umappp 0.1.2

Sign up to get free protection for your applications and to get access to all the features.
Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,571 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_SPARSE_BLOCK_H
11
+ #define EIGEN_SPARSE_BLOCK_H
12
+
13
+ namespace Eigen {
14
+
15
+ // Subset of columns or rows
16
+ template<typename XprType, int BlockRows, int BlockCols>
17
+ class BlockImpl<XprType,BlockRows,BlockCols,true,Sparse>
18
+ : public SparseMatrixBase<Block<XprType,BlockRows,BlockCols,true> >
19
+ {
20
+ typedef typename internal::remove_all<typename XprType::Nested>::type _MatrixTypeNested;
21
+ typedef Block<XprType, BlockRows, BlockCols, true> BlockType;
22
+ public:
23
+ enum { IsRowMajor = internal::traits<BlockType>::IsRowMajor };
24
+ protected:
25
+ enum { OuterSize = IsRowMajor ? BlockRows : BlockCols };
26
+ typedef SparseMatrixBase<BlockType> Base;
27
+ using Base::convert_index;
28
+ public:
29
+ EIGEN_SPARSE_PUBLIC_INTERFACE(BlockType)
30
+
31
+ inline BlockImpl(XprType& xpr, Index i)
32
+ : m_matrix(xpr), m_outerStart(convert_index(i)), m_outerSize(OuterSize)
33
+ {}
34
+
35
+ inline BlockImpl(XprType& xpr, Index startRow, Index startCol, Index blockRows, Index blockCols)
36
+ : m_matrix(xpr), m_outerStart(convert_index(IsRowMajor ? startRow : startCol)), m_outerSize(convert_index(IsRowMajor ? blockRows : blockCols))
37
+ {}
38
+
39
+ EIGEN_STRONG_INLINE Index rows() const { return IsRowMajor ? m_outerSize.value() : m_matrix.rows(); }
40
+ EIGEN_STRONG_INLINE Index cols() const { return IsRowMajor ? m_matrix.cols() : m_outerSize.value(); }
41
+
42
+ Index nonZeros() const
43
+ {
44
+ typedef internal::evaluator<XprType> EvaluatorType;
45
+ EvaluatorType matEval(m_matrix);
46
+ Index nnz = 0;
47
+ Index end = m_outerStart + m_outerSize.value();
48
+ for(Index j=m_outerStart; j<end; ++j)
49
+ for(typename EvaluatorType::InnerIterator it(matEval, j); it; ++it)
50
+ ++nnz;
51
+ return nnz;
52
+ }
53
+
54
+ inline const Scalar coeff(Index row, Index col) const
55
+ {
56
+ return m_matrix.coeff(row + (IsRowMajor ? m_outerStart : 0), col + (IsRowMajor ? 0 : m_outerStart));
57
+ }
58
+
59
+ inline const Scalar coeff(Index index) const
60
+ {
61
+ return m_matrix.coeff(IsRowMajor ? m_outerStart : index, IsRowMajor ? index : m_outerStart);
62
+ }
63
+
64
+ inline const XprType& nestedExpression() const { return m_matrix; }
65
+ inline XprType& nestedExpression() { return m_matrix; }
66
+ Index startRow() const { return IsRowMajor ? m_outerStart : 0; }
67
+ Index startCol() const { return IsRowMajor ? 0 : m_outerStart; }
68
+ Index blockRows() const { return IsRowMajor ? m_outerSize.value() : m_matrix.rows(); }
69
+ Index blockCols() const { return IsRowMajor ? m_matrix.cols() : m_outerSize.value(); }
70
+
71
+ protected:
72
+
73
+ typename internal::ref_selector<XprType>::non_const_type m_matrix;
74
+ Index m_outerStart;
75
+ const internal::variable_if_dynamic<Index, OuterSize> m_outerSize;
76
+
77
+ protected:
78
+ // Disable assignment with clear error message.
