umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,515 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ // Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
6
+ //
7
+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
10
+
11
+ #ifndef EIGEN_REDUX_H
12
+ #define EIGEN_REDUX_H
13
+
14
+ namespace Eigen {
15
+
16
+ namespace internal {
17
+
18
+ // TODO
19
+ // * implement other kind of vectorization
20
+ // * factorize code
21
+
22
+ /***************************************************************************
23
+ * Part 1 : the logic deciding a strategy for vectorization and unrolling
24
+ ***************************************************************************/
25
+
26
+ template<typename Func, typename Evaluator>
27
+ struct redux_traits
28
+ {
29
+ public:
30
+ typedef typename find_best_packet<typename Evaluator::Scalar,Evaluator::SizeAtCompileTime>::type PacketType;
31
+ enum {
32
+ PacketSize = unpacket_traits<PacketType>::size,
33
+ InnerMaxSize = int(Evaluator::IsRowMajor)
34
+ ? Evaluator::MaxColsAtCompileTime
35
+ : Evaluator::MaxRowsAtCompileTime,
36
+ OuterMaxSize = int(Evaluator::IsRowMajor)
37
+ ? Evaluator::MaxRowsAtCompileTime
38
+ : Evaluator::MaxColsAtCompileTime,
39
+ SliceVectorizedWork = int(InnerMaxSize)==Dynamic ? Dynamic
40
+ : int(OuterMaxSize)==Dynamic ? (int(InnerMaxSize)>=int(PacketSize) ? Dynamic : 0)
41
+ : (int(InnerMaxSize)/int(PacketSize)) * int(OuterMaxSize)
42
+ };
43
+
44
+ enum {
45
+ MightVectorize = (int(Evaluator::Flags)&ActualPacketAccessBit)
46
+ && (functor_traits<Func>::PacketAccess),
47
+ MayLinearVectorize = bool(MightVectorize) && (int(Evaluator::Flags)&LinearAccessBit),
48
+ MaySliceVectorize = bool(MightVectorize) && (int(SliceVectorizedWork)==Dynamic || int(SliceVectorizedWork)>=3)
49
+ };
50
+
51
+ public:
52
+ enum {
53
+ Traversal = int(MayLinearVectorize) ? int(LinearVectorizedTraversal)
54
+ : int(MaySliceVectorize) ? int(SliceVectorizedTraversal)
55
+ : int(DefaultTraversal)
56
+ };
57
+
58
+ public:
59
+ enum {
60
+ Cost = Evaluator::SizeAtCompileTime == Dynamic ? HugeCost
61
+ : int(Evaluator::SizeAtCompileTime) * int(Evaluator::CoeffReadCost) + (Evaluator::SizeAtCompileTime-1) * functor_traits<Func>::Cost,
62
+ UnrollingLimit = EIGEN_UNROLLING_LIMIT * (int(Traversal) == int(DefaultTraversal) ? 1 : int(PacketSize))
63
+ };
64
+
65
+ public:
66
+ enum {
67
+ Unrolling = Cost <= UnrollingLimit ? CompleteUnrolling : NoUnrolling
68
+ };
69
+
70
+ #ifdef EIGEN_DEBUG_ASSIGN
71
+ static void debug()
72
+ {
73
+ std::cerr << "Xpr: " << typeid(typename Evaluator::XprType).name() << std::endl;
74
+ std::cerr.setf(std::ios::hex, std::ios::basefield);
75
+ EIGEN_DEBUG_VAR(Evaluator::Flags)
76
+ std::cerr.unsetf(std::ios::hex);
77
+ EIGEN_DEBUG_VAR(InnerMaxSize)
78
+ EIGEN_DEBUG_VAR(OuterMaxSize)
79
+ EIGEN_DEBUG_VAR(SliceVectorizedWork)
80
+ EIGEN_DEBUG_VAR(PacketSize)
81
+ EIGEN_DEBUG_VAR(MightVectorize)
82
+ EIGEN_DEBUG_VAR(MayLinearVectorize)
83
+ EIGEN_DEBUG_VAR(MaySliceVectorize)
84
+ std::cerr << "Traversal" << " = " << Traversal << " (" << demangle_traversal(Traversal) << ")" << std::endl;
85
