umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,109 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_NOALIAS_H
11
+ #define EIGEN_NOALIAS_H
12
+
13
+ namespace Eigen {
14
+
15
+ /** \class NoAlias
16
+ * \ingroup Core_Module
17
+ *
18
+ * \brief Pseudo expression providing an operator = assuming no aliasing
19
+ *
20
+ * \tparam ExpressionType the type of the object on which to do the lazy assignment
21
+ *
22
+ * This class represents an expression with special assignment operators
23
+ * assuming no aliasing between the target expression and the source expression.
24
+ * More precisely it alloas to bypass the EvalBeforeAssignBit flag of the source expression.
25
+ * It is the return type of MatrixBase::noalias()
26
+ * and most of the time this is the only way it is used.
27
+ *
28
+ * \sa MatrixBase::noalias()
29
+ */
30
+ template<typename ExpressionType, template <typename> class StorageBase>
31
+ class NoAlias
32
+ {
33
+ public:
34
+ typedef typename ExpressionType::Scalar Scalar;
35
+
36
+ EIGEN_DEVICE_FUNC
37
+ explicit NoAlias(ExpressionType& expression) : m_expression(expression) {}
38
+
39
+ template<typename OtherDerived>
40
+ EIGEN_DEVICE_FUNC
41
+ EIGEN_STRONG_INLINE ExpressionType& operator=(const StorageBase<OtherDerived>& other)
42
+ {
43
+ call_assignment_no_alias(m_expression, other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
44
+ return m_expression;
45
+ }
46
+
47
+ template<typename OtherDerived>
48
+ EIGEN_DEVICE_FUNC
49
+ EIGEN_STRONG_INLINE ExpressionType& operator+=(const StorageBase<OtherDerived>& other)
50
+ {
51
+ call_assignment_no_alias(m_expression, other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>());
52
+ return m_expression;
53
+ }
54
+
55
+ template<typename OtherDerived>
56
+ EIGEN_DEVICE_FUNC
57
+ EIGEN_STRONG_INLINE ExpressionType& operator-=(const StorageBase<OtherDerived>& other)
58
+ {
59
+ call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
60
+ return m_expression;
61
+ }
62
+
63
+ EIGEN_DEVICE_FUNC
64
+ ExpressionType& expression() const
65
+ {
66
+ return m_expression;
67
+ }
68
+
69
+ protected:
70
+ ExpressionType& m_expression;
71
+ };
72
+
73
+ /** \returns a pseudo expression of \c *this with an operator= assuming
74
+ * no aliasing between \c *this and the source expression.
75
+ *
76
+ * More precisely, noalias() allows to bypass the EvalBeforeAssignBit flag.
77
+ * Currently, even though several expressions may alias, only product
78
+ * expressions have this flag. Therefore, noalias() is only useful when
79
+ * the source expression contains a matrix product.
80
+ *
81
+ * Here are some examples where noalias is useful:
82
+ * \code
83
+ * D.noalias() = A * B;
84
+ * D.noalias() += A.transpose() * B;
85
+ * D.noalias() -= 2 * A * B.adjoint();
86
+ * \endcode
87
+ *
88
+ * On the other hand the following example will lead to a \b wrong result:
89
+ * \code
90
+ * A.noalias() = A * B;
91
+ * \endcode
92
+ * because the result matrix A is also an operand of the matrix product. Therefore,
93
+ * there is no alternative than evaluating A * B in a temporary, that is the default
94
+ * behavior when you write:
95
+ * \code
96
+ * A = A * B;
97
+ * \endcode
98
+ *
99
+ * \sa class NoAlias
100
+ */
101
+ template<typename Derived>
102
+ NoAlias<Derived,MatrixBase> EIGEN_DEVICE_FUNC MatrixBase<Derived>::noalias()
103
+ {
104
+ return NoAlias<Derived, Eigen::MatrixBase >(derived());
105
+ }
106
+
107
+ } // end namespace Eigen
108
+
109
+ #endif // EIGEN_NOALIAS_H
@@ -0,0 +1,335 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2006-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_NUMTRAITS_H
11
+ #define EIGEN_NUMTRAITS_H
12
+
13
+ namespace Eigen {
14
+
15
+ namespace internal {
16
+
17
+ // default implementation of digits10(), based on numeric_limits if specialized,
18
+ // 0 for integer types, and log10(epsilon()) otherwise.
