umappp 0.1.2
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- checksums.yaml +7 -0
- data/LICENSE.txt +25 -0
- data/README.md +110 -0
- data/ext/umappp/extconf.rb +25 -0
- data/ext/umappp/numo.hpp +867 -0
- data/ext/umappp/umappp.cpp +225 -0
- data/lib/umappp/version.rb +5 -0
- data/lib/umappp.rb +41 -0
- data/vendor/Eigen/Cholesky +45 -0
- data/vendor/Eigen/CholmodSupport +48 -0
- data/vendor/Eigen/Core +384 -0
- data/vendor/Eigen/Dense +7 -0
- data/vendor/Eigen/Eigen +2 -0
- data/vendor/Eigen/Eigenvalues +60 -0
- data/vendor/Eigen/Geometry +59 -0
- data/vendor/Eigen/Householder +29 -0
- data/vendor/Eigen/IterativeLinearSolvers +48 -0
- data/vendor/Eigen/Jacobi +32 -0
- data/vendor/Eigen/KLUSupport +41 -0
- data/vendor/Eigen/LU +47 -0
- data/vendor/Eigen/MetisSupport +35 -0
- data/vendor/Eigen/OrderingMethods +70 -0
- data/vendor/Eigen/PaStiXSupport +49 -0
- data/vendor/Eigen/PardisoSupport +35 -0
- data/vendor/Eigen/QR +50 -0
- data/vendor/Eigen/QtAlignedMalloc +39 -0
- data/vendor/Eigen/SPQRSupport +34 -0
- data/vendor/Eigen/SVD +50 -0
- data/vendor/Eigen/Sparse +34 -0
- data/vendor/Eigen/SparseCholesky +37 -0
- data/vendor/Eigen/SparseCore +69 -0
- data/vendor/Eigen/SparseLU +50 -0
- data/vendor/Eigen/SparseQR +36 -0
- data/vendor/Eigen/StdDeque +27 -0
- data/vendor/Eigen/StdList +26 -0
- data/vendor/Eigen/StdVector +27 -0
- data/vendor/Eigen/SuperLUSupport +64 -0
- data/vendor/Eigen/UmfPackSupport +40 -0
- data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
- data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
- data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
- data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
- data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/Eigen/src/Core/Array.h +417 -0
- data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
- data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
- data/vendor/Eigen/src/Core/Assign.h +90 -0
- data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
- data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
- data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
- data/vendor/Eigen/src/Core/Block.h +448 -0
- data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
- data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
- data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
- data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
- data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
- data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
- data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
- data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
- data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
- data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
- data/vendor/Eigen/src/Core/DenseBase.h +701 -0
- data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
- data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
- data/vendor/Eigen/src/Core/Diagonal.h +258 -0
- data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
- data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
- data/vendor/Eigen/src/Core/Dot.h +318 -0
- data/vendor/Eigen/src/Core/EigenBase.h +160 -0
- data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
- data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
- data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
- data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
- data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
- data/vendor/Eigen/src/Core/IO.h +258 -0
- data/vendor/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/Eigen/src/Core/Inverse.h +117 -0
- data/vendor/Eigen/src/Core/Map.h +171 -0
- data/vendor/Eigen/src/Core/MapBase.h +310 -0
- data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
- data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
- data/vendor/Eigen/src/Core/Matrix.h +565 -0
- data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
- data/vendor/Eigen/src/Core/NestByValue.h +85 -0
- data/vendor/Eigen/src/Core/NoAlias.h +109 -0
- data/vendor/Eigen/src/Core/NumTraits.h +335 -0
- data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
- data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
- data/vendor/Eigen/src/Core/Product.h +191 -0
- data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
- data/vendor/Eigen/src/Core/Random.h +218 -0
- data/vendor/Eigen/src/Core/Redux.h +515 -0
- data/vendor/Eigen/src/Core/Ref.h +381 -0
- data/vendor/Eigen/src/Core/Replicate.h +142 -0
- data/vendor/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
- data/vendor/Eigen/src/Core/Reverse.h +217 -0
- data/vendor/Eigen/src/Core/Select.h +164 -0
- data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
- data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
- data/vendor/Eigen/src/Core/Solve.h +188 -0
- data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
- data/vendor/Eigen/src/Core/SolverBase.h +168 -0
- data/vendor/Eigen/src/Core/StableNorm.h +251 -0
- data/vendor/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/Eigen/src/Core/Stride.h +116 -0
- data/vendor/Eigen/src/Core/Swap.h +68 -0
- data/vendor/Eigen/src/Core/Transpose.h +464 -0
- data/vendor/Eigen/src/Core/Transpositions.h +386 -0
- data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
- data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
- data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
- data/vendor/Eigen/src/Core/Visitor.h +381 -0
- data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
- data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
- data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
- data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
- data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
- data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
- data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
- data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
- data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
- data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
- data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
- data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
- data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
- data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
- data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
- data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
- data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
- data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
- data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
- data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
- data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
- data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
- data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
- data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
- data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
- data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
- data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
- data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
- data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
- data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
- data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
- data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
- data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
- data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
- data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
- data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/Eigen/src/Core/util/Constants.h +563 -0
- data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
- data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
- data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
- data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
- data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
- data/vendor/Eigen/src/Core/util/Meta.h +812 -0
- data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
- data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
- data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
- data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
- data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
- data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
- data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
- data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
- data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
- data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
- data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
- data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
- data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
- data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
- data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
- data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
