umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,472 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_TRIANGULAR_MATRIX_MATRIX_H
11
+ #define EIGEN_TRIANGULAR_MATRIX_MATRIX_H
12
+
13
+ namespace Eigen {
14
+
15
+ namespace internal {
16
+
17
+ // template<typename Scalar, int mr, int StorageOrder, bool Conjugate, int Mode>
18
+ // struct gemm_pack_lhs_triangular
19
+ // {
20
+ // Matrix<Scalar,mr,mr,
21
+ // void operator()(Scalar* blockA, const EIGEN_RESTRICT Scalar* _lhs, int lhsStride, int depth, int rows)
22
+ // {
23
+ // conj_if<NumTraits<Scalar>::IsComplex && Conjugate> cj;
24
+ // const_blas_data_mapper<Scalar, StorageOrder> lhs(_lhs,lhsStride);
25
+ // int count = 0;
26
+ // const int peeled_mc = (rows/mr)*mr;
27
+ // for(int i=0; i<peeled_mc; i+=mr)
28
+ // {
29
+ // for(int k=0; k<depth; k++)
30
+ // for(int w=0; w<mr; w++)
31
+ // blockA[count++] = cj(lhs(i+w, k));
32
+ // }
33
+ // for(int i=peeled_mc; i<rows; i++)
34
+ // {
35
+ // for(int k=0; k<depth; k++)
36
+ // blockA[count++] = cj(lhs(i, k));
37
+ // }
38
+ // }
39
+ // };
40
+
41
+ /* Optimized triangular matrix * matrix (_TRMM++) product built on top of
42
+ * the general matrix matrix product.
43
+ */
44
+ template <typename Scalar, typename Index,
45
+ int Mode, bool LhsIsTriangular,
46
+ int LhsStorageOrder, bool ConjugateLhs,
47
+ int RhsStorageOrder, bool ConjugateRhs,
48
+ int ResStorageOrder, int ResInnerStride,
49
+ int Version = Specialized>
50
+ struct product_triangular_matrix_matrix;
51
+
52
+ template <typename Scalar, typename Index,
53
+ int Mode, bool LhsIsTriangular,
54
+ int LhsStorageOrder, bool ConjugateLhs,
55
+ int RhsStorageOrder, bool ConjugateRhs,
56
+ int ResInnerStride, int Version>
57
+ struct product_triangular_matrix_matrix<Scalar,Index,Mode,LhsIsTriangular,
58
+ LhsStorageOrder,ConjugateLhs,
59
+ RhsStorageOrder,ConjugateRhs,RowMajor,ResInnerStride,Version>
60
+ {
61
+ static EIGEN_STRONG_INLINE void run(
62
+ Index rows, Index cols, Index depth,
63
+ const Scalar* lhs, Index lhsStride,
64
+ const Scalar* rhs, Index rhsStride,
65
+ Scalar* res, Index resIncr, Index resStride,
66
+ const Scalar& alpha, level3_blocking<Scalar,Scalar>& blocking)
67
+ {
68
+ product_triangular_matrix_matrix<Scalar, Index,
69
+ (Mode&(UnitDiag|ZeroDiag)) | ((Mode&Upper) ? Lower : Upper),
70
+ (!LhsIsTriangular),
71
+ RhsStorageOrder==RowMajor ? ColMajor : RowMajor,
72
+ ConjugateRhs,
73
+ LhsStorageOrder==RowMajor ? ColMajor : RowMajor,
74
+ ConjugateLhs,
75
+ ColMajor, ResInnerStride>
76
+ ::run(cols, rows, depth, rhs, rhsStride, lhs, lhsStride, res, resIncr, resStride, alpha, blocking);
77
+ }
78
+ };
79
+
80
+ // implements col-major += alpha * op(triangular) * op(general)
81
+ template <typename Scalar, typename Index, int Mode,
82
+ int LhsStorageOrder, bool ConjugateLhs,
83
+ int RhsStorageOrder, bool ConjugateRhs,
84
+ int ResInnerStride, int Version>
85
+ struct product_triangular_matrix_matrix<Scalar,Index,Mode,true,
86
