rubyneat 0.3.5.alpha.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (261) hide show
  1. checksums.yaml +7 -0
  2. data/.directory +4 -0
  3. data/.gitignore.orig +20 -0
  4. data/.idea/.name +1 -0
  5. data/.idea/.rakeTasks +7 -0
  6. data/.idea/dictionaries/trader.xml +3 -0
  7. data/.idea/encodings.xml +5 -0
  8. data/.idea/misc.xml +5 -0
  9. data/.idea/modules.xml +9 -0
  10. data/.idea/rubyneat.iml +197 -0
  11. data/.idea/runConfigurations/invpend_neat.xml +26 -0
  12. data/.idea/runConfigurations/sigdebug_neat.xml +24 -0
  13. data/.idea/runConfigurations/xor_neat.xml +26 -0
  14. data/.idea/runConfigurations/xordebug_neat.xml +24 -0
  15. data/.idea/runConfigurations/xorsin_neat.xml +24 -0
  16. data/.idea/scopes/scope_settings.xml +5 -0
  17. data/.idea/vcs.xml +7 -0
  18. data/.idea/workspace.xml +1124 -0
  19. data/.semver +5 -0
  20. data/.yardoc/checksums +11 -0
  21. data/.yardoc/object_types +0 -0
  22. data/.yardoc/objects/root.dat +0 -0
  23. data/.yardoc/proxy_types +0 -0
  24. data/Gemfile +32 -0
  25. data/Gemfile.lock +135 -0
  26. data/Gemfile.lock.orig +147 -0
  27. data/Guardfile +8 -0
  28. data/Rakefile +61 -0
  29. data/bin/neat +83 -0
  30. data/config/application.rb +5 -0
  31. data/doc/ControllerPoint.html +125 -0
  32. data/doc/CuteA.html +286 -0
  33. data/doc/CuteB.html +297 -0
  34. data/doc/DSL.html +883 -0
  35. data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +518 -0
  36. data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +274 -0
  37. data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +366 -0
  38. data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +275 -0
  39. data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +274 -0
  40. data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +274 -0
  41. data/doc/NEAT/BasicNeuronTypes.html +136 -0
  42. data/doc/NEAT/Controller/NeatSettings.html +3985 -0
  43. data/doc/NEAT/Controller.html +2490 -0
  44. data/doc/NEAT/Critter/Genotype/Gene.html +979 -0
  45. data/doc/NEAT/Critter/Genotype.html +1601 -0
  46. data/doc/NEAT/Critter/Phenotype.html +603 -0
  47. data/doc/NEAT/Critter.html +1037 -0
  48. data/doc/NEAT/DSL.html +1255 -0
  49. data/doc/NEAT/Evaluator.html +420 -0
  50. data/doc/NEAT/Evolver/CritterOp.html +551 -0
  51. data/doc/NEAT/Evolver.html +602 -0
  52. data/doc/NEAT/Expressor.html +327 -0
  53. data/doc/NEAT/Graph/DependencyResolver.html +478 -0
  54. data/doc/NEAT/Graph/GraphException.html +123 -0
  55. data/doc/NEAT/Graph.html +402 -0
  56. data/doc/NEAT/NeatException.html +123 -0
  57. data/doc/NEAT/NeatOb.html +567 -0
  58. data/doc/NEAT/Neuron.html +1067 -0
  59. data/doc/NEAT/Operator.html +162 -0
  60. data/doc/NEAT/Population.html +1961 -0
  61. data/doc/NEAT/Trait.html +169 -0
  62. data/doc/NEAT.html +588 -0
  63. data/doc/_index.html +373 -0
  64. data/doc/class_list.html +54 -0
  65. data/doc/css/common.css +1 -0
  66. data/doc/css/full_list.css +57 -0
  67. data/doc/css/style.css +339 -0
  68. data/doc/file_list.html +53 -0
  69. data/doc/frames.html +26 -0
  70. data/doc/index.html +373 -0
  71. data/doc/js/app.js +219 -0
  72. data/doc/js/full_list.js +178 -0
  73. data/doc/js/jquery.js +4 -0
  74. data/doc/method_list.html +1415 -0
  75. data/doc/top-level-namespace.html +164 -0
  76. data/foo/foo_aquarium_example.rb +38 -0
  77. data/foo/foo_gosu.rb +99 -0
  78. data/foo/foo_rubygoo.rb +104 -0
  79. data/foo/foo_sdl.rb +34 -0
  80. data/foo/icon.png +0 -0
  81. data/lib/rubyneat/critter.rb +374 -0
  82. data/lib/rubyneat/default_neat.rb +10 -0
  83. data/lib/rubyneat/dsl.rb +130 -0
  84. data/lib/rubyneat/evaluator.rb +51 -0
  85. data/lib/rubyneat/evolver.rb +315 -0
  86. data/lib/rubyneat/expressor.rb +110 -0
  87. data/lib/rubyneat/graph.rb +95 -0
  88. data/lib/rubyneat/neuron.rb +152 -0
  89. data/lib/rubyneat/population.rb +227 -0
  90. data/lib/rubyneat/rubyneat.rb +429 -0
  91. data/lib/rubyneat.rb +8 -0
  92. data/neater/invpend_neat.rb +150 -0
  93. data/neater/rnlib/inverted_pendulum.rb +380 -0
  94. data/neater/rnlib/xor.rb +10 -0
  95. data/neater/sigdebug_neat.rb +136 -0
  96. data/neater/xor_neat.rb +137 -0
  97. data/neater/xoranalog_neat.rb +138 -0
  98. data/neater/xorsin_neat.rb +143 -0
  99. data/projectFilesBackup/.idea/rubyneat.iml +180 -0
  100. data/public/.directory +4 -0
  101. data/public/background.png +0 -0
  102. data/public/background.xcf +0 -0
  103. data/public/cart.png +0 -0
  104. data/public/cart.xcf +0 -0
  105. data/public/metalpoles_molton_ball_l.jpg +0 -0
  106. data/public/old_background.png +0 -0
  107. data/public/pointer.png +0 -0
  108. data/public/pointer.xcf +0 -0
  109. data/public/pole.kra +0 -0
  110. data/public/pole.png +0 -0
  111. data/public/pole.xcf +0 -0
  112. data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
  113. data/public/wheel.png +0 -0
  114. data/public/wheel.xcf +0 -0
  115. data/public/wood-planks-texture.jpg +0 -0
  116. data/rdoc/ControllerPoint.html +116 -0
  117. data/rdoc/CuteA.html +177 -0
  118. data/rdoc/CuteB.html +178 -0
  119. data/rdoc/DSLSetup.html +177 -0
  120. data/rdoc/GameTestWindow.html +242 -0
  121. data/rdoc/GameWindow.html +292 -0
  122. data/rdoc/Gemfile.html +215 -0
  123. data/rdoc/Gemfile_lock.html +327 -0
  124. data/rdoc/GraphTest.html +210 -0
  125. data/rdoc/Guardfile.html +198 -0
  126. data/rdoc/InvertedPendulum/Cart.html +668 -0
  127. data/rdoc/InvertedPendulum/DSL.html +259 -0
  128. data/rdoc/InvertedPendulum/InvPendWindow.html +402 -0
  129. data/rdoc/InvertedPendulum.html +198 -0
  130. data/rdoc/Logger.html +98 -0
  131. data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +265 -0
  132. data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +162 -0
  133. data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +206 -0
  134. data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +162 -0
  135. data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +162 -0
  136. data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +161 -0