19
+ template< typename T,
20
+ bool use_numeric_limits = std::numeric_limits<T>::is_specialized,
21
+ bool is_integer = NumTraits<T>::IsInteger>
22
+ struct default_digits10_impl
23
+ {
24
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
25
+ static int run() { return std::numeric_limits<T>::digits10; }
26
+ };
27
+
28
+ template<typename T>
29
+ struct default_digits10_impl<T,false,false> // Floating point
30
+ {
31
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
32
+ static int run() {
33
+ using std::log10;
34
+ using std::ceil;
35
+ typedef typename NumTraits<T>::Real Real;
36
+ return int(ceil(-log10(NumTraits<Real>::epsilon())));
37
+ }
38
+ };
39
+
40
+ template<typename T>
41
+ struct default_digits10_impl<T,false,true> // Integer
42
+ {
43
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
44
+ static int run() { return 0; }
45
+ };
46
+
47
+
48
+ // default implementation of digits(), based on numeric_limits if specialized,
49
+ // 0 for integer types, and log2(epsilon()) otherwise.
50
+ template< typename T,
51
+ bool use_numeric_limits = std::numeric_limits<T>::is_specialized,
52
+ bool is_integer = NumTraits<T>::IsInteger>
53
+ struct default_digits_impl
54
+ {
55
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
56
+ static int run() { return std::numeric_limits<T>::digits; }
57
+ };
58
+
59
+ template<typename T>
60
+ struct default_digits_impl<T,false,false> // Floating point
61
+ {
62
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
63
+ static int run() {
64
+ using std::log;
65
+ using std::ceil;
66
+ typedef typename NumTraits<T>::Real Real;
67
+ return int(ceil(-log(NumTraits<Real>::epsilon())/log(static_cast<Real>(2))));
68
+ }
69
+ };
70
+
71
+ template<typename T>
72
+ struct default_digits_impl<T,false,true> // Integer
73
+ {
74
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
75
+ static int run() { return 0; }
76
+ };
77
+
78
+ } // end namespace internal
79
+
80
+ namespace numext {
81
+ /** \internal bit-wise cast without changing the underlying bit representation. */
82
+
83
+ // TODO: Replace by std::bit_cast (available in C++20)
84
+ template <typename Tgt, typename Src>
85
+ EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC Tgt bit_cast(const Src& src) {
86
+ #if EIGEN_HAS_TYPE_TRAITS
87
+ // The behaviour of memcpy is not specified for non-trivially copyable types
88
+ EIGEN_STATIC_ASSERT(std::is_trivially_copyable<Src>::value, THIS_TYPE_IS_NOT_SUPPORTED);
89
+ EIGEN_STATIC_ASSERT(std::is_trivially_copyable<Tgt>::value && std::is_default_constructible<Tgt>::value,
90
+ THIS_TYPE_IS_NOT_SUPPORTED);
91
+ #endif
92
+
93
+ EIGEN_STATIC_ASSERT(sizeof(Src) == sizeof(Tgt), THIS_TYPE_IS_NOT_SUPPORTED);
94
+ Tgt tgt;
95
+ EIGEN_USING_STD(memcpy)
96
+ memcpy(&tgt, &src, sizeof(Tgt));
97
+ return tgt;
98
+ }
99
+ } // namespace numext
100
+
101
+ /** \class NumTraits
102
+ * \ingroup Core_Module
103
+ *
104
+ * \brief Holds information about the various numeric (i.e. scalar) types allowed by Eigen.