+ LhsStorageOrder,ConjugateLhs,
87
+ RhsStorageOrder,ConjugateRhs,ColMajor,ResInnerStride,Version>
88
+ {
89
+
90
+ typedef gebp_traits<Scalar,Scalar> Traits;
91
+ enum {
92
+ SmallPanelWidth = 2 * EIGEN_PLAIN_ENUM_MAX(Traits::mr,Traits::nr),
93
+ IsLower = (Mode&Lower) == Lower,
94
+ SetDiag = (Mode&(ZeroDiag|UnitDiag)) ? 0 : 1
95
+ };
96
+
97
+ static EIGEN_DONT_INLINE void run(
98
+ Index _rows, Index _cols, Index _depth,
99
+ const Scalar* _lhs, Index lhsStride,
100
+ const Scalar* _rhs, Index rhsStride,
101
+ Scalar* res, Index resIncr, Index resStride,
102
+ const Scalar& alpha, level3_blocking<Scalar,Scalar>& blocking);
103
+ };
104
+
105
+ template <typename Scalar, typename Index, int Mode,
106
+ int LhsStorageOrder, bool ConjugateLhs,
107
+ int RhsStorageOrder, bool ConjugateRhs,
108
+ int ResInnerStride, int Version>
109
+ EIGEN_DONT_INLINE void product_triangular_matrix_matrix<Scalar,Index,Mode,true,
110
+ LhsStorageOrder,ConjugateLhs,
111
+ RhsStorageOrder,ConjugateRhs,ColMajor,ResInnerStride,Version>::run(
112
+ Index _rows, Index _cols, Index _depth,
113
+ const Scalar* _lhs, Index lhsStride,
114
+ const Scalar* _rhs, Index rhsStride,
115
+ Scalar* _res, Index resIncr, Index resStride,
116
+ const Scalar& alpha, level3_blocking<Scalar,Scalar>& blocking)
117
+ {
118
+ // strip zeros
119
+ Index diagSize = (std::min)(_rows,_depth);
120
+ Index rows = IsLower ? _rows : diagSize;
121
+ Index depth = IsLower ? diagSize : _depth;
122
+ Index cols = _cols;
123
+
124
+ typedef const_blas_data_mapper<Scalar, Index, LhsStorageOrder> LhsMapper;
125
+ typedef const_blas_data_mapper<Scalar, Index, RhsStorageOrder> RhsMapper;
126
+ typedef blas_data_mapper<typename Traits::ResScalar, Index, ColMajor, Unaligned, ResInnerStride> ResMapper;
127
+ LhsMapper lhs(_lhs,lhsStride);
128
+ RhsMapper rhs(_rhs,rhsStride);
129
+ ResMapper res(_res, resStride, resIncr);
130
+
131
+ Index kc = blocking.kc(); // cache block size along the K direction
132
+ Index mc = (std::min)(rows,blocking.mc()); // cache block size along the M direction
133
+ // The small panel size must not be larger than blocking size.
134
+ // Usually this should never be the case because SmallPanelWidth^2 is very small
135
+ // compared to L2 cache size, but let's be safe:
136
+ Index panelWidth = (std::min)(Index(SmallPanelWidth),(std::min)(kc,mc));
137
+
138
+ std::size_t sizeA = kc*mc;
139
+ std::size_t sizeB = kc*cols;
140
+
141
+ ei_declare_aligned_stack_constructed_variable(Scalar, blockA, sizeA, blocking.blockA());
142
+ ei_declare_aligned_stack_constructed_variable(Scalar, blockB, sizeB, blocking.blockB());
143
+
144
+ // To work around an "error: member reference base type 'Matrix<...>
145
+ // (Eigen::internal::constructor_without_unaligned_array_assert (*)())' is
146
+ // not a structure or union" compilation error in nvcc (tested V8.0.61),
147
+ // create a dummy internal::constructor_without_unaligned_array_assert
148
+ // object to pass to the Matrix constructor.
