umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,685 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2006-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_DENSECOEFFSBASE_H
11
+ #define EIGEN_DENSECOEFFSBASE_H
12
+
13
+ namespace Eigen {
14
+
15
+ namespace internal {
16
+ template<typename T> struct add_const_on_value_type_if_arithmetic
17
+ {
18
+ typedef typename conditional<is_arithmetic<T>::value, T, typename add_const_on_value_type<T>::type>::type type;
19
+ };
20
+ }
21
+
22
+ /** \brief Base class providing read-only coefficient access to matrices and arrays.
23
+ * \ingroup Core_Module
24
+ * \tparam Derived Type of the derived class
25
+ *
26
+ * \note #ReadOnlyAccessors Constant indicating read-only access
27
+ *
28
+ * This class defines the \c operator() \c const function and friends, which can be used to read specific
29
+ * entries of a matrix or array.
30
+ *
31
+ * \sa DenseCoeffsBase<Derived, WriteAccessors>, DenseCoeffsBase<Derived, DirectAccessors>,
32
+ * \ref TopicClassHierarchy
33
+ */
34
+ template<typename Derived>
35
+ class DenseCoeffsBase<Derived,ReadOnlyAccessors> : public EigenBase<Derived>
36
+ {
37
+ public:
38
+ typedef typename internal::traits<Derived>::StorageKind StorageKind;
39
+ typedef typename internal::traits<Derived>::Scalar Scalar;
40
+ typedef typename internal::packet_traits<Scalar>::type PacketScalar;
41
+
42
+ // Explanation for this CoeffReturnType typedef.
43
+ // - This is the return type of the coeff() method.
44
+ // - The LvalueBit means exactly that we can offer a coeffRef() method, which means exactly that we can get references
45
+ // to coeffs, which means exactly that we can have coeff() return a const reference (as opposed to returning a value).
46
+ // - The is_artihmetic check is required since "const int", "const double", etc. will cause warnings on some systems
47
+ // while the declaration of "const T", where T is a non arithmetic type does not. Always returning "const Scalar&" is
48
+ // not possible, since the underlying expressions might not offer a valid address the reference could be referring to.
49
+ typedef typename internal::conditional<bool(internal::traits<Derived>::Flags&LvalueBit),
50
+ const Scalar&,
51
+ typename internal::conditional<internal::is_arithmetic<Scalar>::value, Scalar, const Scalar>::type
52
+ >::type CoeffReturnType;
53
+
54
+ typedef typename internal::add_const_on_value_type_if_arithmetic<
55
+ typename internal::packet_traits<Scalar>::type
56
+ >::type PacketReturnType;
57
+
58
+ typedef EigenBase<Derived> Base;
59
+ using Base::rows;
60
+ using Base::cols;
61
+ using Base::size;
62
+ using Base::derived;
63
+
64
+ EIGEN_DEVICE_FUNC
65
+ EIGEN_STRONG_INLINE Index rowIndexByOuterInner(Index outer, Index inner) const
66
+ {
67
+ return int(Derived::RowsAtCompileTime) == 1 ? 0
68
+ : int(Derived::ColsAtCompileTime) == 1 ? inner
69
+ : int(Derived::Flags)&RowMajorBit ? outer
70
+ : inner;
71
+ }
72
+
73
+ EIGEN_DEVICE_FUNC
74
+ EIGEN_STRONG_INLINE Index colIndexByOuterInner(Index outer, Index inner) const
75
+ {
76
+ return int(Derived::ColsAtCompileTime) == 1 ? 0
77
+ : int(Derived::RowsAtCompileTime) == 1 ? inner
78
+ : int(Derived::Flags)&RowMajorBit ? inner
79
+ : outer;
80
+ }
81
+
82
+ /** Short version: don't use this function, use
83
+ * \link operator()(Index,Index) const \endlink instead.
84
+ *
85
+ * Long version: this function is similar to
86
+ * \link operator()(Index,Index) const \endlink, but without the assertion.
87
+ * Use this for limiting the performance cost of debugging code when doing
88
+ * repeated coefficient access. Only use this when it is guaranteed that the
89
+ * parameters \a row and \a col are in range.
