487
|
+
*/
|
488
|
+
std::set<typename pointerMap_t::iterator, SortBySize> m_freeList;
|
489
|
+
|
490
|
+
/* Base address used when issuing the first virtual pointer, allows users
|
491
|
+
* to specify alignment. Cannot be zero. */
|
492
|
+
std::intptr_t m_baseAddress;
|
493
|
+
};
|
494
|
+
|
495
|
+
/* remove_pointer.
|
496
|
+
* Removes the given pointer from the map.
|
497
|
+
* The pointer is allowed to be reused only if ReUse if true.
|
498
|
+
*/
|
499
|
+
template <>
|
500
|
+
inline void PointerMapper::remove_pointer<false>(const virtual_pointer_t ptr) {
|
501
|
+
if (is_nullptr(ptr)) {
|
502
|
+
return;
|
503
|
+
}
|
504
|
+
m_pointerMap.erase(this->get_node(ptr));
|
505
|
+
}
|
506
|
+
|
507
|
+
/**
|
508
|
+
* Malloc-like interface to the pointer-mapper.
|
509
|
+
* Given a size, creates a byte-typed buffer and returns a
|
510
|
+
* fake pointer to keep track of it.
|
511
|
+
* \param size Size in bytes of the desired allocation
|
512
|
+
* \throw cl::sycl::exception if error while creating the buffer
|
513
|
+
*/
|
514
|
+
inline void *SYCLmalloc(size_t size, PointerMapper &pMap) {
|
515
|
+
if (size == 0) {
|
516
|
+
return nullptr;
|
517
|
+
}
|
518
|
+
// Create a generic buffer of the given size
|
519
|
+
using buffer_t = cl::sycl::buffer<buffer_data_type_t, 1>;
|
520
|
+
auto thePointer = pMap.add_pointer(buffer_t(cl::sycl::range<1>{size}));
|
521
|
+
// Store the buffer on the global list
|
522
|
+
return static_cast<void *>(thePointer);
|
523
|
+
}
|
524
|
+
|
525
|
+
/**
|
526
|
+
* Free-like interface to the pointer mapper.
|
527
|
+
* Given a fake-pointer created with the virtual-pointer malloc,
|
528
|
+
* destroys the buffer and remove it from the list.
|
529
|
+
* If ReUse is false, the pointer is not added to the freeList,
|
530
|
+
* it should be false only for sub-buffers.
|
531
|
+
*/
|
532
|
+
template <bool ReUse = true, typename PointerMapper>
|
533
|
+
inline void SYCLfree(void *ptr, PointerMapper &pMap) {
|
534
|
+
pMap.template remove_pointer<ReUse>(ptr);
|
535
|
+
}
|
536
|
+
|
537
|
+
/**
|
538
|
+
* Clear all the memory allocated by SYCL.
|
539
|
+
*/
|
540
|
+
template <typename PointerMapper>
|
541
|
+
inline void SYCLfreeAll(PointerMapper &pMap) {
|
542
|
+
pMap.clear();
|
543
|
+
}
|
544
|
+
|
545
|
+
template <cl::sycl::access::mode AcMd, typename T>
|
546
|
+
struct RangeAccess {
|
547
|
+
static const auto global_access = cl::sycl::access::target::global_buffer;
|
548
|
+
static const auto is_place_holder = cl::sycl::access::placeholder::true_t;
|
549
|
+
typedef T scalar_t;
|
550
|
+
typedef scalar_t &ref_t;
|
551
|
+
typedef typename cl::sycl::global_ptr<scalar_t>::pointer_t ptr_t;
|
552
|
+
|
553
|
+
// the accessor type does not necessarily the same as T
|
554
|
+
typedef cl::sycl::accessor<scalar_t, 1, AcMd, global_access, is_place_holder>
|
555
|
+
accessor;
|
556
|
+
|
557
|
+
typedef RangeAccess<AcMd, T> self_t;
|
558
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE RangeAccess(accessor access,
|
559
|
+
size_t offset,
|
560
|
+
std::intptr_t virtual_ptr)
|
561
|
+
: access_(access), offset_(offset), virtual_ptr_(virtual_ptr) {}
|
562
|
+
|
563
|
+
RangeAccess(cl::sycl::buffer<scalar_t, 1> buff =
|
564
|
+
cl::sycl::buffer<scalar_t, 1>(cl::sycl::range<1>(1)))
|
565
|
+
: access_{accessor{buff}}, offset_(0), virtual_ptr_(-1) {}
|
566
|
+
|
567
|
+
// This should be only used for null constructor on the host side
|
568
|
+
RangeAccess(std::nullptr_t) : RangeAccess() {}
|
569
|
+
// This template parameter must be removed and scalar_t should be replaced
|
570
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ptr_t get_pointer() const {
|
571
|
+
return (access_.get_pointer().get() + offset_);
|
572
|
+
}
|
573
|
+
template <typename Index>
|
574
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE self_t &operator+=(Index offset) {
|
575
|
+
offset_ += (offset);
|
576
|
+
return *this;
|
577
|
+
}
|
578
|
+
template <typename Index>
|
579
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE self_t operator+(Index offset) const {
|
580
|
+
return self_t(access_, offset_ + offset, virtual_ptr_);
|
581
|
+
}
|
582
|
+
template <typename Index>
|
583
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE self_t operator-(Index offset) const {
|
584
|
+
return self_t(access_, offset_ - offset, virtual_ptr_);
