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<p><p>Helper function to Condition boolean vectors to be +1 if true, -1
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<p><p>Calculation to add the cost to the fitness, resulting in a fitness
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<p><p>DSL – Run evolution.</p> </div></span></p>
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<a href="#fitness-instance_method" title="#fitness (instance method)">- (Object) <strong>fitness</strong>(&amp;block) </a>
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<p><p>fitness function calls the block with 2 vectors or two hashes,
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well as a sequence number that can be used to index what the actual output
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<p><p>This is used to handle the details of our DSL.</p>
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<p><p>Query function is called with the sequence (time evolution)
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number, and returns an array or hash of parameters that will be given to
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the input nodes.</p> </div></span></p>
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<p><p>Report on evaluations.</p> </div></span></p>
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<p><p>Run the engine.</p> </div></span></p>
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|
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<p><p>Helper function to do a simple fitness calculation on the basis of
|
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the sum of the square of the diffences of the element in the two
|
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vectors.</p> </div></span></p>
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<p></li></p>
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<pre> <li class="public ">
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<span class="summary_signature">
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<a href="#stop_on_fitness-instance_method" title="#stop_on_fitness (instance method)">- (Object) <strong>stop_on_fitness</strong>(&amp;block) </a>
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<span class="summary_desc"><div class='inline'></pre>
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<p><p>Stop the progression once the fitness criteria is reached for the
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most fit critter.</p> </div></span></p>
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<p></li></p>
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<pre> <li class="public ">
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<span class="summary_signature">
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<a href="#uncondition_boolean_vector-instance_method" title="#uncondition_boolean_vector (instance method)">- (Object) <strong>uncondition_boolean_vector</strong>(vec, sig = :tanh) </a>
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</span>
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<span class="summary_desc"><div class='inline'></pre>
|
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<p><p>Helper function to Uncondition boolean vectors to be +1 if true,
|
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-1 if false FIXME we need a better discrimination function.</p>
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</div></span></p>
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<p></li></p>
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<pre> </ul>
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<h3 class="inherited">Methods included from <span class='object_link'><a href="../NEAT.html" title="NEAT (module)">NEAT</a></span></h3>
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<p class="inherited"><span class='object_link'><a href="../NEAT.html#controller-class_method" title="NEAT.controller (method)">controller</a></span>, <span class='object_link'><a href="../NEAT.html#controller%3D-class_method" title="NEAT.controller= (method)">controller=</a></span>, <span class='object_link'><a href="../NEAT.html#create_controller-class_method" title="NEAT.create_controller (method)">create_controller</a></span>, <span class='object_link'><a href="../NEAT.html#dpp-class_method" title="NEAT.dpp (method)">dpp</a></span>, <span class='object_link'><a href="../NEAT.html#gaussian-class_method" title="NEAT.gaussian (method)">gaussian</a></span>, <span class='object_link'><a href="../NEAT.html#new_innovation-class_method" title="NEAT.new_innovation (method)">new_innovation</a></span>, <span class='object_link'><a href="../NEAT.html#random_name_generator-class_method" title="NEAT.random_name_generator (method)">random_name_generator</a></span></p></pre>
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<p><div id=“method_missing_details” class=“method_details_list”></p>
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<pre class="ruby"><span class="ruby-operator"><</span><span class="ruby-identifier">h2</span><span class="ruby-operator">></span><span class="ruby-constant">Dynamic</span> <span class="ruby-constant">Method</span> <span class="ruby-constant">Handling</span><span class="ruby-operator"><</span><span class="ruby-regexp">/h2>
|
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<p class="notice this">
|
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This class handles dynamic methods through the <tt>method_missing</</span><span class="ruby-identifier">tt</span><span class="ruby-operator">></span> <span class="ruby-identifier">method</span>
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|
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<span class="ruby-operator"><</span><span class="ruby-regexp">/p>
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<div class="method_details first">
|
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<h3 class="signature first" id="method_missing-instance_method">
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- (<tt>Object</</span><span class="ruby-identifier">tt</span><span class="ruby-operator">></span>) <span class="ruby-operator"><</span><span class="ruby-identifier">strong</span><span class="ruby-operator">></span><span class="ruby-identifier">method_missing</span><span class="ruby-operator"><</span><span class="ruby-regexp">/strong>(m, *args, &amp;block)