  137. data/rdoc/NEAT/BasicNeuronTypes.html +107 -0
  138. data/rdoc/NEAT/Controller/NeatSettings.html +880 -0
  139. data/rdoc/NEAT/Controller.html +729 -0
  140. data/rdoc/NEAT/Critter/Genotype/Gene.html +457 -0
  141. data/rdoc/NEAT/Critter/Genotype.html +735 -0
  142. data/rdoc/NEAT/Critter/Phenotype.html +330 -0
  143. data/rdoc/NEAT/Critter.html +489 -0
  144. data/rdoc/NEAT/DSL.html +729 -0
  145. data/rdoc/NEAT/Evaluator.html +256 -0
  146. data/rdoc/NEAT/Evolver/CritterOp.html +349 -0
  147. data/rdoc/NEAT/Evolver.html +891 -0
  148. data/rdoc/NEAT/Expressor.html +402 -0
  149. data/rdoc/NEAT/Graph/DependencyResolver.html +291 -0
  150. data/rdoc/NEAT/Graph/GraphException.html +105 -0
  151. data/rdoc/NEAT/Graph.html +263 -0
  152. data/rdoc/NEAT/NeatException.html +105 -0
  153. data/rdoc/NEAT/NeatOb.html +325 -0
  154. data/rdoc/NEAT/Neuron.html +481 -0
  155. data/rdoc/NEAT/Operator.html +109 -0
  156. data/rdoc/NEAT/Population.html +935 -0
  157. data/rdoc/NEAT/Trait.html +117 -0
  158. data/rdoc/NEAT.html +422 -0
  159. data/rdoc/Object.html +384 -0
  160. data/rdoc/Phi.html +98 -0
  161. data/rdoc/Player.html +383 -0
  162. data/rdoc/Rakefile.html +254 -0
  163. data/rdoc/RubyNEAT/Application.html +105 -0
  164. data/rdoc/RubyNEAT.html +98 -0
  165. data/rdoc/SDL/Event2.html +98 -0
  166. data/rdoc/SDL.html +98 -0
  167. data/rdoc/Vector.html +195 -0
  168. data/rdoc/created.rid +125 -0
  169. data/rdoc/doc/ControllerPoint_html.html +299 -0
  170. data/rdoc/doc/CuteA_html.html +438 -0
  171. data/rdoc/doc/CuteB_html.html +436 -0
  172. data/rdoc/doc/DSL_html.html +992 -0
  173. data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +617 -0
  174. data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +413 -0
  175. data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +498 -0
  176. data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +413 -0
  177. data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +413 -0
  178. data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +412 -0
  179. data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +310 -0
  180. data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +3324 -0
  181. data/rdoc/doc/NEAT/Controller_html.html +2212 -0
  182. data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +997 -0
  183. data/rdoc/doc/NEAT/Critter/Genotype_html.html +1556 -0
  184. data/rdoc/doc/NEAT/Critter/Phenotype_html.html +687 -0
  185. data/rdoc/doc/NEAT/Critter_html.html +1037 -0
  186. data/rdoc/doc/NEAT/DSL_html.html +1349 -0
  187. data/rdoc/doc/NEAT/Evaluator_html.html +556 -0
  188. data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +690 -0
  189. data/rdoc/doc/NEAT/Evolver_html.html +677 -0
  190. data/rdoc/doc/NEAT/Expressor_html.html +468 -0
  191. data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +598 -0
  192. data/rdoc/doc/NEAT/Graph/GraphException_html.html +299 -0
  193. data/rdoc/doc/NEAT/Graph_html.html +527 -0
  194. data/rdoc/doc/NEAT/NeatException_html.html +299 -0
  195. data/rdoc/doc/NEAT/NeatOb_html.html +671 -0
  196. data/rdoc/doc/NEAT/Neuron_html.html +1095 -0
  197. data/rdoc/doc/NEAT/Operator_html.html +337 -0
  198. data/rdoc/doc/NEAT/Population_html.html +1795 -0
  199. data/rdoc/doc/NEAT/Trait_html.html +344 -0
  200. data/rdoc/doc/NEAT_html.html +736 -0
  201. data/rdoc/doc/_index_html.html +559 -0
  202. data/rdoc/doc/class_list_html.html +369 -0
  203. data/rdoc/doc/css/common_css.html +188 -0
  204. data/rdoc/doc/css/full_list_css.html +243 -0
  205. data/rdoc/doc/css/style_css.html +530 -0
  206. data/rdoc/doc/file_list_html.html +240 -0
  207. data/rdoc/doc/frames_html.html +217 -0
  208. data/rdoc/doc/index_html.html +559 -0
  209. data/rdoc/doc/js/app_js.html +423 -0
  210. data/rdoc/doc/js/full_list_js.html +372 -0
  211. data/rdoc/doc/js/jquery_js.html +1536 -0
  212. data/rdoc/doc/method_list_html.html +1375 -0
  213. data/rdoc/doc/top-level-namespace_html.html +317 -0
  214. data/rdoc/fonts/Lato-Light.ttf +0 -0
  215. data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
  216. data/rdoc/fonts/Lato-Regular.ttf +0 -0
  217. data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
  218. data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
  219. data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
  220. data/rdoc/fonts.css +167 -0
  221. data/rdoc/images/add.png +0 -0
  222. data/rdoc/images/arrow_up.png +0 -0
  223. data/rdoc/images/brick.png +0 -0
  224. data/rdoc/images/brick_link.png +0 -0
  225. data/rdoc/images/bug.png +0 -0
  226. data/rdoc/images/bullet_black.png +0 -0
  227. data/rdoc/images/bullet_toggle_minus.png +0 -0
  228. data/rdoc/images/bullet_toggle_plus.png +0 -0
  229. data/rdoc/images/date.png +0 -0
  230. data/rdoc/images/delete.png +0 -0
  231. data/rdoc/images/find.png +0 -0
  232. data/rdoc/images/loadingAnimation.gif +0 -0
  233. data/rdoc/images/macFFBgHack.png +0 -0
  234. data/rdoc/images/package.png +0 -0
  235. data/rdoc/images/page_green.png +0 -0
  236. data/rdoc/images/page_white_text.png +0 -0
  237. data/rdoc/images/page_white_width.png +0 -0
  238. data/rdoc/images/plugin.png +0 -0
  239. data/rdoc/images/ruby.png +0 -0
  240. data/rdoc/images/tag_blue.png +0 -0
  241. data/rdoc/images/tag_green.png +0 -0
  242. data/rdoc/images/transparent.png +0 -0
  243. data/rdoc/images/wrench.png +0 -0
  244. data/rdoc/images/wrench_orange.png +0 -0
  245. data/rdoc/images/zoom.png +0 -0
  246. data/rdoc/index.html +282 -0
  247. data/rdoc/js/darkfish.js +140 -0
  248. data/rdoc/js/jquery.js +18 -0
  249. data/rdoc/js/navigation.js +142 -0
  250. data/rdoc/js/search.js +109 -0
  251. data/rdoc/js/search_index.js +1 -0
  252. data/rdoc/js/searcher.js +228 -0
  253. data/rdoc/rdoc.css +580 -0
  254. data/rdoc/rubyneat_gemspec.html +387 -0
  255. data/rdoc/table_of_contents.html +2502 -0
  256. data/rdoc/xordebug_log.html +170598 -0
  257. data/rdoc/xorsin_log.html +22569 -0
  258. data/rubyneat.gemspec +347 -0
  259. data/rubyneat.gemspec.orig +375 -0
