umappp 0.1.2

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Files changed (395) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE.txt +25 -0
  3. data/README.md +110 -0
  4. data/ext/umappp/extconf.rb +25 -0
  5. data/ext/umappp/numo.hpp +867 -0
  6. data/ext/umappp/umappp.cpp +225 -0
  7. data/lib/umappp/version.rb +5 -0
  8. data/lib/umappp.rb +41 -0
  9. data/vendor/Eigen/Cholesky +45 -0
  10. data/vendor/Eigen/CholmodSupport +48 -0
  11. data/vendor/Eigen/Core +384 -0
  12. data/vendor/Eigen/Dense +7 -0
  13. data/vendor/Eigen/Eigen +2 -0
  14. data/vendor/Eigen/Eigenvalues +60 -0
  15. data/vendor/Eigen/Geometry +59 -0
  16. data/vendor/Eigen/Householder +29 -0
  17. data/vendor/Eigen/IterativeLinearSolvers +48 -0
  18. data/vendor/Eigen/Jacobi +32 -0
  19. data/vendor/Eigen/KLUSupport +41 -0
  20. data/vendor/Eigen/LU +47 -0
  21. data/vendor/Eigen/MetisSupport +35 -0
  22. data/vendor/Eigen/OrderingMethods +70 -0
  23. data/vendor/Eigen/PaStiXSupport +49 -0
  24. data/vendor/Eigen/PardisoSupport +35 -0
  25. data/vendor/Eigen/QR +50 -0
  26. data/vendor/Eigen/QtAlignedMalloc +39 -0
  27. data/vendor/Eigen/SPQRSupport +34 -0
  28. data/vendor/Eigen/SVD +50 -0
  29. data/vendor/Eigen/Sparse +34 -0
  30. data/vendor/Eigen/SparseCholesky +37 -0
  31. data/vendor/Eigen/SparseCore +69 -0
  32. data/vendor/Eigen/SparseLU +50 -0
  33. data/vendor/Eigen/SparseQR +36 -0
  34. data/vendor/Eigen/StdDeque +27 -0
  35. data/vendor/Eigen/StdList +26 -0
  36. data/vendor/Eigen/StdVector +27 -0
  37. data/vendor/Eigen/SuperLUSupport +64 -0
  38. data/vendor/Eigen/UmfPackSupport +40 -0
  39. data/vendor/Eigen/src/Cholesky/LDLT.h +688 -0
  40. data/vendor/Eigen/src/Cholesky/LLT.h +558 -0
  41. data/vendor/Eigen/src/Cholesky/LLT_LAPACKE.h +99 -0
  42. data/vendor/Eigen/src/CholmodSupport/CholmodSupport.h +682 -0
  43. data/vendor/Eigen/src/Core/ArithmeticSequence.h +413 -0
  44. data/vendor/Eigen/src/Core/Array.h +417 -0
  45. data/vendor/Eigen/src/Core/ArrayBase.h +226 -0
  46. data/vendor/Eigen/src/Core/ArrayWrapper.h +209 -0
  47. data/vendor/Eigen/src/Core/Assign.h +90 -0
  48. data/vendor/Eigen/src/Core/AssignEvaluator.h +1010 -0
  49. data/vendor/Eigen/src/Core/Assign_MKL.h +178 -0
  50. data/vendor/Eigen/src/Core/BandMatrix.h +353 -0
  51. data/vendor/Eigen/src/Core/Block.h +448 -0
  52. data/vendor/Eigen/src/Core/BooleanRedux.h +162 -0
  53. data/vendor/Eigen/src/Core/CommaInitializer.h +164 -0
  54. data/vendor/Eigen/src/Core/ConditionEstimator.h +175 -0
  55. data/vendor/Eigen/src/Core/CoreEvaluators.h +1741 -0
  56. data/vendor/Eigen/src/Core/CoreIterators.h +132 -0
  57. data/vendor/Eigen/src/Core/CwiseBinaryOp.h +183 -0
  58. data/vendor/Eigen/src/Core/CwiseNullaryOp.h +1001 -0
  59. data/vendor/Eigen/src/Core/CwiseTernaryOp.h +197 -0
  60. data/vendor/Eigen/src/Core/CwiseUnaryOp.h +103 -0
  61. data/vendor/Eigen/src/Core/CwiseUnaryView.h +132 -0
  62. data/vendor/Eigen/src/Core/DenseBase.h +701 -0
  63. data/vendor/Eigen/src/Core/DenseCoeffsBase.h +685 -0
  64. data/vendor/Eigen/src/Core/DenseStorage.h +652 -0
  65. data/vendor/Eigen/src/Core/Diagonal.h +258 -0
  66. data/vendor/Eigen/src/Core/DiagonalMatrix.h +391 -0
  67. data/vendor/Eigen/src/Core/DiagonalProduct.h +28 -0
  68. data/vendor/Eigen/src/Core/Dot.h +318 -0
  69. data/vendor/Eigen/src/Core/EigenBase.h +160 -0
  70. data/vendor/Eigen/src/Core/ForceAlignedAccess.h +150 -0
  71. data/vendor/Eigen/src/Core/Fuzzy.h +155 -0
  72. data/vendor/Eigen/src/Core/GeneralProduct.h +465 -0
  73. data/vendor/Eigen/src/Core/GenericPacketMath.h +1040 -0
  74. data/vendor/Eigen/src/Core/GlobalFunctions.h +194 -0
  75. data/vendor/Eigen/src/Core/IO.h +258 -0
  76. data/vendor/Eigen/src/Core/IndexedView.h +237 -0
  77. data/vendor/Eigen/src/Core/Inverse.h +117 -0
  78. data/vendor/Eigen/src/Core/Map.h +171 -0
  79. data/vendor/Eigen/src/Core/MapBase.h +310 -0
  80. data/vendor/Eigen/src/Core/MathFunctions.h +2057 -0
  81. data/vendor/Eigen/src/Core/MathFunctionsImpl.h +200 -0
  82. data/vendor/Eigen/src/Core/Matrix.h +565 -0
  83. data/vendor/Eigen/src/Core/MatrixBase.h +547 -0
  84. data/vendor/Eigen/src/Core/NestByValue.h +85 -0
  85. data/vendor/Eigen/src/Core/NoAlias.h +109 -0
  86. data/vendor/Eigen/src/Core/NumTraits.h +335 -0
  87. data/vendor/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  88. data/vendor/Eigen/src/Core/PermutationMatrix.h +605 -0
  89. data/vendor/Eigen/src/Core/PlainObjectBase.h +1128 -0
  90. data/vendor/Eigen/src/Core/Product.h +191 -0
  91. data/vendor/Eigen/src/Core/ProductEvaluators.h +1179 -0
  92. data/vendor/Eigen/src/Core/Random.h +218 -0
  93. data/vendor/Eigen/src/Core/Redux.h +515 -0
  94. data/vendor/Eigen/src/Core/Ref.h +381 -0
  95. data/vendor/Eigen/src/Core/Replicate.h +142 -0
  96. data/vendor/Eigen/src/Core/Reshaped.h +454 -0
  97. data/vendor/Eigen/src/Core/ReturnByValue.h +119 -0
  98. data/vendor/Eigen/src/Core/Reverse.h +217 -0
  99. data/vendor/Eigen/src/Core/Select.h +164 -0
  100. data/vendor/Eigen/src/Core/SelfAdjointView.h +365 -0
  101. data/vendor/Eigen/src/Core/SelfCwiseBinaryOp.h +47 -0
  102. data/vendor/Eigen/src/Core/Solve.h +188 -0
  103. data/vendor/Eigen/src/Core/SolveTriangular.h +235 -0
  104. data/vendor/Eigen/src/Core/SolverBase.h +168 -0
  105. data/vendor/Eigen/src/Core/StableNorm.h +251 -0
  106. data/vendor/Eigen/src/Core/StlIterators.h +463 -0
  107. data/vendor/Eigen/src/Core/Stride.h +116 -0
  108. data/vendor/Eigen/src/Core/Swap.h +68 -0
  109. data/vendor/Eigen/src/Core/Transpose.h +464 -0
  110. data/vendor/Eigen/src/Core/Transpositions.h +386 -0
  111. data/vendor/Eigen/src/Core/TriangularMatrix.h +1001 -0
  112. data/vendor/Eigen/src/Core/VectorBlock.h +96 -0
  113. data/vendor/Eigen/src/Core/VectorwiseOp.h +784 -0
  114. data/vendor/Eigen/src/Core/Visitor.h +381 -0
  115. data/vendor/Eigen/src/Core/arch/AVX/Complex.h +372 -0
  116. data/vendor/Eigen/src/Core/arch/AVX/MathFunctions.h +228 -0
  117. data/vendor/Eigen/src/Core/arch/AVX/PacketMath.h +1574 -0
  118. data/vendor/Eigen/src/Core/arch/AVX/TypeCasting.h +115 -0