79
+ // Note that simply removing operator= yields compilation errors with ICC+MSVC
80
+ template<typename T>
81
+ BlockImpl& operator=(const T&)
82
+ {
83
+ EIGEN_STATIC_ASSERT(sizeof(T)==0, THIS_SPARSE_BLOCK_SUBEXPRESSION_IS_READ_ONLY);
84
+ return *this;
85
+ }
86
+ };
87
+
88
+
89
+ /***************************************************************************
90
+ * specialization for SparseMatrix
91
+ ***************************************************************************/
92
+
93
+ namespace internal {
94
+
95
+ template<typename SparseMatrixType, int BlockRows, int BlockCols>
96
+ class sparse_matrix_block_impl
97
+ : public SparseCompressedBase<Block<SparseMatrixType,BlockRows,BlockCols,true> >
98
+ {
99
+ typedef typename internal::remove_all<typename SparseMatrixType::Nested>::type _MatrixTypeNested;
100
+ typedef Block<SparseMatrixType, BlockRows, BlockCols, true> BlockType;
101
+ typedef SparseCompressedBase<Block<SparseMatrixType,BlockRows,BlockCols,true> > Base;
102
+ using Base::convert_index;
103
+ public:
104
+ enum { IsRowMajor = internal::traits<BlockType>::IsRowMajor };
105
+ EIGEN_SPARSE_PUBLIC_INTERFACE(BlockType)
106
+ protected:
107
+ typedef typename Base::IndexVector IndexVector;
108
+ enum { OuterSize = IsRowMajor ? BlockRows : BlockCols };
109
+ public:
110
+
111
+ inline sparse_matrix_block_impl(SparseMatrixType& xpr, Index i)
112
+ : m_matrix(xpr), m_outerStart(convert_index(i)), m_outerSize(OuterSize)
113
+ {}
114
+
115
+ inline sparse_matrix_block_impl(SparseMatrixType& xpr, Index startRow, Index startCol, Index blockRows, Index blockCols)
116
+ : m_matrix(xpr), m_outerStart(convert_index(IsRowMajor ? startRow : startCol)), m_outerSize(convert_index(IsRowMajor ? blockRows : blockCols))
117
+ {}
118
+
119
+ template<typename OtherDerived>
120
+ inline BlockType& operator=(const SparseMatrixBase<OtherDerived>& other)
121
+ {
122
+ typedef typename internal::remove_all<typename SparseMatrixType::Nested>::type _NestedMatrixType;
123
+ _NestedMatrixType& matrix = m_matrix;
124
+ // This assignment is slow if this vector set is not empty
125
+ // and/or it is not at the end of the nonzeros of the underlying matrix.
126
+
127
+ // 1 - eval to a temporary to avoid transposition and/or aliasing issues
128
+ Ref<const SparseMatrix<Scalar, IsRowMajor ? RowMajor : ColMajor, StorageIndex> > tmp(other.derived());
129
+ eigen_internal_assert(tmp.outerSize()==m_outerSize.value());
130
+
131
+ // 2 - let's check whether there is enough allocated memory
132
+ Index nnz = tmp.nonZeros();
133
+ Index start = m_outerStart==0 ? 0 : m_matrix.outerIndexPtr()[m_outerStart]; // starting position of the current block
134
+ Index end = m_matrix.outerIndexPtr()[m_outerStart+m_outerSize.value()]; // ending position of the current block
135
+ Index block_size = end - start; // available room in the current block
136
+ Index tail_size = m_matrix.outerIndexPtr()[m_matrix.outerSize()] - end;
137
+
138
+ Index free_size = m_matrix.isCompressed()
139
+ ? Index(matrix.data().allocatedSize()) + block_size
140
+ : block_size;
141
+
142
+ Index tmp_start = tmp.outerIndexPtr()[0];
