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<p class="inherited"><span class='object_link'><a href="NeatOb.html#controller-instance_method" title="NEAT::NeatOb#controller (method)">#controller</a></span>, <span class='object_link'><a href="NeatOb.html#name-instance_method" title="NEAT::NeatOb#name (method)">#name</a></span></p>
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<a href="#mutate%21-instance_method" title="#mutate! (instance method)">- (Object) <strong>mutate!</strong>(population) </a>
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<p class="inherited"><span class='object_link'><a href="NeatOb.html#log-instance_method" title="NEAT::NeatOb#log (method)">#log</a></span>, <span class='object_link'><a href="NeatOb.html#log-class_method" title="NEAT::NeatOb.log (method)">log</a></span>, <span class='object_link'><a href="NeatOb.html#to_s-instance_method" title="NEAT::NeatOb#to_s (method)">#to_s</a></span></p>
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<p>Returns a new instance of Evolver</p>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evolver.rb', line 13</span>
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<span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span><span class='lparen'>(</span><span class='id identifier rubyid_c'>c</span><span class='rparen'>)</span>
|
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|
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|
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<span class='ivar'>@critter_op</span> <span class='op'>=</span> <span class='const'>CritterOp</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span> <span class='kw'>self</span>
|
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<h3 class="signature first" id="npop-instance_method">
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- (<tt>Object</tt>) <strong>npop</strong> <span class="extras">(readonly)</span>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evolver.rb', line 11</span>
|
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|
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<span class='kw'>def</span> <span class='id identifier rubyid_npop'>npop</span>
|
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<span class='ivar'>@npop</span>
|
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<span class='kw'>end</span></pre>
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<h3 class="signature first" id="evolve-instance_method">
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- (<tt>Object</tt>) <strong>evolve</strong>(population)
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|
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|
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|
|
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|
|
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|
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<p>Returns the newly-evolved population.</p>
|
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evolver.rb', line 53</span>
|
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|
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<span class='kw'>def</span> <span class='id identifier rubyid_evolve'>evolve</span><span class='lparen'>(</span><span class='id identifier rubyid_population'>population</span><span class='rparen'>)</span>
|
|
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<span class='ivar'>@npop</span> <span class='op'>=</span> <span class='id identifier rubyid_population'>population</span><span class='period'>.</span><span class='id identifier rubyid_dclone'>dclone</span>
|
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|
|
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|
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<span class='comment'># Population sorting and evaluation for breeding, mutations, etc.
|
|
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|
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</span> <span class='id identifier rubyid_prepare_speciation!'>prepare_speciation!</span>
|
|
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|
+
<span class='id identifier rubyid_prepare_fitness!'>prepare_fitness!</span>
|
|
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|
+
<span class='id identifier rubyid_prepare_novelty!'>prepare_novelty!</span>
|
|
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|
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|
|
459
|
+
<span class='id identifier rubyid_mate!'>mate!</span>
|
|
460
|
+
|
|
461
|
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<span class='kw'>return</span> <span class='ivar'>@npop</span>
|
|
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|
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<span class='kw'>end</span></pre>
|
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<h3 class="signature " id="gen_initial_genes!-instance_method">
|
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|
|
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|
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- (<tt>Object</tt>) <strong>gen_initial_genes!</strong>(genotype)
|
|
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|
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</h3><div class="docstring">
|
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<div class="discussion">
|
|
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|
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|
|
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|
+
<p>Generate the initial genes for a given genotype. We key genes off their
|
|
481
|
+
innovation numbers.</p>
|
|
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|
+
|
|
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|
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|
|
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evolver.rb', line 20</span>
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<span class='kw'>def</span> <span class='id identifier rubyid_gen_initial_genes!'>gen_initial_genes!</span><span class='lparen'>(</span><span class='id identifier rubyid_genotype'>genotype</span><span class='rparen'>)</span>
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<span class='id identifier rubyid_genotype'>genotype</span><span class='period'>.</span><span class='id identifier rubyid_genes'>genes</span> <span class='op'>=</span> <span class='lbrace'>{</span><span class='rbrace'>}</span>
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<span class='id identifier rubyid_genotype'>genotype</span><span class='period'>.</span><span class='id identifier rubyid_neural_inputs'>neural_inputs</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_s1'>s1</span><span class='comma'>,</span> <span class='id identifier rubyid_input'>input</span><span class='op'>|</span>