  119. data/vendor/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  120. data/vendor/Eigen/src/Core/arch/AVX512/MathFunctions.h +362 -0
  121. data/vendor/Eigen/src/Core/arch/AVX512/PacketMath.h +2303 -0
  122. data/vendor/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  123. data/vendor/Eigen/src/Core/arch/AltiVec/Complex.h +417 -0
  124. data/vendor/Eigen/src/Core/arch/AltiVec/MathFunctions.h +90 -0
  125. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  126. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  127. data/vendor/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  128. data/vendor/Eigen/src/Core/arch/AltiVec/PacketMath.h +2711 -0
  129. data/vendor/Eigen/src/Core/arch/CUDA/Complex.h +258 -0
  130. data/vendor/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  131. data/vendor/Eigen/src/Core/arch/Default/ConjHelper.h +117 -0
  132. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  133. data/vendor/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  134. data/vendor/Eigen/src/Core/arch/Default/Half.h +942 -0
  135. data/vendor/Eigen/src/Core/arch/Default/Settings.h +49 -0
  136. data/vendor/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  137. data/vendor/Eigen/src/Core/arch/GPU/MathFunctions.h +103 -0
  138. data/vendor/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  139. data/vendor/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  140. data/vendor/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  141. data/vendor/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  142. data/vendor/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  143. data/vendor/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  144. data/vendor/Eigen/src/Core/arch/NEON/Complex.h +584 -0
  145. data/vendor/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  146. data/vendor/Eigen/src/Core/arch/NEON/MathFunctions.h +75 -0
  147. data/vendor/Eigen/src/Core/arch/NEON/PacketMath.h +4587 -0
  148. data/vendor/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  149. data/vendor/Eigen/src/Core/arch/SSE/Complex.h +351 -0
  150. data/vendor/Eigen/src/Core/arch/SSE/MathFunctions.h +199 -0
  151. data/vendor/Eigen/src/Core/arch/SSE/PacketMath.h +1505 -0
  152. data/vendor/Eigen/src/Core/arch/SSE/TypeCasting.h +142 -0
  153. data/vendor/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  154. data/vendor/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  155. data/vendor/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  156. data/vendor/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  157. data/vendor/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  158. data/vendor/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  159. data/vendor/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  160. data/vendor/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  161. data/vendor/Eigen/src/Core/arch/ZVector/Complex.h +426 -0
  162. data/vendor/Eigen/src/Core/arch/ZVector/MathFunctions.h +233 -0
  163. data/vendor/Eigen/src/Core/arch/ZVector/PacketMath.h +1060 -0
  164. data/vendor/Eigen/src/Core/functors/AssignmentFunctors.h +177 -0
  165. data/vendor/Eigen/src/Core/functors/BinaryFunctors.h +541 -0
  166. data/vendor/Eigen/src/Core/functors/NullaryFunctors.h +189 -0
  167. data/vendor/Eigen/src/Core/functors/StlFunctors.h +166 -0
  168. data/vendor/Eigen/src/Core/functors/TernaryFunctors.h +25 -0
  169. data/vendor/Eigen/src/Core/functors/UnaryFunctors.h +1131 -0
  170. data/vendor/Eigen/src/Core/products/GeneralBlockPanelKernel.h +2645 -0
  171. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix.h +517 -0
  172. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +317 -0
  173. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +145 -0
  174. data/vendor/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +124 -0
  175. data/vendor/Eigen/src/Core/products/GeneralMatrixVector.h +518 -0
  176. data/vendor/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +136 -0
  177. data/vendor/Eigen/src/Core/products/Parallelizer.h +180 -0
  178. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +544 -0
  179. data/vendor/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +295 -0
  180. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector.h +262 -0
  181. data/vendor/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +118 -0
  182. data/vendor/Eigen/src/Core/products/SelfadjointProduct.h +133 -0
  183. data/vendor/Eigen/src/Core/products/SelfadjointRank2Update.h +94 -0
  184. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix.h +472 -0
  185. data/vendor/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +317 -0
  186. data/vendor/Eigen/src/Core/products/TriangularMatrixVector.h +350 -0
  187. data/vendor/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +255 -0
  188. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix.h +337 -0
  189. data/vendor/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +167 -0
  190. data/vendor/Eigen/src/Core/products/TriangularSolverVector.h +148 -0
  191. data/vendor/Eigen/src/Core/util/BlasUtil.h +583 -0
  192. data/vendor/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  193. data/vendor/Eigen/src/Core/util/Constants.h +563 -0
  194. data/vendor/Eigen/src/Core/util/DisableStupidWarnings.h +106 -0
  195. data/vendor/Eigen/src/Core/util/ForwardDeclarations.h +322 -0
  196. data/vendor/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  197. data/vendor/Eigen/src/Core/util/IntegralConstant.h +272 -0
  198. data/vendor/Eigen/src/Core/util/MKL_support.h +137 -0
  199. data/vendor/Eigen/src/Core/util/Macros.h +1464 -0
  200. data/vendor/Eigen/src/Core/util/Memory.h +1163 -0
  201. data/vendor/Eigen/src/Core/util/Meta.h +812 -0
  202. data/vendor/Eigen/src/Core/util/NonMPL2.h +3 -0
  203. data/vendor/Eigen/src/Core/util/ReenableStupidWarnings.h +31 -0
  204. data/vendor/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  205. data/vendor/Eigen/src/Core/util/StaticAssert.h +221 -0
  206. data/vendor/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  207. data/vendor/Eigen/src/Core/util/XprHelper.h +856 -0