+ EIGEN_DEBUG_VAR(UnrollingLimit)
86
+ std::cerr << "Unrolling" << " = " << Unrolling << " (" << demangle_unrolling(Unrolling) << ")" << std::endl;
87
+ std::cerr << std::endl;
88
+ }
89
+ #endif
90
+ };
91
+
92
+ /***************************************************************************
93
+ * Part 2 : unrollers
94
+ ***************************************************************************/
95
+
96
+ /*** no vectorization ***/
97
+
98
+ template<typename Func, typename Evaluator, int Start, int Length>
99
+ struct redux_novec_unroller
100
+ {
101
+ enum {
102
+ HalfLength = Length/2
103
+ };
104
+
105
+ typedef typename Evaluator::Scalar Scalar;
106
+
107
+ EIGEN_DEVICE_FUNC
108
+ static EIGEN_STRONG_INLINE Scalar run(const Evaluator &eval, const Func& func)
109
+ {
110
+ return func(redux_novec_unroller<Func, Evaluator, Start, HalfLength>::run(eval,func),
111
+ redux_novec_unroller<Func, Evaluator, Start+HalfLength, Length-HalfLength>::run(eval,func));
112
+ }
113
+ };
114
+
115
+ template<typename Func, typename Evaluator, int Start>
116
+ struct redux_novec_unroller<Func, Evaluator, Start, 1>
117
+ {
118
+ enum {
119
+ outer = Start / Evaluator::InnerSizeAtCompileTime,
120
+ inner = Start % Evaluator::InnerSizeAtCompileTime
121
+ };
122
+
123
+ typedef typename Evaluator::Scalar Scalar;
124
+
125
+ EIGEN_DEVICE_FUNC
126
+ static EIGEN_STRONG_INLINE Scalar run(const Evaluator &eval, const Func&)
127
+ {
128
+ return eval.coeffByOuterInner(outer, inner);
129
+ }
130
+ };
131
+
132
+ // This is actually dead code and will never be called. It is required
133
+ // to prevent false warnings regarding failed inlining though
134
+ // for 0 length run() will never be called at all.
135
+ template<typename Func, typename Evaluator, int Start>
136
+ struct redux_novec_unroller<Func, Evaluator, Start, 0>
137
+ {
138
+ typedef typename Evaluator::Scalar Scalar;
139
+ EIGEN_DEVICE_FUNC
140
+ static EIGEN_STRONG_INLINE Scalar run(const Evaluator&, const Func&) { return Scalar(); }
141
+ };
142
+
143
+ /*** vectorization ***/
144
+
145
+ template<typename Func, typename Evaluator, int Start, int Length>
146
+ struct redux_vec_unroller
147
+ {
148
+ template<typename PacketType>
149
+ EIGEN_DEVICE_FUNC
150
+ static EIGEN_STRONG_INLINE PacketType run(const Evaluator &eval, const Func& func)
151
+ {
152
+ enum {
153
+ PacketSize = unpacket_traits<PacketType>::size,
154
+ HalfLength = Length/2
155
+ };
156
+
157
+ return func.packetOp(
158
+ redux_vec_unroller<Func, Evaluator, Start, HalfLength>::template run<PacketType>(eval,func),
159
+ redux_vec_unroller<Func, Evaluator, Start+HalfLength, Length-HalfLength>::template run<PacketType>(eval,func) );
160
+ }
161
+ };
162
+
163
+ template<typename Func, typename Evaluator, int Start>
164
+ struct redux_vec_unroller<Func, Evaluator, Start, 1>
165
+ {
166
+ template<typename PacketType>
167
+ EIGEN_DEVICE_FUNC
168
+ static EIGEN_STRONG_INLINE PacketType run(const Evaluator &eval, const Func&)
169
+ {
170
+ enum {
171
+ PacketSize = unpacket_traits<PacketType>::size,
172
+ index = Start * PacketSize,
173
+ outer = index / int(Evaluator::InnerSizeAtCompileTime),