  260. data/spec/lib/rubyneat/rubyneat_spec.rb +132 -0
  261. metadata +555 -0
@@ -0,0 +1,677 @@
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+ <!DOCTYPE html>
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+
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+ <html>
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+ <head>
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+ <meta charset="UTF-8">
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+
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+ <title>Evolver.html - rubyneat 0.3.4</title>
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+
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+ <link href="../../fonts.css" rel="stylesheet">
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+ <link href="../../rdoc.css" rel="stylesheet">
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+
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+ <script type="text/javascript">
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+ var rdoc_rel_prefix = "../../";
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+ </script>
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+ <script src="../../js/jquery.js"></script>
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+ <script src="../../js/navigation.js"></script>
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+ <script src="../../js/search_index.js"></script>
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+ <script src="../../js/search.js"></script>
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+ <script src="../../js/searcher.js"></script>
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+ <script src="../../js/darkfish.js"></script>
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+ <body id="top" role="document" class="file">
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+ <nav role="navigation">
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+ <div id="project-navigation">
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+ <div id="home-section" role="region" title="Quick navigation" class="nav-section">
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+ <h2>
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+ <a href="../../index.html" rel="home">Home</a>
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+ </h2>
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+ <div id="table-of-contents-navigation">
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+ <a href="../../table_of_contents.html#pages">Pages</a>
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+ <a href="../../table_of_contents.html#classes">Classes</a>
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+ <a href="../../table_of_contents.html#methods">Methods</a>
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+ </div>
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+ </div>
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+ <div id="search-section" role="search" class="project-section initially-hidden">
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+ <form action="#" method="get" accept-charset="utf-8">
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+ <div id="search-field-wrapper">
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+ <input id="search-field" role="combobox" aria-label="Search"
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+ aria-autocomplete="list" aria-controls="search-results"
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+ type="text" name="search" placeholder="Search" spellcheck="false"
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+ title="Type to search, Up and Down to navigate, Enter to load">
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+ </div>
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+ <ul id="search-results" aria-label="Search Results"
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+ aria-busy="false" aria-expanded="false"
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+ aria-atomic="false" class="initially-hidden"></ul>
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+ </form>
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+ </div>
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+ <div id="project-metadata">
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+ <div id="fileindex-section" class="nav-section">
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+ <h3>Pages</h3>
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+ <ul class="link-list">
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+ <li><a href="../../Gemfile.html">Gemfile</a>
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+ <li><a href="../../Gemfile_lock.html">Gemfile.lock</a>
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+ <li><a href="../../Guardfile.html">Guardfile</a>
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+ <li><a href="../../Rakefile.html">Rakefile</a>
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+ <li><a href="../../doc/ControllerPoint_html.html">ControllerPoint.html</a>
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+ <li><a href="../../doc/CuteA_html.html">CuteA.html</a>
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+ <li><a href="../../doc/CuteB_html.html">CuteB.html</a>
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+ <li><a href="../../doc/DSL_html.html">DSL.html</a>
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+ <li><a href="../../doc/NEAT_html.html">NEAT.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes_html.html">BasicNeuronTypes.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html">BiasNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html">CosineNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/InputNeuron_html.html">InputNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/SineNeuron_html.html">SineNeuron.html</a>
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+ <li><a href="../../doc/NEAT/Graph_html.html">Graph.html</a>