149
+ internal::constructor_without_unaligned_array_assert a;
150
+ Matrix<Scalar,SmallPanelWidth,SmallPanelWidth,LhsStorageOrder> triangularBuffer(a);
151
+ triangularBuffer.setZero();
152
+ if((Mode&ZeroDiag)==ZeroDiag)
153
+ triangularBuffer.diagonal().setZero();
154
+ else
155
+ triangularBuffer.diagonal().setOnes();
156
+
157
+ gebp_kernel<Scalar, Scalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp_kernel;
158
+ gemm_pack_lhs<Scalar, Index, LhsMapper, Traits::mr, Traits::LhsProgress, typename Traits::LhsPacket4Packing, LhsStorageOrder> pack_lhs;
159
+ gemm_pack_rhs<Scalar, Index, RhsMapper, Traits::nr,RhsStorageOrder> pack_rhs;
160
+
161
+ for(Index k2=IsLower ? depth : 0;
162
+ IsLower ? k2>0 : k2<depth;
163
+ IsLower ? k2-=kc : k2+=kc)
164
+ {
165
+ Index actual_kc = (std::min)(IsLower ? k2 : depth-k2, kc);
166
+ Index actual_k2 = IsLower ? k2-actual_kc : k2;
167
+
168
+ // align blocks with the end of the triangular part for trapezoidal lhs
169
+ if((!IsLower)&&(k2<rows)&&(k2+actual_kc>rows))
170
+ {
171
+ actual_kc = rows-k2;
172
+ k2 = k2+actual_kc-kc;
173
+ }
174
+
175
+ pack_rhs(blockB, rhs.getSubMapper(actual_k2,0), actual_kc, cols);
176
+
177
+ // the selected lhs's panel has to be split in three different parts:
178
+ // 1 - the part which is zero => skip it
179
+ // 2 - the diagonal block => special kernel
180
+ // 3 - the dense panel below (lower case) or above (upper case) the diagonal block => GEPP
181
+
182
+ // the block diagonal, if any:
183
+ if(IsLower || actual_k2<rows)
184
+ {
185
+ // for each small vertical panels of lhs
186
+ for (Index k1=0; k1<actual_kc; k1+=panelWidth)
187
+ {
188
+ Index actualPanelWidth = std::min<Index>(actual_kc-k1, panelWidth);
189
+ Index lengthTarget = IsLower ? actual_kc-k1-actualPanelWidth : k1;
190
+ Index startBlock = actual_k2+k1;
191
+ Index blockBOffset = k1;
192
+
193
+ // => GEBP with the micro triangular block
194
+ // The trick is to pack this micro block while filling the opposite triangular part with zeros.
195
+ // To this end we do an extra triangular copy to a small temporary buffer
196
+ for (Index k=0;k<actualPanelWidth;++k)
197
+ {
198
+ if (SetDiag)
199
+ triangularBuffer.coeffRef(k,k) = lhs(startBlock+k,startBlock+k);
200
+ for (Index i=IsLower ? k+1 : 0; IsLower ? i<actualPanelWidth : i<k; ++i)
201
+ triangularBuffer.coeffRef(i,k) = lhs(startBlock+i,startBlock+k);
202
+ }
203
+ pack_lhs(blockA, LhsMapper(triangularBuffer.data(), triangularBuffer.outerStride()), actualPanelWidth, actualPanelWidth);
204
+
205
+ gebp_kernel(res.getSubMapper(startBlock, 0), blockA, blockB,
206
+ actualPanelWidth, actualPanelWidth, cols, alpha,
207
+ actualPanelWidth, actual_kc, 0, blockBOffset);
208
+
209
+ // GEBP with remaining micro panel
210
+ if (lengthTarget>0)
211
+ {
212
+ Index startTarget = IsLower ? actual_k2+k1+actualPanelWidth : actual_k2;