174
+ inner = index % int(Evaluator::InnerSizeAtCompileTime),
175
+ alignment = Evaluator::Alignment
176
+ };
177
+ return eval.template packetByOuterInner<alignment,PacketType>(outer, inner);
178
+ }
179
+ };
180
+
181
+ /***************************************************************************
182
+ * Part 3 : implementation of all cases
183
+ ***************************************************************************/
184
+
185
+ template<typename Func, typename Evaluator,
186
+ int Traversal = redux_traits<Func, Evaluator>::Traversal,
187
+ int Unrolling = redux_traits<Func, Evaluator>::Unrolling
188
+ >
189
+ struct redux_impl;
190
+
191
+ template<typename Func, typename Evaluator>
192
+ struct redux_impl<Func, Evaluator, DefaultTraversal, NoUnrolling>
193
+ {
194
+ typedef typename Evaluator::Scalar Scalar;
195
+
196
+ template<typename XprType>
197
+ EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE
198
+ Scalar run(const Evaluator &eval, const Func& func, const XprType& xpr)
199
+ {
200
+ eigen_assert(xpr.rows()>0 && xpr.cols()>0 && "you are using an empty matrix");
201
+ Scalar res;
202
+ res = eval.coeffByOuterInner(0, 0);
203
+ for(Index i = 1; i < xpr.innerSize(); ++i)
204
+ res = func(res, eval.coeffByOuterInner(0, i));
205
+ for(Index i = 1; i < xpr.outerSize(); ++i)
206
+ for(Index j = 0; j < xpr.innerSize(); ++j)
207
+ res = func(res, eval.coeffByOuterInner(i, j));
208
+ return res;
209
+ }
210
+ };
211
+
212
+ template<typename Func, typename Evaluator>
213
+ struct redux_impl<Func,Evaluator, DefaultTraversal, CompleteUnrolling>
214
+ : redux_novec_unroller<Func,Evaluator, 0, Evaluator::SizeAtCompileTime>
215
+ {
216
+ typedef redux_novec_unroller<Func,Evaluator, 0, Evaluator::SizeAtCompileTime> Base;
217
+ typedef typename Evaluator::Scalar Scalar;
218
+ template<typename XprType>
219
+ EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE
220
+ Scalar run(const Evaluator &eval, const Func& func, const XprType& /*xpr*/)
221
+ {
222
+ return Base::run(eval,func);
223
+ }
224
+ };
225
+
226
+ template<typename Func, typename Evaluator>
227
+ struct redux_impl<Func, Evaluator, LinearVectorizedTraversal, NoUnrolling>
228
+ {
229
+ typedef typename Evaluator::Scalar Scalar;
230
+ typedef typename redux_traits<Func, Evaluator>::PacketType PacketScalar;
231
+
232
+ template<typename XprType>
233
+ static Scalar run(const Evaluator &eval, const Func& func, const XprType& xpr)
234
+ {
235
+ const Index size = xpr.size();
236
+
237
+ const Index packetSize = redux_traits<Func, Evaluator>::PacketSize;
238
+ const int packetAlignment = unpacket_traits<PacketScalar>::alignment;
239
+ enum {
240
+ alignment0 = (bool(Evaluator::Flags & DirectAccessBit) && bool(packet_traits<Scalar>::AlignedOnScalar)) ? int(packetAlignment) : int(Unaligned),
241
+ alignment = EIGEN_PLAIN_ENUM_MAX(alignment0, Evaluator::Alignment)
242
+ };
243
+ const Index alignedStart = internal::first_default_aligned(xpr);
244
+ const Index alignedSize2 = ((size-alignedStart)/(2*packetSize))*(2*packetSize);
245
+ const Index alignedSize = ((size-alignedStart)/(packetSize))*(packetSize);
246