143
+
144
+ bool update_trailing_pointers = false;
145
+ if(nnz>free_size)
146
+ {
147
+ // realloc manually to reduce copies
148
+ typename SparseMatrixType::Storage newdata(m_matrix.data().allocatedSize() - block_size + nnz);
149
+
150
+ internal::smart_copy(m_matrix.valuePtr(), m_matrix.valuePtr() + start, newdata.valuePtr());
151
+ internal::smart_copy(m_matrix.innerIndexPtr(), m_matrix.innerIndexPtr() + start, newdata.indexPtr());
152
+
153
+ internal::smart_copy(tmp.valuePtr() + tmp_start, tmp.valuePtr() + tmp_start + nnz, newdata.valuePtr() + start);
154
+ internal::smart_copy(tmp.innerIndexPtr() + tmp_start, tmp.innerIndexPtr() + tmp_start + nnz, newdata.indexPtr() + start);
155
+
156
+ internal::smart_copy(matrix.valuePtr()+end, matrix.valuePtr()+end + tail_size, newdata.valuePtr()+start+nnz);
157
+ internal::smart_copy(matrix.innerIndexPtr()+end, matrix.innerIndexPtr()+end + tail_size, newdata.indexPtr()+start+nnz);
158
+
159
+ newdata.resize(m_matrix.outerIndexPtr()[m_matrix.outerSize()] - block_size + nnz);
160
+
161
+ matrix.data().swap(newdata);
162
+
163
+ update_trailing_pointers = true;
164
+ }
165
+ else
166
+ {
167
+ if(m_matrix.isCompressed() && nnz!=block_size)
168
+ {
169
+ // no need to realloc, simply copy the tail at its respective position and insert tmp
170
+ matrix.data().resize(start + nnz + tail_size);
171
+
172
+ internal::smart_memmove(matrix.valuePtr()+end, matrix.valuePtr() + end+tail_size, matrix.valuePtr() + start+nnz);
173
+ internal::smart_memmove(matrix.innerIndexPtr()+end, matrix.innerIndexPtr() + end+tail_size, matrix.innerIndexPtr() + start+nnz);
174
+
175
+ update_trailing_pointers = true;
176
+ }
177
+
178
+ internal::smart_copy(tmp.valuePtr() + tmp_start, tmp.valuePtr() + tmp_start + nnz, matrix.valuePtr() + start);
179
+ internal::smart_copy(tmp.innerIndexPtr() + tmp_start, tmp.innerIndexPtr() + tmp_start + nnz, matrix.innerIndexPtr() + start);
180
+ }
181
+
182
+ // update outer index pointers and innerNonZeros
183
+ if(IsVectorAtCompileTime)
184
+ {
185
+ if(!m_matrix.isCompressed())
186
+ matrix.innerNonZeroPtr()[m_outerStart] = StorageIndex(nnz);
187
+ matrix.outerIndexPtr()[m_outerStart] = StorageIndex(start);
188
+ }
189
+ else
190
+ {
191
+ StorageIndex p = StorageIndex(start);
192
+ for(Index k=0; k<m_outerSize.value(); ++k)
193
+ {
194
+ StorageIndex nnz_k = internal::convert_index<StorageIndex>(tmp.innerVector(k).nonZeros());
195
+ if(!m_matrix.isCompressed())
196
+ matrix.innerNonZeroPtr()[m_outerStart+k] = nnz_k;
197
+ matrix.outerIndexPtr()[m_outerStart+k] = p;
198
+ p += nnz_k;
199
+ }
200
+ }
201
+
202
+ if(update_trailing_pointers)
203
+ {
204
+ StorageIndex offset = internal::convert_index<StorageIndex>(nnz - block_size);
205
+ for(Index k = m_outerStart + m_outerSize.value(); k<=matrix.outerSize(); ++k)
206
+ {
207
+ matrix.outerIndexPtr()[k] += offset;
208
+ }
209
+ }
210
+
211
+ return derived();
212
+ }
213
+
214
+ inline BlockType& operator=(const BlockType& other)
215
+ {
216
+ return operator=<BlockType>(other);
217
+ }
218
+
219
+ inline const Scalar* valuePtr() const
220
+ { return m_matrix.valuePtr(); }
221