  208. data/vendor/Eigen/src/Eigenvalues/ComplexEigenSolver.h +346 -0
  209. data/vendor/Eigen/src/Eigenvalues/ComplexSchur.h +462 -0
  210. data/vendor/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +91 -0
  211. data/vendor/Eigen/src/Eigenvalues/EigenSolver.h +622 -0
  212. data/vendor/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +418 -0
  213. data/vendor/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +226 -0
  214. data/vendor/Eigen/src/Eigenvalues/HessenbergDecomposition.h +374 -0
  215. data/vendor/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +158 -0
  216. data/vendor/Eigen/src/Eigenvalues/RealQZ.h +657 -0
  217. data/vendor/Eigen/src/Eigenvalues/RealSchur.h +558 -0
  218. data/vendor/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +77 -0
  219. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +904 -0
  220. data/vendor/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +87 -0
  221. data/vendor/Eigen/src/Eigenvalues/Tridiagonalization.h +561 -0
  222. data/vendor/Eigen/src/Geometry/AlignedBox.h +486 -0
  223. data/vendor/Eigen/src/Geometry/AngleAxis.h +247 -0
  224. data/vendor/Eigen/src/Geometry/EulerAngles.h +114 -0
  225. data/vendor/Eigen/src/Geometry/Homogeneous.h +501 -0
  226. data/vendor/Eigen/src/Geometry/Hyperplane.h +282 -0
  227. data/vendor/Eigen/src/Geometry/OrthoMethods.h +235 -0
  228. data/vendor/Eigen/src/Geometry/ParametrizedLine.h +232 -0
  229. data/vendor/Eigen/src/Geometry/Quaternion.h +870 -0
  230. data/vendor/Eigen/src/Geometry/Rotation2D.h +199 -0
  231. data/vendor/Eigen/src/Geometry/RotationBase.h +206 -0
  232. data/vendor/Eigen/src/Geometry/Scaling.h +188 -0
  233. data/vendor/Eigen/src/Geometry/Transform.h +1563 -0
  234. data/vendor/Eigen/src/Geometry/Translation.h +202 -0
  235. data/vendor/Eigen/src/Geometry/Umeyama.h +166 -0
  236. data/vendor/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  237. data/vendor/Eigen/src/Householder/BlockHouseholder.h +110 -0
  238. data/vendor/Eigen/src/Householder/Householder.h +176 -0
  239. data/vendor/Eigen/src/Householder/HouseholderSequence.h +545 -0
  240. data/vendor/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +226 -0
  241. data/vendor/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +212 -0
  242. data/vendor/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +229 -0
  243. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +394 -0
  244. data/vendor/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +453 -0
  245. data/vendor/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +444 -0
  246. data/vendor/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +198 -0
  247. data/vendor/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +117 -0
  248. data/vendor/Eigen/src/Jacobi/Jacobi.h +483 -0
  249. data/vendor/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  250. data/vendor/Eigen/src/LU/Determinant.h +117 -0
  251. data/vendor/Eigen/src/LU/FullPivLU.h +877 -0
  252. data/vendor/Eigen/src/LU/InverseImpl.h +432 -0
  253. data/vendor/Eigen/src/LU/PartialPivLU.h +624 -0
  254. data/vendor/Eigen/src/LU/PartialPivLU_LAPACKE.h +83 -0
  255. data/vendor/Eigen/src/LU/arch/InverseSize4.h +351 -0
  256. data/vendor/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  257. data/vendor/Eigen/src/OrderingMethods/Amd.h +435 -0
  258. data/vendor/Eigen/src/OrderingMethods/Eigen_Colamd.h +1863 -0
  259. data/vendor/Eigen/src/OrderingMethods/Ordering.h +153 -0
  260. data/vendor/Eigen/src/PaStiXSupport/PaStiXSupport.h +678 -0
  261. data/vendor/Eigen/src/PardisoSupport/PardisoSupport.h +545 -0
  262. data/vendor/Eigen/src/QR/ColPivHouseholderQR.h +674 -0
  263. data/vendor/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +97 -0
  264. data/vendor/Eigen/src/QR/CompleteOrthogonalDecomposition.h +635 -0
  265. data/vendor/Eigen/src/QR/FullPivHouseholderQR.h +713 -0
  266. data/vendor/Eigen/src/QR/HouseholderQR.h +434 -0
  267. data/vendor/Eigen/src/QR/HouseholderQR_LAPACKE.h +68 -0
  268. data/vendor/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +335 -0
  269. data/vendor/Eigen/src/SVD/BDCSVD.h +1366 -0
  270. data/vendor/Eigen/src/SVD/JacobiSVD.h +812 -0
  271. data/vendor/Eigen/src/SVD/JacobiSVD_LAPACKE.h +91 -0
  272. data/vendor/Eigen/src/SVD/SVDBase.h +376 -0
  273. data/vendor/Eigen/src/SVD/UpperBidiagonalization.h +414 -0
  274. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky.h +697 -0
  275. data/vendor/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +174 -0
  276. data/vendor/Eigen/src/SparseCore/AmbiVector.h +378 -0
  277. data/vendor/Eigen/src/SparseCore/CompressedStorage.h +274 -0
  278. data/vendor/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +352 -0
  279. data/vendor/Eigen/src/SparseCore/MappedSparseMatrix.h +67 -0
  280. data/vendor/Eigen/src/SparseCore/SparseAssign.h +270 -0
  281. data/vendor/Eigen/src/SparseCore/SparseBlock.h +571 -0
  282. data/vendor/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  283. data/vendor/Eigen/src/SparseCore/SparseCompressedBase.h +370 -0
  284. data/vendor/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +722 -0
  285. data/vendor/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +150 -0
  286. data/vendor/Eigen/src/SparseCore/SparseDenseProduct.h +342 -0
  287. data/vendor/Eigen/src/SparseCore/SparseDiagonalProduct.h +138 -0
  288. data/vendor/Eigen/src/SparseCore/SparseDot.h +98 -0
  289. data/vendor/Eigen/src/SparseCore/SparseFuzzy.h +29 -0
  290. data/vendor/Eigen/src/SparseCore/SparseMap.h +305 -0
  291. data/vendor/Eigen/src/SparseCore/SparseMatrix.h +1518 -0
  292. data/vendor/Eigen/src/SparseCore/SparseMatrixBase.h +398 -0
  293. data/vendor/Eigen/src/SparseCore/SparsePermutation.h +178 -0
  294. data/vendor/Eigen/src/SparseCore/SparseProduct.h +181 -0
  295. data/vendor/Eigen/src/SparseCore/SparseRedux.h +49 -0
  296. data/vendor/Eigen/src/SparseCore/SparseRef.h +397 -0
  297. data/vendor/Eigen/src/SparseCore/SparseSelfAdjointView.h +659 -0
  298. data/vendor/Eigen/src/SparseCore/SparseSolverBase.h +124 -0