|
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</span></pre>
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<p></h3><div class=“docstring”></p>
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|
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<pre><div class="discussion"></pre>
|
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<p><p>This is used to handle the details of our DSL.</p></p>
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<pre></div></pre>
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<p></div> <div class=“tags”></p>
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<p></div><table class=“source_code”></p>
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<pre><tr>
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<pre class="lines"></pre>
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<p>114 115 116 117 118 119 120 121 122 123 124</pre></p>
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<pre></td>
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<td>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 114</span></pre>
|
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|
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<p><span class='kw'>def</span> <span class='id
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identifier
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rubyid_method_missing'>method_missing</span><span
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class='lparen'>(</span><span class='id identifier
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rubyid_m'>m</span><span
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class='comma'>,</span> <span
|
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class='op'>*</span><span class='id identifier
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rubyid_args'>args</span><span
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class='comma'>,</span> <span
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class='op'>&amp;</span><span class='id
|
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identifier rubyid_block'>block</span><span
|
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|
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class='rparen'>)</span></p>
|
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|
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<pre><span class='comment'># we want to catch parameters settings here.</pre>
|
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|
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|
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|
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<p></span> <span class='kw'>if</span> <span
|
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|
+
class='const'>NEAT</span><span
|
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|
+
class='op'>::</span><span class='id identifier
|
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|
+
rubyid_controller'>controller</span><span
|
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|
+
class='period'>.</span><span class='id identifier
|
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|
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rubyid_parms'>parms</span><span
|
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|
+
class='period'>.</span><span class='id identifier
|
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rubyid_respond_to?'>respond_to?</span> <span
|
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|
+
class='lparen'>(</span><span class='id identifier
|
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|
+
rubyid_assignment'>assignment</span> <span
|
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|
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class='op'>=</span> <span
|
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|
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class='lparen'>(</span><span class='id identifier
|
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|
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rubyid_m'>m</span><span
|
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|
+
class='period'>.</span><span class='id identifier
|
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|
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rubyid_to_s'>to_s</span> <span
|
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|
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class='op'>+</span> <span
|
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class='tstring'><span
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|
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class='tstring_beg'>&#39;</span><span
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class='tstring_content'>=</span><span
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class='tstring_end'>&#39;</span></span><span
|
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|
+
class='rparen'>)</span><span
|
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|
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class='period'>.</span><span class='id identifier
|
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|
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rubyid_to_sym'>to_sym</span><span
|
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|
+
class='rparen'>)</span></p>
|
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+
|
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|
+
<pre> <span class='id identifier rubyid_raise'>raise</span> <span class='const'>NeatException</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Missing value(s) to %s</span><span class='tstring_end'>&quot;</span></span> <span class='op'>%</span> <span class='id identifier rubyid_m'>m</span><span class='rparen'>)</span> <span class='kw'>if</span> <span class='id identifier rubyid_args'>args</span><span class='period'>.</span><span class='id identifier rubyid_empty?'>empty?</span>
|
|
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|
+
<span class='id identifier rubyid_val'>val</span> <span class='op'>=</span> <span class='lparen'>(</span><span class='id identifier rubyid_args'>args</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span> <span class='op'>==</span> <span class='int'>1</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='id identifier rubyid_args'>args</span><span class='lbracket'>[</span><span class='int'>0</span><span class='rbracket'>]</span> <span class='op'>:</span> <span class='id identifier rubyid_args'>args</span>