90
+ *
91
+ * If EIGEN_INTERNAL_DEBUGGING is defined, an assertion will be made, making this
92
+ * function equivalent to \link operator()(Index,Index) const \endlink.
93
+ *
94
+ * \sa operator()(Index,Index) const, coeffRef(Index,Index), coeff(Index) const
95
+ */
96
+ EIGEN_DEVICE_FUNC
97
+ EIGEN_STRONG_INLINE CoeffReturnType coeff(Index row, Index col) const
98
+ {
99
+ eigen_internal_assert(row >= 0 && row < rows()
100
+ && col >= 0 && col < cols());
101
+ return internal::evaluator<Derived>(derived()).coeff(row,col);
102
+ }
103
+
104
+ EIGEN_DEVICE_FUNC
105
+ EIGEN_STRONG_INLINE CoeffReturnType coeffByOuterInner(Index outer, Index inner) const
106
+ {
107
+ return coeff(rowIndexByOuterInner(outer, inner),
108
+ colIndexByOuterInner(outer, inner));
109
+ }
110
+
111
+ /** \returns the coefficient at given the given row and column.
112
+ *
113
+ * \sa operator()(Index,Index), operator[](Index)
114
+ */
115
+ EIGEN_DEVICE_FUNC
116
+ EIGEN_STRONG_INLINE CoeffReturnType operator()(Index row, Index col) const
117
+ {
118
+ eigen_assert(row >= 0 && row < rows()
119
+ && col >= 0 && col < cols());
120
+ return coeff(row, col);
121
+ }
122
+
123
+ /** Short version: don't use this function, use
124
+ * \link operator[](Index) const \endlink instead.
125
+ *
126
+ * Long version: this function is similar to
127
+ * \link operator[](Index) const \endlink, but without the assertion.
128
+ * Use this for limiting the performance cost of debugging code when doing
129
+ * repeated coefficient access. Only use this when it is guaranteed that the
130
+ * parameter \a index is in range.
131
+ *
132
+ * If EIGEN_INTERNAL_DEBUGGING is defined, an assertion will be made, making this
133
+ * function equivalent to \link operator[](Index) const \endlink.
134
+ *
135
+ * \sa operator[](Index) const, coeffRef(Index), coeff(Index,Index) const
136
+ */
137
+
138
+ EIGEN_DEVICE_FUNC
139
+ EIGEN_STRONG_INLINE CoeffReturnType
140
+ coeff(Index index) const
141
+ {
142
+ EIGEN_STATIC_ASSERT(internal::evaluator<Derived>::Flags & LinearAccessBit,
143
+ THIS_COEFFICIENT_ACCESSOR_TAKING_ONE_ACCESS_IS_ONLY_FOR_EXPRESSIONS_ALLOWING_LINEAR_ACCESS)
144
+ eigen_internal_assert(index >= 0 && index < size());
145
+ return internal::evaluator<Derived>(derived()).coeff(index);
146
+ }
147
+
148
+
149
+ /** \returns the coefficient at given index.
150
+ *
151
+ * This method is allowed only for vector expressions, and for matrix expressions having the LinearAccessBit.
152
+ *
153
+ * \sa operator[](Index), operator()(Index,Index) const, x() const, y() const,
154
+ * z() const, w() const
155
+ */
156
+
157
+ EIGEN_DEVICE_FUNC
158
+ EIGEN_STRONG_INLINE CoeffReturnType
159
+ operator[](Index index) const
160
+ {
161
+ EIGEN_STATIC_ASSERT(Derived::IsVectorAtCompileTime,
162
+ THE_BRACKET_OPERATOR_IS_ONLY_FOR_VECTORS__USE_THE_PARENTHESIS_OPERATOR_INSTEAD)
163
+ eigen_assert(index >= 0 && index < size());
164
+ return coeff(index);
165
+ }
166
+
167
+ /** \returns the coefficient at given index.
168
+ *
169
+ * This is synonymous to operator[](Index) const.
170
+ *
171
+ * This method is allowed only for vector expressions, and for matrix expressions having the LinearAccessBit.