  299. data/vendor/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +198 -0
  300. data/vendor/Eigen/src/SparseCore/SparseTranspose.h +92 -0
  301. data/vendor/Eigen/src/SparseCore/SparseTriangularView.h +189 -0
  302. data/vendor/Eigen/src/SparseCore/SparseUtil.h +186 -0
  303. data/vendor/Eigen/src/SparseCore/SparseVector.h +478 -0
  304. data/vendor/Eigen/src/SparseCore/SparseView.h +254 -0
  305. data/vendor/Eigen/src/SparseCore/TriangularSolver.h +315 -0
  306. data/vendor/Eigen/src/SparseLU/SparseLU.h +923 -0
  307. data/vendor/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  308. data/vendor/Eigen/src/SparseLU/SparseLU_Memory.h +226 -0
  309. data/vendor/Eigen/src/SparseLU/SparseLU_Structs.h +110 -0
  310. data/vendor/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +375 -0
  311. data/vendor/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  312. data/vendor/Eigen/src/SparseLU/SparseLU_column_bmod.h +181 -0
  313. data/vendor/Eigen/src/SparseLU/SparseLU_column_dfs.h +179 -0
  314. data/vendor/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +107 -0
  315. data/vendor/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +280 -0
  316. data/vendor/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +126 -0
  317. data/vendor/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  318. data/vendor/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  319. data/vendor/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  320. data/vendor/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  321. data/vendor/Eigen/src/SparseLU/SparseLU_pruneL.h +136 -0
  322. data/vendor/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  323. data/vendor/Eigen/src/SparseQR/SparseQR.h +758 -0
  324. data/vendor/Eigen/src/StlSupport/StdDeque.h +116 -0
  325. data/vendor/Eigen/src/StlSupport/StdList.h +106 -0
  326. data/vendor/Eigen/src/StlSupport/StdVector.h +131 -0
  327. data/vendor/Eigen/src/StlSupport/details.h +84 -0
  328. data/vendor/Eigen/src/SuperLUSupport/SuperLUSupport.h +1025 -0
  329. data/vendor/Eigen/src/UmfPackSupport/UmfPackSupport.h +642 -0
  330. data/vendor/Eigen/src/misc/Image.h +82 -0
  331. data/vendor/Eigen/src/misc/Kernel.h +79 -0
  332. data/vendor/Eigen/src/misc/RealSvd2x2.h +55 -0
  333. data/vendor/Eigen/src/misc/blas.h +440 -0
  334. data/vendor/Eigen/src/misc/lapack.h +152 -0
  335. data/vendor/Eigen/src/misc/lapacke.h +16292 -0
  336. data/vendor/Eigen/src/misc/lapacke_mangling.h +17 -0
  337. data/vendor/Eigen/src/plugins/ArrayCwiseBinaryOps.h +358 -0
  338. data/vendor/Eigen/src/plugins/ArrayCwiseUnaryOps.h +696 -0
  339. data/vendor/Eigen/src/plugins/BlockMethods.h +1442 -0
  340. data/vendor/Eigen/src/plugins/CommonCwiseBinaryOps.h +115 -0
  341. data/vendor/Eigen/src/plugins/CommonCwiseUnaryOps.h +177 -0
  342. data/vendor/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  343. data/vendor/Eigen/src/plugins/MatrixCwiseBinaryOps.h +152 -0
  344. data/vendor/Eigen/src/plugins/MatrixCwiseUnaryOps.h +95 -0
  345. data/vendor/Eigen/src/plugins/ReshapedMethods.h +149 -0
  346. data/vendor/aarand/aarand.hpp +114 -0
  347. data/vendor/annoy/annoylib.h +1495 -0
  348. data/vendor/annoy/kissrandom.h +120 -0
  349. data/vendor/annoy/mman.h +242 -0
  350. data/vendor/hnswlib/bruteforce.h +152 -0
  351. data/vendor/hnswlib/hnswalg.h +1192 -0
  352. data/vendor/hnswlib/hnswlib.h +108 -0
  353. data/vendor/hnswlib/space_ip.h +282 -0
  354. data/vendor/hnswlib/space_l2.h +281 -0
  355. data/vendor/hnswlib/visited_list_pool.h +79 -0
  356. data/vendor/irlba/irlba.hpp +575 -0
  357. data/vendor/irlba/lanczos.hpp +212 -0
  358. data/vendor/irlba/parallel.hpp +474 -0
  359. data/vendor/irlba/utils.hpp +224 -0
  360. data/vendor/irlba/wrappers.hpp +228 -0
  361. data/vendor/kmeans/Base.hpp +75 -0
  362. data/vendor/kmeans/Details.hpp +79 -0
  363. data/vendor/kmeans/HartiganWong.hpp +492 -0
  364. data/vendor/kmeans/InitializeKmeansPP.hpp +144 -0
  365. data/vendor/kmeans/InitializeNone.hpp +44 -0
  366. data/vendor/kmeans/InitializePCAPartition.hpp +309 -0
  367. data/vendor/kmeans/InitializeRandom.hpp +91 -0
  368. data/vendor/kmeans/Kmeans.hpp +161 -0
  369. data/vendor/kmeans/Lloyd.hpp +134 -0
  370. data/vendor/kmeans/MiniBatch.hpp +269 -0
  371. data/vendor/kmeans/QuickSearch.hpp +179 -0
  372. data/vendor/kmeans/compute_centroids.hpp +32 -0
  373. data/vendor/kmeans/compute_wcss.hpp +27 -0
  374. data/vendor/kmeans/is_edge_case.hpp +42 -0
  375. data/vendor/kmeans/random.hpp +55 -0
  376. data/vendor/knncolle/Annoy/Annoy.hpp +193 -0
  377. data/vendor/knncolle/BruteForce/BruteForce.hpp +120 -0
  378. data/vendor/knncolle/Hnsw/Hnsw.hpp +225 -0
  379. data/vendor/knncolle/Kmknn/Kmknn.hpp +286 -0
  380. data/vendor/knncolle/VpTree/VpTree.hpp +256 -0
  381. data/vendor/knncolle/knncolle.hpp +34 -0
  382. data/vendor/knncolle/utils/Base.hpp +100 -0
  383. data/vendor/knncolle/utils/NeighborQueue.hpp +94 -0
  384. data/vendor/knncolle/utils/distances.hpp +98 -0
  385. data/vendor/knncolle/utils/find_nearest_neighbors.hpp +112 -0
  386. data/vendor/powerit/PowerIterations.hpp +157 -0
  387. data/vendor/umappp/NeighborList.hpp +37 -0
  388. data/vendor/umappp/Umap.hpp +662 -0
  389. data/vendor/umappp/combine_neighbor_sets.hpp +95 -0
  390. data/vendor/umappp/find_ab.hpp +157 -0
  391. data/vendor/umappp/neighbor_similarities.hpp +136 -0
  392. data/vendor/umappp/optimize_layout.hpp +285 -0
  393. data/vendor/umappp/spectral_init.hpp +181 -0
  394. data/vendor/umappp/umappp.hpp +13 -0
  395. metadata +465 -0
@@ -0,0 +1,318 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2006-2008, 2010 Benoit Jacob <jacob.benoit.1@gmail.com>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_DOT_H
11
+ #define EIGEN_DOT_H
12
+
13
+ namespace Eigen {
14
+
15
+ namespace internal {
16
+
17
+ // helper function for dot(). The problem is that if we put that in the body of dot(), then upon calling dot
18
+ // with mismatched types, the compiler emits errors about failing to instantiate cwiseProduct BEFORE
19
+ // looking at the static assertions. Thus this is a trick to get better compile errors.