|
|
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|
+
<span class='gvar'>$log</span><span class='period'>.</span><span class='id identifier rubyid_debug'>debug</span> <span class='lbrace'>{</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Caught method %s with parameter of %s</span><span class='tstring_end'>&quot;</span></span> <span class='op'>%</span> <span class='lbracket'>[</span><span class='id identifier rubyid_assignment'>assignment</span><span class='comma'>,</span> <span class='id identifier rubyid_val'>val</span><span class='rbracket'>]</span> <span class='rbrace'>}</span>
|
|
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|
+
<span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_parms'>parms</span><span class='period'>.</span><span class='id identifier rubyid_send'>send</span><span class='lparen'>(</span><span class='id identifier rubyid_assignment'>assignment</span><span class='comma'>,</span> <span class='id identifier rubyid_val'>val</span><span class='rparen'>)</span>
|
|
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|
+
<span class='kw'>else</span>
|
|
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|
+
<span class='kw'>super</span>
|
|
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|
+
<span class='kw'>end</span></pre>
|
|
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|
+
|
|
566
|
+
<p><span class='kw'>end</span></pre></p>
|
|
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|
+
|
|
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|
+
<pre> </td>
|
|
569
|
+
</tr></pre>
|
|
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|
+
|
|
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|
+
<p></table> </div></p>
|
|
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|
+
|
|
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|
+
<p></div></p>
|
|
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|
+
|
|
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|
+
<pre><div id="instance_method_details" class="method_details_list">
|
|
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|
+
<h2>Instance Method Details</h2>
|
|
577
|
+
|
|
578
|
+
<div class="method_details first">
|
|
579
|
+
<h3 class="signature first" id="compare-instance_method">
|
|
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|
+
|
|
581
|
+
- (<tt>Object</tt>) <strong>compare</strong>(&amp;block)</pre>
|
|
582
|
+
|
|
583
|
+
<p></h3><div class=“docstring”></p>
|
|
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|
+
|
|
585
|
+
<pre><div class="discussion"></pre>
|
|
586
|
+
|
|
587
|
+
<p><p>Fitness ordering – given 2 fitness numbers, use the
|
|
588
|
+
&lt;=&gt; to compare them (or the equivalent, following the +1, 0,
|
|
589
|
+
-1 that is in the sense of &lt;=&gt;)</p></p>
|
|
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|
+
|
|
591
|
+
<pre></div></pre>
|
|
592
|
+
|
|
593
|
+
<p></div> <div class=“tags”></p>
|
|
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|
+
|
|
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|
+
<p></div><table class=“source_code”></p>
|
|
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|
+
|
|
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|
+
<pre><tr>
|
|
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|
+
<td>
|
|
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|
+
<pre class="lines"></pre>
|
|
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|
+
|
|
601
|
+
<p>63 64 65</pre></p>
|
|
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|
+
|
|
603
|
+
<pre></td>
|
|
604
|
+
<td>
|
|
605
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 63</span></pre>
|
|
606
|
+
|
|
607
|
+
<p><span class='kw'>def</span> <span class='id
|
|
608
|
+
identifier rubyid_compare'>compare</span><span
|
|
609
|
+
class='lparen'>(</span><span
|
|
610
|
+
class='op'>&amp;</span><span class='id
|
|
611
|
+
identifier rubyid_block'>block</span><span
|
|
612
|
+
class='rparen'>)</span></p>
|
|
613
|
+
|
|
614
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_compare_func'>compare_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
|
|
615
|
+
|
|
616
|
+
<p><span class='kw'>end</span></pre></p>
|
|
617
|
+
|
|
618
|
+
<pre> </td>
|
|
619
|
+
</tr></pre>
|
|
620
|
+
|
|
621
|
+
<p></table> </div></p>
|
|
622
|
+
|
|
623
|
+
<pre> <div class="method_details ">
|
|
624
|
+
<h3 class="signature " id="condition_boolean_vector-instance_method">
|
|
625
|
+
|
|
626
|
+
- (<tt>Object</tt>) <strong>condition_boolean_vector</strong>(vec, sig = :tanh)</pre>
|
|
627
|
+
|
|
628
|
+
<p></h3><div class=“docstring”></p>
|
|
629
|
+
|
|
630
|
+
<pre><div class="discussion"></pre>
|
|
631
|
+
|
|
632
|
+
<p><p>Helper function to Condition boolean vectors to be +1 if true, -1
|
|
633
|
+
if false (0 if sigmoid)</p></p>
|
|
634
|
+
|
|
635
|
+
<pre></div></pre>
|
|
636
|
+
|
|
637
|
+
<p></div> <div class=“tags”></p>
|
|
638
|
+
|
|
639
|
+
<p></div><table class=“source_code”></p>
|
|
640
|
+
|
|
641
|
+
<pre><tr>
|
|
642
|
+
<td>
|
|
643
|
+
<pre class="lines"></pre>
|
|
644
|
+
|
|
645
|
+
<p>81 82 83</pre></p>
|
|
646
|
+
|
|
647
|
+
<pre></td>
|
|
648
|
+
<td>
|
|
649
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 81</span></pre>
|
|
650
|
+
|
|
651
|
+
<p><span class='kw'>def</span> <span class='id
|
|
652
|
+
identifier
|
|
653
|
+
rubyid_condition_boolean_vector'>condition_boolean_vector</span><span
|
|
654
|
+
class='lparen'>(</span><span class='id identifier
|
|
655
|
+
rubyid_vec'>vec</span><span
|
|
656
|
+
class='comma'>,</span> <span class='id identifier
|
|
657
|
+
rubyid_sig'>sig</span> <span
|
|
658
|
+
class='op'>=</span> <span
|
|
659
|
+
class='symbol'>:tanh</span><span
|
|
660
|
+
class='rparen'>)</span></p>
|
|
661
|
+
|
|
662
|
+
<pre><span class='id identifier rubyid_vec'>vec</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_b'>b</span><span class='op'>|</span> <span class='id identifier rubyid_b'>b</span> <span class='op'>?</span> <span class='int'>1</span> <span class='op'>:</span> <span class='lparen'>(</span><span class='lparen'>(</span><span class='id identifier rubyid_sig'>sig</span> <span class='op'>==</span> <span class='symbol'>:sigmoid</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='int'>0</span> <span class='op'>:</span> <span class='op'>-</span><span class='int'>1</span><span class='rparen'>)</span><span class='rbrace'>}</span></pre>