172
+ *
173
+ * \sa operator[](Index), operator()(Index,Index) const, x() const, y() const,
174
+ * z() const, w() const
175
+ */
176
+
177
+ EIGEN_DEVICE_FUNC
178
+ EIGEN_STRONG_INLINE CoeffReturnType
179
+ operator()(Index index) const
180
+ {
181
+ eigen_assert(index >= 0 && index < size());
182
+ return coeff(index);
183
+ }
184
+
185
+ /** equivalent to operator[](0). */
186
+
187
+ EIGEN_DEVICE_FUNC
188
+ EIGEN_STRONG_INLINE CoeffReturnType
189
+ x() const { return (*this)[0]; }
190
+
191
+ /** equivalent to operator[](1). */
192
+
193
+ EIGEN_DEVICE_FUNC
194
+ EIGEN_STRONG_INLINE CoeffReturnType
195
+ y() const
196
+ {
197
+ EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=2, OUT_OF_RANGE_ACCESS);
198
+ return (*this)[1];
199
+ }
200
+
201
+ /** equivalent to operator[](2). */
202
+
203
+ EIGEN_DEVICE_FUNC
204
+ EIGEN_STRONG_INLINE CoeffReturnType
205
+ z() const
206
+ {
207
+ EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=3, OUT_OF_RANGE_ACCESS);
208
+ return (*this)[2];
209
+ }
210
+
211
+ /** equivalent to operator[](3). */
212
+
213
+ EIGEN_DEVICE_FUNC
214
+ EIGEN_STRONG_INLINE CoeffReturnType
215
+ w() const
216
+ {
217
+ EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=4, OUT_OF_RANGE_ACCESS);
218
+ return (*this)[3];
219
+ }
220
+
221
+ /** \internal
222
+ * \returns the packet of coefficients starting at the given row and column. It is your responsibility
223
+ * to ensure that a packet really starts there. This method is only available on expressions having the
224
+ * PacketAccessBit.
225
+ *
226
+ * The \a LoadMode parameter may have the value \a #Aligned or \a #Unaligned. Its effect is to select
227
+ * the appropriate vectorization instruction. Aligned access is faster, but is only possible for packets
228
+ * starting at an address which is a multiple of the packet size.
229
+ */
230
+
231
+ template<int LoadMode>
232
+ EIGEN_STRONG_INLINE PacketReturnType packet(Index row, Index col) const
233
+ {
234
+ typedef typename internal::packet_traits<Scalar>::type DefaultPacketType;
235
+ eigen_internal_assert(row >= 0 && row < rows() && col >= 0 && col < cols());
236
+ return internal::evaluator<Derived>(derived()).template packet<LoadMode,DefaultPacketType>(row,col);
237
+ }
238
+
239
+
240
+ /** \internal */
241
+ template<int LoadMode>
242
+ EIGEN_STRONG_INLINE PacketReturnType packetByOuterInner(Index outer, Index inner) const
243
+ {
244
+ return packet<LoadMode>(rowIndexByOuterInner(outer, inner),
245
+ colIndexByOuterInner(outer, inner));
246
+ }
247
+
248
+ /** \internal
249
+ * \returns the packet of coefficients starting at the given index. It is your responsibility
250
+ * to ensure that a packet really starts there. This method is only available on expressions having the
251
+ * PacketAccessBit and the LinearAccessBit.
252
+ *
253
+ * The \a LoadMode parameter may have the value \a #Aligned or \a #Unaligned. Its effect is to select
254
+ * the appropriate vectorization instruction. Aligned access is faster, but is only possible for packets
255
+ * starting at an address which is a multiple of the packet size.
256
+ */
257
+
258
+ template<int LoadMode>
259
+ EIGEN_STRONG_INLINE PacketReturnType packet(Index index) const
260
+ {
261
+ EIGEN_STATIC_ASSERT(internal::evaluator<Derived>::Flags & LinearAccessBit,
262
+ THIS_COEFFICIENT_ACCESSOR_TAKING_ONE_ACCESS_IS_ONLY_FOR_EXPRESSIONS_ALLOWING_LINEAR_ACCESS)
263
+ typedef typename internal::packet_traits<Scalar>::type DefaultPacketType;
264
+ eigen_internal_assert(index >= 0 && index < size());
265
+ return internal::evaluator<Derived>(derived()).template packet<LoadMode,DefaultPacketType>(index);
266
+ }
267
+
268
+ protected:
269
+ // explanation: DenseBase is doing "using ..." on the methods from DenseCoeffsBase.