105
+ *
106
+ * \tparam T the numeric type at hand
107
+ *
108
+ * This class stores enums, typedefs and static methods giving information about a numeric type.
109
+ *
110
+ * The provided data consists of:
111
+ * \li A typedef \c Real, giving the "real part" type of \a T. If \a T is already real,
112
+ * then \c Real is just a typedef to \a T. If \a T is \c std::complex<U> then \c Real
113
+ * is a typedef to \a U.
114
+ * \li A typedef \c NonInteger, giving the type that should be used for operations producing non-integral values,
115
+ * such as quotients, square roots, etc. If \a T is a floating-point type, then this typedef just gives
116
+ * \a T again. Note however that many Eigen functions such as internal::sqrt simply refuse to
117
+ * take integers. Outside of a few cases, Eigen doesn't do automatic type promotion. Thus, this typedef is
118
+ * only intended as a helper for code that needs to explicitly promote types.
119
+ * \li A typedef \c Literal giving the type to use for numeric literals such as "2" or "0.5". For instance, for \c std::complex<U>, Literal is defined as \c U.
120
+ * Of course, this type must be fully compatible with \a T. In doubt, just use \a T here.
121
+ * \li A typedef \a Nested giving the type to use to nest a value inside of the expression tree. If you don't know what
122
+ * this means, just use \a T here.
123
+ * \li An enum value \a IsComplex. It is equal to 1 if \a T is a \c std::complex
124
+ * type, and to 0 otherwise.
125
+ * \li An enum value \a IsInteger. It is equal to \c 1 if \a T is an integer type such as \c int,
126
+ * and to \c 0 otherwise.
127
+ * \li Enum values ReadCost, AddCost and MulCost representing a rough estimate of the number of CPU cycles needed
128
+ * to by move / add / mul instructions respectively, assuming the data is already stored in CPU registers.
129
+ * Stay vague here. No need to do architecture-specific stuff. If you don't know what this means, just use \c Eigen::HugeCost.
130
+ * \li An enum value \a IsSigned. It is equal to \c 1 if \a T is a signed type and to 0 if \a T is unsigned.
131
+ * \li An enum value \a RequireInitialization. It is equal to \c 1 if the constructor of the numeric type \a T must
132
+ * be called, and to 0 if it is safe not to call it. Default is 0 if \a T is an arithmetic type, and 1 otherwise.
133
+ * \li An epsilon() function which, unlike <a href="http://en.cppreference.com/w/cpp/types/numeric_limits/epsilon">std::numeric_limits::epsilon()</a>,
134
+ * it returns a \a Real instead of a \a T.
135
+ * \li A dummy_precision() function returning a weak epsilon value. It is mainly used as a default
136
+ * value by the fuzzy comparison operators.
137
+ * \li highest() and lowest() functions returning the highest and lowest possible values respectively.
138
+ * \li digits() function returning the number of radix digits (non-sign digits for integers, mantissa for floating-point). This is
139
+ * the analogue of <a href="http://en.cppreference.com/w/cpp/types/numeric_limits/digits">std::numeric_limits<T>::digits</a>
140
+ * which is used as the default implementation if specialized.
141
+ * \li digits10() function returning the number of decimal digits that can be represented without change. This is
142
+ * the analogue of <a href="http://en.cppreference.com/w/cpp/types/numeric_limits/digits10">std::numeric_limits<T>::digits10</a>
143
+ * which is used as the default implementation if specialized.
144
+ * \li min_exponent() and max_exponent() functions returning the highest and lowest possible values, respectively,
145
+ * such that the radix raised to the power exponent-1 is a normalized floating-point number. These are equivalent to
146
+ * <a href="http://en.cppreference.com/w/cpp/types/numeric_limits/min_exponent">std::numeric_limits<T>::min_exponent</a>/
147
+ * <a href="http://en.cppreference.com/w/cpp/types/numeric_limits/max_exponent">std::numeric_limits<T>::max_exponent</a>.