20
+ template<typename T, typename U,
21
+ // the NeedToTranspose condition here is taken straight from Assign.h
22
+ bool NeedToTranspose = T::IsVectorAtCompileTime
23
+ && U::IsVectorAtCompileTime
24
+ && ((int(T::RowsAtCompileTime) == 1 && int(U::ColsAtCompileTime) == 1)
25
+ | // FIXME | instead of || to please GCC 4.4.0 stupid warning "suggest parentheses around &&".
26
+ // revert to || as soon as not needed anymore.
27
+ (int(T::ColsAtCompileTime) == 1 && int(U::RowsAtCompileTime) == 1))
28
+ >
29
+ struct dot_nocheck
30
+ {
31
+ typedef scalar_conj_product_op<typename traits<T>::Scalar,typename traits<U>::Scalar> conj_prod;
32
+ typedef typename conj_prod::result_type ResScalar;
33
+ EIGEN_DEVICE_FUNC
34
+ EIGEN_STRONG_INLINE
35
+ static ResScalar run(const MatrixBase<T>& a, const MatrixBase<U>& b)
36
+ {
37
+ return a.template binaryExpr<conj_prod>(b).sum();
38
+ }
39
+ };
40
+
41
+ template<typename T, typename U>
42
+ struct dot_nocheck<T, U, true>
43
+ {
44
+ typedef scalar_conj_product_op<typename traits<T>::Scalar,typename traits<U>::Scalar> conj_prod;
45
+ typedef typename conj_prod::result_type ResScalar;
46
+ EIGEN_DEVICE_FUNC
47
+ EIGEN_STRONG_INLINE
48
+ static ResScalar run(const MatrixBase<T>& a, const MatrixBase<U>& b)
49
+ {
50
+ return a.transpose().template binaryExpr<conj_prod>(b).sum();
51
+ }
52
+ };
53
+
54
+ } // end namespace internal
55
+
56
+ /** \fn MatrixBase::dot
57
+ * \returns the dot product of *this with other.
58
+ *
59
+ * \only_for_vectors
60
+ *
61
+ * \note If the scalar type is complex numbers, then this function returns the hermitian
62
+ * (sesquilinear) dot product, conjugate-linear in the first variable and linear in the
63
+ * second variable.
64
+ *
65
+ * \sa squaredNorm(), norm()
66
+ */
67
+ template<typename Derived>
68
+ template<typename OtherDerived>
69
+ EIGEN_DEVICE_FUNC
70
+ EIGEN_STRONG_INLINE
71
+ typename ScalarBinaryOpTraits<typename internal::traits<Derived>::Scalar,typename internal::traits<OtherDerived>::Scalar>::ReturnType
72
+ MatrixBase<Derived>::dot(const MatrixBase<OtherDerived>& other) const
73
+ {
74
+ EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived)
75
+ EIGEN_STATIC_ASSERT_VECTOR_ONLY(OtherDerived)
76
+ EIGEN_STATIC_ASSERT_SAME_VECTOR_SIZE(Derived,OtherDerived)
77
+ #if !(defined(EIGEN_NO_STATIC_ASSERT) && defined(EIGEN_NO_DEBUG))
78
+ typedef internal::scalar_conj_product_op<Scalar,typename OtherDerived::Scalar> func;
79
+ EIGEN_CHECK_BINARY_COMPATIBILIY(func,Scalar,typename OtherDerived::Scalar);
80
+ #endif
81
+
82
+ eigen_assert(size() == other.size());
83
+
84
+ return internal::dot_nocheck<Derived,OtherDerived>::run(*this, other);
85
+ }
86
+
87
+ //---------- implementation of L2 norm and related functions ----------
88
+
89
+ /** \returns, for vectors, the squared \em l2 norm of \c *this, and for matrices the squared Frobenius norm.
90
+ * In both cases, it consists in the sum of the square of all the matrix entries.
91
+ * For vectors, this is also equals to the dot product of \c *this with itself.
92
+ *
93
+ * \sa dot(), norm(), lpNorm()
94
+ */
95
+ template<typename Derived>
96
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename NumTraits<typename internal::traits<Derived>::Scalar>::Real MatrixBase<Derived>::squaredNorm() const
97
+ {
98
+ return numext::real((*this).cwiseAbs2().sum());
99
+ }
100
+
101
+ /** \returns, for vectors, the \em l2 norm of \c *this, and for matrices the Frobenius norm.
102
+ * In both cases, it consists in the square root of the sum of the square of all the matrix entries.
103
+ * For vectors, this is also equals to the square root of the dot product of \c *this with itself.
104
+ *
105
+ * \sa lpNorm(), dot(), squaredNorm()
106
+ */
107
+ template<typename Derived>
108
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE typename NumTraits<typename internal::traits<Derived>::Scalar>::Real MatrixBase<Derived>::norm() const
109
+ {
110
+ return numext::sqrt(squaredNorm());
111
+ }
112
+
113
+ /** \returns an expression of the quotient of \c *this by its own norm.
114
+ *
115
+ * \warning If the input vector is too small (i.e., this->norm()==0),
116
+ * then this function returns a copy of the input.
117
+ *
118
+ * \only_for_vectors
119
+ *
120
+ * \sa norm(), normalize()
121
+ */
122
+ template<typename Derived>
123
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::PlainObject
124
+ MatrixBase<Derived>::normalized() const
125
+ {
126
+ typedef typename internal::nested_eval<Derived,2>::type _Nested;
127
+ _Nested n(derived());
128
+ RealScalar z = n.squaredNorm();
129
+ // NOTE: after extensive benchmarking, this conditional does not impact performance, at least on recent x86 CPU
130
+ if(z>RealScalar(0))
131
+ return n / numext::sqrt(z);
132
+ else
133
+ return n;
134
+ }
135
+
136
+ /** Normalizes the vector, i.e. divides it by its own norm.
137
+ *
138
+ * \only_for_vectors
139
+ *
140
+ * \warning If the input vector is too small (i.e., this->norm()==0), then \c *this is left unchanged.