|
|
663
|
+
|
|
664
|
+
<p><span class='kw'>end</span></pre></p>
|
|
665
|
+
|
|
666
|
+
<pre> </td>
|
|
667
|
+
</tr></pre>
|
|
668
|
+
|
|
669
|
+
<p></table> </div></p>
|
|
670
|
+
|
|
671
|
+
<pre> <div class="method_details ">
|
|
672
|
+
<h3 class="signature " id="cost-instance_method">
|
|
673
|
+
|
|
674
|
+
- (<tt>Object</tt>) <strong>cost</strong>(&amp;block)</pre>
|
|
675
|
+
|
|
676
|
+
<p></h3><div class=“docstring”></p>
|
|
677
|
+
|
|
678
|
+
<pre><div class="discussion"></pre>
|
|
679
|
+
|
|
680
|
+
<p><p>Calculation to add the cost to the fitness, resulting in a fitness
|
|
681
|
+
that incorporates the cost for sorting purposes.</p></p>
|
|
682
|
+
|
|
683
|
+
<pre></div></pre>
|
|
684
|
+
|
|
685
|
+
<p></div> <div class=“tags”></p>
|
|
686
|
+
|
|
687
|
+
<p></div><table class=“source_code”></p>
|
|
688
|
+
|
|
689
|
+
<pre><tr>
|
|
690
|
+
<td>
|
|
691
|
+
<pre class="lines"></pre>
|
|
692
|
+
|
|
693
|
+
<p>69 70 71</pre></p>
|
|
694
|
+
|
|
695
|
+
<pre></td>
|
|
696
|
+
<td>
|
|
697
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 69</span></pre>
|
|
698
|
+
|
|
699
|
+
<p><span class='kw'>def</span> <span class='id
|
|
700
|
+
identifier rubyid_cost'>cost</span><span
|
|
701
|
+
class='lparen'>(</span><span
|
|
702
|
+
class='op'>&amp;</span><span class='id
|
|
703
|
+
identifier rubyid_block'>block</span><span
|
|
704
|
+
class='rparen'>)</span></p>
|
|
705
|
+
|
|
706
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_cost_func'>cost_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
|
|
707
|
+
|
|
708
|
+
<p><span class='kw'>end</span></pre></p>
|
|
709
|
+
|
|
710
|
+
<pre> </td>
|
|
711
|
+
</tr></pre>
|
|
712
|
+
|
|
713
|
+
<p></table> </div></p>
|
|
714
|
+
|
|
715
|
+
<pre> <div class="method_details ">
|
|
716
|
+
<h3 class="signature " id="define-instance_method">
|
|
717
|
+
|
|
718
|
+
- (<tt>Object</tt>) <strong>define</strong>(name = NEAT.random_name_generator, &amp;block)</pre>
|
|
719
|
+
|
|
720
|
+
<p></h3><div class=“docstring”></p>
|
|
721
|
+
|
|
722
|
+
<pre><div class="discussion"></pre>
|
|
723
|
+
|
|
724
|
+
<p><p>DSL – Define defines the parameters to the controller.</p></p>
|
|
725
|
+
|
|
726
|
+
<pre></div></pre>
|
|
727
|
+
|
|
728
|
+
<p></div> <div class=“tags”></p>
|
|
729
|
+
|
|
730
|
+
<p></div><table class=“source_code”></p>
|
|
731
|
+
|
|
732
|
+
<pre><tr>
|
|
733
|
+
<td>
|
|
734
|
+
<pre class="lines"></pre>
|
|
735
|
+
|
|
736
|
+
<p>15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35
|
|
737
|
+
36</pre></p>
|
|
738
|
+
|
|
739
|
+
<pre></td>
|
|
740
|
+
<td>
|
|
741
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 15</span></pre>
|
|
742
|
+
|
|
743
|
+
<p><span class='kw'>def</span> <span class='id
|
|
744
|
+
identifier rubyid_define'>define</span><span
|
|
745
|
+
class='lparen'>(</span><span class='id identifier
|
|
746
|
+
rubyid_name'>name</span> <span
|
|
747
|
+
class='op'>=</span> <span
|
|
748
|
+
class='const'>NEAT</span><span
|
|
749
|
+
class='period'>.</span><span class='id identifier
|
|
750
|
+
rubyid_random_name_generator'>random_name_generator</span><span
|
|
751
|
+
class='comma'>,</span> <span
|
|
752
|
+
class='op'>&amp;</span><span class='id
|
|
753
|
+
identifier rubyid_block'>block</span><span
|
|
754
|
+
class='rparen'>)</span></p>
|
|
755
|
+
|
|
756
|
+
<pre><span class='lbracket'>[</span>
|
|
757
|
+
<span class='symbol'>:inputs</span><span class='comma'>,</span>
|
|
758
|
+
<span class='symbol'>:outputs</span><span class='comma'>,</span>
|
|
759
|
+
<span class='symbol'>:hidden</span> <span class='comment'># we really don&#39;t care about mapping hidden neurons, but we&#39;ll ignore them later.</pre>
|
|
760
|
+
|
|
761
|
+
<p></span> <span class='rbracket'>]</span><span
|
|
762
|
+
class='period'>.</span><span class='id identifier
|
|
763
|
+
rubyid_each'>each</span> <span
|
|
764
|
+
class='kw'>do</span> <span
|
|
765
|
+
class='op'>|</span><span class='id identifier
|
|
766
|
+
rubyid_iometh'>iometh</span><span
|
|
767
|
+
class='op'>|</span></p>
|
|
768
|
+
|
|
769
|
+
<pre class="ruby"> <span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'id identifier rubyid_instance_eval'</span><span class="ruby-operator">></span><span class="ruby-identifier">instance_eval</span><span class="ruby-operator"><</span><span class="ruby-regexp">/span> <span class='tstring'><span class='tstring_beg'>%Q[</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'tstring_content'</span><span class="ruby-operator">></span>
|
|
770
|
+
<span class="ruby-keyword">def</span> <span class="ruby-operator"><</span><span class="ruby-operator">/</span><span class="ruby-identifier">span</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'embexpr_beg'</span><span class="ruby-operator">></span><span class="ruby-comment">#{</span><span class='id identifier rubyid_iometh'>iometh</span><span class='embexpr_end'>}</span><span class='tstring_content'>(nodes = nil, &amp;block)</span>
|
|
771
|
+
<span class="ruby-identifier">neui</span> = <span class="ruby-keyword">unless</span> <span class="ruby-identifier">nodes</span>.<span class="ruby-identifier">nil?</span>
|
|
772
|
+
<span class="ruby-identifier">nodes</span>
|
|
773
|
+
<span class="ruby-keyword">else</span>
|
|
774
|
+
<span class="ruby-identifier">block</span>.()
|
|
775
|
+
<span class="ruby-keyword">end</span>
|
|
776
|
+
<span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-identifier">controller</span>.<span class="ruby-identifier">neural_</span><span class="ruby-operator"><</span><span class="ruby-node">/span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_iometh'>iometh</span><span class='embexpr_end'>}</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'tstring_content'</span><span class="ruby-operator">></span> = <span class="ruby-keyword">if</span> <span class="ruby-identifier">neui</span>.<span class="ruby-identifier">kind_of?</span> <span class="ruby-constant">Hash</span>
|
|
777
|
+
<span class="ruby-identifier">neui</span>
|
|
778
|
+
<span class="ruby-keyword">else</span>
|
|
779
|
+
<span class="ruby-constant">Hash</span>[<span class="ruby-identifier">neui</span>.<span class="ruby-identifier">map</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">n</span><span class="ruby-operator">|</span> [<span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-identifier">random_name_generator</span>, <span class="ruby-identifier">n</span>]}]