148
+ * \li infinity() function returning a representation of positive infinity, if available.
149
+ * \li quiet_NaN function returning a non-signaling "not-a-number", if available.
150
+ */
151
+
152
+ template<typename T> struct GenericNumTraits
153
+ {
154
+ enum {
155
+ IsInteger = std::numeric_limits<T>::is_integer,
156
+ IsSigned = std::numeric_limits<T>::is_signed,
157
+ IsComplex = 0,
158
+ RequireInitialization = internal::is_arithmetic<T>::value ? 0 : 1,
159
+ ReadCost = 1,
160
+ AddCost = 1,
161
+ MulCost = 1
162
+ };
163
+
164
+ typedef T Real;
165
+ typedef typename internal::conditional<
166
+ IsInteger,
167
+ typename internal::conditional<sizeof(T)<=2, float, double>::type,
168
+ T
169
+ >::type NonInteger;
170
+ typedef T Nested;
171
+ typedef T Literal;
172
+
173
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
174
+ static inline Real epsilon()
175
+ {
176
+ return numext::numeric_limits<T>::epsilon();
177
+ }
178
+
179
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
180
+ static inline int digits10()
181
+ {
182
+ return internal::default_digits10_impl<T>::run();
183
+ }
184
+
185
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
186
+ static inline int digits()
187
+ {
188
+ return internal::default_digits_impl<T>::run();
189
+ }
190
+
191
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
192
+ static inline int min_exponent()
193
+ {
194
+ return numext::numeric_limits<T>::min_exponent;
195
+ }
196
+
197
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
198
+ static inline int max_exponent()
199
+ {
200
+ return numext::numeric_limits<T>::max_exponent;
201
+ }
202
+
203
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
204
+ static inline Real dummy_precision()
205
+ {
206
+ // make sure to override this for floating-point types
207
+ return Real(0);
208
+ }
209
+
210
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
211
+ static inline T highest() {
212
+ return (numext::numeric_limits<T>::max)();
213
+ }
214
+
215
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
216
+ static inline T lowest() {
217
+ return IsInteger ? (numext::numeric_limits<T>::min)()
218
+ : static_cast<T>(-(numext::numeric_limits<T>::max)());
219
+ }
220
+
221
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
222
+ static inline T infinity() {
223
+ return numext::numeric_limits<T>::infinity();
224
+ }
225
+
226
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
227
+ static inline T quiet_NaN() {
228
+ return numext::numeric_limits<T>::quiet_NaN();
229
+ }
230
+ };
231
+
232
+ template<typename T> struct NumTraits : GenericNumTraits<T>
233
+ {};
234
+
235
+ template<> struct NumTraits<float>
236
+ : GenericNumTraits<float>
237
+ {
238
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
239
+ static inline float dummy_precision() { return 1e-5f; }
240
+ };
241
+
242
+ template<> struct NumTraits<double> : GenericNumTraits<double>
243
+ {
244
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
245
+ static inline double dummy_precision() { return 1e-12; }
246
+ };
247
+
248
+ template<> struct NumTraits<long double>
249
+ : GenericNumTraits<long double>
250
+ {
251
+ EIGEN_CONSTEXPR
252
+ static inline long double dummy_precision() { return 1e-15l; }
253
+ };
254
+
255
+ template<typename _Real> struct NumTraits<std::complex<_Real> >
256
+ : GenericNumTraits<std::complex<_Real> >
257
+ {
258
+ typedef _Real Real;
259
+ typedef typename NumTraits<_Real>::Literal Literal;
260
+ enum {
261
+ IsComplex = 1,
262