+ inline Scalar* valuePtr()
222
+ { return m_matrix.valuePtr(); }
223
+
224
+ inline const StorageIndex* innerIndexPtr() const
225
+ { return m_matrix.innerIndexPtr(); }
226
+ inline StorageIndex* innerIndexPtr()
227
+ { return m_matrix.innerIndexPtr(); }
228
+
229
+ inline const StorageIndex* outerIndexPtr() const
230
+ { return m_matrix.outerIndexPtr() + m_outerStart; }
231
+ inline StorageIndex* outerIndexPtr()
232
+ { return m_matrix.outerIndexPtr() + m_outerStart; }
233
+
234
+ inline const StorageIndex* innerNonZeroPtr() const
235
+ { return isCompressed() ? 0 : (m_matrix.innerNonZeroPtr()+m_outerStart); }
236
+ inline StorageIndex* innerNonZeroPtr()
237
+ { return isCompressed() ? 0 : (m_matrix.innerNonZeroPtr()+m_outerStart); }
238
+
239
+ bool isCompressed() const { return m_matrix.innerNonZeroPtr()==0; }
240
+
241
+ inline Scalar& coeffRef(Index row, Index col)
242
+ {
243
+ return m_matrix.coeffRef(row + (IsRowMajor ? m_outerStart : 0), col + (IsRowMajor ? 0 : m_outerStart));
244
+ }
245
+
246
+ inline const Scalar coeff(Index row, Index col) const
247
+ {
248
+ return m_matrix.coeff(row + (IsRowMajor ? m_outerStart : 0), col + (IsRowMajor ? 0 : m_outerStart));
249
+ }
250
+
251
+ inline const Scalar coeff(Index index) const
252
+ {
253
+ return m_matrix.coeff(IsRowMajor ? m_outerStart : index, IsRowMajor ? index : m_outerStart);
254
+ }
255
+
256
+ const Scalar& lastCoeff() const
257
+ {
258
+ EIGEN_STATIC_ASSERT_VECTOR_ONLY(sparse_matrix_block_impl);
259
+ eigen_assert(Base::nonZeros()>0);
260
+ if(m_matrix.isCompressed())
261
+ return m_matrix.valuePtr()[m_matrix.outerIndexPtr()[m_outerStart+1]-1];
262
+ else
263
+ return m_matrix.valuePtr()[m_matrix.outerIndexPtr()[m_outerStart]+m_matrix.innerNonZeroPtr()[m_outerStart]-1];
264
+ }
265
+
266
+ EIGEN_STRONG_INLINE Index rows() const { return IsRowMajor ? m_outerSize.value() : m_matrix.rows(); }
267
+ EIGEN_STRONG_INLINE Index cols() const { return IsRowMajor ? m_matrix.cols() : m_outerSize.value(); }
268
+
269
+ inline const SparseMatrixType& nestedExpression() const { return m_matrix; }
270
+ inline SparseMatrixType& nestedExpression() { return m_matrix; }
271
+ Index startRow() const { return IsRowMajor ? m_outerStart : 0; }
272
+ Index startCol() const { return IsRowMajor ? 0 : m_outerStart; }
273
+ Index blockRows() const { return IsRowMajor ? m_outerSize.value() : m_matrix.rows(); }
274
+ Index blockCols() const { return IsRowMajor ? m_matrix.cols() : m_outerSize.value(); }
275
+
276
+ protected:
277
+
278
+ typename internal::ref_selector<SparseMatrixType>::non_const_type m_matrix;
279
+ Index m_outerStart;
280
+ const internal::variable_if_dynamic<Index, OuterSize> m_outerSize;
281
+
282
+ };
283
+
284
+ } // namespace internal
285
+
286
+ template<typename _Scalar, int _Options, typename _StorageIndex, int BlockRows, int BlockCols>
287
+ class BlockImpl<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true,Sparse>
288
+ : public internal::sparse_matrix_block_impl<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols>
289
+ {
290
+ public:
291
+ typedef _StorageIndex StorageIndex;
292