|
|
780
|
+
<span class="ruby-keyword">end</span>
|
|
781
|
+
<span class="ruby-keyword">end</span><span class="ruby-operator"><</span><span class="ruby-regexp">/span><span class='tstring_end'>]</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-regexp">/span>
|
|
782
|
+
<span class='kw'>end</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span>
|
|
783
|
+
<span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'id identifier rubyid_block'</span><span class="ruby-operator">></span><span class="ruby-identifier">block</span><span class="ruby-operator"><</span><span class="ruby-regexp">/span><span class='period'>.</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'lparen'</span><span class="ruby-operator">></span>(<span class="ruby-operator"><</span><span class="ruby-regexp">/span><span class='const'>NEAT</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'op'</span><span class="ruby-operator">></span><span class="ruby-operator">::</span><span class="ruby-operator"><</span><span class="ruby-regexp">/span><span class='id identifier rubyid_controller'>controller</s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'rparen'</span><span class="ruby-operator">></span>)<span class="ruby-operator"><</span><span class="ruby-regexp">/span>
|
|
784
|
+
</span></pre>
|
|
785
|
+
|
|
786
|
+
<p><span class='kw'>end</span></pre></p>
|
|
787
|
+
|
|
788
|
+
<pre> </td>
|
|
789
|
+
</tr></pre>
|
|
790
|
+
|
|
791
|
+
<p></table> </div></p>
|
|
792
|
+
|
|
793
|
+
<pre> <div class="method_details ">
|
|
794
|
+
<h3 class="signature " id="evolve-instance_method">
|
|
795
|
+
|
|
796
|
+
- (<tt>Object</tt>) <strong>evolve</strong>(&amp;block)</pre>
|
|
797
|
+
|
|
798
|
+
<p></h3><div class=“docstring”></p>
|
|
799
|
+
|
|
800
|
+
<pre><div class="discussion"></pre>
|
|
801
|
+
|
|
802
|
+
<p><p>DSL – Run evolution</p></p>
|
|
803
|
+
|
|
804
|
+
<pre></div></pre>
|
|
805
|
+
|
|
806
|
+
<p></div> <div class=“tags”></p>
|
|
807
|
+
|
|
808
|
+
<p></div><table class=“source_code”></p>
|
|
809
|
+
|
|
810
|
+
<pre><tr>
|
|
811
|
+
<td>
|
|
812
|
+
<pre class="lines"></pre>
|
|
813
|
+
|
|
814
|
+
<p>39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63
|
|
815
|
+
64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88
|
|
816
|
+
89 90 91 92 93 94 95 96 97 98 99 100</pre></p>
|
|
817
|
+
|
|
818
|
+
<pre></td>
|
|
819
|
+
<td>
|
|
820
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 39</span></pre>
|
|
821
|
+
|
|
822
|
+
<p><span class='kw'>def</span> <span class='id
|
|
823
|
+
identifier rubyid_evolve'>evolve</span><span
|
|
824
|
+
class='lparen'>(</span><span
|
|
825
|
+
class='op'>&amp;</span><span class='id
|
|
826
|
+
identifier rubyid_block'>block</span><span
|
|
827
|
+
class='rparen'>)</span></p>
|
|
828
|
+
|
|
829
|
+
<pre><span class='comment'># Query function is called with the sequence (time evolution) number,</pre>
|
|
830
|
+
|
|
831
|
+
<p></span> <span class='comment'># and returns an array
|
|
832
|
+
or hash of parameters that will be given </span> <span
|
|
833
|
+
class='comment'># to the input nodes. In the case of hash, the
|
|
834
|
+
keys in the hash </span> <span class='comment'># shall
|
|
835
|
+
correspond to the names given to the input neurons. </span> <span
|
|
836
|
+
class='kw'>def</span> <span class='id identifier
|
|
837
|
+
rubyid_query'>query</span><span
|
|
838
|
+
class='lparen'>(</span><span
|
|
839
|
+
class='op'>&amp;</span><span class='id
|
|
840
|
+
identifier rubyid_block'>block</span><span
|
|
841
|
+
class='rparen'>)</span></p>
|
|
842
|
+
|
|
843
|
+
<pre> <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_query_func'>query_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
844
|
+
<span class='kw'>end</span>
|
|
845
|
+
|
|
846
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_recurrence'>recurrence</span><span class='lparen'>(</span><span class='op'>&amp;</span><span class='id identifier rubyid_block'>block</span><span class='rparen'>)</span>
|
|
847
|
+
<span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_recurrence_func'>recurrence_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
848
|
+
<span class='kw'>end</span>
|
|
849
|
+
|
|
850
|
+
<span class='comment'># fitness function calls the block with 2 vectors or two hashes, input and output</pre>
|
|
851
|
+
|
|
852
|
+
<p></span> <span class='comment'># vectors of the critter
|
|
853
|
+
being evaluated for fitness, as well as a sequence </span> <span
|
|
854
|
+
class='comment'># number that can be used to index what the
|
|
855
|
+
actual output should be. </span> <span
|
|
856
|
+
class='comment'># |vin, vout, seq| </span> <span
|
|
857
|
+
class='kw'>def</span> <span class='id identifier
|
|
858
|
+
rubyid_fitness'>fitness</span><span
|
|
859
|
+
class='lparen'>(</span><span
|
|
860
|
+
class='op'>&amp;</span><span class='id
|
|
861
|
+
identifier rubyid_block'>block</span><span
|
|
862
|
+
class='rparen'>)</span></p>
|
|
863
|
+
|
|
864
|
+
<pre> <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_fitness_func'>fitness_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
865
|
+
<span class='kw'>end</span>
|
|
866
|
+
|
|
867
|
+
<span class='comment'># Fitness ordering -- given 2 fitness numbers,</pre>
|
|
868
|
+
|
|
869
|
+
<p></span> <span class='comment'># use the
|
|
870
|
+
&lt;=&gt; to compare them (or the equivalent, following
|
|
871
|
+
</span> <span class='comment'># the +1, 0, -1 that is
|
|
872
|
+
in the sense of &lt;=&gt;) </span> <span
|
|
873
|
+
class='kw'>def</span> <span class='id identifier
|
|
874
|
+
rubyid_compare'>compare</span><span
|
|
875
|
+
class='lparen'>(</span><span
|
|
876
|
+
class='op'>&amp;</span><span class='id
|
|
877
|
+
identifier rubyid_block'>block</span><span
|
|
878
|
+
class='rparen'>)</span></p>
|
|
879
|
+
|
|
880
|
+
<pre> <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_compare_func'>compare_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
881
|
+
<span class='kw'>end</span>
|
|
882
|
+
|
|
883
|
+
<span class='comment'># Calculation to add the cost to the fitness, resulting in a fitness</pre>
|
|
884
|
+
|
|
885
|
+
<p></span> <span class='comment'># that incorporates the
|
|
886
|
+
cost for sorting purposes. </span> <span
|
|
887
|
+
class='kw'>def</span> <span class='id identifier