+ RequireInitialization = NumTraits<_Real>::RequireInitialization,
263
+ ReadCost = 2 * NumTraits<_Real>::ReadCost,
264
+ AddCost = 2 * NumTraits<Real>::AddCost,
265
+ MulCost = 4 * NumTraits<Real>::MulCost + 2 * NumTraits<Real>::AddCost
266
+ };
267
+
268
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
269
+ static inline Real epsilon() { return NumTraits<Real>::epsilon(); }
270
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
271
+ static inline Real dummy_precision() { return NumTraits<Real>::dummy_precision(); }
272
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
273
+ static inline int digits10() { return NumTraits<Real>::digits10(); }
274
+ };
275
+
276
+ template<typename Scalar, int Rows, int Cols, int Options, int MaxRows, int MaxCols>
277
+ struct NumTraits<Array<Scalar, Rows, Cols, Options, MaxRows, MaxCols> >
278
+ {
279
+ typedef Array<Scalar, Rows, Cols, Options, MaxRows, MaxCols> ArrayType;
280
+ typedef typename NumTraits<Scalar>::Real RealScalar;
281
+ typedef Array<RealScalar, Rows, Cols, Options, MaxRows, MaxCols> Real;
282
+ typedef typename NumTraits<Scalar>::NonInteger NonIntegerScalar;
283
+ typedef Array<NonIntegerScalar, Rows, Cols, Options, MaxRows, MaxCols> NonInteger;
284
+ typedef ArrayType & Nested;
285
+ typedef typename NumTraits<Scalar>::Literal Literal;
286
+
287
+ enum {
288
+ IsComplex = NumTraits<Scalar>::IsComplex,
289
+ IsInteger = NumTraits<Scalar>::IsInteger,
290
+ IsSigned = NumTraits<Scalar>::IsSigned,
291
+ RequireInitialization = 1,
292
+ ReadCost = ArrayType::SizeAtCompileTime==Dynamic ? HugeCost : ArrayType::SizeAtCompileTime * int(NumTraits<Scalar>::ReadCost),
293
+ AddCost = ArrayType::SizeAtCompileTime==Dynamic ? HugeCost : ArrayType::SizeAtCompileTime * int(NumTraits<Scalar>::AddCost),
294
+ MulCost = ArrayType::SizeAtCompileTime==Dynamic ? HugeCost : ArrayType::SizeAtCompileTime * int(NumTraits<Scalar>::MulCost)
295
+ };
296
+
297
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
298
+ static inline RealScalar epsilon() { return NumTraits<RealScalar>::epsilon(); }
299
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
300
+ static inline RealScalar dummy_precision() { return NumTraits<RealScalar>::dummy_precision(); }
301
+
302
+ EIGEN_CONSTEXPR
303
+ static inline int digits10() { return NumTraits<Scalar>::digits10(); }
304
+ };
305
+
306
+ template<> struct NumTraits<std::string>
307
+ : GenericNumTraits<std::string>
308
+ {
309
+ enum {
310
+ RequireInitialization = 1,
311
+ ReadCost = HugeCost,
312
+ AddCost = HugeCost,
313
+ MulCost = HugeCost
314
+ };
315
+
316
+ EIGEN_CONSTEXPR
317
+ static inline int digits10() { return 0; }
318
+
319
+ private:
320
+ static inline std::string epsilon();
321
+ static inline std::string dummy_precision();
322
+ static inline std::string lowest();
323
+ static inline std::string highest();
324
+ static inline std::string infinity();
325
+ static inline std::string quiet_NaN();
326
+ };
327
+
328
+ // Empty specialization for void to allow template specialization based on NumTraits<T>::Real with T==void and SFINAE.
329
+ template<> struct NumTraits<void> {};
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+
331
+ template<> struct NumTraits<bool> : GenericNumTraits<bool> {};
332
+
333
+ } // end namespace Eigen
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+
335
+ #endif // EIGEN_NUMTRAITS_H
@@ -0,0 +1,232 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
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+ // for linear algebra.