141
+ *
142
+ * \sa norm(), normalized()
143
+ */
144
+ template<typename Derived>
145
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void MatrixBase<Derived>::normalize()
146
+ {
147
+ RealScalar z = squaredNorm();
148
+ // NOTE: after extensive benchmarking, this conditional does not impact performance, at least on recent x86 CPU
149
+ if(z>RealScalar(0))
150
+ derived() /= numext::sqrt(z);
151
+ }
152
+
153
+ /** \returns an expression of the quotient of \c *this by its own norm while avoiding underflow and overflow.
154
+ *
155
+ * \only_for_vectors
156
+ *
157
+ * This method is analogue to the normalized() method, but it reduces the risk of
158
+ * underflow and overflow when computing the norm.
159
+ *
160
+ * \warning If the input vector is too small (i.e., this->norm()==0),
161
+ * then this function returns a copy of the input.
162
+ *
163
+ * \sa stableNorm(), stableNormalize(), normalized()
164
+ */
165
+ template<typename Derived>
166
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const typename MatrixBase<Derived>::PlainObject
167
+ MatrixBase<Derived>::stableNormalized() const
168
+ {
169
+ typedef typename internal::nested_eval<Derived,3>::type _Nested;
170
+ _Nested n(derived());
171
+ RealScalar w = n.cwiseAbs().maxCoeff();
172
+ RealScalar z = (n/w).squaredNorm();
173
+ if(z>RealScalar(0))
174
+ return n / (numext::sqrt(z)*w);
175
+ else
176
+ return n;
177
+ }
178
+
179
+ /** Normalizes the vector while avoid underflow and overflow
180
+ *
181
+ * \only_for_vectors
182
+ *
183
+ * This method is analogue to the normalize() method, but it reduces the risk of
184
+ * underflow and overflow when computing the norm.
185
+ *
186
+ * \warning If the input vector is too small (i.e., this->norm()==0), then \c *this is left unchanged.
187
+ *
188
+ * \sa stableNorm(), stableNormalized(), normalize()
189
+ */
190
+ template<typename Derived>
191
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void MatrixBase<Derived>::stableNormalize()
192
+ {
193
+ RealScalar w = cwiseAbs().maxCoeff();
194
+ RealScalar z = (derived()/w).squaredNorm();
195
+ if(z>RealScalar(0))
196
+ derived() /= numext::sqrt(z)*w;
197
+ }
198
+
199
+ //---------- implementation of other norms ----------
200
+
201
+ namespace internal {
202
+
203
+ template<typename Derived, int p>
204
+ struct lpNorm_selector
205
+ {
206
+ typedef typename NumTraits<typename traits<Derived>::Scalar>::Real RealScalar;
207
+ EIGEN_DEVICE_FUNC
208
+ static inline RealScalar run(const MatrixBase<Derived>& m)
209
+ {
210
+ EIGEN_USING_STD(pow)
211
+ return pow(m.cwiseAbs().array().pow(p).sum(), RealScalar(1)/p);
212
+ }
213
+ };
214
+
215
+ template<typename Derived>
216
+ struct lpNorm_selector<Derived, 1>
217
+ {
218
+ EIGEN_DEVICE_FUNC
219
+ static inline typename NumTraits<typename traits<Derived>::Scalar>::Real run(const MatrixBase<Derived>& m)
220
+ {
221
+ return m.cwiseAbs().sum();
222
+ }
223
+ };
224
+
225
+ template<typename Derived>
226
+ struct lpNorm_selector<Derived, 2>
227
+ {
228
+ EIGEN_DEVICE_FUNC
229
+ static inline typename NumTraits<typename traits<Derived>::Scalar>::Real run(const MatrixBase<Derived>& m)
230
+ {
231
+ return m.norm();
232
+ }
233
+ };
234
+
235
+ template<typename Derived>
236
+ struct lpNorm_selector<Derived, Infinity>
237
+ {
238
+ typedef typename NumTraits<typename traits<Derived>::Scalar>::Real RealScalar;
239
+ EIGEN_DEVICE_FUNC
240
+ static inline RealScalar run(const MatrixBase<Derived>& m)
241
+ {
242
+ if(Derived::SizeAtCompileTime==0 || (Derived::SizeAtCompileTime==Dynamic && m.size()==0))
243
+ return RealScalar(0);
244
+ return m.cwiseAbs().maxCoeff();
245
+ }
246
+ };
247
+
248
+ } // end namespace internal
249
+
250
+ /** \returns the \b coefficient-wise \f$ \ell^p \f$ norm of \c *this, that is, returns the p-th root of the sum of the p-th powers of the absolute values
251
+ * of the coefficients of \c *this. If \a p is the special value \a Eigen::Infinity, this function returns the \f$ \ell^\infty \f$
252
+ * norm, that is the maximum of the absolute values of the coefficients of \c *this.
253
+ *
254
+ * In all cases, if \c *this is empty, then the value 0 is returned.
255
+ *
256
+ * \note For matrices, this function does not compute the <a href="https://en.wikipedia.org/wiki/Operator_norm">operator-norm</a>. That is, if \c *this is a matrix, then its coefficients are interpreted as a 1D vector. Nonetheless, you can easily compute the 1-norm and \f$\infty\f$-norm matrix operator norms using \link TutorialReductionsVisitorsBroadcastingReductionsNorm partial reductions \endlink.
257
+ *
258
+ * \sa norm()
259
+ */
260
+ template<typename Derived>
261
+ template<int p>
262
+ #ifndef EIGEN_PARSED_BY_DOXYGEN
263
+ EIGEN_DEVICE_FUNC inline typename NumTraits<typename internal::traits<Derived>::Scalar>::Real
264
+ #else
265
+ EIGEN_DEVICE_FUNC MatrixBase<Derived>::RealScalar
266
+ #endif
267
+ MatrixBase<Derived>::lpNorm() const
268
+ {
269
+ return internal::lpNorm_selector<Derived, p>::run(*this);
270
+ }
271
+
272
+ //---------- implementation of isOrthogonal / isUnitary ----------
273
+
274
+ /** \returns true if *this is approximately orthogonal to \a other,
275
+ * within the precision given by \a prec.
276
+ *
277
+ * Example: \include MatrixBase_isOrthogonal.cpp
278
+ * Output: \verbinclude MatrixBase_isOrthogonal.out
279
+ */
280
+ template<typename Derived>
281
+ template<typename OtherDerived>
282
+ bool MatrixBase<Derived>::isOrthogonal
283
+ (const MatrixBase<OtherDerived>& other, const RealScalar& prec) const
284
+ {
285
+ typename internal::nested_eval<Derived,2>::type nested(derived());
286
+ typename internal::nested_eval<OtherDerived,2>::type otherNested(other.derived());
287
+ return numext::abs2(nested.dot(otherNested)) <= prec * prec * nested.squaredNorm() * otherNested.squaredNorm();
288
+ }
289
+
290
+ /** \returns true if *this is approximately an unitary matrix,
291
+ * within the precision given by \a prec. In the case where the \a Scalar
292
+ * type is real numbers, a unitary matrix is an orthogonal matrix, whence the name.