+ typedef SparseMatrix<_Scalar, _Options, _StorageIndex> SparseMatrixType;
293
+ typedef internal::sparse_matrix_block_impl<SparseMatrixType,BlockRows,BlockCols> Base;
294
+ inline BlockImpl(SparseMatrixType& xpr, Index i)
295
+ : Base(xpr, i)
296
+ {}
297
+
298
+ inline BlockImpl(SparseMatrixType& xpr, Index startRow, Index startCol, Index blockRows, Index blockCols)
299
+ : Base(xpr, startRow, startCol, blockRows, blockCols)
300
+ {}
301
+
302
+ using Base::operator=;
303
+ };
304
+
305
+ template<typename _Scalar, int _Options, typename _StorageIndex, int BlockRows, int BlockCols>
306
+ class BlockImpl<const SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true,Sparse>
307
+ : public internal::sparse_matrix_block_impl<const SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols>
308
+ {
309
+ public:
310
+ typedef _StorageIndex StorageIndex;
311
+ typedef const SparseMatrix<_Scalar, _Options, _StorageIndex> SparseMatrixType;
312
+ typedef internal::sparse_matrix_block_impl<SparseMatrixType,BlockRows,BlockCols> Base;
313
+ inline BlockImpl(SparseMatrixType& xpr, Index i)
314
+ : Base(xpr, i)
315
+ {}
316
+
317
+ inline BlockImpl(SparseMatrixType& xpr, Index startRow, Index startCol, Index blockRows, Index blockCols)
318
+ : Base(xpr, startRow, startCol, blockRows, blockCols)
319
+ {}
320
+
321
+ using Base::operator=;
322
+ private:
323
+ template<typename Derived> BlockImpl(const SparseMatrixBase<Derived>& xpr, Index i);
324
+ template<typename Derived> BlockImpl(const SparseMatrixBase<Derived>& xpr);
325
+ };
326
+
327
+ //----------
328
+
329
+ /** Generic implementation of sparse Block expression.
330
+ * Real-only.
331
+ */
332
+ template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel>
333
+ class BlockImpl<XprType,BlockRows,BlockCols,InnerPanel,Sparse>
334
+ : public SparseMatrixBase<Block<XprType,BlockRows,BlockCols,InnerPanel> >, internal::no_assignment_operator
335
+ {
336
+ typedef Block<XprType, BlockRows, BlockCols, InnerPanel> BlockType;
337
+ typedef SparseMatrixBase<BlockType> Base;
338
+ using Base::convert_index;
339
+ public:
340
+ enum { IsRowMajor = internal::traits<BlockType>::IsRowMajor };
341
+ EIGEN_SPARSE_PUBLIC_INTERFACE(BlockType)
342
+
343
+ typedef typename internal::remove_all<typename XprType::Nested>::type _MatrixTypeNested;
344
+
345
+ /** Column or Row constructor
346
+ */
347
+ inline BlockImpl(XprType& xpr, Index i)
348
+ : m_matrix(xpr),
349
+ m_startRow( (BlockRows==1) && (BlockCols==XprType::ColsAtCompileTime) ? convert_index(i) : 0),
350
+ m_startCol( (BlockRows==XprType::RowsAtCompileTime) && (BlockCols==1) ? convert_index(i) : 0),
351
+ m_blockRows(BlockRows==1 ? 1 : xpr.rows()),
352
+ m_blockCols(BlockCols==1 ? 1 : xpr.cols())
353
+ {}
354
+
355
+ /** Dynamic-size constructor
356
+ */
357
+ inline BlockImpl(XprType& xpr, Index startRow, Index startCol, Index blockRows, Index blockCols)
358
+ : m_matrix(xpr), m_startRow(convert_index(startRow)), m_startCol(convert_index(startCol)), m_blockRows(convert_index(blockRows)), m_blockCols(convert_index(blockCols))
359
+ {}
360
+
361
+ inline Index rows() const { return m_blockRows.value(); }