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+ //
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+ // Copyright (C) 2011-2018 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
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+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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+
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+ #ifndef EIGEN_PARTIALREDUX_H
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+ #define EIGEN_PARTIALREDUX_H
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+
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+ namespace Eigen {
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+
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+ namespace internal {
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+
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+
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+ /***************************************************************************
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+ *
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+ * This file provides evaluators for partial reductions.
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+ * There are two modes:
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+ *
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+ * - scalar path: simply calls the respective function on the column or row.
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+ * -> nothing special here, all the tricky part is handled by the return
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+ * types of VectorwiseOp's members. They embed the functor calling the
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+ * respective DenseBase's member function.
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+ *
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+ * - vectorized path: implements a packet-wise reductions followed by
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+ * some (optional) processing of the outcome, e.g., division by n for mean.
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+ *
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+ * For the vectorized path let's observe that the packet-size and outer-unrolling
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+ * are both decided by the assignement logic. So all we have to do is to decide
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+ * on the inner unrolling.
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+ *
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+ * For the unrolling, we can reuse "internal::redux_vec_unroller" from Redux.h,
36
+ * but be need to be careful to specify correct increment.
37
+ *
38
+ ***************************************************************************/
39
+
40
+
41
+ /* logic deciding a strategy for unrolling of vectorized paths */
42
+ template<typename Func, typename Evaluator>
43
+ struct packetwise_redux_traits
44
+ {
45
+ enum {
46
+ OuterSize = int(Evaluator::IsRowMajor) ? Evaluator::RowsAtCompileTime : Evaluator::ColsAtCompileTime,
47
+ Cost = OuterSize == Dynamic ? HugeCost
48
+ : OuterSize * Evaluator::CoeffReadCost + (OuterSize-1) * functor_traits<Func>::Cost,
49
+ Unrolling = Cost <= EIGEN_UNROLLING_LIMIT ? CompleteUnrolling : NoUnrolling
50
+ };
51
+
52
+ };
53
+
54
+ /* Value to be returned when size==0 , by default let's return 0 */
55
+ template<typename PacketType,typename Func>
56
+ EIGEN_DEVICE_FUNC
57
+ PacketType packetwise_redux_empty_value(const Func& ) { return pset1<PacketType>(0); }
58
+
59
+ /* For products the default is 1 */
60
+ template<typename PacketType,typename Scalar>
61
+ EIGEN_DEVICE_FUNC
62
+ PacketType packetwise_redux_empty_value(const scalar_product_op<Scalar,Scalar>& ) { return pset1<PacketType>(1); }
63
+
64
+ /* Perform the actual reduction */
65
+ template<typename Func, typename Evaluator,
66
+ int Unrolling = packetwise_redux_traits<Func, Evaluator>::Unrolling
67
+ >
68
+ struct packetwise_redux_impl;
69
+
70
+ /* Perform the actual reduction with unrolling */
71
+ template<typename Func, typename Evaluator>
72
+ struct packetwise_redux_impl<Func, Evaluator, CompleteUnrolling>
73
+ {
74
+ typedef redux_novec_unroller<Func,Evaluator, 0, Evaluator::SizeAtCompileTime> Base;
75
+ typedef typename Evaluator::Scalar Scalar;
76
+
77
+ template<typename PacketType>
78
+ EIGEN_DEVICE_FUNC static EIGEN_STRONG_INLINE
79
+ PacketType run(const Evaluator &eval, const Func& func, Index /*size*/)
80
+ {
81
+ return redux_vec_unroller<Func, Evaluator, 0, packetwise_redux_traits<Func, Evaluator>::OuterSize>::template run<PacketType>(eval,func);
82
+ }
83
+ };
84
+
85
+ /* Add a specialization of redux_vec_unroller for size==0 at compiletime.
86
+ * This specialization is not required for general reductions, which is
87
+ * why it is defined here.