+ const Index alignedEnd2 = alignedStart + alignedSize2;
247
+ const Index alignedEnd = alignedStart + alignedSize;
248
+ Scalar res;
249
+ if(alignedSize)
250
+ {
251
+ PacketScalar packet_res0 = eval.template packet<alignment,PacketScalar>(alignedStart);
252
+ if(alignedSize>packetSize) // we have at least two packets to partly unroll the loop
253
+ {
254
+ PacketScalar packet_res1 = eval.template packet<alignment,PacketScalar>(alignedStart+packetSize);
255
+ for(Index index = alignedStart + 2*packetSize; index < alignedEnd2; index += 2*packetSize)
256
+ {
257
+ packet_res0 = func.packetOp(packet_res0, eval.template packet<alignment,PacketScalar>(index));
258
+ packet_res1 = func.packetOp(packet_res1, eval.template packet<alignment,PacketScalar>(index+packetSize));
259
+ }
260
+
261
+ packet_res0 = func.packetOp(packet_res0,packet_res1);
262
+ if(alignedEnd>alignedEnd2)
263
+ packet_res0 = func.packetOp(packet_res0, eval.template packet<alignment,PacketScalar>(alignedEnd2));
264
+ }
265
+ res = func.predux(packet_res0);
266
+
267
+ for(Index index = 0; index < alignedStart; ++index)
268
+ res = func(res,eval.coeff(index));
269
+
270
+ for(Index index = alignedEnd; index < size; ++index)
271
+ res = func(res,eval.coeff(index));
272
+ }
273
+ else // too small to vectorize anything.
274
+ // since this is dynamic-size hence inefficient anyway for such small sizes, don't try to optimize.
275
+ {
276
+ res = eval.coeff(0);
277
+ for(Index index = 1; index < size; ++index)
278
+ res = func(res,eval.coeff(index));
279
+ }
280
+
281
+ return res;
282
+ }
283
+ };
284
+
285
+ // NOTE: for SliceVectorizedTraversal we simply bypass unrolling
286
+ template<typename Func, typename Evaluator, int Unrolling>
287
+ struct redux_impl<Func, Evaluator, SliceVectorizedTraversal, Unrolling>
288
+ {
289
+ typedef typename Evaluator::Scalar Scalar;
290
+ typedef typename redux_traits<Func, Evaluator>::PacketType PacketType;
291
+
292
+ template<typename XprType>
293
+ EIGEN_DEVICE_FUNC static Scalar run(const Evaluator &eval, const Func& func, const XprType& xpr)
294
+ {
295
+ eigen_assert(xpr.rows()>0 && xpr.cols()>0 && "you are using an empty matrix");
296
+ const Index innerSize = xpr.innerSize();
297
+ const Index outerSize = xpr.outerSize();
298
+ enum {
299
+ packetSize = redux_traits<Func, Evaluator>::PacketSize
300
+ };
301
+ const Index packetedInnerSize = ((innerSize)/packetSize)*packetSize;
302
+ Scalar res;
303
+ if(packetedInnerSize)
304
+ {
305
+ PacketType packet_res = eval.template packet<Unaligned,PacketType>(0,0);
306
+ for(Index j=0; j<outerSize; ++j)
307
+ for(Index i=(j==0?packetSize:0); i<packetedInnerSize; i+=Index(packetSize))
308
+ packet_res = func.packetOp(packet_res, eval.template packetByOuterInner<Unaligned,PacketType>(j,i));
309
+
310
+ res = func.predux(packet_res);
311
+ for(Index j=0; j<outerSize; ++j)
312
+ for(Index i=packetedInnerSize; i<innerSize; ++i)
313
+ res = func(res, eval.coeffByOuterInner(j,i));
314
+ }
315
+ else // too small to vectorize anything.
316
+ // since this is dynamic-size hence inefficient anyway for such small sizes, don't try to optimize.