- data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
- data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
- data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
- data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
- data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
- data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
- data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
- data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
- data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
- data/vendor/Eigen/src/Geometry/Translation.h +202 -0
- data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
- data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
- data/vendor/Eigen/src/Householder/Householder.h +176 -0
- data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
- data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
- data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
- data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/Eigen/src/LU/Determinant.h +117 -0
- data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
- data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
- data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
- data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
- data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
- data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
- data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
- data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
- data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
- data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
- data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
- data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
- data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
- data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
- data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
- data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
- data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
- data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
- data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
- data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
- data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
- data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
- data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
- data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
- data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
- data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
- data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
- data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
- data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
- data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
- data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
- data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
- data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
- data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
- data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
- data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
- data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
- data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
- data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
- data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
- data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
- data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
- data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
- data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
- data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
- data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
- data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
- data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
- data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
- data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
- data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
- data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
- data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
- data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
- data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
- data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
- data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
- data/vendor/Eigen/src/StlSupport/details.h +84 -0
- data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
- data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
- data/vendor/Eigen/src/misc/Image.h +82 -0
- data/vendor/Eigen/src/misc/Kernel.h +79 -0
- data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
- data/vendor/Eigen/src/misc/blas.h +440 -0
- data/vendor/Eigen/src/misc/lapack.h +152 -0
- data/vendor/Eigen/src/misc/lapacke.h +16292 -0
- data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
- data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
- data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
- data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
- data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
- data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
- data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
- data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/aarand/aarand.hpp +114 -0
- data/vendor/annoy/annoylib.h +1495 -0
- data/vendor/annoy/kissrandom.h +120 -0
- data/vendor/annoy/mman.h +242 -0
- data/vendor/hnswlib/bruteforce.h +152 -0
- data/vendor/hnswlib/hnswalg.h +1192 -0
- data/vendor/hnswlib/hnswlib.h +108 -0
- data/vendor/hnswlib/space_ip.h +282 -0
- data/vendor/hnswlib/space_l2.h +281 -0
- data/vendor/hnswlib/visited_list_pool.h +79 -0
- data/vendor/irlba/irlba.hpp +575 -0
- data/vendor/irlba/lanczos.hpp +212 -0
- data/vendor/irlba/parallel.hpp +474 -0
- data/vendor/irlba/utils.hpp +224 -0
- data/vendor/irlba/wrappers.hpp +228 -0
- data/vendor/kmeans/Base.hpp +75 -0
- data/vendor/kmeans/Details.hpp +79 -0
- data/vendor/kmeans/HartiganWong.hpp +492 -0
- data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
- data/vendor/kmeans/InitializeNone.hpp +44 -0
- data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
- data/vendor/kmeans/InitializeRandom.hpp +91 -0
- data/vendor/kmeans/Kmeans.hpp +161 -0
- data/vendor/kmeans/Lloyd.hpp +134 -0
- data/vendor/kmeans/MiniBatch.hpp +269 -0
- data/vendor/kmeans/QuickSearch.hpp +179 -0
- data/vendor/kmeans/compute_centroids.hpp +32 -0
- data/vendor/kmeans/compute_wcss.hpp +27 -0
- data/vendor/kmeans/is_edge_case.hpp +42 -0
- data/vendor/kmeans/random.hpp +55 -0
- data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
- data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
- data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
- data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
- data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
- data/vendor/knncolle/knncolle.hpp +34 -0
- data/vendor/knncolle/utils/Base.hpp +100 -0
- data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
- data/vendor/knncolle/utils/distances.hpp +98 -0
- data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
- data/vendor/powerit/PowerIterations.hpp +157 -0
- data/vendor/umappp/NeighborList.hpp +37 -0
- data/vendor/umappp/Umap.hpp +662 -0
- data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
- data/vendor/umappp/find_ab.hpp +157 -0
- data/vendor/umappp/neighbor_similarities.hpp +136 -0
- data/vendor/umappp/optimize_layout.hpp +285 -0
- data/vendor/umappp/spectral_init.hpp +181 -0
- data/vendor/umappp/umappp.hpp +13 -0
- metadata +465 -0
@@ -0,0 +1,181 @@
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2008-2015 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_SPARSEPRODUCT_H
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#define EIGEN_SPARSEPRODUCT_H
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namespace Eigen {
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/** \returns an expression of the product of two sparse matrices.
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* By default a conservative product preserving the symbolic non zeros is performed.
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* The automatic pruning of the small values can be achieved by calling the pruned() function
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* in which case a totally different product algorithm is employed:
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* \code
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* C = (A*B).pruned(); // suppress numerical zeros (exact)
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* C = (A*B).pruned(ref);
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* C = (A*B).pruned(ref,epsilon);
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* \endcode
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* where \c ref is a meaningful non zero reference value.