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+ <li><a href="../../doc/NEAT/Graph/DependencyResolver_html.html">DependencyResolver.html</a>
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+ <li><a href="../../doc/NEAT/Graph/GraphException_html.html">GraphException.html</a>
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+ <li><a href="../../doc/NEAT/NeatException_html.html">NeatException.html</a>
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+ <li><a href="../../doc/NEAT/NeatOb_html.html">NeatOb.html</a>
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+ <li><a href="../../doc/class_list_html.html">class_list.html</a>
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+ <li><a href="../../doc/css/common_css.html">common.css</a>
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+ <li><a href="../../doc/css/full_list_css.html">full_list.css</a>
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+ <li><a href="../../doc/css/style_css.html">style.css</a>
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+ Method List
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+ href=&quot;../file_list.html&quot;&gt;
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+ &lt;/div&gt;
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+
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+ &lt;iframe id=&quot;search_frame&quot;&gt;&lt;/iframe&gt;
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+
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+ &lt;div id=&quot;content&quot;&gt;&lt;h1&gt;Class: NEAT::Evolver</pre>
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+
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+ <p>&lt;/h1&gt;</p>
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+
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+ <p>&lt;dl class=“box”&gt;</p>
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+
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+ <pre>&lt;dt class=&quot;r1&quot;&gt;Inherits:&lt;/dt&gt;
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+ &lt;dd class=&quot;r1&quot;&gt;
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+ &lt;span class=&quot;inheritName&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;Operator.html&quot; title=&quot;NEAT::Operator (class)&quot;&gt;Operator&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
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+
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+ &lt;ul class=&quot;fullTree&quot;&gt;
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+ &lt;li&gt;Object&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;Operator.html&quot; title=&quot;NEAT::Operator (class)&quot;&gt;Operator&lt;/a&gt;&lt;/span&gt;&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;NEAT::Evolver&lt;/li&gt;
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+
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+ &lt;/ul&gt;
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+ &lt;a href=&quot;#&quot; class=&quot;inheritanceTree&quot;&gt;show all&lt;/a&gt;
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+
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+ &lt;/dd&gt;
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+
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+ &lt;dt class=&quot;r2 last&quot;&gt;Defined in:&lt;/dt&gt;
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+ &lt;dd class=&quot;r2 last&quot;&gt;lib/rubyneat/evolver.rb&lt;/dd&gt;</pre>
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+
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+ <p>&lt;/dl&gt; &lt;div class=“clear”&gt;&lt;/div&gt;</p>
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+
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+ <p>&lt;h2&gt;Overview&lt;/h2&gt;&lt;div class=“docstring”&gt;</p>
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+
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+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
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+
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+ <p>&lt;h1 id=“label-Evolver+–+Basis+of+all+evolvers.”&gt;Evolver – Basis of
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+ all evolvers.&lt;/h1&gt;</p>
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+
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+ <p>&lt;p&gt;All evolvers shall derive from this basic evolver (or this one can
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+ be used as is). Here, we&amp;#39;ll have many different evolutionary
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+ operators that will perform operations on the various critters in the
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+ population.&lt;/p&gt;</p>
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+
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+ <pre>&lt;/div&gt;</pre>
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+
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+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
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+ <p>&lt;/div&gt;&lt;h2&gt;Defined Under Namespace&lt;/h2&gt; &lt;p
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+ class=“children”&gt;</p>
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+
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+ <pre>&lt;strong class=&quot;classes&quot;&gt;Classes:&lt;/strong&gt; &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;Evolver/CritterOp.html&quot; title=&quot;NEAT::Evolver::CritterOp (class)&quot;&gt;CritterOp&lt;/a&gt;&lt;/span&gt;</pre>
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+
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+ <p>&lt;/p&gt;</p>
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+
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+ <pre>&lt;h2&gt;Instance Attribute Summary &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;&lt;/h2&gt;
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+ &lt;ul class=&quot;summary&quot;&gt;