293
+ *
294
+ * \note This can be used to check whether a family of vectors forms an orthonormal basis.
295
+ * Indeed, \c m.isUnitary() returns true if and only if the columns (equivalently, the rows) of m form an
296
+ * orthonormal basis.
297
+ *
298
+ * Example: \include MatrixBase_isUnitary.cpp
299
+ * Output: \verbinclude MatrixBase_isUnitary.out
300
+ */
301
+ template<typename Derived>
302
+ bool MatrixBase<Derived>::isUnitary(const RealScalar& prec) const
303
+ {
304
+ typename internal::nested_eval<Derived,1>::type self(derived());
305
+ for(Index i = 0; i < cols(); ++i)
306
+ {
307
+ if(!internal::isApprox(self.col(i).squaredNorm(), static_cast<RealScalar>(1), prec))
308
+ return false;
309
+ for(Index j = 0; j < i; ++j)
310
+ if(!internal::isMuchSmallerThan(self.col(i).dot(self.col(j)), static_cast<Scalar>(1), prec))
311
+ return false;
312
+ }
313
+ return true;
314
+ }
315
+
316
+ } // end namespace Eigen
317
+
318
+ #endif // EIGEN_DOT_H
@@ -0,0 +1,160 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
5
+ // Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
6
+ //
7
+ // This Source Code Form is subject to the terms of the Mozilla
8
+ // Public License v. 2.0. If a copy of the MPL was not distributed
9
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
10
+
11
+ #ifndef EIGEN_EIGENBASE_H
12
+ #define EIGEN_EIGENBASE_H
13
+
14
+ namespace Eigen {
15
+
16
+ /** \class EigenBase
17
+ * \ingroup Core_Module
18
+ *
19
+ * Common base class for all classes T such that MatrixBase has an operator=(T) and a constructor MatrixBase(T).
20
+ *
21
+ * In other words, an EigenBase object is an object that can be copied into a MatrixBase.
22
+ *
23
+ * Besides MatrixBase-derived classes, this also includes special matrix classes such as diagonal matrices, etc.
24
+ *
25
+ * Notice that this class is trivial, it is only used to disambiguate overloaded functions.
26
+ *
27
+ * \sa \blank \ref TopicClassHierarchy
28
+ */
29
+ template<typename Derived> struct EigenBase
30
+ {
31
+ // typedef typename internal::plain_matrix_type<Derived>::type PlainObject;
32
+
33
+ /** \brief The interface type of indices
34
+ * \details To change this, \c \#define the preprocessor symbol \c EIGEN_DEFAULT_DENSE_INDEX_TYPE.
35
+ * \sa StorageIndex, \ref TopicPreprocessorDirectives.
36
+ * DEPRECATED: Since Eigen 3.3, its usage is deprecated. Use Eigen::Index instead.
37
+ * Deprecation is not marked with a doxygen comment because there are too many existing usages to add the deprecation attribute.
38
+ */
39
+ typedef Eigen::Index Index;
40
+
41
+ // FIXME is it needed?
42
+ typedef typename internal::traits<Derived>::StorageKind StorageKind;
43
+
44
+ /** \returns a reference to the derived object */
45
+ EIGEN_DEVICE_FUNC
46
+ Derived& derived() { return *static_cast<Derived*>(this); }
47
+ /** \returns a const reference to the derived object */
48
+ EIGEN_DEVICE_FUNC
49
+ const Derived& derived() const { return *static_cast<const Derived*>(this); }
50
+
51
+ EIGEN_DEVICE_FUNC
52
+ inline Derived& const_cast_derived() const
53
+ { return *static_cast<Derived*>(const_cast<EigenBase*>(this)); }
54
+ EIGEN_DEVICE_FUNC
55
+ inline const Derived& const_derived() const
56
+ { return *static_cast<const Derived*>(this); }
57
+
58
+ /** \returns the number of rows. \sa cols(), RowsAtCompileTime */
59
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
60
+ inline Index rows() const EIGEN_NOEXCEPT { return derived().rows(); }
61
+ /** \returns the number of columns. \sa rows(), ColsAtCompileTime*/
62
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
63
+ inline Index cols() const EIGEN_NOEXCEPT { return derived().cols(); }
64
+ /** \returns the number of coefficients, which is rows()*cols().
65
+ * \sa rows(), cols(), SizeAtCompileTime. */
66
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
67
+ inline Index size() const EIGEN_NOEXCEPT { return rows() * cols(); }
68
+
69
+ /** \internal Don't use it, but do the equivalent: \code dst = *this; \endcode */
70
+ template<typename Dest>
71
+ EIGEN_DEVICE_FUNC
72
+ inline void evalTo(Dest& dst) const
73
+ { derived().evalTo(dst); }
74
+
75
+ /** \internal Don't use it, but do the equivalent: \code dst += *this; \endcode */
76
+ template<typename Dest>
77
+ EIGEN_DEVICE_FUNC
78
+ inline void addTo(Dest& dst) const
79
+ {
80
+ // This is the default implementation,
81
+ // derived class can reimplement it in a more optimized way.
82
+ typename Dest::PlainObject res(rows(),cols());
83
+ evalTo(res);
84
+ dst += res;
85
+ }
86
+
87
+ /** \internal Don't use it, but do the equivalent: \code dst -= *this; \endcode */
88
+ template<typename Dest>
89
+ EIGEN_DEVICE_FUNC
90
+ inline void subTo(Dest& dst) const
91
+ {
92
+ // This is the default implementation,
93
+ // derived class can reimplement it in a more optimized way.
94
+ typename Dest::PlainObject res(rows(),cols());
95
+ evalTo(res);
96
+ dst -= res;
97
+ }
98
+
99
+ /** \internal Don't use it, but do the equivalent: \code dst.applyOnTheRight(*this); \endcode */
100
+ template<typename Dest>
101
+ EIGEN_DEVICE_FUNC inline void applyThisOnTheRight(Dest& dst) const
102
+ {
103
+ // This is the default implementation,
104
+ // derived class can reimplement it in a more optimized way.
105
+ dst = dst * this->derived();
106
+ }
107
+
108
+ /** \internal Don't use it, but do the equivalent: \code dst.applyOnTheLeft(*this); \endcode */
109
+ template<typename Dest>
110
+ EIGEN_DEVICE_FUNC inline void applyThisOnTheLeft(Dest& dst) const
111
+ {
112
+ // This is the default implementation,
113
+ // derived class can reimplement it in a more optimized way.
114
+ dst = this->derived() * dst;
115
+ }
116
+
117
+ };
118
+
119
+ /***************************************************************************
120
+ * Implementation of matrix base methods
121
+ ***************************************************************************/
122
+
123
+ /** \brief Copies the generic expression \a other into *this.
124
+ *
125
+ * \details The expression must provide a (templated) evalTo(Derived& dst) const
126
+ * function which does the actual job. In practice, this allows any user to write
127
+ * its own special matrix without having to modify MatrixBase
128
+ *
129
+ * \returns a reference to *this.