362
+ inline Index cols() const { return m_blockCols.value(); }
363
+
364
+ inline Scalar& coeffRef(Index row, Index col)
365
+ {
366
+ return m_matrix.coeffRef(row + m_startRow.value(), col + m_startCol.value());
367
+ }
368
+
369
+ inline const Scalar coeff(Index row, Index col) const
370
+ {
371
+ return m_matrix.coeff(row + m_startRow.value(), col + m_startCol.value());
372
+ }
373
+
374
+ inline Scalar& coeffRef(Index index)
375
+ {
376
+ return m_matrix.coeffRef(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
377
+ m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
378
+ }
379
+
380
+ inline const Scalar coeff(Index index) const
381
+ {
382
+ return m_matrix.coeff(m_startRow.value() + (RowsAtCompileTime == 1 ? 0 : index),
383
+ m_startCol.value() + (RowsAtCompileTime == 1 ? index : 0));
384
+ }
385
+
386
+ inline const XprType& nestedExpression() const { return m_matrix; }
387
+ inline XprType& nestedExpression() { return m_matrix; }
388
+ Index startRow() const { return m_startRow.value(); }
389
+ Index startCol() const { return m_startCol.value(); }
390
+ Index blockRows() const { return m_blockRows.value(); }
391
+ Index blockCols() const { return m_blockCols.value(); }
392
+
393
+ protected:
394
+ // friend class internal::GenericSparseBlockInnerIteratorImpl<XprType,BlockRows,BlockCols,InnerPanel>;
395
+ friend struct internal::unary_evaluator<Block<XprType,BlockRows,BlockCols,InnerPanel>, internal::IteratorBased, Scalar >;
396
+
397
+ Index nonZeros() const { return Dynamic; }
398
+
399
+ typename internal::ref_selector<XprType>::non_const_type m_matrix;
400
+ const internal::variable_if_dynamic<Index, XprType::RowsAtCompileTime == 1 ? 0 : Dynamic> m_startRow;
401
+ const internal::variable_if_dynamic<Index, XprType::ColsAtCompileTime == 1 ? 0 : Dynamic> m_startCol;
402
+ const internal::variable_if_dynamic<Index, RowsAtCompileTime> m_blockRows;
403
+ const internal::variable_if_dynamic<Index, ColsAtCompileTime> m_blockCols;
404
+
405
+ protected:
406
+ // Disable assignment with clear error message.
407
+ // Note that simply removing operator= yields compilation errors with ICC+MSVC
408
+ template<typename T>
409
+ BlockImpl& operator=(const T&)
410
+ {
411
+ EIGEN_STATIC_ASSERT(sizeof(T)==0, THIS_SPARSE_BLOCK_SUBEXPRESSION_IS_READ_ONLY);
412
+ return *this;
413
+ }
414
+
415
+ };
416
+
417
+ namespace internal {
418
+
419
+ template<typename ArgType, int BlockRows, int BlockCols, bool InnerPanel>
420
+ struct unary_evaluator<Block<ArgType,BlockRows,BlockCols,InnerPanel>, IteratorBased >
421
+ : public evaluator_base<Block<ArgType,BlockRows,BlockCols,InnerPanel> >
422
+ {
423
+ class InnerVectorInnerIterator;
424
+ class OuterVectorInnerIterator;
425
+ public:
426
+ typedef Block<ArgType,BlockRows,BlockCols,InnerPanel> XprType;
427
+ typedef typename XprType::StorageIndex StorageIndex;
428
+ typedef typename XprType::Scalar Scalar;
429
+
430
+ enum {
431
+ IsRowMajor = XprType::IsRowMajor,
432
+
433
+ OuterVector = (BlockCols==1 && ArgType::IsRowMajor)
434
+ | // FIXME | instead of || to please GCC 4.4.0 stupid warning "suggest parentheses around &&".