270
+ // But some methods are only available in the DirectAccess case.
271
+ // So we add dummy methods here with these names, so that "using... " doesn't fail.
272
+ // It's not private so that the child class DenseBase can access them, and it's not public
273
+ // either since it's an implementation detail, so has to be protected.
274
+ void coeffRef();
275
+ void coeffRefByOuterInner();
276
+ void writePacket();
277
+ void writePacketByOuterInner();
278
+ void copyCoeff();
279
+ void copyCoeffByOuterInner();
280
+ void copyPacket();
281
+ void copyPacketByOuterInner();
282
+ void stride();
283
+ void innerStride();
284
+ void outerStride();
285
+ void rowStride();
286
+ void colStride();
287
+ };
288
+
289
+ /** \brief Base class providing read/write coefficient access to matrices and arrays.
290
+ * \ingroup Core_Module
291
+ * \tparam Derived Type of the derived class
292
+ *
293
+ * \note #WriteAccessors Constant indicating read/write access
294
+ *
295
+ * This class defines the non-const \c operator() function and friends, which can be used to write specific
296
+ * entries of a matrix or array. This class inherits DenseCoeffsBase<Derived, ReadOnlyAccessors> which
297
+ * defines the const variant for reading specific entries.
298
+ *
299
+ * \sa DenseCoeffsBase<Derived, DirectAccessors>, \ref TopicClassHierarchy
300
+ */
301
+ template<typename Derived>
302
+ class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
303
+ {
304
+ public:
305
+
306
+ typedef DenseCoeffsBase<Derived, ReadOnlyAccessors> Base;
307
+
308
+ typedef typename internal::traits<Derived>::StorageKind StorageKind;
309
+ typedef typename internal::traits<Derived>::Scalar Scalar;
310
+ typedef typename internal::packet_traits<Scalar>::type PacketScalar;
311
+ typedef typename NumTraits<Scalar>::Real RealScalar;
312
+
313
+ using Base::coeff;
314
+ using Base::rows;
315
+ using Base::cols;
316
+ using Base::size;
317
+ using Base::derived;
318
+ using Base::rowIndexByOuterInner;
319
+ using Base::colIndexByOuterInner;
320
+ using Base::operator[];
321
+ using Base::operator();
322
+ using Base::x;
323
+ using Base::y;
324
+ using Base::z;
325
+ using Base::w;
326
+
327
+ /** Short version: don't use this function, use
328
+ * \link operator()(Index,Index) \endlink instead.
329
+ *
330
+ * Long version: this function is similar to
331
+ * \link operator()(Index,Index) \endlink, but without the assertion.
332
+ * Use this for limiting the performance cost of debugging code when doing
333
+ * repeated coefficient access. Only use this when it is guaranteed that the
334
+ * parameters \a row and \a col are in range.
335
+ *
336
+ * If EIGEN_INTERNAL_DEBUGGING is defined, an assertion will be made, making this
337
+ * function equivalent to \link operator()(Index,Index) \endlink.
338
+ *
339
+ * \sa operator()(Index,Index), coeff(Index, Index) const, coeffRef(Index)
340
+ */
341
+ EIGEN_DEVICE_FUNC
342
+ EIGEN_STRONG_INLINE Scalar& coeffRef(Index row, Index col)
343
+ {
344
+ eigen_internal_assert(row >= 0 && row < rows()
345
+ && col >= 0 && col < cols());
346
+ return internal::evaluator<Derived>(derived()).coeffRef(row,col);
347
+ }
348
+
349
+ EIGEN_DEVICE_FUNC
350
+ EIGEN_STRONG_INLINE Scalar&
351
+ coeffRefByOuterInner(Index outer, Index inner)
352
+ {
353
+ return coeffRef(rowIndexByOuterInner(outer, inner),
354
+ colIndexByOuterInner(outer, inner));
355
+ }
356
+
357
+ /** \returns a reference to the coefficient at given the given row and column.
358
+ *
359
+ * \sa operator[](Index)
360
+ */
361
+
362
+ EIGEN_DEVICE_FUNC
363
+ EIGEN_STRONG_INLINE Scalar&
364
+ operator()(Index row, Index col)
365
+ {
366
+ eigen_assert(row >= 0 && row < rows()
367
+ && col >= 0 && col < cols());
368
+ return coeffRef(row, col);
369
+ }
370
+
371
+
372
+ /** Short version: don't use this function, use
373
+ * \link operator[](Index) \endlink instead.