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* */
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template<typename Derived>
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template<typename OtherDerived>
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inline const Product<Derived,OtherDerived,AliasFreeProduct>
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SparseMatrixBase<Derived>::operator*(const SparseMatrixBase<OtherDerived> &other) const
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{
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return Product<Derived,OtherDerived,AliasFreeProduct>(derived(), other.derived());
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}
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namespace internal {
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// sparse * sparse
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template<typename Lhs, typename Rhs, int ProductType>
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struct generic_product_impl<Lhs, Rhs, SparseShape, SparseShape, ProductType>
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{
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template<typename Dest>
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static void evalTo(Dest& dst, const Lhs& lhs, const Rhs& rhs)
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{
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evalTo(dst, lhs, rhs, typename evaluator_traits<Dest>::Shape());
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}
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// dense += sparse * sparse
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template<typename Dest,typename ActualLhs>
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static void addTo(Dest& dst, const ActualLhs& lhs, const Rhs& rhs, typename enable_if<is_same<typename evaluator_traits<Dest>::Shape,DenseShape>::value,int*>::type* = 0)
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{
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typedef typename nested_eval<ActualLhs,Dynamic>::type LhsNested;
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typedef typename nested_eval<Rhs,Dynamic>::type RhsNested;
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LhsNested lhsNested(lhs);
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RhsNested rhsNested(rhs);
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internal::sparse_sparse_to_dense_product_selector<typename remove_all<LhsNested>::type,
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typename remove_all<RhsNested>::type, Dest>::run(lhsNested,rhsNested,dst);
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}
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// dense -= sparse * sparse
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template<typename Dest>
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static void subTo(Dest& dst, const Lhs& lhs, const Rhs& rhs, typename enable_if<is_same<typename evaluator_traits<Dest>::Shape,DenseShape>::value,int*>::type* = 0)
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{
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addTo(dst, -lhs, rhs);
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}
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protected:
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// sparse = sparse * sparse
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template<typename Dest>
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static void evalTo(Dest& dst, const Lhs& lhs, const Rhs& rhs, SparseShape)
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{
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typedef typename nested_eval<Lhs,Dynamic>::type LhsNested;
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typedef typename nested_eval<Rhs,Dynamic>::type RhsNested;
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LhsNested lhsNested(lhs);
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RhsNested rhsNested(rhs);
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internal::conservative_sparse_sparse_product_selector<typename remove_all<LhsNested>::type,
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typename remove_all<RhsNested>::type, Dest>::run(lhsNested,rhsNested,dst);
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}
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// dense = sparse * sparse
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template<typename Dest>
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static void evalTo(Dest& dst, const Lhs& lhs, const Rhs& rhs, DenseShape)
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{
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dst.setZero();
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addTo(dst, lhs, rhs);
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}
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};
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// sparse * sparse-triangular
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template<typename Lhs, typename Rhs, int ProductType>
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struct generic_product_impl<Lhs, Rhs, SparseShape, SparseTriangularShape, ProductType>
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: public generic_product_impl<Lhs, Rhs, SparseShape, SparseShape, ProductType>
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{};
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// sparse-triangular * sparse
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template<typename Lhs, typename Rhs, int ProductType>
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struct generic_product_impl<Lhs, Rhs, SparseTriangularShape, SparseShape, ProductType>
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: public generic_product_impl<Lhs, Rhs, SparseShape, SparseShape, ProductType>
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{};
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// dense = sparse-product (can be sparse*sparse, sparse*perm, etc.)
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template< typename DstXprType, typename Lhs, typename Rhs>
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struct Assignment<DstXprType, Product<Lhs,Rhs,AliasFreeProduct>, internal::assign_op<typename DstXprType::Scalar,typename Product<Lhs,Rhs,AliasFreeProduct>::Scalar>, Sparse2Dense>
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{
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typedef Product<Lhs,Rhs,AliasFreeProduct> SrcXprType;
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static void run(DstXprType &dst, const SrcXprType &src, const internal::assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &)
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{
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Index dstRows = src.rows();
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Index dstCols = src.cols();
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if((dst.rows()!=dstRows) || (dst.cols()!=dstCols))
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dst.resize(dstRows, dstCols);
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generic_product_impl<Lhs, Rhs>::evalTo(dst,src.lhs(),src.rhs());
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}
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};
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// dense += sparse-product (can be sparse*sparse, sparse*perm, etc.)
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template< typename DstXprType, typename Lhs, typename Rhs>
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struct Assignment<DstXprType, Product<Lhs,Rhs,AliasFreeProduct>, internal::add_assign_op<typename DstXprType::Scalar,typename Product<Lhs,Rhs,AliasFreeProduct>::Scalar>, Sparse2Dense>
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{
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typedef Product<Lhs,Rhs,AliasFreeProduct> SrcXprType;
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static void run(DstXprType &dst, const SrcXprType &src, const internal::add_assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &)
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{
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generic_product_impl<Lhs, Rhs>::addTo(dst,src.lhs(),src.rhs());
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}
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};
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// dense -= sparse-product (can be sparse*sparse, sparse*perm, etc.)