|
585
|
+
}
|
586
|
+
template <typename Index>
|
587
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE self_t &operator-=(Index offset) {
|
588
|
+
offset_ -= offset;
|
589
|
+
return *this;
|
590
|
+
}
|
591
|
+
|
592
|
+
// THIS IS FOR NULL COMPARISON ONLY
|
593
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE friend bool operator==(
|
594
|
+
const RangeAccess &lhs, std::nullptr_t) {
|
595
|
+
return ((lhs.virtual_ptr_ == -1));
|
596
|
+
}
|
597
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE friend bool operator!=(
|
598
|
+
const RangeAccess &lhs, std::nullptr_t i) {
|
599
|
+
return !(lhs == i);
|
600
|
+
}
|
601
|
+
|
602
|
+
// THIS IS FOR NULL COMPARISON ONLY
|
603
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE friend bool operator==(
|
604
|
+
std::nullptr_t, const RangeAccess &rhs) {
|
605
|
+
return ((rhs.virtual_ptr_ == -1));
|
606
|
+
}
|
607
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE friend bool operator!=(
|
608
|
+
std::nullptr_t i, const RangeAccess &rhs) {
|
609
|
+
return !(i == rhs);
|
610
|
+
}
|
611
|
+
// Prefix operator (Increment and return value)
|
612
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE self_t &operator++() {
|
613
|
+
offset_++;
|
614
|
+
return (*this);
|
615
|
+
}
|
616
|
+
|
617
|
+
// Postfix operator (Return value and increment)
|
618
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE self_t operator++(int i) {
|
619
|
+
EIGEN_UNUSED_VARIABLE(i);
|
620
|
+
self_t temp_iterator(*this);
|
621
|
+
offset_++;
|
622
|
+
return temp_iterator;
|
623
|
+
}
|
624
|
+
|
625
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t get_size() const {
|
626
|
+
return (access_.get_count() - offset_);
|
627
|
+
}
|
628
|
+
|
629
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t get_offset() const {
|
630
|
+
return offset_;
|
631
|
+
}
|
632
|
+
|
633
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void set_offset(std::ptrdiff_t offset) {
|
634
|
+
offset_ = offset;
|
635
|
+
}
|
636
|
+
|
637
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ref_t operator*() const {
|
638
|
+
return *get_pointer();
|
639
|
+
}
|
640
|
+
|
641
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ref_t operator*() {
|
642
|
+
return *get_pointer();
|
643
|
+
}
|
644
|
+
|
645
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ptr_t operator->() = delete;
|
646
|
+
|
647
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ref_t operator[](int x) {
|
648
|
+
return *(get_pointer() + x);
|
649
|
+
}
|
650
|
+
|
651
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ref_t operator[](int x) const {
|
652
|
+
return *(get_pointer() + x);
|
653
|
+
}
|
654
|
+
|
655
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE scalar_t *get_virtual_pointer() const {
|
656
|
+
return reinterpret_cast<scalar_t *>(virtual_ptr_ +
|
657
|
+
(offset_ * sizeof(scalar_t)));
|
658
|
+
}
|
659
|
+
|
660
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE explicit operator bool() const {
|
661
|
+
return (virtual_ptr_ != -1);
|
662
|
+
}
|
663
|
+
|
664
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE operator RangeAccess<AcMd, const T>() {
|
665
|
+
return RangeAccess<AcMd, const T>(access_, offset_, virtual_ptr_);
|
666
|
+
}
|
667
|
+
|
668
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
|
669
|
+
operator RangeAccess<AcMd, const T>() const {
|
670
|
+
return RangeAccess<AcMd, const T>(access_, offset_, virtual_ptr_);
|
671
|
+
}
|
672
|
+
// binding placeholder accessors to a command group handler for SYCL
|
673
|
+
EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void bind(
|
674
|
+
cl::sycl::handler &cgh) const {
|
675
|
+
cgh.require(access_);
|
676
|
+
}
|
677
|
+
|
678
|
+
private:
|
679
|
+
accessor access_;
|
680
|
+
size_t offset_;
|
681
|
+
std::intptr_t virtual_ptr_; // the location of the buffer in the map
|
682
|
+
};
|
683
|
+
|
684
|
+
template <cl::sycl::access::mode AcMd, typename T>
|
685
|
+
struct RangeAccess<AcMd, const T> : RangeAccess<AcMd, T> {
|
686
|
+
typedef RangeAccess<AcMd, T> Base;
|
687
|
+
using Base::Base;
|
688
|
+
};
|
689
|
+
|
690
|
+
} // namespace internal
|
691
|
+
} // namespace TensorSycl
|
692
|
+
} // namespace Eigen
|
693
|
+
|
694
|
+
#endif // EIGEN_CXX11_TENSOR_TENSOR_SYCL_STORAGE_MEMORY_H
|