317
+ {
318
+ res = redux_impl<Func, Evaluator, DefaultTraversal, NoUnrolling>::run(eval, func, xpr);
319
+ }
320
+
321
+ return res;
322
+ }
323
+ };
324
+
325
+ template<typename Func, typename Evaluator>
326
+ struct redux_impl<Func, Evaluator, LinearVectorizedTraversal, CompleteUnrolling>
327
+ {
328
+ typedef typename Evaluator::Scalar Scalar;
329
+
330
+ typedef typename redux_traits<Func, Evaluator>::PacketType PacketType;
331
+ enum {
332
+ PacketSize = redux_traits<Func, Evaluator>::PacketSize,
333
+ Size = Evaluator::SizeAtCompileTime,
334
+ VectorizedSize = (int(Size) / int(PacketSize)) * int(PacketSize)
335
+ };
336
+
337
+ template<typename XprType>
338
+ EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE
339
+ Scalar run(const Evaluator &eval, const Func& func, const XprType &xpr)
340
+ {
341
+ EIGEN_ONLY_USED_FOR_DEBUG(xpr)
342
+ eigen_assert(xpr.rows()>0 && xpr.cols()>0 && "you are using an empty matrix");
343
+ if (VectorizedSize > 0) {
344
+ Scalar res = func.predux(redux_vec_unroller<Func, Evaluator, 0, Size / PacketSize>::template run<PacketType>(eval,func));
345
+ if (VectorizedSize != Size)
346
+ res = func(res,redux_novec_unroller<Func, Evaluator, VectorizedSize, Size-VectorizedSize>::run(eval,func));
347
+ return res;
348
+ }
349
+ else {
350
+ return redux_novec_unroller<Func, Evaluator, 0, Size>::run(eval,func);
351
+ }
352
+ }
353
+ };
354
+
355
+ // evaluator adaptor
356
+ template<typename _XprType>
357
+ class redux_evaluator : public internal::evaluator<_XprType>
358
+ {
359
+ typedef internal::evaluator<_XprType> Base;
360
+ public:
361
+ typedef _XprType XprType;
362
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
363
+ explicit redux_evaluator(const XprType &xpr) : Base(xpr) {}
364
+
365
+ typedef typename XprType::Scalar Scalar;
366
+ typedef typename XprType::CoeffReturnType CoeffReturnType;
367
+ typedef typename XprType::PacketScalar PacketScalar;
368
+
369
+ enum {
370
+ MaxRowsAtCompileTime = XprType::MaxRowsAtCompileTime,
371
+ MaxColsAtCompileTime = XprType::MaxColsAtCompileTime,
372
+ // TODO we should not remove DirectAccessBit and rather find an elegant way to query the alignment offset at runtime from the evaluator
373
+ Flags = Base::Flags & ~DirectAccessBit,
374
+ IsRowMajor = XprType::IsRowMajor,
375
+ SizeAtCompileTime = XprType::SizeAtCompileTime,
376
+ InnerSizeAtCompileTime = XprType::InnerSizeAtCompileTime
377
+ };
378
+
379
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
380
+ CoeffReturnType coeffByOuterInner(Index outer, Index inner) const
381
+ { return Base::coeff(IsRowMajor ? outer : inner, IsRowMajor ? inner : outer); }
382
+
383
+ template<int LoadMode, typename PacketType>
384
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
385
+ PacketType packetByOuterInner(Index outer, Index inner) const
386
+ { return Base::template packet<LoadMode,PacketType>(IsRowMajor ? outer : inner, IsRowMajor ? inner : outer); }
387
+
388
+ };
389
+
390
+ } // end namespace internal
391
+
392
+ /***************************************************************************
393
+ * Part 4 : public API
394
+ ***************************************************************************/
395
+
396
+
397
+ /** \returns the result of a full redux operation on the whole matrix or vector using \a func
398
+ *
399
+ * The template parameter \a BinaryOp is the type of the functor \a func which must be
400
+ * an associative operator. Both current C++98 and C++11 functor styles are handled.
401
+ *
402
+ * \warning the matrix must be not empty, otherwise an assertion is triggered.
403
+ *
404
+ * \sa DenseBase::sum(), DenseBase::minCoeff(), DenseBase::maxCoeff(), MatrixBase::colwise(), MatrixBase::rowwise()
405
+ */
406
+ template<typename Derived>
407
+ template<typename Func>
408
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
409
+ DenseBase<Derived>::redux(const Func& func) const
410
+ {
411
+ eigen_assert(this->rows()>0 && this->cols()>0 && "you are using an empty matrix");
412
+
413
+ typedef typename internal::redux_evaluator<Derived> ThisEvaluator;
414
+ ThisEvaluator thisEval(derived());
415
+
416
+ // The initial expression is passed to the reducer as an additional argument instead of
417
+ // passing it as a member of redux_evaluator to help
418
+ return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
419
+ }
420
+
421
+ /** \returns the minimum of all coefficients of \c *this.