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template< typename DstXprType, typename Lhs, typename Rhs>
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struct Assignment<DstXprType, Product<Lhs,Rhs,AliasFreeProduct>, internal::sub_assign_op<typename DstXprType::Scalar,typename Product<Lhs,Rhs,AliasFreeProduct>::Scalar>, Sparse2Dense>
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{
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typedef Product<Lhs,Rhs,AliasFreeProduct> SrcXprType;
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static void run(DstXprType &dst, const SrcXprType &src, const internal::sub_assign_op<typename DstXprType::Scalar,typename SrcXprType::Scalar> &)
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{
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generic_product_impl<Lhs, Rhs>::subTo(dst,src.lhs(),src.rhs());
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}
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};
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template<typename Lhs, typename Rhs, int Options>
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struct unary_evaluator<SparseView<Product<Lhs, Rhs, Options> >, IteratorBased>
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: public evaluator<typename Product<Lhs, Rhs, DefaultProduct>::PlainObject>
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{
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typedef SparseView<Product<Lhs, Rhs, Options> > XprType;
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typedef typename XprType::PlainObject PlainObject;
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typedef evaluator<PlainObject> Base;
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explicit unary_evaluator(const XprType& xpr)
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: m_result(xpr.rows(), xpr.cols())
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{
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using std::abs;
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::new (static_cast<Base*>(this)) Base(m_result);
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typedef typename nested_eval<Lhs,Dynamic>::type LhsNested;
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typedef typename nested_eval<Rhs,Dynamic>::type RhsNested;
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LhsNested lhsNested(xpr.nestedExpression().lhs());
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RhsNested rhsNested(xpr.nestedExpression().rhs());
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internal::sparse_sparse_product_with_pruning_selector<typename remove_all<LhsNested>::type,
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typename remove_all<RhsNested>::type, PlainObject>::run(lhsNested,rhsNested,m_result,
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abs(xpr.reference())*xpr.epsilon());
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}
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protected:
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PlainObject m_result;
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};
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} // end namespace internal
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// sparse matrix = sparse-product (can be sparse*sparse, sparse*perm, etc.)
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template<typename Scalar, int _Options, typename _StorageIndex>
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template<typename Lhs, typename Rhs>
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SparseMatrix<Scalar,_Options,_StorageIndex>& SparseMatrix<Scalar,_Options,_StorageIndex>::operator=(const Product<Lhs,Rhs,AliasFreeProduct>& src)
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{
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172
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// std::cout << "in Assignment : " << DstOptions << "\n";
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SparseMatrix dst(src.rows(),src.cols());
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internal::generic_product_impl<Lhs, Rhs>::evalTo(dst,src.lhs(),src.rhs());
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this->swap(dst);
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return *this;
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}
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} // end namespace Eigen
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#endif // EIGEN_SPARSEPRODUCT_H
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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4
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// Copyright (C) 2008-2014 Gael Guennebaud <gael.guennebaud@inria.fr>
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//
|
6
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// This Source Code Form is subject to the terms of the Mozilla
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7
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// Public License v. 2.0. If a copy of the MPL was not distributed
|
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
|
9
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|
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#ifndef EIGEN_SPARSEREDUX_H
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#define EIGEN_SPARSEREDUX_H
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|
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namespace Eigen {
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template<typename Derived>
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typename internal::traits<Derived>::Scalar
|
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SparseMatrixBase<Derived>::sum() const
|
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{
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eigen_assert(rows()>0 && cols()>0 && "you are using a non initialized matrix");
|
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Scalar res(0);
|
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internal::evaluator<Derived> thisEval(derived());
|
22
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for (Index j=0; j<outerSize(); ++j)
|
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for (typename internal::evaluator<Derived>::InnerIterator iter(thisEval,j); iter; ++iter)
|
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res += iter.value();
|
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return res;
|
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}
|
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|
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template<typename _Scalar, int _Options, typename _Index>
|
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typename internal::traits<SparseMatrix<_Scalar,_Options,_Index> >::Scalar
|
30
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SparseMatrix<_Scalar,_Options,_Index>::sum() const
|
31
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{
|
32
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eigen_assert(rows()>0 && cols()>0 && "you are using a non initialized matrix");
|
33
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if(this->isCompressed())
|
34
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return Matrix<Scalar,1,Dynamic>::Map(m_data.valuePtr(), m_data.size()).sum();
|
35
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else
|
36
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return Base::sum();
|
37
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}
|
38
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+
|
39
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template<typename _Scalar, int _Options, typename _Index>
|
40
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typename internal::traits<SparseVector<_Scalar,_Options, _Index> >::Scalar
|
41
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SparseVector<_Scalar,_Options,_Index>::sum() const
|
42
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{
|
43
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eigen_assert(rows()>0 && cols()>0 && "you are using a non initialized matrix");
|
44
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return Matrix<Scalar,1,Dynamic>::Map(m_data.valuePtr(), m_data.size()).sum();
|
45
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}
|
46
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|
47
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} // end namespace Eigen
|
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|
49
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#endif // EIGEN_SPARSEREDUX_H
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1
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// This file is part of Eigen, a lightweight C++ template library
|
2
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// for linear algebra.