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+
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+ &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
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+ &lt;a href=&quot;#npop-instance_method&quot; title=&quot;#npop (instance method)&quot;&gt;- (Object) &lt;strong&gt;npop&lt;/strong&gt; &lt;/a&gt;
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+
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+ &lt;/span&gt;
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+
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+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
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+
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+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
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+
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+ <p>&lt;p&gt;Returns the value of attribute npop.&lt;/p&gt;
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+ &lt;/div&gt;&lt;/span&gt;</p>
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+
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+ <p>&lt;/li&gt;</p>
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+
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+ <pre>&lt;/ul&gt;
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+
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+ &lt;h3 class=&quot;inherited&quot;&gt;Attributes inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
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+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#controller-instance_method&quot; title=&quot;NEAT::NeatOb#controller (method)&quot;&gt;#controller&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#name-instance_method&quot; title=&quot;NEAT::NeatOb#name (method)&quot;&gt;#name&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
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+
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+ &lt;h2&gt;
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+ Instance Method Summary
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+ &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;
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+ &lt;/h2&gt;
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+
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+ &lt;ul class=&quot;summary&quot;&gt;
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+
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+ &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
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+ &lt;a href=&quot;#evolve-instance_method&quot; title=&quot;#evolve (instance method)&quot;&gt;- (Object) &lt;strong&gt;evolve&lt;/strong&gt;(population) &lt;/a&gt;
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+
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+ &lt;/span&gt;
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+
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+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
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+
343
+ <p>&lt;p&gt;Here we clone the population and then evolve it on the basis of
344
+ fitness and novelty, etc.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
345
+
346
+ <p>&lt;/li&gt;</p>
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+
348
+ <pre> &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
350
+
351
+ &lt;a href=&quot;#gen_initial_genes%21-instance_method&quot; title=&quot;#gen_initial_genes! (instance method)&quot;&gt;- (Object) &lt;strong&gt;gen_initial_genes!&lt;/strong&gt;(genotype) &lt;/a&gt;
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+
353
+ &lt;/span&gt;
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+
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+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
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+
357
+ <p>&lt;p&gt;Generate the initial genes for a given genotype.&lt;/p&gt;
358
+ &lt;/div&gt;&lt;/span&gt;</p>
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+
360
+ <p>&lt;/li&gt;</p>
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+
362
+ <pre> &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
365
+ &lt;a href=&quot;#initialize-instance_method&quot; title=&quot;#initialize (instance method)&quot;&gt;- (Evolver) &lt;strong&gt;initialize&lt;/strong&gt;(c) &lt;/a&gt;
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+
367
+ &lt;/span&gt;
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+
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+ &lt;span class=&quot;note title constructor&quot;&gt;constructor&lt;/span&gt;
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+
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+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
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+
373
+ <p>&lt;p&gt;A new instance of Evolver.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
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+
375
+ <p>&lt;/li&gt;</p>
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+
377
+ <pre> &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
380
+ &lt;a href=&quot;#mutate%21-instance_method&quot; title=&quot;#mutate! (instance method)&quot;&gt;- (Object) &lt;strong&gt;mutate!&lt;/strong&gt;(population) &lt;/a&gt;
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+
382
+ &lt;/span&gt;
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+
384
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
385
+
386
+ <p>&lt;p&gt;Here we mutate the population.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
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+
388
+ <p>&lt;/li&gt;</p>
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+
390
+ <pre> &lt;/ul&gt;
391
+
392
+ &lt;h3 class=&quot;inherited&quot;&gt;Methods inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