213
+
214
+ pack_lhs(blockA, lhs.getSubMapper(startTarget,startBlock), actualPanelWidth, lengthTarget);
215
+
216
+ gebp_kernel(res.getSubMapper(startTarget, 0), blockA, blockB,
217
+ lengthTarget, actualPanelWidth, cols, alpha,
218
+ actualPanelWidth, actual_kc, 0, blockBOffset);
219
+ }
220
+ }
221
+ }
222
+ // the part below (lower case) or above (upper case) the diagonal => GEPP
223
+ {
224
+ Index start = IsLower ? k2 : 0;
225
+ Index end = IsLower ? rows : (std::min)(actual_k2,rows);
226
+ for(Index i2=start; i2<end; i2+=mc)
227
+ {
228
+ const Index actual_mc = (std::min)(i2+mc,end)-i2;
229
+ gemm_pack_lhs<Scalar, Index, LhsMapper, Traits::mr,Traits::LhsProgress, typename Traits::LhsPacket4Packing, LhsStorageOrder,false>()
230
+ (blockA, lhs.getSubMapper(i2, actual_k2), actual_kc, actual_mc);
231
+
232
+ gebp_kernel(res.getSubMapper(i2, 0), blockA, blockB, actual_mc,
233
+ actual_kc, cols, alpha, -1, -1, 0, 0);
234
+ }
235
+ }
236
+ }
237
+ }
238
+
239
+ // implements col-major += alpha * op(general) * op(triangular)
240
+ template <typename Scalar, typename Index, int Mode,
241
+ int LhsStorageOrder, bool ConjugateLhs,
242
+ int RhsStorageOrder, bool ConjugateRhs,
243
+ int ResInnerStride, int Version>
244
+ struct product_triangular_matrix_matrix<Scalar,Index,Mode,false,
245
+ LhsStorageOrder,ConjugateLhs,
246
+ RhsStorageOrder,ConjugateRhs,ColMajor,ResInnerStride,Version>
247
+ {
248
+ typedef gebp_traits<Scalar,Scalar> Traits;
249
+ enum {
250
+ SmallPanelWidth = EIGEN_PLAIN_ENUM_MAX(Traits::mr,Traits::nr),
251
+ IsLower = (Mode&Lower) == Lower,
252
+ SetDiag = (Mode&(ZeroDiag|UnitDiag)) ? 0 : 1
253
+ };
254
+
255
+ static EIGEN_DONT_INLINE void run(
256
+ Index _rows, Index _cols, Index _depth,
257
+ const Scalar* _lhs, Index lhsStride,
258
+ const Scalar* _rhs, Index rhsStride,
259
+ Scalar* res, Index resIncr, Index resStride,
260
+ const Scalar& alpha, level3_blocking<Scalar,Scalar>& blocking);
261
+ };
262
+
263
+ template <typename Scalar, typename Index, int Mode,
264
+ int LhsStorageOrder, bool ConjugateLhs,
265
+ int RhsStorageOrder, bool ConjugateRhs,
266
+ int ResInnerStride, int Version>
267
+ EIGEN_DONT_INLINE void product_triangular_matrix_matrix<Scalar,Index,Mode,false,
268
+ LhsStorageOrder,ConjugateLhs,
269
+ RhsStorageOrder,ConjugateRhs,ColMajor,ResInnerStride,Version>::run(
270
+ Index _rows, Index _cols, Index _depth,
271
+ const Scalar* _lhs, Index lhsStride,
272
+ const Scalar* _rhs, Index rhsStride,
273
+ Scalar* _res, Index resIncr, Index resStride,
274
+ const Scalar& alpha, level3_blocking<Scalar,Scalar>& blocking)
275
+ {
276
+ const Index PacketBytes = packet_traits<Scalar>::size*sizeof(Scalar);
277
+ // strip zeros
278
+ Index diagSize = (std::min)(_cols,_depth);
279
+ Index rows = _rows;
280
+ Index depth = IsLower ? _depth : diagSize;