|
3
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//
|
4
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// Copyright (C) 2015 Gael Guennebaud <gael.guennebaud@inria.fr>
|
5
|
+
//
|
6
|
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// This Source Code Form is subject to the terms of the Mozilla
|
7
|
+
// Public License v. 2.0. If a copy of the MPL was not distributed
|
8
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+
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
|
9
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|
10
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#ifndef EIGEN_SPARSE_REF_H
|
11
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#define EIGEN_SPARSE_REF_H
|
12
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|
13
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namespace Eigen {
|
14
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|
15
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enum {
|
16
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StandardCompressedFormat = 2 /**< used by Ref<SparseMatrix> to specify whether the input storage must be in standard compressed form */
|
17
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+
};
|
18
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+
|
19
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namespace internal {
|
20
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+
|
21
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template<typename Derived> class SparseRefBase;
|
22
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+
|
23
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int _Options, typename _StrideType>
|
24
|
+
struct traits<Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, _Options, _StrideType> >
|
25
|
+
: public traits<SparseMatrix<MatScalar,MatOptions,MatIndex> >
|
26
|
+
{
|
27
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+
typedef SparseMatrix<MatScalar,MatOptions,MatIndex> PlainObjectType;
|
28
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+
enum {
|
29
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+
Options = _Options,
|
30
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+
Flags = traits<PlainObjectType>::Flags | CompressedAccessBit | NestByRefBit
|
31
|
+
};
|
32
|
+
|
33
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+
template<typename Derived> struct match {
|
34
|
+
enum {
|
35
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+
StorageOrderMatch = PlainObjectType::IsVectorAtCompileTime || Derived::IsVectorAtCompileTime || ((PlainObjectType::Flags&RowMajorBit)==(Derived::Flags&RowMajorBit)),
|
36
|
+
MatchAtCompileTime = (Derived::Flags&CompressedAccessBit) && StorageOrderMatch
|
37
|
+
};
|
38
|
+
typedef typename internal::conditional<MatchAtCompileTime,internal::true_type,internal::false_type>::type type;
|
39
|
+
};
|
40
|
+
|
41
|
+
};
|
42
|
+
|
43
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int _Options, typename _StrideType>
|
44
|
+
struct traits<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, _Options, _StrideType> >
|
45
|
+
: public traits<Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, _Options, _StrideType> >
|
46
|
+
{
|
47
|
+
enum {
|
48
|
+
Flags = (traits<SparseMatrix<MatScalar,MatOptions,MatIndex> >::Flags | CompressedAccessBit | NestByRefBit) & ~LvalueBit
|
49
|
+
};
|
50
|
+
};
|
51
|
+
|
52
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int _Options, typename _StrideType>
|
53
|
+
struct traits<Ref<SparseVector<MatScalar,MatOptions,MatIndex>, _Options, _StrideType> >
|
54
|
+
: public traits<SparseVector<MatScalar,MatOptions,MatIndex> >
|
55
|
+
{
|
56
|
+
typedef SparseVector<MatScalar,MatOptions,MatIndex> PlainObjectType;
|
57
|
+
enum {
|
58
|
+
Options = _Options,
|
59
|
+
Flags = traits<PlainObjectType>::Flags | CompressedAccessBit | NestByRefBit
|
60
|
+
};
|
61
|
+
|
62
|
+
template<typename Derived> struct match {
|
63
|
+
enum {
|
64
|
+
MatchAtCompileTime = (Derived::Flags&CompressedAccessBit) && Derived::IsVectorAtCompileTime
|
65
|
+
};
|
66
|
+
typedef typename internal::conditional<MatchAtCompileTime,internal::true_type,internal::false_type>::type type;
|
67
|
+
};
|
68
|
+
|
69
|
+
};
|
70
|
+
|
71
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int _Options, typename _StrideType>
|
72
|
+
struct traits<Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, _Options, _StrideType> >
|
73
|
+
: public traits<Ref<SparseVector<MatScalar,MatOptions,MatIndex>, _Options, _StrideType> >
|
74
|
+
{
|
75
|
+
enum {
|
76
|
+
Flags = (traits<SparseVector<MatScalar,MatOptions,MatIndex> >::Flags | CompressedAccessBit | NestByRefBit) & ~LvalueBit
|
77
|
+
};
|
78
|
+
};
|
79
|
+
|
80
|
+
template<typename Derived>
|
81
|
+
struct traits<SparseRefBase<Derived> > : public traits<Derived> {};
|
82
|
+
|
83
|
+
template<typename Derived> class SparseRefBase
|
84
|
+
: public SparseMapBase<Derived>
|
85
|
+
{
|
86
|
+
public:
|
87
|
+
|
88
|
+
typedef SparseMapBase<Derived> Base;
|
89
|
+
EIGEN_SPARSE_PUBLIC_INTERFACE(SparseRefBase)
|
90
|
+
|
91
|
+
SparseRefBase()
|
92
|
+
: Base(RowsAtCompileTime==Dynamic?0:RowsAtCompileTime,ColsAtCompileTime==Dynamic?0:ColsAtCompileTime, 0, 0, 0, 0, 0)
|
93
|
+
{}
|
94
|
+
|
95
|
+
protected:
|
96
|
+
|
97
|
+
template<typename Expression>
|
98
|
+
void construct(Expression& expr)
|
99
|
+
{
|
100
|
+
if(expr.outerIndexPtr()==0)
|
101
|
+
::new (static_cast<Base*>(this)) Base(expr.size(), expr.nonZeros(), expr.innerIndexPtr(), expr.valuePtr());
|
102
|
+
else
|
103
|
+
::new (static_cast<Base*>(this)) Base(expr.rows(), expr.cols(), expr.nonZeros(), expr.outerIndexPtr(), expr.innerIndexPtr(), expr.valuePtr(), expr.innerNonZeroPtr());
|
104
|
+
}
|
105
|
+
};
|
106
|
+
|
107
|
+
} // namespace internal
|
108
|
+
|
109
|
+
|
110
|
+
/**
|
111
|
+
* \ingroup SparseCore_Module
|
112
|
+
*
|
113
|
+
* \brief A sparse matrix expression referencing an existing sparse expression
|
114
|
+
*
|
115
|
+
* \tparam SparseMatrixType the equivalent sparse matrix type of the referenced data, it must be a template instance of class SparseMatrix.