393
+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#log-instance_method&quot; title=&quot;NEAT::NeatOb#log (method)&quot;&gt;#log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#log-class_method&quot; title=&quot;NEAT::NeatOb.log (method)&quot;&gt;log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#to_s-instance_method&quot; title=&quot;NEAT::NeatOb#to_s (method)&quot;&gt;#to_s&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
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+
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+ &lt;div id=&quot;constructor_details&quot; class=&quot;method_details_list&quot;&gt;
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+ &lt;h2&gt;Constructor Details&lt;/h2&gt;
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+
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+ &lt;div class=&quot;method_details first&quot;&gt;
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+ &lt;h3 class=&quot;signature first&quot; id=&quot;initialize-instance_method&quot;&gt;
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+
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+ - (&lt;tt&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;&quot; title=&quot;NEAT::Evolver (class)&quot;&gt;Evolver&lt;/a&gt;&lt;/span&gt;&lt;/tt&gt;) &lt;strong&gt;initialize&lt;/strong&gt;(c)</pre>
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+
403
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
404
+
405
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
406
+
407
+ <p>&lt;p&gt;Returns a new instance of Evolver&lt;/p&gt;</p>
408
+
409
+ <pre>&lt;/div&gt;</pre>
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+
411
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
413
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
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+
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+ <pre>&lt;tr&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;lines&quot;&gt;</pre>
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+
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+ <p>13 14 15 16&lt;/pre&gt;</p>
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+
421
+ <pre>&lt;/td&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 13&lt;/span&gt;</pre>
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+
425
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
426
+ identifier rubyid_initialize&#39;&gt;initialize&lt;/span&gt;&lt;span
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+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
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+ rubyid_c&#39;&gt;c&lt;/span&gt;&lt;span
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+ class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
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+
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+ <pre>&lt;span class=&#39;kw&#39;&gt;super&lt;/span&gt;
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+ &lt;span class=&#39;ivar&#39;&gt;@critter_op&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;CritterOp&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;</pre>
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+
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+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
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+
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+ <pre> &lt;/td&gt;
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+ &lt;/tr&gt;</pre>
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+
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+ <p>&lt;/table&gt; &lt;/div&gt;</p>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre>&lt;div id=&quot;instance_attr_details&quot; class=&quot;attr_details&quot;&gt;
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+ &lt;h2&gt;Instance Attribute Details&lt;/h2&gt;
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+
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+ &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
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+ &lt;div class=&quot;method_details first&quot;&gt;
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+ &lt;h3 class=&quot;signature first&quot; id=&quot;npop-instance_method&quot;&gt;
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+
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+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;npop&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
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+
452
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
453
+
454
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
455
+
456
+ <p>&lt;p&gt;Returns the value of attribute npop&lt;/p&gt;</p>
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+
458
+ <pre>&lt;/div&gt;</pre>
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+
460
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
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+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
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+
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+ <pre>&lt;tr&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;lines&quot;&gt;</pre>
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+
468
+ <p>11 12 13&lt;/pre&gt;</p>
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+
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+ <pre>&lt;/td&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 11&lt;/span&gt;</pre>
473
+
474
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
475
+ identifier rubyid_npop&#39;&gt;npop&lt;/span&gt;</p>
476
+
477
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@npop&lt;/span&gt;</pre>
478
+
479
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
480
+
481
+ <pre> &lt;/td&gt;
482
+ &lt;/tr&gt;</pre>
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+