|
|
888
|
+
rubyid_cost'>cost</span><span
|
|
889
|
+
class='lparen'>(</span><span
|
|
890
|
+
class='op'>&amp;</span><span class='id
|
|
891
|
+
identifier rubyid_block'>block</span><span
|
|
892
|
+
class='rparen'>)</span></p>
|
|
893
|
+
|
|
894
|
+
<pre> <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_cost_func'>cost_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
895
|
+
<span class='kw'>end</span>
|
|
896
|
+
|
|
897
|
+
<span class='comment'># Stop the progression once the fitness criteria is reached</pre>
|
|
898
|
+
|
|
899
|
+
<p></span> <span class='comment'># for the most fit
|
|
900
|
+
critter </span> <span class='kw'>def</span>
|
|
901
|
+
<span class='id identifier
|
|
902
|
+
rubyid_stop_on_fitness'>stop_on_fitness</span><span
|
|
903
|
+
class='lparen'>(</span><span
|
|
904
|
+
class='op'>&amp;</span><span class='id
|
|
905
|
+
identifier rubyid_block'>block</span><span
|
|
906
|
+
class='rparen'>)</span></p>
|
|
907
|
+
|
|
908
|
+
<pre> <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_stop_on_fit_func'>stop_on_fit_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
909
|
+
<span class='kw'>end</span>
|
|
910
|
+
|
|
911
|
+
<span class='comment'># Helper function to</pre>
|
|
912
|
+
|
|
913
|
+
<p></span> <span class='comment'># Condition boolean
|
|
914
|
+
vectors to be +1 if true, -1 if false (0 if sigmoid) </span>
|
|
915
|
+
<span class='kw'>def</span> <span class='id
|
|
916
|
+
identifier
|
|
917
|
+
rubyid_condition_boolean_vector'>condition_boolean_vector</span><span
|
|
918
|
+
class='lparen'>(</span><span class='id identifier
|
|
919
|
+
rubyid_vec'>vec</span><span
|
|
920
|
+
class='comma'>,</span> <span class='id identifier
|
|
921
|
+
rubyid_sig'>sig</span> <span
|
|
922
|
+
class='op'>=</span> <span
|
|
923
|
+
class='symbol'>:tanh</span><span
|
|
924
|
+
class='rparen'>)</span></p>
|
|
925
|
+
|
|
926
|
+
<pre> <span class='id identifier rubyid_vec'>vec</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_b'>b</span><span class='op'>|</span> <span class='id identifier rubyid_b'>b</span> <span class='op'>?</span> <span class='int'>1</span> <span class='op'>:</span> <span class='lparen'>(</span><span class='lparen'>(</span><span class='id identifier rubyid_sig'>sig</span> <span class='op'>==</span> <span class='symbol'>:sigmoid</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='int'>0</span> <span class='op'>:</span> <span class='op'>-</span><span class='int'>1</span><span class='rparen'>)</span><span class='rbrace'>}</span>
|
|
927
|
+
<span class='kw'>end</span>
|
|
928
|
+
|
|
929
|
+
<span class='comment'># Helper function to</pre>
|
|
930
|
+
|
|
931
|
+
<p></span> <span class='comment'># Uncondition boolean
|
|
932
|
+
vectors to be +1 if true, -1 if false </span> <span
|
|
933
|
+
class='comment'># FIXME we need a better discrimination function
|
|
934
|
+
</span> <span class='kw'>def</span> <span
|
|
935
|
+
class='id identifier
|
|
936
|
+
rubyid_uncondition_boolean_vector'>uncondition_boolean_vector</span><span
|
|
937
|
+
class='lparen'>(</span><span class='id identifier
|
|
938
|
+
rubyid_vec'>vec</span><span
|
|
939
|
+
class='comma'>,</span> <span class='id identifier
|
|
940
|
+
rubyid_sig'>sig</span> <span
|
|
941
|
+
class='op'>=</span> <span
|
|
942
|
+
class='symbol'>:tanh</span><span
|
|
943
|
+
class='rparen'>)</span></p>
|
|
944
|
+
|
|
945
|
+
<pre> <span class='id identifier rubyid_vec'>vec</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_o'>o</span><span class='op'>|</span> <span class='id identifier rubyid_o'>o</span> <span class='op'>&gt;</span> <span class='lparen'>(</span><span class='lparen'>(</span><span class='id identifier rubyid_sig'>sig</span> <span class='op'>==</span> <span class='symbol'>:sigmoid</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='float'>0.5</span> <span class='op'>:</span> <span class='int'>0</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='kw'>true</span> <span class='op'>:</span> <span class='kw'>false</span><span class='rbrace'>}</span>
|
|
946
|
+
<span class='kw'>end</span>
|
|
947
|
+
|
|
948
|
+
<span class='comment'># Helper function to do a simple fitness calculation</pre>
|
|
949
|
+
|
|
950
|
+
<p></span> <span class='comment'># on the basis of the
|
|
951
|
+
sum of the square of the diffences </span> <span
|
|
952
|
+
class='comment'># of the element in the two vectors.
|
|
953
|
+
</span> <span class='kw'>def</span> <span
|
|
954
|
+
class='id identifier
|
|
955
|
+
rubyid_simple_fitness_error'>simple_fitness_error</span><span
|
|
956
|
+
class='lparen'>(</span><span class='id identifier
|
|
957
|
+
rubyid_v1'>v1</span><span
|
|
958
|
+
class='comma'>,</span> <span class='id identifier
|
|
959
|
+
rubyid_v2'>v2</span><span
|
|
960
|
+
class='rparen'>)</span></p>
|
|
961
|
+
|
|
962
|
+
<pre> <span class='id identifier rubyid_sqrt'>sqrt</span> <span class='id identifier rubyid_v1'>v1</span><span class='period'>.</span><span class='id identifier rubyid_zip'>zip</span><span class='lparen'>(</span><span class='id identifier rubyid_v2'>v2</span><span class='rparen'>)</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_a'>a</span><span class='comma'>,</span> <span class='id identifier rubyid_b'>b</span><span class='op'>|</span> <span class='lparen'>(</span><span class='id identifier rubyid_a'>a</span> <span class='op'>-</span> <span class='id identifier rubyid_b'>b</span><span class='rparen'>)</span> <span class='op'>**</span> <span class='float'>2.0</span><span class='rbrace'>}</span><span class='period'>.</span><span class='id identifier rubyid_reduce'>reduce</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_m'>m</span><span class='comma'>,</span> <span class='id identifier rubyid_c'>c</span><span class='op'>|</span> <span class='id identifier rubyid_m'>m</span> <span class='op'>+</span> <span class='id identifier rubyid_c'>c</span><span class='rbrace'>}</span>
|
|
963
|
+
<span class='kw'>end</span>
|
|
964
|
+
|
|
965
|
+
<span class='id identifier rubyid_block'>block</span><span class='period'>.</span><span class='lparen'>(</span><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='rparen'>)</span></pre>
|
|
966
|
+
|
|
967
|
+
<p><span class='kw'>end</span></pre></p>
|
|
968
|
+
|
|
969
|
+
<pre> </td>
|
|
970
|
+
</tr></pre>
|
|
971
|
+
|
|
972
|
+
<p></table> </div></p>
|
|
973
|
+
|
|
974
|
+
<pre> <div class="method_details ">
|
|
975
|
+