|
116
|
+
* \tparam Options specifies whether the a standard compressed format is required \c Options is \c #StandardCompressedFormat, or \c 0.
|
117
|
+
* The default is \c 0.
|
118
|
+
*
|
119
|
+
* \sa class Ref
|
120
|
+
*/
|
121
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
122
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
123
|
+
class Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType >
|
124
|
+
: public internal::SparseRefBase<Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType > >
|
125
|
+
#else
|
126
|
+
template<typename SparseMatrixType, int Options>
|
127
|
+
class Ref<SparseMatrixType, Options>
|
128
|
+
: public SparseMapBase<Derived,WriteAccessors> // yes, that's weird to use Derived here, but that works!
|
129
|
+
#endif
|
130
|
+
{
|
131
|
+
typedef SparseMatrix<MatScalar,MatOptions,MatIndex> PlainObjectType;
|
132
|
+
typedef internal::traits<Ref> Traits;
|
133
|
+
template<int OtherOptions>
|
134
|
+
inline Ref(const SparseMatrix<MatScalar,OtherOptions,MatIndex>& expr);
|
135
|
+
template<int OtherOptions>
|
136
|
+
inline Ref(const MappedSparseMatrix<MatScalar,OtherOptions,MatIndex>& expr);
|
137
|
+
public:
|
138
|
+
|
139
|
+
typedef internal::SparseRefBase<Ref> Base;
|
140
|
+
EIGEN_SPARSE_PUBLIC_INTERFACE(Ref)
|
141
|
+
|
142
|
+
|
143
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
144
|
+
template<int OtherOptions>
|
145
|
+
inline Ref(SparseMatrix<MatScalar,OtherOptions,MatIndex>& expr)
|
146
|
+
{
|
147
|
+
EIGEN_STATIC_ASSERT(bool(Traits::template match<SparseMatrix<MatScalar,OtherOptions,MatIndex> >::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
|
148
|
+
eigen_assert( ((Options & int(StandardCompressedFormat))==0) || (expr.isCompressed()) );
|
149
|
+
Base::construct(expr.derived());
|
150
|
+
}
|
151
|
+
|
152
|
+
template<int OtherOptions>
|
153
|
+
inline Ref(MappedSparseMatrix<MatScalar,OtherOptions,MatIndex>& expr)
|
154
|
+
{
|
155
|
+
EIGEN_STATIC_ASSERT(bool(Traits::template match<SparseMatrix<MatScalar,OtherOptions,MatIndex> >::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
|
156
|
+
eigen_assert( ((Options & int(StandardCompressedFormat))==0) || (expr.isCompressed()) );
|
157
|
+
Base::construct(expr.derived());
|
158
|
+
}
|
159
|
+
|
160
|
+
template<typename Derived>
|
161
|
+
inline Ref(const SparseCompressedBase<Derived>& expr)
|
162
|
+
#else
|
163
|
+
/** Implicit constructor from any sparse expression (2D matrix or 1D vector) */
|
164
|
+
template<typename Derived>
|
165
|
+
inline Ref(SparseCompressedBase<Derived>& expr)
|
166
|
+
#endif
|
167
|
+
{
|
168
|
+
EIGEN_STATIC_ASSERT(bool(internal::is_lvalue<Derived>::value), THIS_EXPRESSION_IS_NOT_A_LVALUE__IT_IS_READ_ONLY);
|
169
|
+
EIGEN_STATIC_ASSERT(bool(Traits::template match<Derived>::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
|
170
|
+
eigen_assert( ((Options & int(StandardCompressedFormat))==0) || (expr.isCompressed()) );
|
171
|
+
Base::construct(expr.const_cast_derived());
|
172
|
+
}
|
173
|
+
};
|
174
|
+
|
175
|
+
// this is the const ref version
|
176
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
177
|
+
class Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType>
|
178
|
+
: public internal::SparseRefBase<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
|
179
|
+
{
|
180
|
+
typedef SparseMatrix<MatScalar,MatOptions,MatIndex> TPlainObjectType;
|
181
|
+
typedef internal::traits<Ref> Traits;
|
182
|
+
public:
|
183
|
+
|
184
|
+
typedef internal::SparseRefBase<Ref> Base;
|
185
|
+
EIGEN_SPARSE_PUBLIC_INTERFACE(Ref)
|
186
|
+
|
187
|
+
template<typename Derived>
|
188
|
+
inline Ref(const SparseMatrixBase<Derived>& expr) : m_hasCopy(false)
|
189
|
+
{
|
190
|
+
construct(expr.derived(), typename Traits::template match<Derived>::type());
|
191
|
+
}
|
192
|
+
|
193
|
+
inline Ref(const Ref& other) : Base(other), m_hasCopy(false) {
|
194
|
+
// copy constructor shall not copy the m_object, to avoid unnecessary malloc and copy
|
195
|
+
}
|
196
|
+
|
197
|
+
template<typename OtherRef>
|
198
|
+
inline Ref(const RefBase<OtherRef>& other) : m_hasCopy(false) {
|
199
|
+
construct(other.derived(), typename Traits::template match<OtherRef>::type());
|
200
|
+
}
|