484
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
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+
486
+ <pre>&lt;/div&gt;
487
+
488
+ &lt;div id=&quot;instance_method_details&quot; class=&quot;method_details_list&quot;&gt;
489
+ &lt;h2&gt;Instance Method Details&lt;/h2&gt;
490
+
491
+ &lt;div class=&quot;method_details first&quot;&gt;
492
+ &lt;h3 class=&quot;signature first&quot; id=&quot;evolve-instance_method&quot;&gt;
493
+
494
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evolve&lt;/strong&gt;(population)</pre>
495
+
496
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
497
+
498
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
499
+
500
+ <p>&lt;p&gt;Here we clone the population and then evolve it on the basis of
501
+ fitness and novelty, etc.&lt;/p&gt;</p>
502
+
503
+ <p>&lt;p&gt;Returns the newly-evolved population.&lt;/p&gt;</p>
504
+
505
+ <pre>&lt;/div&gt;</pre>
506
+
507
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
509
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
510
+
511
+ <pre>&lt;tr&gt;
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+ &lt;td&gt;
513
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
514
+
515
+ <p>53 54 55 56 57 58 59 60 61 62 63 64&lt;/pre&gt;</p>
516
+
517
+ <pre>&lt;/td&gt;
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+ &lt;td&gt;
519
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 53&lt;/span&gt;</pre>
520
+
521
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
522
+ identifier rubyid_evolve&#39;&gt;evolve&lt;/span&gt;&lt;span
523
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
524
+ rubyid_population&#39;&gt;population&lt;/span&gt;&lt;span
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+ class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
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+
527
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@npop&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_population&#39;&gt;population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_dclone&#39;&gt;dclone&lt;/span&gt;
528
+
529
+ &lt;span class=&#39;comment&#39;&gt;# Population sorting and evaluation for breeding, mutations, etc.</pre>
530
+
531
+ <p>&lt;/span&gt; &lt;span class=&#39;id identifier
532
+ rubyid_prepare_speciation!&#39;&gt;prepare_speciation!&lt;/span&gt;</p>
533
+
534
+ <pre>&lt;span class=&#39;id identifier rubyid_prepare_fitness!&#39;&gt;prepare_fitness!&lt;/span&gt;
535
+ &lt;span class=&#39;id identifier rubyid_prepare_novelty!&#39;&gt;prepare_novelty!&lt;/span&gt;
536
+
537
+ &lt;span class=&#39;id identifier rubyid_mate!&#39;&gt;mate!&lt;/span&gt;
538
+
539
+ &lt;span class=&#39;kw&#39;&gt;return&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@npop&lt;/span&gt;</pre>
540
+
541
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
542
+
543
+ <pre> &lt;/td&gt;
544
+ &lt;/tr&gt;</pre>
545
+
546
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
547
+
548
+ <pre> &lt;div class=&quot;method_details &quot;&gt;
549
+ &lt;h3 class=&quot;signature &quot; id=&quot;gen_initial_genes!-instance_method&quot;&gt;
550
+
551
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;gen_initial_genes!&lt;/strong&gt;(genotype)</pre>
552
+
553
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
554
+
555
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
556
+
557
+ <p>&lt;p&gt;Generate the initial genes for a given genotype. We key genes off
558
+ their innovation numbers.&lt;/p&gt;</p>
559
+
560
+ <pre>&lt;/div&gt;</pre>
561
+
562
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
563
+
564
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
565
+
566
+ <pre>&lt;tr&gt;
567
+ &lt;td&gt;
568
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
569
+
570
+ <p>20 21 22 23 24 25 26 27 28&lt;/pre&gt;</p>
571
+
572
+ <pre>&lt;/td&gt;
573
+ &lt;td&gt;
574
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 20&lt;/span&gt;</pre>
575
+
576
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
577
+ identifier
578
+ rubyid_gen_initial_genes!&#39;&gt;gen_initial_genes!&lt;/span&gt;&lt;span
579
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
580
+ rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span
581
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
582
+
583
+ <pre>&lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_genes&#39;&gt;genes&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;lbrace&#39;&gt;{&lt;/span&gt;&lt;span class=&#39;rbrace&#39;&gt;}&lt;/span&gt;
584
+ &lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_neural_inputs&#39;&gt;neural_inputs&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_s1&#39;&gt;s1&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_input&#39;&gt;input&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
585
+ &lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_neural_outputs&#39;&gt;neural_outputs&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_s2&#39;&gt;s2&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_output&#39;&gt;output&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
586
+ &lt;span class=&#39;id identifier rubyid_g&#39;&gt;g&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Critter&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Genotype&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Gene&lt;/span&gt;&lt;span class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_input&#39;&gt;input&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_output&#39;&gt;output&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_controller&#39;&gt;controller&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_gaussian&#39;&gt;gaussian&lt;/span&gt;&lt;span class=&#39;rbracket&#39;&gt;]&lt;/span&gt;
587
+ &lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_genes&#39;&gt;genes&lt;/span&gt;&lt;span class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_g&#39;&gt;g&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_innovation&#39;&gt;innovation&lt;/span&gt;&lt;span class=&#39;rbracket&#39;&gt;]&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_g&#39;&gt;g&lt;/span&gt;