130
+ */
131
+ template<typename Derived>
132
+ template<typename OtherDerived>
133
+ EIGEN_DEVICE_FUNC
134
+ Derived& DenseBase<Derived>::operator=(const EigenBase<OtherDerived> &other)
135
+ {
136
+ call_assignment(derived(), other.derived());
137
+ return derived();
138
+ }
139
+
140
+ template<typename Derived>
141
+ template<typename OtherDerived>
142
+ EIGEN_DEVICE_FUNC
143
+ Derived& DenseBase<Derived>::operator+=(const EigenBase<OtherDerived> &other)
144
+ {
145
+ call_assignment(derived(), other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>());
146
+ return derived();
147
+ }
148
+
149
+ template<typename Derived>
150
+ template<typename OtherDerived>
151
+ EIGEN_DEVICE_FUNC
152
+ Derived& DenseBase<Derived>::operator-=(const EigenBase<OtherDerived> &other)
153
+ {
154
+ call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
155
+ return derived();
156
+ }
157
+
158
+ } // end namespace Eigen
159
+
160
+ #endif // EIGEN_EIGENBASE_H
@@ -0,0 +1,150 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2009-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
+
10
+ #ifndef EIGEN_FORCEALIGNEDACCESS_H
11
+ #define EIGEN_FORCEALIGNEDACCESS_H
12
+
13
+ namespace Eigen {
14
+
15
+ /** \class ForceAlignedAccess
16
+ * \ingroup Core_Module
17
+ *
18
+ * \brief Enforce aligned packet loads and stores regardless of what is requested
19
+ *
20
+ * \param ExpressionType the type of the object of which we are forcing aligned packet access
21
+ *
22
+ * This class is the return type of MatrixBase::forceAlignedAccess()
23
+ * and most of the time this is the only way it is used.
24
+ *
25
+ * \sa MatrixBase::forceAlignedAccess()
26
+ */
27
+
28
+ namespace internal {
29
+ template<typename ExpressionType>
30
+ struct traits<ForceAlignedAccess<ExpressionType> > : public traits<ExpressionType>
31
+ {};
32
+ }
33
+
34
+ template<typename ExpressionType> class ForceAlignedAccess
35
+ : public internal::dense_xpr_base< ForceAlignedAccess<ExpressionType> >::type
36
+ {
37
+ public:
38
+
39
+ typedef typename internal::dense_xpr_base<ForceAlignedAccess>::type Base;
40
+ EIGEN_DENSE_PUBLIC_INTERFACE(ForceAlignedAccess)
41
+
42
+ EIGEN_DEVICE_FUNC explicit inline ForceAlignedAccess(const ExpressionType& matrix) : m_expression(matrix) {}
43
+
44
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
45
+ inline Index rows() const EIGEN_NOEXCEPT { return m_expression.rows(); }
46
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
47
+ inline Index cols() const EIGEN_NOEXCEPT { return m_expression.cols(); }
48
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
49
+ inline Index outerStride() const EIGEN_NOEXCEPT { return m_expression.outerStride(); }
50
+ EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
51
+ inline Index innerStride() const EIGEN_NOEXCEPT { return m_expression.innerStride(); }
52
+
53
+ EIGEN_DEVICE_FUNC inline const CoeffReturnType coeff(Index row, Index col) const
54
+ {
55
+ return m_expression.coeff(row, col);
56
+ }
57
+
58
+ EIGEN_DEVICE_FUNC inline Scalar& coeffRef(Index row, Index col)
59
+ {
60
+ return m_expression.const_cast_derived().coeffRef(row, col);
61
+ }
62
+
63
+ EIGEN_DEVICE_FUNC inline const CoeffReturnType coeff(Index index) const
64
+ {
65
+ return m_expression.coeff(index);
66
+ }
67
+
68
+ EIGEN_DEVICE_FUNC inline Scalar& coeffRef(Index index)
69
+ {
70
+ return m_expression.const_cast_derived().coeffRef(index);
71
+ }
72
+
73
+ template<int LoadMode>
74
+ inline const PacketScalar packet(Index row, Index col) const
75
+ {
76
+ return m_expression.template packet<Aligned>(row, col);
77
+ }
78
+
79
+ template<int LoadMode>
80
+ inline void writePacket(Index row, Index col, const PacketScalar& x)
81
+ {
82
+ m_expression.const_cast_derived().template writePacket<Aligned>(row, col, x);
83
+ }
84
+
85
+ template<int LoadMode>
86
+ inline const PacketScalar packet(Index index) const
87
+ {
88
+ return m_expression.template packet<Aligned>(index);
89
+ }
90
+
91
+ template<int LoadMode>
92
+ inline void writePacket(Index index, const PacketScalar& x)
93
+ {
94
+ m_expression.const_cast_derived().template writePacket<Aligned>(index, x);
95
+ }
96
+
97
+ EIGEN_DEVICE_FUNC operator const ExpressionType&() const { return m_expression; }
98
+
99
+ protected:
100
+ const ExpressionType& m_expression;
101
+
102
+ private:
103
+ ForceAlignedAccess& operator=(const ForceAlignedAccess&);
104
+ };
105
+
106
+ /** \returns an expression of *this with forced aligned access
107
+ * \sa forceAlignedAccessIf(),class ForceAlignedAccess
108
+ */
109
+ template<typename Derived>
110
+ inline const ForceAlignedAccess<Derived>
111
+ MatrixBase<Derived>::forceAlignedAccess() const
112
+ {
113
+ return ForceAlignedAccess<Derived>(derived());
114
+ }
115
+
116
+ /** \returns an expression of *this with forced aligned access
117
+ * \sa forceAlignedAccessIf(), class ForceAlignedAccess
118
+ */
119
+ template<typename Derived>
120
+ inline ForceAlignedAccess<Derived>
121
+ MatrixBase<Derived>::forceAlignedAccess()
122
+ {
123
+ return ForceAlignedAccess<Derived>(derived());
124
+ }
125
+
126
+ /** \returns an expression of *this with forced aligned access if \a Enable is true.
127
+ * \sa forceAlignedAccess(), class ForceAlignedAccess
128
+ */
129
+ template<typename Derived>
130
+ template<bool Enable>
131
+ inline typename internal::add_const_on_value_type<typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type>::type
132
+ MatrixBase<Derived>::forceAlignedAccessIf() const
133
+ {
134
+ return derived(); // FIXME This should not work but apparently is never used
135
+ }
136
+
137
+ /** \returns an expression of *this with forced aligned access if \a Enable is true.
138
+ * \sa forceAlignedAccess(), class ForceAlignedAccess
139
+ */
140
+ template<typename Derived>
141
+ template<bool Enable>
142
+ inline typename internal::conditional<Enable,ForceAlignedAccess<Derived>,Derived&>::type
143
+ MatrixBase<Derived>::forceAlignedAccessIf()
144
+ {
145
+ return derived(); // FIXME This should not work but apparently is never used
146
+ }
147
+
148
+ } // end namespace Eigen
149
+
150
+ #endif // EIGEN_FORCEALIGNEDACCESS_H