201
|
+
|
202
|
+
~Ref() {
|
203
|
+
if(m_hasCopy) {
|
204
|
+
TPlainObjectType* obj = reinterpret_cast<TPlainObjectType*>(&m_storage);
|
205
|
+
obj->~TPlainObjectType();
|
206
|
+
}
|
207
|
+
}
|
208
|
+
|
209
|
+
protected:
|
210
|
+
|
211
|
+
template<typename Expression>
|
212
|
+
void construct(const Expression& expr,internal::true_type)
|
213
|
+
{
|
214
|
+
if((Options & int(StandardCompressedFormat)) && (!expr.isCompressed()))
|
215
|
+
{
|
216
|
+
TPlainObjectType* obj = reinterpret_cast<TPlainObjectType*>(&m_storage);
|
217
|
+
::new (obj) TPlainObjectType(expr);
|
218
|
+
m_hasCopy = true;
|
219
|
+
Base::construct(*obj);
|
220
|
+
}
|
221
|
+
else
|
222
|
+
{
|
223
|
+
Base::construct(expr);
|
224
|
+
}
|
225
|
+
}
|
226
|
+
|
227
|
+
template<typename Expression>
|
228
|
+
void construct(const Expression& expr, internal::false_type)
|
229
|
+
{
|
230
|
+
TPlainObjectType* obj = reinterpret_cast<TPlainObjectType*>(&m_storage);
|
231
|
+
::new (obj) TPlainObjectType(expr);
|
232
|
+
m_hasCopy = true;
|
233
|
+
Base::construct(*obj);
|
234
|
+
}
|
235
|
+
|
236
|
+
protected:
|
237
|
+
typename internal::aligned_storage<sizeof(TPlainObjectType), EIGEN_ALIGNOF(TPlainObjectType)>::type m_storage;
|
238
|
+
bool m_hasCopy;
|
239
|
+
};
|
240
|
+
|
241
|
+
|
242
|
+
|
243
|
+
/**
|
244
|
+
* \ingroup SparseCore_Module
|
245
|
+
*
|
246
|
+
* \brief A sparse vector expression referencing an existing sparse vector expression
|
247
|
+
*
|
248
|
+
* \tparam SparseVectorType the equivalent sparse vector type of the referenced data, it must be a template instance of class SparseVector.
|
249
|
+
*
|
250
|
+
* \sa class Ref
|
251
|
+
*/
|
252
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
253
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
254
|
+
class Ref<SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType >
|
255
|
+
: public internal::SparseRefBase<Ref<SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType > >
|
256
|
+
#else
|
257
|
+
template<typename SparseVectorType>
|
258
|
+
class Ref<SparseVectorType>
|
259
|
+
: public SparseMapBase<Derived,WriteAccessors>
|
260
|
+
#endif
|
261
|
+
{
|
262
|
+
typedef SparseVector<MatScalar,MatOptions,MatIndex> PlainObjectType;
|
263
|
+
typedef internal::traits<Ref> Traits;
|
264
|
+
template<int OtherOptions>
|
265
|
+
inline Ref(const SparseVector<MatScalar,OtherOptions,MatIndex>& expr);
|
266
|
+
public:
|
267
|
+
|
268
|
+
typedef internal::SparseRefBase<Ref> Base;
|
269
|
+
EIGEN_SPARSE_PUBLIC_INTERFACE(Ref)
|
270
|
+
|
271
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
272
|
+
template<int OtherOptions>
|
273
|
+
inline Ref(SparseVector<MatScalar,OtherOptions,MatIndex>& expr)
|
274
|
+
{
|
275
|
+
EIGEN_STATIC_ASSERT(bool(Traits::template match<SparseVector<MatScalar,OtherOptions,MatIndex> >::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
|
276
|
+
Base::construct(expr.derived());
|
277
|
+
}
|
278
|
+
|
279
|
+
template<typename Derived>
|
280
|
+
inline Ref(const SparseCompressedBase<Derived>& expr)
|
281
|
+
#else
|
282
|
+
/** Implicit constructor from any 1D sparse vector expression */
|
283
|
+
template<typename Derived>
|
284
|
+
inline Ref(SparseCompressedBase<Derived>& expr)
|
285
|
+
#endif
|
286
|
+
{
|
287
|
+
EIGEN_STATIC_ASSERT(bool(internal::is_lvalue<Derived>::value), THIS_EXPRESSION_IS_NOT_A_LVALUE__IT_IS_READ_ONLY);
|
288
|
+
EIGEN_STATIC_ASSERT(bool(Traits::template match<Derived>::MatchAtCompileTime), STORAGE_LAYOUT_DOES_NOT_MATCH);
|
289
|
+
Base::construct(expr.const_cast_derived());
|
290
|
+
}
|
291
|
+
};
|
292
|
+
|
293
|
+
// this is the const ref version
|
294
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
295
|
+
class Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType>
|
296
|
+
: public internal::SparseRefBase<Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
|
297
|
+
{
|
298
|
+
typedef SparseVector<MatScalar,MatOptions,MatIndex> TPlainObjectType;
|
299
|
+
typedef internal::traits<Ref> Traits;
|
300
|
+
public:
|
301
|
+
|
302
|
+
typedef internal::SparseRefBase<Ref> Base;
|
303
|
+
EIGEN_SPARSE_PUBLIC_INTERFACE(Ref)
|
304
|
+
|
305
|
+
template<typename Derived>
|
306
|
+