588
+ &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
589
+ &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;</pre>
590
+
591
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
592
+
593
+ <pre> &lt;/td&gt;
594
+ &lt;/tr&gt;</pre>
595
+
596
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
597
+
598
+ <pre> &lt;div class=&quot;method_details &quot;&gt;
599
+ &lt;h3 class=&quot;signature &quot; id=&quot;mutate!-instance_method&quot;&gt;
600
+
601
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;mutate!&lt;/strong&gt;(population)</pre>
602
+
603
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
604
+
605
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
606
+
607
+ <p>&lt;p&gt;Here we mutate the population.&lt;/p&gt;</p>
608
+
609
+ <pre>&lt;/div&gt;</pre>
610
+
611
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
612
+
613
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
614
+
615
+ <pre>&lt;tr&gt;
616
+ &lt;td&gt;
617
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
618
+
619
+ <p>31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47&lt;/pre&gt;</p>
620
+
621
+ <pre>&lt;/td&gt;
622
+ &lt;td&gt;
623
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 31&lt;/span&gt;</pre>
624
+
625
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
626
+ identifier rubyid_mutate!&#39;&gt;mutate!&lt;/span&gt;&lt;span
627
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
628
+ rubyid_population&#39;&gt;population&lt;/span&gt;&lt;span
629
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
630
+
631
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@npop&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_population&#39;&gt;population&lt;/span&gt;
632
+
633
+ &lt;span class=&#39;kw&#39;&gt;if&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@controller&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_parms&#39;&gt;parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_mate_only_prob&#39;&gt;mate_only_prob&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_nil?&#39;&gt;nil?&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;or&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_rand&#39;&gt;rand&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;gt;&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@controller&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_parms&#39;&gt;parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_mate_only_prob&#39;&gt;mate_only_prob&lt;/span&gt;
634
+ &lt;span class=&#39;id identifier rubyid_log&#39;&gt;log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;tstring&#39;&gt;&lt;span class=&#39;tstring_beg&#39;&gt;&amp;quot;&lt;/span&gt;&lt;span class=&#39;tstring_content&#39;&gt;[[[ Neuron and Gene Giggling!&lt;/span&gt;&lt;span class=&#39;tstring_end&#39;&gt;&amp;quot;&lt;/span&gt;&lt;/span&gt;
635
+ &lt;span class=&#39;id identifier rubyid_mutate_perturb_gene_weights!&#39;&gt;mutate_perturb_gene_weights!&lt;/span&gt;
636
+ &lt;span class=&#39;id identifier rubyid_mutate_change_gene_weights!&#39;&gt;mutate_change_gene_weights!&lt;/span&gt;
637
+ &lt;span class=&#39;id identifier rubyid_mutate_add_neurons!&#39;&gt;mutate_add_neurons!&lt;/span&gt;
638
+ &lt;span class=&#39;id identifier rubyid_mutate_change_neurons!&#39;&gt;mutate_change_neurons!&lt;/span&gt;
639
+ &lt;span class=&#39;id identifier rubyid_mutate_add_genes!&#39;&gt;mutate_add_genes!&lt;/span&gt;
640
+ &lt;span class=&#39;id identifier rubyid_mutate_disable_genes!&#39;&gt;mutate_disable_genes!&lt;/span&gt;
641
+ &lt;span class=&#39;id identifier rubyid_mutate_reenable_genes!&#39;&gt;mutate_reenable_genes!&lt;/span&gt;
642
+ &lt;span class=&#39;id identifier rubyid_log&#39;&gt;log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;tstring&#39;&gt;&lt;span class=&#39;tstring_beg&#39;&gt;&amp;quot;&lt;/span&gt;&lt;span class=&#39;tstring_content&#39;&gt;]]] End Neuron and Gene Giggling!\n&lt;/span&gt;&lt;span class=&#39;tstring_end&#39;&gt;&amp;quot;&lt;/span&gt;&lt;/span&gt;
643
+ &lt;span class=&#39;kw&#39;&gt;else&lt;/span&gt;
644
+ &lt;span class=&#39;id identifier rubyid_log&#39;&gt;log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;tstring&#39;&gt;&lt;span class=&#39;tstring_beg&#39;&gt;&amp;quot;&lt;/span&gt;&lt;span class=&#39;tstring_content&#39;&gt;*** Mating only!&lt;/span&gt;&lt;span class=&#39;tstring_end&#39;&gt;&amp;quot;&lt;/span&gt;&lt;/span&gt;
645
+ &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;</pre>
646
+
647
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
648
+
649
+ <pre> &lt;/td&gt;
650
+ &lt;/tr&gt;</pre>
651
+
652
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
653
+
654
+ <pre>&lt;/div&gt;</pre>
655
+
656
+ <p>&lt;/div&gt;</p>
657
+
658
+ <pre> &lt;div id=&quot;footer&quot;&gt;
659
+ Generated on Sun Mar 16 16:36:51 2014 by
660
+ &lt;a href=&quot;http://yardoc.org&quot; title=&quot;Yay! A Ruby Documentation Tool&quot; target=&quot;_parent&quot;&gt;yard&lt;/a&gt;
661
+ 0.8.7.3 (ruby-2.1.1).</pre>
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+
663
+ <p>&lt;/div&gt;</p>
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+
665
+ <pre>&lt;/body&gt;</pre>
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+
667
+ <p>&lt;/html&gt;</p>
668
+ </main>
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+
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+
671
+
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+ <footer id="validator-badges" role="contentinfo">
673
+ <p><a href="http://validator.w3.org/check/referer">Validate</a>
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+ <p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
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+ <p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
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+ </footer>
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+