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<span class='id identifier rubyid_genotype'>genotype</span><span class='period'>.</span><span class='id identifier rubyid_neural_outputs'>neural_outputs</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_s2'>s2</span><span class='comma'>,</span> <span class='id identifier rubyid_output'>output</span><span class='op'>|</span>
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<span class='id identifier rubyid_g'>g</span> <span class='op'>=</span> <span class='const'>Critter</span><span class='op'>::</span><span class='const'>Genotype</span><span class='op'>::</span><span class='const'>Gene</span><span class='lbracket'>[</span><span class='id identifier rubyid_genotype'>genotype</span><span class='comma'>,</span> <span class='id identifier rubyid_input'>input</span><span class='comma'>,</span> <span class='id identifier rubyid_output'>output</span><span class='comma'>,</span> <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_gaussian'>gaussian</span><span class='rbracket'>]</span>
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<span class='id identifier rubyid_genotype'>genotype</span><span class='period'>.</span><span class='id identifier rubyid_genes'>genes</span><span class='lbracket'>[</span><span class='id identifier rubyid_g'>g</span><span class='period'>.</span><span class='id identifier rubyid_innovation'>innovation</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='id identifier rubyid_g'>g</span>
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<span class='kw'>end</span>
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<span class='kw'>end</span>
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<span class='kw'>end</span></pre>
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</table>
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<div class="method_details ">
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<h3 class="signature " id="mutate!-instance_method">
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- (<tt>Object</tt>) <strong>mutate!</strong>(population)
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</h3><div class="docstring">
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<div class="discussion">
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<p>Here we mutate the population.</p>
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<div class="tags">
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</div><table class="source_code">
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<tr>
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<td>
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<pre class="lines">
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47</pre>
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</td>
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<td>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evolver.rb', line 31</span>
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<span class='kw'>def</span> <span class='id identifier rubyid_mutate!'>mutate!</span><span class='lparen'>(</span><span class='id identifier rubyid_population'>population</span><span class='rparen'>)</span>
|
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570
|
+
<span class='ivar'>@npop</span> <span class='op'>=</span> <span class='id identifier rubyid_population'>population</span>
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+
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<span class='kw'>if</span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_parms'>parms</span><span class='period'>.</span><span class='id identifier rubyid_mate_only_prob'>mate_only_prob</span><span class='period'>.</span><span class='id identifier rubyid_nil?'>nil?</span> <span class='kw'>or</span> <span class='id identifier rubyid_rand'>rand</span> <span class='op'>></span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_parms'>parms</span><span class='period'>.</span><span class='id identifier rubyid_mate_only_prob'>mate_only_prob</span>
|
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<span class='id identifier rubyid_log'>log</span><span class='period'>.</span><span class='id identifier rubyid_debug'>debug</span> <span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_content'>[[[ Neuron and Gene Giggling!</span><span class='tstring_end'>"</span></span>
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<span class='id identifier rubyid_mutate_perturb_gene_weights!'>mutate_perturb_gene_weights!</span>
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|
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<span class='id identifier rubyid_mutate_change_gene_weights!'>mutate_change_gene_weights!</span>
|
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|
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<span class='id identifier rubyid_mutate_add_neurons!'>mutate_add_neurons!</span>
|
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|
+
<span class='id identifier rubyid_mutate_change_neurons!'>mutate_change_neurons!</span>
|
|
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|
+
<span class='id identifier rubyid_mutate_add_genes!'>mutate_add_genes!</span>
|
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579
|
+
<span class='id identifier rubyid_mutate_disable_genes!'>mutate_disable_genes!</span>
|
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|
+
<span class='id identifier rubyid_mutate_reenable_genes!'>mutate_reenable_genes!</span>
|
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<span class='id identifier rubyid_log'>log</span><span class='period'>.</span><span class='id identifier rubyid_debug'>debug</span> <span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_content'>]]] End Neuron and Gene Giggling!\n</span><span class='tstring_end'>"</span></span>
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<span class='kw'>else</span>
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<span class='id identifier rubyid_log'>log</span><span class='period'>.</span><span class='id identifier rubyid_debug'>debug</span> <span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_content'>*** Mating only!</span><span class='tstring_end'>"</span></span>
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|
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<span class='kw'>end</span>
|
|
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|
+
<span class='kw'>end</span></pre>
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</div>
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</div>
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<div id="footer">
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Generated on Sun Apr 13 15:54:02 2014 by
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<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
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0.8.7.4 (ruby-2.1.1).
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