<h3 class="signature " id="fitness-instance_method">
|
|
976
|
+
|
|
977
|
+
- (<tt>Object</tt>) <strong>fitness</strong>(&amp;block)</pre>
|
|
978
|
+
|
|
979
|
+
<p></h3><div class=“docstring”></p>
|
|
980
|
+
|
|
981
|
+
<pre><div class="discussion"></pre>
|
|
982
|
+
|
|
983
|
+
<p><p>fitness function calls the block with 2 vectors or two hashes,
|
|
984
|
+
input and output vectors of the critter being evaluated for fitness, as
|
|
985
|
+
well as a sequence number that can be used to index what the actual output
|
|
986
|
+
should be. |vin, vout, seq|</p></p>
|
|
987
|
+
|
|
988
|
+
<pre></div></pre>
|
|
989
|
+
|
|
990
|
+
<p></div> <div class=“tags”></p>
|
|
991
|
+
|
|
992
|
+
<p></div><table class=“source_code”></p>
|
|
993
|
+
|
|
994
|
+
<pre><tr>
|
|
995
|
+
<td>
|
|
996
|
+
<pre class="lines"></pre>
|
|
997
|
+
|
|
998
|
+
<p>56 57 58</pre></p>
|
|
999
|
+
|
|
1000
|
+
<pre></td>
|
|
1001
|
+
<td>
|
|
1002
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 56</span></pre>
|
|
1003
|
+
|
|
1004
|
+
<p><span class='kw'>def</span> <span class='id
|
|
1005
|
+
identifier rubyid_fitness'>fitness</span><span
|
|
1006
|
+
class='lparen'>(</span><span
|
|
1007
|
+
class='op'>&amp;</span><span class='id
|
|
1008
|
+
identifier rubyid_block'>block</span><span
|
|
1009
|
+
class='rparen'>)</span></p>
|
|
1010
|
+
|
|
1011
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_fitness_func'>fitness_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
|
|
1012
|
+
|
|
1013
|
+
<p><span class='kw'>end</span></pre></p>
|
|
1014
|
+
|
|
1015
|
+
<pre> </td>
|
|
1016
|
+
</tr></pre>
|
|
1017
|
+
|
|
1018
|
+
<p></table> </div></p>
|
|
1019
|
+
|
|
1020
|
+
<pre> <div class="method_details ">
|
|
1021
|
+
<h3 class="signature " id="query-instance_method">
|
|
1022
|
+
|
|
1023
|
+
- (<tt>Object</tt>) <strong>query</strong>(&amp;block)</pre>
|
|
1024
|
+
|
|
1025
|
+
<p></h3><div class=“docstring”></p>
|
|
1026
|
+
|
|
1027
|
+
<pre><div class="discussion"></pre>
|
|
1028
|
+
|
|
1029
|
+
<p><p>Query function is called with the sequence (time evolution)
|
|
1030
|
+
number, and returns an array or hash of parameters that will be given to
|
|
1031
|
+
the input nodes. In the case of hash, the keys in the hash shall correspond
|
|
1032
|
+
to the names given to the input neurons.</p></p>
|
|
1033
|
+
|
|
1034
|
+
<pre></div></pre>
|
|
1035
|
+
|
|
1036
|
+
<p></div> <div class=“tags”></p>
|
|
1037
|
+
|
|
1038
|
+
<p></div><table class=“source_code”></p>
|
|
1039
|
+
|
|
1040
|
+
<pre><tr>
|
|
1041
|
+
<td>
|
|
1042
|
+
<pre class="lines"></pre>
|
|
1043
|
+
|
|
1044
|
+
<p>44 45 46</pre></p>
|
|
1045
|
+
|
|
1046
|
+
<pre></td>
|
|
1047
|
+
<td>
|
|
1048
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 44</span></pre>
|
|
1049
|
+
|
|
1050
|
+
<p><span class='kw'>def</span> <span class='id
|
|
1051
|
+
identifier rubyid_query'>query</span><span
|
|
1052
|
+
class='lparen'>(</span><span
|
|
1053
|
+
class='op'>&amp;</span><span class='id
|
|
1054
|
+
identifier rubyid_block'>block</span><span
|
|
1055
|
+
class='rparen'>)</span></p>
|
|
1056
|
+
|
|
1057
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_query_func'>query_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
|
|
1058
|
+
|
|
1059
|
+
<p><span class='kw'>end</span></pre></p>
|
|
1060
|
+
|
|
1061
|
+
<pre> </td>
|
|
1062
|
+
</tr></pre>
|
|
1063
|
+
|
|
1064
|
+
<p></table> </div></p>
|
|
1065
|
+
|
|
1066
|
+
<pre> <div class="method_details ">
|
|
1067
|
+
<h3 class="signature " id="recurrence-instance_method">
|
|
1068
|
+
|
|
1069
|
+
- (<tt>Object</tt>) <strong>recurrence</strong>(&amp;block)</pre>
|
|
1070
|
+
|
|
1071
|
+
<p></h3><table class=“source_code”></p>
|
|
1072
|
+
|
|
1073
|
+
<pre><tr>
|
|
1074
|
+
<td>
|
|
1075
|
+
<pre class="lines"></pre>
|
|
1076
|
+
|
|
1077
|
+
<p>48 49 50</pre></p>
|
|
1078
|
+
|
|
1079
|
+
<pre></td>
|
|
1080
|
+
<td>
|
|
1081
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 48</span></pre>
|
|
1082
|
+
|
|
1083
|
+
<p><span class='kw'>def</span> <span class='id
|
|
1084
|
+
identifier rubyid_recurrence'>recurrence</span><span
|
|
1085
|
+
class='lparen'>(</span><span
|
|
1086
|
+
class='op'>&amp;</span><span class='id
|
|
1087
|
+
identifier rubyid_block'>block</span><span
|
|
1088
|
+
class='rparen'>)</span></p>
|
|
1089
|
+
|
|
1090
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_recurrence_func'>recurrence_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
|
|
1091
|
+
|
|
1092
|
+
<p><span class='kw'>end</span></pre></p>
|
|
1093
|
+
|
|
1094
|
+
<pre> </td>
|
|
1095
|
+
</tr></pre>
|
|
1096
|
+
|
|
1097
|
+
<p></table> </div></p>
|
|
1098
|
+
|
|
1099
|
+
<pre> <div class="method_details ">
|
|
1100
|
+
<h3 class="signature " id="report-instance_method">
|
|
1101
|
+
|
|
1102
|
+
- (<tt>Object</tt>) <strong>report</strong>(&amp;block)</pre>
|
|
1103
|
+
|
|
1104
|
+
<p></h3><div class=“docstring”></p>
|
|
1105
|
+
|
|
1106
|
+
<pre><div class="discussion"></pre>
|
|
1107
|
+
|
|
1108
|
+
<p><p>Report on evaluations</p></p>
|
|
1109
|
+
|
|
1110
|
+
<pre></div></pre>
|
|
1111
|
+
|
|
1112
|
+
<p></div> <div class=“tags”></p>
|
|
1113
|
+
|
|
1114
|
+
<p></div><table class=“source_code”></p>
|
|
1115
|
+
|
|
1116
|
+
<pre><tr>
|
|
1117
|
+
<td>
|
|
1118
|
+
<pre class="lines"></pre>
|
|
1119
|
+
|
|
1120
|
+
<p>103 104 105</pre></p>
|
|
1121
|
+
|
|
1122
|
+
<pre></td>
|
|
1123
|
+
<td>
|
|
1124
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 103</span></pre>
|
|
1125
|
+
|
|
1126
|
+
<p><span class='kw'>def</span> <span class='id
|
|
1127
|
+
identifier rubyid_report'>report</span><span
|
|
1128
|
+
class='lparen'>(</span><span
|
|
1129
|
+
class='op'>&amp;</span><span class='id
|
|
1130
|
+
identifier rubyid_block'>block</span><span
|
|
1131
|
+
class='rparen'>)</span></p>
|
|
1132
|
+
|
|
1133
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_report_hook'>report_hook</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
|
|
1134
|
+
|
|
1135
|
+
<p><span class='kw'>end</span></pre></p>
|
|
1136
|
+
|
|
1137
|
+
<pre> </td>
|
|
1138
|
+
</tr></pre>
|
|
1139
|
+
|
|
1140
|
+
<p></table> </div></p>
|
|
1141
|
+
|
|
1142
|
+
<pre> <div class="method_details ">
|
|
1143
|
+
<h3 class="signature " id="run_engine-instance_method">
|
|
1144
|
+
|
|
1145
|
+
- (<tt>Object</tt>) <strong>run_engine</strong>(&amp;block)</pre>
|
|
1146
|
+
|
|
1147
|
+
<p></h3><div class=“docstring”></p>
|
|
1148
|
+