281
+ Index cols = IsLower ? diagSize : _cols;
282
+
283
+ typedef const_blas_data_mapper<Scalar, Index, LhsStorageOrder> LhsMapper;
284
+ typedef const_blas_data_mapper<Scalar, Index, RhsStorageOrder> RhsMapper;
285
+ typedef blas_data_mapper<typename Traits::ResScalar, Index, ColMajor, Unaligned, ResInnerStride> ResMapper;
286
+ LhsMapper lhs(_lhs,lhsStride);
287
+ RhsMapper rhs(_rhs,rhsStride);
288
+ ResMapper res(_res, resStride, resIncr);
289
+
290
+ Index kc = blocking.kc(); // cache block size along the K direction
291
+ Index mc = (std::min)(rows,blocking.mc()); // cache block size along the M direction
292
+
293
+ std::size_t sizeA = kc*mc;
294
+ std::size_t sizeB = kc*cols+EIGEN_MAX_ALIGN_BYTES/sizeof(Scalar);
295
+
296
+ ei_declare_aligned_stack_constructed_variable(Scalar, blockA, sizeA, blocking.blockA());
297
+ ei_declare_aligned_stack_constructed_variable(Scalar, blockB, sizeB, blocking.blockB());
298
+
299
+ internal::constructor_without_unaligned_array_assert a;
300
+ Matrix<Scalar,SmallPanelWidth,SmallPanelWidth,RhsStorageOrder> triangularBuffer(a);
301
+ triangularBuffer.setZero();
302
+ if((Mode&ZeroDiag)==ZeroDiag)
303
+ triangularBuffer.diagonal().setZero();
304
+ else
305
+ triangularBuffer.diagonal().setOnes();
306
+
307
+ gebp_kernel<Scalar, Scalar, Index, ResMapper, Traits::mr, Traits::nr, ConjugateLhs, ConjugateRhs> gebp_kernel;
308
+ gemm_pack_lhs<Scalar, Index, LhsMapper, Traits::mr, Traits::LhsProgress, typename Traits::LhsPacket4Packing, LhsStorageOrder> pack_lhs;
309
+ gemm_pack_rhs<Scalar, Index, RhsMapper, Traits::nr,RhsStorageOrder> pack_rhs;
310
+ gemm_pack_rhs<Scalar, Index, RhsMapper, Traits::nr,RhsStorageOrder,false,true> pack_rhs_panel;
311
+
312
+ for(Index k2=IsLower ? 0 : depth;
313
+ IsLower ? k2<depth : k2>0;
314
+ IsLower ? k2+=kc : k2-=kc)
315
+ {
316
+ Index actual_kc = (std::min)(IsLower ? depth-k2 : k2, kc);
317
+ Index actual_k2 = IsLower ? k2 : k2-actual_kc;
318
+
319
+ // align blocks with the end of the triangular part for trapezoidal rhs
320
+ if(IsLower && (k2<cols) && (actual_k2+actual_kc>cols))
321
+ {
322
+ actual_kc = cols-k2;
323
+ k2 = actual_k2 + actual_kc - kc;
324
+ }
325
+
326
+ // remaining size
327
+ Index rs = IsLower ? (std::min)(cols,actual_k2) : cols - k2;
328
+ // size of the triangular part
329
+ Index ts = (IsLower && actual_k2>=cols) ? 0 : actual_kc;
330
+
331
+ Scalar* geb = blockB+ts*ts;
332
+ geb = geb + internal::first_aligned<PacketBytes>(geb,PacketBytes/sizeof(Scalar));
333
+
334
+ pack_rhs(geb, rhs.getSubMapper(actual_k2,IsLower ? 0 : k2), actual_kc, rs);
335
+
336
+ // pack the triangular part of the rhs padding the unrolled blocks with zeros
337
+ if(ts>0)
338
+ {
339
+ for (Index j2=0; j2<actual_kc; j2+=SmallPanelWidth)
340
+ {
341
+ Index actualPanelWidth = std::min<Index>(actual_kc-j2, SmallPanelWidth);