422
+ * In case \c *this contains NaN, NaNPropagation determines the behavior:
423
+ * NaNPropagation == PropagateFast : undefined
424
+ * NaNPropagation == PropagateNaN : result is NaN
425
+ * NaNPropagation == PropagateNumbers : result is minimum of elements that are not NaN
426
+ * \warning the matrix must be not empty, otherwise an assertion is triggered.
427
+ */
428
+ template<typename Derived>
429
+ template<int NaNPropagation>
430
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
431
+ DenseBase<Derived>::minCoeff() const
432
+ {
433
+ return derived().redux(Eigen::internal::scalar_min_op<Scalar,Scalar, NaNPropagation>());
434
+ }
435
+
436
+ /** \returns the maximum of all coefficients of \c *this.
437
+ * In case \c *this contains NaN, NaNPropagation determines the behavior:
438
+ * NaNPropagation == PropagateFast : undefined
439
+ * NaNPropagation == PropagateNaN : result is NaN
440
+ * NaNPropagation == PropagateNumbers : result is maximum of elements that are not NaN
441
+ * \warning the matrix must be not empty, otherwise an assertion is triggered.
442
+ */
443
+ template<typename Derived>
444
+ template<int NaNPropagation>
445
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
446
+ DenseBase<Derived>::maxCoeff() const
447
+ {
448
+ return derived().redux(Eigen::internal::scalar_max_op<Scalar,Scalar, NaNPropagation>());
449
+ }
450
+
451
+ /** \returns the sum of all coefficients of \c *this
452
+ *
453
+ * If \c *this is empty, then the value 0 is returned.
454
+ *
455
+ * \sa trace(), prod(), mean()
456
+ */
457
+ template<typename Derived>
458
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
459
+ DenseBase<Derived>::sum() const
460
+ {
461
+ if(SizeAtCompileTime==0 || (SizeAtCompileTime==Dynamic && size()==0))
462
+ return Scalar(0);
463
+ return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>());
464
+ }
465
+
466
+ /** \returns the mean of all coefficients of *this
467
+ *
468
+ * \sa trace(), prod(), sum()
469
+ */
470
+ template<typename Derived>
471
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
472
+ DenseBase<Derived>::mean() const
473
+ {
474
+ #ifdef __INTEL_COMPILER
475
+ #pragma warning push
476
+ #pragma warning ( disable : 2259 )
477
+ #endif
478
+ return Scalar(derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>())) / Scalar(this->size());
479
+ #ifdef __INTEL_COMPILER
480
+ #pragma warning pop
481
+ #endif
482
+ }
483
+
484
+ /** \returns the product of all coefficients of *this
485
+ *
486
+ * Example: \include MatrixBase_prod.cpp
487
+ * Output: \verbinclude MatrixBase_prod.out
488
+ *
489
+ * \sa sum(), mean(), trace()
490
+ */
491
+ template<typename Derived>
492
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
493
+ DenseBase<Derived>::prod() const
494
+ {
495
+ if(SizeAtCompileTime==0 || (SizeAtCompileTime==Dynamic && size()==0))
496
+ return Scalar(1);
497
+ return derived().redux(Eigen::internal::scalar_product_op<Scalar>());
498
+ }
499
+
500
+ /** \returns the trace of \c *this, i.e. the sum of the coefficients on the main diagonal.
501
+ *
502
+ * \c *this can be any matrix, not necessarily square.
503
+ *
504
+ * \sa diagonal(), sum()
505
+ */
506
+ template<typename Derived>
507
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename internal::traits<Derived>::Scalar
508
+ MatrixBase<Derived>::trace() const
509
+ {
510
+ return derived().diagonal().sum();
511
+ }
512
+
513
+ } // end namespace Eigen
514
+
515
+ #endif // EIGEN_REDUX_H