435
+ // revert to || as soon as not needed anymore.
436
+ (BlockRows==1 && !ArgType::IsRowMajor),
437
+
438
+ CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
439
+ Flags = XprType::Flags
440
+ };
441
+
442
+ typedef typename internal::conditional<OuterVector,OuterVectorInnerIterator,InnerVectorInnerIterator>::type InnerIterator;
443
+
444
+ explicit unary_evaluator(const XprType& op)
445
+ : m_argImpl(op.nestedExpression()), m_block(op)
446
+ {}
447
+
448
+ inline Index nonZerosEstimate() const {
449
+ const Index nnz = m_block.nonZeros();
450
+ if(nnz < 0) {
451
+ // Scale the non-zero estimate for the underlying expression linearly with block size.
452
+ // Return zero if the underlying block is empty.
453
+ const Index nested_sz = m_block.nestedExpression().size();
454
+ return nested_sz == 0 ? 0 : m_argImpl.nonZerosEstimate() * m_block.size() / nested_sz;
455
+ }
456
+ return nnz;
457
+ }
458
+
459
+ protected:
460
+ typedef typename evaluator<ArgType>::InnerIterator EvalIterator;
461
+
462
+ evaluator<ArgType> m_argImpl;
463
+ const XprType &m_block;
464
+ };
465
+
466
+ template<typename ArgType, int BlockRows, int BlockCols, bool InnerPanel>
467
+ class unary_evaluator<Block<ArgType,BlockRows,BlockCols,InnerPanel>, IteratorBased>::InnerVectorInnerIterator
468
+ : public EvalIterator
469
+ {
470
+ // NOTE MSVC fails to compile if we don't explicitely "import" IsRowMajor from unary_evaluator
471
+ // because the base class EvalIterator has a private IsRowMajor enum too. (bug #1786)
472
+ // NOTE We cannot call it IsRowMajor because it would shadow unary_evaluator::IsRowMajor
473
+ enum { XprIsRowMajor = unary_evaluator::IsRowMajor };
474
+ const XprType& m_block;
475
+ Index m_end;
476
+ public:
477
+
478
+ EIGEN_STRONG_INLINE InnerVectorInnerIterator(const unary_evaluator& aEval, Index outer)
479
+ : EvalIterator(aEval.m_argImpl, outer + (XprIsRowMajor ? aEval.m_block.startRow() : aEval.m_block.startCol())),
480
+ m_block(aEval.m_block),
481
+ m_end(XprIsRowMajor ? aEval.m_block.startCol()+aEval.m_block.blockCols() : aEval.m_block.startRow()+aEval.m_block.blockRows())
482
+ {
483
+ while( (EvalIterator::operator bool()) && (EvalIterator::index() < (XprIsRowMajor ? m_block.startCol() : m_block.startRow())) )
484
+ EvalIterator::operator++();
485
+ }
486
+
487
+ inline StorageIndex index() const { return EvalIterator::index() - convert_index<StorageIndex>(XprIsRowMajor ? m_block.startCol() : m_block.startRow()); }
488
+ inline Index outer() const { return EvalIterator::outer() - (XprIsRowMajor ? m_block.startRow() : m_block.startCol()); }
489
+ inline Index row() const { return EvalIterator::row() - m_block.startRow(); }
490
+ inline Index col() const { return EvalIterator::col() - m_block.startCol(); }
491
+
492
+ inline operator bool() const { return EvalIterator::operator bool() && EvalIterator::index() < m_end; }
493
+ };
494
+
495
+ template<typename ArgType, int BlockRows, int BlockCols, bool InnerPanel>
496
+ class unary_evaluator<Block<ArgType,BlockRows,BlockCols,InnerPanel>, IteratorBased>::OuterVectorInnerIterator
497
+ {
498
+ // NOTE see above
499
+ enum { XprIsRowMajor = unary_evaluator::IsRowMajor };