88
+ */
89
+ template<typename Func, typename Evaluator, int Start>
90
+ struct redux_vec_unroller<Func, Evaluator, Start, 0>
91
+ {
92
+ template<typename PacketType>
93
+ EIGEN_DEVICE_FUNC
94
+ static EIGEN_STRONG_INLINE PacketType run(const Evaluator &, const Func& f)
95
+ {
96
+ return packetwise_redux_empty_value<PacketType>(f);
97
+ }
98
+ };
99
+
100
+ /* Perform the actual reduction for dynamic sizes */
101
+ template<typename Func, typename Evaluator>
102
+ struct packetwise_redux_impl<Func, Evaluator, NoUnrolling>
103
+ {
104
+ typedef typename Evaluator::Scalar Scalar;
105
+ typedef typename redux_traits<Func, Evaluator>::PacketType PacketScalar;
106
+
107
+ template<typename PacketType>
108
+ EIGEN_DEVICE_FUNC
109
+ static PacketType run(const Evaluator &eval, const Func& func, Index size)
110
+ {
111
+ if(size==0)
112
+ return packetwise_redux_empty_value<PacketType>(func);
113
+
114
+ const Index size4 = (size-1)&(~3);
115
+ PacketType p = eval.template packetByOuterInner<Unaligned,PacketType>(0,0);
116
+ Index i = 1;
117
+ // This loop is optimized for instruction pipelining:
118
+ // - each iteration generates two independent instructions
119
+ // - thanks to branch prediction and out-of-order execution we have independent instructions across loops
120
+ for(; i<size4; i+=4)
121
+ p = func.packetOp(p,
122
+ func.packetOp(
123
+ func.packetOp(eval.template packetByOuterInner<Unaligned,PacketType>(i+0,0),eval.template packetByOuterInner<Unaligned,PacketType>(i+1,0)),
124
+ func.packetOp(eval.template packetByOuterInner<Unaligned,PacketType>(i+2,0),eval.template packetByOuterInner<Unaligned,PacketType>(i+3,0))));
125
+ for(; i<size; ++i)
126
+ p = func.packetOp(p, eval.template packetByOuterInner<Unaligned,PacketType>(i,0));
127
+ return p;
128
+ }
129
+ };
130
+
131
+ template< typename ArgType, typename MemberOp, int Direction>
132
+ struct evaluator<PartialReduxExpr<ArgType, MemberOp, Direction> >
133
+ : evaluator_base<PartialReduxExpr<ArgType, MemberOp, Direction> >
134
+ {
135
+ typedef PartialReduxExpr<ArgType, MemberOp, Direction> XprType;
136
+ typedef typename internal::nested_eval<ArgType,1>::type ArgTypeNested;
137
+ typedef typename internal::add_const_on_value_type<ArgTypeNested>::type ConstArgTypeNested;
138
+ typedef typename internal::remove_all<ArgTypeNested>::type ArgTypeNestedCleaned;
139
+ typedef typename ArgType::Scalar InputScalar;
140
+ typedef typename XprType::Scalar Scalar;
141
+ enum {
142
+ TraversalSize = Direction==int(Vertical) ? int(ArgType::RowsAtCompileTime) : int(ArgType::ColsAtCompileTime)
143
+ };
144
+ typedef typename MemberOp::template Cost<int(TraversalSize)> CostOpType;
145
+ enum {
146
+ CoeffReadCost = TraversalSize==Dynamic ? HugeCost
147
+ : TraversalSize==0 ? 1
148
+ : int(TraversalSize) * int(evaluator<ArgType>::CoeffReadCost) + int(CostOpType::value),
149
+
150
+ _ArgFlags = evaluator<ArgType>::Flags,
151
+
152
+ _Vectorizable = bool(int(_ArgFlags)&PacketAccessBit)
153
+ && bool(MemberOp::Vectorizable)
154
+ && (Direction==int(Vertical) ? bool(_ArgFlags&RowMajorBit) : (_ArgFlags&RowMajorBit)==0)