374
+ *
375
+ * Long version: this function is similar to
376
+ * \link operator[](Index) \endlink, but without the assertion.
377
+ * Use this for limiting the performance cost of debugging code when doing
378
+ * repeated coefficient access. Only use this when it is guaranteed that the
379
+ * parameters \a row and \a col are in range.
380
+ *
381
+ * If EIGEN_INTERNAL_DEBUGGING is defined, an assertion will be made, making this
382
+ * function equivalent to \link operator[](Index) \endlink.
383
+ *
384
+ * \sa operator[](Index), coeff(Index) const, coeffRef(Index,Index)
385
+ */
386
+
387
+ EIGEN_DEVICE_FUNC
388
+ EIGEN_STRONG_INLINE Scalar&
389
+ coeffRef(Index index)
390
+ {
391
+ EIGEN_STATIC_ASSERT(internal::evaluator<Derived>::Flags & LinearAccessBit,
392
+ THIS_COEFFICIENT_ACCESSOR_TAKING_ONE_ACCESS_IS_ONLY_FOR_EXPRESSIONS_ALLOWING_LINEAR_ACCESS)
393
+ eigen_internal_assert(index >= 0 && index < size());
394
+ return internal::evaluator<Derived>(derived()).coeffRef(index);
395
+ }
396
+
397
+ /** \returns a reference to the coefficient at given index.
398
+ *
399
+ * This method is allowed only for vector expressions, and for matrix expressions having the LinearAccessBit.
400
+ *
401
+ * \sa operator[](Index) const, operator()(Index,Index), x(), y(), z(), w()
402
+ */
403
+
404
+ EIGEN_DEVICE_FUNC
405
+ EIGEN_STRONG_INLINE Scalar&
406
+ operator[](Index index)
407
+ {
408
+ EIGEN_STATIC_ASSERT(Derived::IsVectorAtCompileTime,
409
+ THE_BRACKET_OPERATOR_IS_ONLY_FOR_VECTORS__USE_THE_PARENTHESIS_OPERATOR_INSTEAD)
410
+ eigen_assert(index >= 0 && index < size());
411
+ return coeffRef(index);
412
+ }
413
+
414
+ /** \returns a reference to the coefficient at given index.
415
+ *
416
+ * This is synonymous to operator[](Index).
417
+ *
418
+ * This method is allowed only for vector expressions, and for matrix expressions having the LinearAccessBit.
419
+ *
420
+ * \sa operator[](Index) const, operator()(Index,Index), x(), y(), z(), w()
421
+ */
422
+
423
+ EIGEN_DEVICE_FUNC
424
+ EIGEN_STRONG_INLINE Scalar&
425
+ operator()(Index index)
426
+ {
427
+ eigen_assert(index >= 0 && index < size());
428
+ return coeffRef(index);
429
+ }
430
+
431
+ /** equivalent to operator[](0). */
432
+
433
+ EIGEN_DEVICE_FUNC
434
+ EIGEN_STRONG_INLINE Scalar&
435
+ x() { return (*this)[0]; }
436
+
437
+ /** equivalent to operator[](1). */
438
+
439
+ EIGEN_DEVICE_FUNC
440
+ EIGEN_STRONG_INLINE Scalar&
441
+ y()
442
+ {
443
+ EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=2, OUT_OF_RANGE_ACCESS);
444
+ return (*this)[1];
445
+ }
446
+
447
+ /** equivalent to operator[](2). */
448
+
449
+ EIGEN_DEVICE_FUNC
450
+ EIGEN_STRONG_INLINE Scalar&
451
+ z()
452
+ {
453
+ EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=3, OUT_OF_RANGE_ACCESS);
454
+ return (*this)[2];
455
+ }
456
+
457
+ /** equivalent to operator[](3). */
458
+
459
+ EIGEN_DEVICE_FUNC
460
+ EIGEN_STRONG_INLINE Scalar&
461
+ w()
462
+ {
463
+ EIGEN_STATIC_ASSERT(Derived::SizeAtCompileTime==-1 || Derived::SizeAtCompileTime>=4, OUT_OF_RANGE_ACCESS);
464
+ return (*this)[3];
465
+ }
466
+ };
467
+
468
+ /** \brief Base class providing direct read-only coefficient access to matrices and arrays.