inline Ref(const SparseMatrixBase<Derived>& expr) : m_hasCopy(false)
|
307
|
+
{
|
308
|
+
construct(expr.derived(), typename Traits::template match<Derived>::type());
|
309
|
+
}
|
310
|
+
|
311
|
+
inline Ref(const Ref& other) : Base(other), m_hasCopy(false) {
|
312
|
+
// copy constructor shall not copy the m_object, to avoid unnecessary malloc and copy
|
313
|
+
}
|
314
|
+
|
315
|
+
template<typename OtherRef>
|
316
|
+
inline Ref(const RefBase<OtherRef>& other) : m_hasCopy(false) {
|
317
|
+
construct(other.derived(), typename Traits::template match<OtherRef>::type());
|
318
|
+
}
|
319
|
+
|
320
|
+
~Ref() {
|
321
|
+
if(m_hasCopy) {
|
322
|
+
TPlainObjectType* obj = reinterpret_cast<TPlainObjectType*>(&m_storage);
|
323
|
+
obj->~TPlainObjectType();
|
324
|
+
}
|
325
|
+
}
|
326
|
+
|
327
|
+
protected:
|
328
|
+
|
329
|
+
template<typename Expression>
|
330
|
+
void construct(const Expression& expr,internal::true_type)
|
331
|
+
{
|
332
|
+
Base::construct(expr);
|
333
|
+
}
|
334
|
+
|
335
|
+
template<typename Expression>
|
336
|
+
void construct(const Expression& expr, internal::false_type)
|
337
|
+
{
|
338
|
+
TPlainObjectType* obj = reinterpret_cast<TPlainObjectType*>(&m_storage);
|
339
|
+
::new (obj) TPlainObjectType(expr);
|
340
|
+
m_hasCopy = true;
|
341
|
+
Base::construct(*obj);
|
342
|
+
}
|
343
|
+
|
344
|
+
protected:
|
345
|
+
typename internal::aligned_storage<sizeof(TPlainObjectType), EIGEN_ALIGNOF(TPlainObjectType)>::type m_storage;
|
346
|
+
bool m_hasCopy;
|
347
|
+
};
|
348
|
+
|
349
|
+
namespace internal {
|
350
|
+
|
351
|
+
// FIXME shall we introduce a general evaluatior_ref that we can specialize for any sparse object once, and thus remove this copy-pasta thing...
|
352
|
+
|
353
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
354
|
+
struct evaluator<Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
|
355
|
+
: evaluator<SparseCompressedBase<Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> > >
|
356
|
+
{
|
357
|
+
typedef evaluator<SparseCompressedBase<Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> > > Base;
|
358
|
+
typedef Ref<SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> XprType;
|
359
|
+
evaluator() : Base() {}
|
360
|
+
explicit evaluator(const XprType &mat) : Base(mat) {}
|
361
|
+
};
|
362
|
+
|
363
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
364
|
+
struct evaluator<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
|
365
|
+
: evaluator<SparseCompressedBase<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> > >
|
366
|
+
{
|
367
|
+
typedef evaluator<SparseCompressedBase<Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> > > Base;
|
368
|
+
typedef Ref<const SparseMatrix<MatScalar,MatOptions,MatIndex>, Options, StrideType> XprType;
|
369
|
+
evaluator() : Base() {}
|
370
|
+
explicit evaluator(const XprType &mat) : Base(mat) {}
|
371
|
+
};
|
372
|
+
|
373
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
374
|
+
struct evaluator<Ref<SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
|
375
|
+
: evaluator<SparseCompressedBase<Ref<SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> > >
|
376
|
+
{
|
377
|
+
typedef evaluator<SparseCompressedBase<Ref<SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> > > Base;
|
378
|
+
typedef Ref<SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> XprType;
|
379
|
+
evaluator() : Base() {}
|
380
|
+
explicit evaluator(const XprType &mat) : Base(mat) {}
|
381
|
+
};
|
382
|
+
|
383
|
+
template<typename MatScalar, int MatOptions, typename MatIndex, int Options, typename StrideType>
|
384
|
+
struct evaluator<Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> >
|
385
|
+
: evaluator<SparseCompressedBase<Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> > >
|
386
|
+
{
|
387
|
+
typedef evaluator<SparseCompressedBase<Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> > > Base;
|
388
|
+
typedef Ref<const SparseVector<MatScalar,MatOptions,MatIndex>, Options, StrideType> XprType;
|
389
|
+
evaluator() : Base() {}
|
390
|
+
explicit evaluator(const XprType &mat) : Base(mat) {}
|
391
|
+
};
|
392
|
+
|
393
|
+
}
|
394
|
+
|
395
|
+
} // end namespace Eigen
|
396
|
+
|
397
|
+
#endif // EIGEN_SPARSE_REF_H
|