342
+ Index actual_j2 = actual_k2 + j2;
343
+ Index panelOffset = IsLower ? j2+actualPanelWidth : 0;
344
+ Index panelLength = IsLower ? actual_kc-j2-actualPanelWidth : j2;
345
+ // general part
346
+ pack_rhs_panel(blockB+j2*actual_kc,
347
+ rhs.getSubMapper(actual_k2+panelOffset, actual_j2),
348
+ panelLength, actualPanelWidth,
349
+ actual_kc, panelOffset);
350
+
351
+ // append the triangular part via a temporary buffer
352
+ for (Index j=0;j<actualPanelWidth;++j)
353
+ {
354
+ if (SetDiag)
355
+ triangularBuffer.coeffRef(j,j) = rhs(actual_j2+j,actual_j2+j);
356
+ for (Index k=IsLower ? j+1 : 0; IsLower ? k<actualPanelWidth : k<j; ++k)
357
+ triangularBuffer.coeffRef(k,j) = rhs(actual_j2+k,actual_j2+j);
358
+ }
359
+
360
+ pack_rhs_panel(blockB+j2*actual_kc,
361
+ RhsMapper(triangularBuffer.data(), triangularBuffer.outerStride()),
362
+ actualPanelWidth, actualPanelWidth,
363
+ actual_kc, j2);
364
+ }
365
+ }
366
+
367
+ for (Index i2=0; i2<rows; i2+=mc)
368
+ {
369
+ const Index actual_mc = (std::min)(mc,rows-i2);
370
+ pack_lhs(blockA, lhs.getSubMapper(i2, actual_k2), actual_kc, actual_mc);
371
+
372
+ // triangular kernel
373
+ if(ts>0)
374
+ {
375
+ for (Index j2=0; j2<actual_kc; j2+=SmallPanelWidth)
376
+ {
377
+ Index actualPanelWidth = std::min<Index>(actual_kc-j2, SmallPanelWidth);
378
+ Index panelLength = IsLower ? actual_kc-j2 : j2+actualPanelWidth;
379
+ Index blockOffset = IsLower ? j2 : 0;
380
+
381
+ gebp_kernel(res.getSubMapper(i2, actual_k2 + j2),
382
+ blockA, blockB+j2*actual_kc,
383
+ actual_mc, panelLength, actualPanelWidth,
384
+ alpha,
385
+ actual_kc, actual_kc, // strides
386
+ blockOffset, blockOffset);// offsets
387
+ }
388
+ }
389
+ gebp_kernel(res.getSubMapper(i2, IsLower ? 0 : k2),
390
+ blockA, geb, actual_mc, actual_kc, rs,
391
+ alpha,
392
+ -1, -1, 0, 0);
393
+ }
394
+ }
395
+ }
396
+
397
+ /***************************************************************************
398
+ * Wrapper to product_triangular_matrix_matrix
399
+ ***************************************************************************/
400
+
401
+ } // end namespace internal
402
+
403
+ namespace internal {
404
+ template<int Mode, bool LhsIsTriangular, typename Lhs, typename Rhs>
405
+ struct triangular_product_impl<Mode,LhsIsTriangular,Lhs,false,Rhs,false>
406
+ {
407
+ template<typename Dest> static void run(Dest& dst, const Lhs &a_lhs, const Rhs &a_rhs, const typename Dest::Scalar& alpha)
408
+ {
409
+ typedef typename Lhs::Scalar LhsScalar;
410
+ typedef typename Rhs::Scalar RhsScalar;
411
+ typedef typename Dest::Scalar Scalar;
412
+
413
+ typedef internal::blas_traits<Lhs> LhsBlasTraits;
414
+ typedef typename LhsBlasTraits::DirectLinearAccessType ActualLhsType;
415
+ typedef typename internal::remove_all<ActualLhsType>::type ActualLhsTypeCleaned;
416