469
+ * \ingroup Core_Module
470
+ * \tparam Derived Type of the derived class
471
+ *
472
+ * \note #DirectAccessors Constant indicating direct access
473
+ *
474
+ * This class defines functions to work with strides which can be used to access entries directly. This class
475
+ * inherits DenseCoeffsBase<Derived, ReadOnlyAccessors> which defines functions to access entries read-only using
476
+ * \c operator() .
477
+ *
478
+ * \sa \blank \ref TopicClassHierarchy
479
+ */
480
+ template<typename Derived>
481
+ class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
482
+ {
483
+ public:
484
+
485
+ typedef DenseCoeffsBase<Derived, ReadOnlyAccessors> Base;
486
+ typedef typename internal::traits<Derived>::Scalar Scalar;
487
+ typedef typename NumTraits<Scalar>::Real RealScalar;
488
+
489
+ using Base::rows;
490
+ using Base::cols;
491
+ using Base::size;
492
+ using Base::derived;
493
+
494
+ /** \returns the pointer increment between two consecutive elements within a slice in the inner direction.
495
+ *
496
+ * \sa outerStride(), rowStride(), colStride()
497
+ */
498
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
499
+ inline Index innerStride() const
500
+ {
501
+ return derived().innerStride();
502
+ }
503
+
504
+ /** \returns the pointer increment between two consecutive inner slices (for example, between two consecutive columns
505
+ * in a column-major matrix).
506
+ *
507
+ * \sa innerStride(), rowStride(), colStride()
508
+ */
509
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
510
+ inline Index outerStride() const
511
+ {
512
+ return derived().outerStride();
513
+ }
514
+
515
+ // FIXME shall we remove it ?
516
+ EIGEN_CONSTEXPR inline Index stride() const
517
+ {
518
+ return Derived::IsVectorAtCompileTime ? innerStride() : outerStride();
519
+ }
520
+
521
+ /** \returns the pointer increment between two consecutive rows.
522
+ *
523
+ * \sa innerStride(), outerStride(), colStride()
524
+ */
525
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
526
+ inline Index rowStride() const
527
+ {
528
+ return Derived::IsRowMajor ? outerStride() : innerStride();
529
+ }
530
+
531
+ /** \returns the pointer increment between two consecutive columns.
532
+ *
533
+ * \sa innerStride(), outerStride(), rowStride()
534
+ */
535
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
536
+ inline Index colStride() const
537
+ {
538
+ return Derived::IsRowMajor ? innerStride() : outerStride();
539
+ }
540
+ };
541
+
542
+ /** \brief Base class providing direct read/write coefficient access to matrices and arrays.
543
+ * \ingroup Core_Module
544
+ * \tparam Derived Type of the derived class
545
+ *
546
+ * \note #DirectWriteAccessors Constant indicating direct access
547
+ *
548
+ * This class defines functions to work with strides which can be used to access entries directly. This class
549
+ * inherits DenseCoeffsBase<Derived, WriteAccessors> which defines functions to access entries read/write using
550
+ * \c operator().
551
+ *
552
+ * \sa \blank \ref TopicClassHierarchy
553
+ */
554
+ template<typename Derived>
555
+ class DenseCoeffsBase<Derived, DirectWriteAccessors>
556
+ : public DenseCoeffsBase<Derived, WriteAccessors>
557
+ {
558
+ public:
559
+
560
+ typedef DenseCoeffsBase<Derived, WriteAccessors> Base;
561
+ typedef typename internal::traits<Derived>::Scalar Scalar;
562
+ typedef typename NumTraits<Scalar>::Real RealScalar;
563
+
564
+ using Base::rows;
565
+ using Base::cols;
566
+ using Base::size;
567
+ using Base::derived;
568
+
569
+ /** \returns the pointer increment between two consecutive elements within a slice in the inner direction.