500
+ const unary_evaluator& m_eval;
501
+ Index m_outerPos;
502
+ const Index m_innerIndex;
503
+ Index m_end;
504
+ EvalIterator m_it;
505
+ public:
506
+
507
+ EIGEN_STRONG_INLINE OuterVectorInnerIterator(const unary_evaluator& aEval, Index outer)
508
+ : m_eval(aEval),
509
+ m_outerPos( (XprIsRowMajor ? aEval.m_block.startCol() : aEval.m_block.startRow()) ),
510
+ m_innerIndex(XprIsRowMajor ? aEval.m_block.startRow() : aEval.m_block.startCol()),
511
+ m_end(XprIsRowMajor ? aEval.m_block.startCol()+aEval.m_block.blockCols() : aEval.m_block.startRow()+aEval.m_block.blockRows()),
512
+ m_it(m_eval.m_argImpl, m_outerPos)
513
+ {
514
+ EIGEN_UNUSED_VARIABLE(outer);
515
+ eigen_assert(outer==0);
516
+
517
+ while(m_it && m_it.index() < m_innerIndex) ++m_it;
518
+ if((!m_it) || (m_it.index()!=m_innerIndex))
519
+ ++(*this);
520
+ }
521
+
522
+ inline StorageIndex index() const { return convert_index<StorageIndex>(m_outerPos - (XprIsRowMajor ? m_eval.m_block.startCol() : m_eval.m_block.startRow())); }
523
+ inline Index outer() const { return 0; }
524
+ inline Index row() const { return XprIsRowMajor ? 0 : index(); }
525
+ inline Index col() const { return XprIsRowMajor ? index() : 0; }
526
+
527
+ inline Scalar value() const { return m_it.value(); }
528
+ inline Scalar& valueRef() { return m_it.valueRef(); }
529
+
530
+ inline OuterVectorInnerIterator& operator++()
531
+ {
532
+ // search next non-zero entry
533
+ while(++m_outerPos<m_end)
534
+ {
535
+ // Restart iterator at the next inner-vector:
536
+ m_it.~EvalIterator();
537
+ ::new (&m_it) EvalIterator(m_eval.m_argImpl, m_outerPos);
538
+ // search for the key m_innerIndex in the current outer-vector
539
+ while(m_it && m_it.index() < m_innerIndex) ++m_it;
540
+ if(m_it && m_it.index()==m_innerIndex) break;
541
+ }
542
+ return *this;
543
+ }
544
+
545
+ inline operator bool() const { return m_outerPos < m_end; }
546
+ };
547
+
548
+ template<typename _Scalar, int _Options, typename _StorageIndex, int BlockRows, int BlockCols>
549
+ struct unary_evaluator<Block<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true>, IteratorBased>
550
+ : evaluator<SparseCompressedBase<Block<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true> > >
551
+ {
552
+ typedef Block<SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true> XprType;
553
+ typedef evaluator<SparseCompressedBase<XprType> > Base;
554
+ explicit unary_evaluator(const XprType &xpr) : Base(xpr) {}
555
+ };
556
+
557
+ template<typename _Scalar, int _Options, typename _StorageIndex, int BlockRows, int BlockCols>
558
+ struct unary_evaluator<Block<const SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true>, IteratorBased>
559
+ : evaluator<SparseCompressedBase<Block<const SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true> > >
560
+ {
561
+ typedef Block<const SparseMatrix<_Scalar, _Options, _StorageIndex>,BlockRows,BlockCols,true> XprType;
562
+ typedef evaluator<SparseCompressedBase<XprType> > Base;
563
+ explicit unary_evaluator(const XprType &xpr) : Base(xpr) {}
564
+ };
565
+
566
+ } // end namespace internal
567
+
568
+
569
+ } // end namespace Eigen
570
+
571
+ #endif // EIGEN_SPARSE_BLOCK_H