+ typedef internal::blas_traits<Rhs> RhsBlasTraits;
417
+ typedef typename RhsBlasTraits::DirectLinearAccessType ActualRhsType;
418
+ typedef typename internal::remove_all<ActualRhsType>::type ActualRhsTypeCleaned;
419
+
420
+ typename internal::add_const_on_value_type<ActualLhsType>::type lhs = LhsBlasTraits::extract(a_lhs);
421
+ typename internal::add_const_on_value_type<ActualRhsType>::type rhs = RhsBlasTraits::extract(a_rhs);
422
+
423
+ LhsScalar lhs_alpha = LhsBlasTraits::extractScalarFactor(a_lhs);
424
+ RhsScalar rhs_alpha = RhsBlasTraits::extractScalarFactor(a_rhs);
425
+ Scalar actualAlpha = alpha * lhs_alpha * rhs_alpha;
426
+
427
+ typedef internal::gemm_blocking_space<(Dest::Flags&RowMajorBit) ? RowMajor : ColMajor,Scalar,Scalar,
428
+ Lhs::MaxRowsAtCompileTime, Rhs::MaxColsAtCompileTime, Lhs::MaxColsAtCompileTime,4> BlockingType;
429
+
430
+ enum { IsLower = (Mode&Lower) == Lower };
431
+ Index stripedRows = ((!LhsIsTriangular) || (IsLower)) ? lhs.rows() : (std::min)(lhs.rows(),lhs.cols());
432
+ Index stripedCols = ((LhsIsTriangular) || (!IsLower)) ? rhs.cols() : (std::min)(rhs.cols(),rhs.rows());
433
+ Index stripedDepth = LhsIsTriangular ? ((!IsLower) ? lhs.cols() : (std::min)(lhs.cols(),lhs.rows()))
434
+ : ((IsLower) ? rhs.rows() : (std::min)(rhs.rows(),rhs.cols()));
435
+
436
+ BlockingType blocking(stripedRows, stripedCols, stripedDepth, 1, false);
437
+
438
+ internal::product_triangular_matrix_matrix<Scalar, Index,
439
+ Mode, LhsIsTriangular,
440
+ (internal::traits<ActualLhsTypeCleaned>::Flags&RowMajorBit) ? RowMajor : ColMajor, LhsBlasTraits::NeedToConjugate,
441
+ (internal::traits<ActualRhsTypeCleaned>::Flags&RowMajorBit) ? RowMajor : ColMajor, RhsBlasTraits::NeedToConjugate,
442
+ (internal::traits<Dest >::Flags&RowMajorBit) ? RowMajor : ColMajor, Dest::InnerStrideAtCompileTime>
443
+ ::run(
444
+ stripedRows, stripedCols, stripedDepth, // sizes
445
+ &lhs.coeffRef(0,0), lhs.outerStride(), // lhs info
446
+ &rhs.coeffRef(0,0), rhs.outerStride(), // rhs info
447
+ &dst.coeffRef(0,0), dst.innerStride(), dst.outerStride(), // result info
448
+ actualAlpha, blocking
449
+ );
450
+
451
+ // Apply correction if the diagonal is unit and a scalar factor was nested:
452
+ if ((Mode&UnitDiag)==UnitDiag)
453
+ {
454
+ if (LhsIsTriangular && lhs_alpha!=LhsScalar(1))
455
+ {
456
+ Index diagSize = (std::min)(lhs.rows(),lhs.cols());
457
+ dst.topRows(diagSize) -= ((lhs_alpha-LhsScalar(1))*a_rhs).topRows(diagSize);
458
+ }
459
+ else if ((!LhsIsTriangular) && rhs_alpha!=RhsScalar(1))
460
+ {
461
+ Index diagSize = (std::min)(rhs.rows(),rhs.cols());
462
+ dst.leftCols(diagSize) -= (rhs_alpha-RhsScalar(1))*a_lhs.leftCols(diagSize);
463
+ }
464
+ }
465
+ }
466
+ };
467
+
468
+ } // end namespace internal
469
+
470
+ } // end namespace Eigen
471
+
472
+ #endif // EIGEN_TRIANGULAR_MATRIX_MATRIX_H