570
+ *
571
+ * \sa outerStride(), rowStride(), colStride()
572
+ */
573
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
574
+ inline Index innerStride() const EIGEN_NOEXCEPT
575
+ {
576
+ return derived().innerStride();
577
+ }
578
+
579
+ /** \returns the pointer increment between two consecutive inner slices (for example, between two consecutive columns
580
+ * in a column-major matrix).
581
+ *
582
+ * \sa innerStride(), rowStride(), colStride()
583
+ */
584
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
585
+ inline Index outerStride() const EIGEN_NOEXCEPT
586
+ {
587
+ return derived().outerStride();
588
+ }
589
+
590
+ // FIXME shall we remove it ?
591
+ EIGEN_CONSTEXPR inline Index stride() const EIGEN_NOEXCEPT
592
+ {
593
+ return Derived::IsVectorAtCompileTime ? innerStride() : outerStride();
594
+ }
595
+
596
+ /** \returns the pointer increment between two consecutive rows.
597
+ *
598
+ * \sa innerStride(), outerStride(), colStride()
599
+ */
600
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
601
+ inline Index rowStride() const EIGEN_NOEXCEPT
602
+ {
603
+ return Derived::IsRowMajor ? outerStride() : innerStride();
604
+ }
605
+
606
+ /** \returns the pointer increment between two consecutive columns.
607
+ *
608
+ * \sa innerStride(), outerStride(), rowStride()
609
+ */
610
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
611
+ inline Index colStride() const EIGEN_NOEXCEPT
612
+ {
613
+ return Derived::IsRowMajor ? innerStride() : outerStride();
614
+ }
615
+ };
616
+
617
+ namespace internal {
618
+
619
+ template<int Alignment, typename Derived, bool JustReturnZero>
620
+ struct first_aligned_impl
621
+ {
622
+ static EIGEN_CONSTEXPR inline Index run(const Derived&) EIGEN_NOEXCEPT
623
+ { return 0; }
624
+ };
625
+
626
+ template<int Alignment, typename Derived>
627
+ struct first_aligned_impl<Alignment, Derived, false>
628
+ {
629
+ static inline Index run(const Derived& m)
630
+ {
631
+ return internal::first_aligned<Alignment>(m.data(), m.size());
632
+ }
633
+ };
634
+
635
+ /** \internal \returns the index of the first element of the array stored by \a m that is properly aligned with respect to \a Alignment for vectorization.
636
+ *
637
+ * \tparam Alignment requested alignment in Bytes.
638
+ *
639
+ * There is also the variant first_aligned(const Scalar*, Integer) defined in Memory.h. See it for more
640
+ * documentation.
641
+ */
642
+ template<int Alignment, typename Derived>
643
+ static inline Index first_aligned(const DenseBase<Derived>& m)
644
+ {
645
+ enum { ReturnZero = (int(evaluator<Derived>::Alignment) >= Alignment) || !(Derived::Flags & DirectAccessBit) };
646
+ return first_aligned_impl<Alignment, Derived, ReturnZero>::run(m.derived());
647
+ }
648
+
649
+ template<typename Derived>
650
+ static inline Index first_default_aligned(const DenseBase<Derived>& m)
651
+ {
652
+ typedef typename Derived::Scalar Scalar;
653
+ typedef typename packet_traits<Scalar>::type DefaultPacketType;
654
+ return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
655
+ }
656
+
657
+ template<typename Derived, bool HasDirectAccess = has_direct_access<Derived>::ret>
658
+ struct inner_stride_at_compile_time
659
+ {
660
+ enum { ret = traits<Derived>::InnerStrideAtCompileTime };
661
+ };
662
+
663
+ template<typename Derived>
664
+ struct inner_stride_at_compile_time<Derived, false>
665
+ {
666
+ enum { ret = 0 };
667
+ };
668
+
669
+ template<typename Derived, bool HasDirectAccess = has_direct_access<Derived>::ret>
670
+ struct outer_stride_at_compile_time
671
+ {
672
+ enum { ret = traits<Derived>::OuterStrideAtCompileTime };
673
+ };
674
+
675
+ template<typename Derived>
676
+ struct outer_stride_at_compile_time<Derived, false>
677
+ {
678
+ enum { ret = 0 };
679
+ };
680
+
681
+ } // end namespace internal
682
+
683
+ } // end namespace Eigen
684
+
685
+ #endif // EIGEN_DENSECOEFFSBASE_H