|
|
1149
|
+
<pre><div class="discussion"></pre>
|
|
1150
|
+
|
|
1151
|
+
<p><p>Run the engine. The block is called on each generation.</p></p>
|
|
1152
|
+
|
|
1153
|
+
<pre></div></pre>
|
|
1154
|
+
|
|
1155
|
+
<p></div> <div class=“tags”></p>
|
|
1156
|
+
|
|
1157
|
+
<p></div><table class=“source_code”></p>
|
|
1158
|
+
|
|
1159
|
+
<pre><tr>
|
|
1160
|
+
<td>
|
|
1161
|
+
<pre class="lines"></pre>
|
|
1162
|
+
|
|
1163
|
+
<p>108 109 110 111</pre></p>
|
|
1164
|
+
|
|
1165
|
+
<pre></td>
|
|
1166
|
+
<td>
|
|
1167
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 108</span></pre>
|
|
1168
|
+
|
|
1169
|
+
<p><span class='kw'>def</span> <span class='id
|
|
1170
|
+
identifier rubyid_run_engine'>run_engine</span><span
|
|
1171
|
+
class='lparen'>(</span><span
|
|
1172
|
+
class='op'>&amp;</span><span class='id
|
|
1173
|
+
identifier rubyid_block'>block</span><span
|
|
1174
|
+
class='rparen'>)</span></p>
|
|
1175
|
+
|
|
1176
|
+
<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_end_run_func'>end_run_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span>
|
|
1177
|
+
<span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_run'>run</span></pre>
|
|
1178
|
+
|
|
1179
|
+
<p><span class='kw'>end</span></pre></p>
|
|
1180
|
+
|
|
1181
|
+
<pre> </td>
|
|
1182
|
+
</tr></pre>
|
|
1183
|
+
|
|
1184
|
+
<p></table> </div></p>
|
|
1185
|
+
|
|
1186
|
+
<pre> <div class="method_details ">
|
|
1187
|
+
<h3 class="signature " id="simple_fitness_error-instance_method">
|
|
1188
|
+
|
|
1189
|
+
- (<tt>Object</tt>) <strong>simple_fitness_error</strong>(v1, v2)</pre>
|
|
1190
|
+
|
|
1191
|
+
<p></h3><div class=“docstring”></p>
|
|
1192
|
+
|
|
1193
|
+
<pre><div class="discussion"></pre>
|
|
1194
|
+
|
|
1195
|
+
<p><p>Helper function to do a simple fitness calculation on the basis of
|
|
1196
|
+
the sum of the square of the diffences of the element in the two
|
|
1197
|
+
vectors.</p></p>
|
|
1198
|
+
|
|
1199
|
+
<pre></div></pre>
|
|
1200
|
+
|
|
1201
|
+
<p></div> <div class=“tags”></p>
|
|
1202
|
+
|
|
1203
|
+
<p></div><table class=“source_code”></p>
|
|
1204
|
+
|
|
1205
|
+
<pre><tr>
|
|
1206
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+
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<p>95 96 97</pre></p>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 95</span></pre>
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identifier
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rubyid_simple_fitness_error'>simple_fitness_error</span><span
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class='lparen'>(</span><span class='id identifier
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rubyid_v1'>v1</span><span
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<pre><span class='id identifier rubyid_sqrt'>sqrt</span> <span class='id identifier rubyid_v1'>v1</span><span class='period'>.</span><span class='id identifier rubyid_zip'>zip</span><span class='lparen'>(</span><span class='id identifier rubyid_v2'>v2</span><span class='rparen'>)</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_a'>a</span><span class='comma'>,</span> <span class='id identifier rubyid_b'>b</span><span class='op'>|</span> <span class='lparen'>(</span><span class='id identifier rubyid_a'>a</span> <span class='op'>-</span> <span class='id identifier rubyid_b'>b</span><span class='rparen'>)</span> <span class='op'>**</span> <span class='float'>2.0</span><span class='rbrace'>}</span><span class='period'>.</span><span class='id identifier rubyid_reduce'>reduce</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_m'>m</span><span class='comma'>,</span> <span class='id identifier rubyid_c'>c</span><span class='op'>|</span> <span class='id identifier rubyid_m'>m</span> <span class='op'>+</span> <span class='id identifier rubyid_c'>c</span><span class='rbrace'>}</span></pre>
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<p><p>Stop the progression once the fitness criteria is reached for the
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<pre class="code"><span class="info file"># File 'lib/rubyneat/dsl.rb', line 75</span></pre>
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<pre><span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_stop_on_fit_func'>stop_on_fit_func</span> <span class='op'>=</span> <span class='id identifier rubyid_block'>block</span></pre>
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<h3 class="signature " id="uncondition_boolean_vector-instance_method">
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- (<tt>Object</tt>) <strong>uncondition_boolean_vector</strong>(vec, sig = :tanh)</pre>
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<p><p>Helper function to Uncondition boolean vectors to be +1 if true,
|
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-1 if false FIXME we need a better discrimination function</p></p>
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<pre></div></pre>
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<p>88 89 90</pre></p>
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<p><span class='kw'>def</span> <span class='id
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rubyid_uncondition_boolean_vector'>uncondition_boolean_vector</span><span
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rubyid_vec'>vec</span><span
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<pre><span class='id identifier rubyid_vec'>vec</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_o'>o</span><span class='op'>|</span> <span class='id identifier rubyid_o'>o</span> <span class='op'>&gt;</span> <span class='lparen'>(</span><span class='lparen'>(</span><span class='id identifier rubyid_sig'>sig</span> <span class='op'>==</span> <span class='symbol'>:sigmoid</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='float'>0.5</span> <span class='op'>:</span> <span class='int'>0</span><span class='rparen'>)</span> <span class='op'>?</span> <span class='kw'>true</span> <span class='op'>:</span> <span class='kw'>false</span><span class='rbrace'>}</span></pre>
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Generated on Sun Mar 16 16:36:51 2014 by
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<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
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<p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
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