155
+ && (TraversalSize!=0),
156
+
157
+ Flags = (traits<XprType>::Flags&RowMajorBit)
158
+ | (evaluator<ArgType>::Flags&(HereditaryBits&(~RowMajorBit)))
159
+ | (_Vectorizable ? PacketAccessBit : 0)
160
+ | LinearAccessBit,
161
+
162
+ Alignment = 0 // FIXME this will need to be improved once PartialReduxExpr is vectorized
163
+ };
164
+
165
+ EIGEN_DEVICE_FUNC explicit evaluator(const XprType xpr)
166
+ : m_arg(xpr.nestedExpression()), m_functor(xpr.functor())
167
+ {
168
+ EIGEN_INTERNAL_CHECK_COST_VALUE(TraversalSize==Dynamic ? HugeCost : (TraversalSize==0 ? 1 : int(CostOpType::value)));
169
+ EIGEN_INTERNAL_CHECK_COST_VALUE(CoeffReadCost);
170
+ }
171
+
172
+ typedef typename XprType::CoeffReturnType CoeffReturnType;
173
+
174
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
175
+ const Scalar coeff(Index i, Index j) const
176
+ {
177
+ return coeff(Direction==Vertical ? j : i);
178
+ }
179
+
180
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
181
+ const Scalar coeff(Index index) const
182
+ {
183
+ return m_functor(m_arg.template subVector<DirectionType(Direction)>(index));
184
+ }
185
+
186
+ template<int LoadMode,typename PacketType>
187
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
188
+ PacketType packet(Index i, Index j) const
189
+ {
190
+ return packet<LoadMode,PacketType>(Direction==Vertical ? j : i);
191
+ }
192
+
193
+ template<int LoadMode,typename PacketType>
194
+ EIGEN_STRONG_INLINE EIGEN_DEVICE_FUNC
195
+ PacketType packet(Index idx) const
196
+ {
197
+ enum { PacketSize = internal::unpacket_traits<PacketType>::size };
198
+ typedef Block<const ArgTypeNestedCleaned,
199
+ Direction==Vertical ? int(ArgType::RowsAtCompileTime) : int(PacketSize),
200
+ Direction==Vertical ? int(PacketSize) : int(ArgType::ColsAtCompileTime),
201
+ true /* InnerPanel */> PanelType;
202
+
203
+ PanelType panel(m_arg,
204
+ Direction==Vertical ? 0 : idx,
205
+ Direction==Vertical ? idx : 0,
206
+ Direction==Vertical ? m_arg.rows() : Index(PacketSize),
207
+ Direction==Vertical ? Index(PacketSize) : m_arg.cols());
208
+
209
+ // FIXME
210
+ // See bug 1612, currently if PacketSize==1 (i.e. complex<double> with 128bits registers) then the storage-order of panel get reversed
211
+ // and methods like packetByOuterInner do not make sense anymore in this context.
212
+ // So let's just by pass "vectorization" in this case:
213
+ if(PacketSize==1)
214
+ return internal::pset1<PacketType>(coeff(idx));
215
+
216
+ typedef typename internal::redux_evaluator<PanelType> PanelEvaluator;
217
+ PanelEvaluator panel_eval(panel);
218
+ typedef typename MemberOp::BinaryOp BinaryOp;
219
+ PacketType p = internal::packetwise_redux_impl<BinaryOp,PanelEvaluator>::template run<PacketType>(panel_eval,m_functor.binaryFunc(),m_arg.outerSize());
220
+ return p;
221
+ }
222
+
223
+ protected:
224
+ ConstArgTypeNested m_arg;
225
+ const MemberOp m_functor;
226
+ };
227
+
228
+ } // end namespace internal
229
+
230
+ } // end namespace Eigen
231
+
232
+ #endif // EIGEN_PARTIALREDUX_H