rubyneat 0.3.5.alpha.2

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  1. checksums.yaml +7 -0
  2. data/.directory +4 -0
  3. data/.gitignore.orig +20 -0
  4. data/.idea/.name +1 -0
  5. data/.idea/.rakeTasks +7 -0
  6. data/.idea/dictionaries/trader.xml +3 -0
  7. data/.idea/encodings.xml +5 -0
  8. data/.idea/misc.xml +5 -0
  9. data/.idea/modules.xml +9 -0
  10. data/.idea/rubyneat.iml +197 -0
  11. data/.idea/runConfigurations/invpend_neat.xml +26 -0
  12. data/.idea/runConfigurations/sigdebug_neat.xml +24 -0
  13. data/.idea/runConfigurations/xor_neat.xml +26 -0
  14. data/.idea/runConfigurations/xordebug_neat.xml +24 -0
  15. data/.idea/runConfigurations/xorsin_neat.xml +24 -0
  16. data/.idea/scopes/scope_settings.xml +5 -0
  17. data/.idea/vcs.xml +7 -0
  18. data/.idea/workspace.xml +1124 -0
  19. data/.semver +5 -0
  20. data/.yardoc/checksums +11 -0
  21. data/.yardoc/object_types +0 -0
  22. data/.yardoc/objects/root.dat +0 -0
  23. data/.yardoc/proxy_types +0 -0
  24. data/Gemfile +32 -0
  25. data/Gemfile.lock +135 -0
  26. data/Gemfile.lock.orig +147 -0
  27. data/Guardfile +8 -0
  28. data/Rakefile +61 -0
  29. data/bin/neat +83 -0
  30. data/config/application.rb +5 -0
  31. data/doc/ControllerPoint.html +125 -0
  32. data/doc/CuteA.html +286 -0
  33. data/doc/CuteB.html +297 -0
  34. data/doc/DSL.html +883 -0
  35. data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +518 -0
  36. data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +274 -0
  37. data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +366 -0
  38. data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +275 -0
  39. data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +274 -0
  40. data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +274 -0
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  42. data/doc/NEAT/Controller/NeatSettings.html +3985 -0
  43. data/doc/NEAT/Controller.html +2490 -0
  44. data/doc/NEAT/Critter/Genotype/Gene.html +979 -0
  45. data/doc/NEAT/Critter/Genotype.html +1601 -0
  46. data/doc/NEAT/Critter/Phenotype.html +603 -0
  47. data/doc/NEAT/Critter.html +1037 -0
  48. data/doc/NEAT/DSL.html +1255 -0
  49. data/doc/NEAT/Evaluator.html +420 -0
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  58. data/doc/NEAT/Neuron.html +1067 -0
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  64. data/doc/class_list.html +54 -0
  65. data/doc/css/common.css +1 -0
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  82. data/lib/rubyneat/default_neat.rb +10 -0
  83. data/lib/rubyneat/dsl.rb +130 -0
  84. data/lib/rubyneat/evaluator.rb +51 -0
  85. data/lib/rubyneat/evolver.rb +315 -0
  86. data/lib/rubyneat/expressor.rb +110 -0
  87. data/lib/rubyneat/graph.rb +95 -0
  88. data/lib/rubyneat/neuron.rb +152 -0
  89. data/lib/rubyneat/population.rb +227 -0
  90. data/lib/rubyneat/rubyneat.rb +429 -0
  91. data/lib/rubyneat.rb +8 -0
  92. data/neater/invpend_neat.rb +150 -0
  93. data/neater/rnlib/inverted_pendulum.rb +380 -0
  94. data/neater/rnlib/xor.rb +10 -0
  95. data/neater/sigdebug_neat.rb +136 -0
  96. data/neater/xor_neat.rb +137 -0
  97. data/neater/xoranalog_neat.rb +138 -0
  98. data/neater/xorsin_neat.rb +143 -0
  99. data/projectFilesBackup/.idea/rubyneat.iml +180 -0
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  209. data/rdoc/doc/js/app_js.html +423 -0
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data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html ADDED
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+ <!DOCTYPE html>
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+ <html>
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+ <head>
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+ <meta charset="UTF-8">
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+
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+ <title>InputNeuron.html - rubyneat 0.3.4</title>
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+
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+ <link href="../../../fonts.css" rel="stylesheet">
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+ <link href="../../../rdoc.css" rel="stylesheet">
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+ <script type="text/javascript">
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+ var rdoc_rel_prefix = "../../../";
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+ </script>
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+
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+ <script src="../../../js/jquery.js"></script>
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+ <script src="../../../js/navigation.js"></script>
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+ <script src="../../../js/search_index.js"></script>
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+ <script src="../../../js/search.js"></script>
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+ <script src="../../../js/searcher.js"></script>
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+ <script src="../../../js/darkfish.js"></script>
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+ <body id="top" role="document" class="file">
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+ <nav role="navigation">
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+ <div id="project-navigation">
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+ <div id="home-section" role="region" title="Quick navigation" class="nav-section">
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+ <h2>
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+ <a href="../../../index.html" rel="home">Home</a>
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+ </h2>
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+ <div id="table-of-contents-navigation">
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+ <a href="../../../table_of_contents.html#pages">Pages</a>
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+ <a href="../../../table_of_contents.html#classes">Classes</a>
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+ <a href="../../../table_of_contents.html#methods">Methods</a>
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+ </div>
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+ </div>
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+ <div id="search-section" role="search" class="project-section initially-hidden">
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+ <form action="#" method="get" accept-charset="utf-8">
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+ <div id="search-field-wrapper">
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+ <input id="search-field" role="combobox" aria-label="Search"
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+ aria-autocomplete="list" aria-controls="search-results"
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+ type="text" name="search" placeholder="Search" spellcheck="false"
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+ title="Type to search, Up and Down to navigate, Enter to load">
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+ </div>
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+
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+ <ul id="search-results" aria-label="Search Results"
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+ aria-busy="false" aria-expanded="false"
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+ aria-atomic="false" class="initially-hidden"></ul>
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+ </form>
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+ </div>
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+ </div>
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+ <div id="project-metadata">
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+ <div id="fileindex-section" class="nav-section">
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+ <h3>Pages</h3>
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+
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+ <ul class="link-list">
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+ <li><a href="../../../Gemfile.html">Gemfile</a>
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+ <li><a href="../../../Gemfile_lock.html">Gemfile.lock</a>
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+ <li><a href="../../../Guardfile.html">Guardfile</a>
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+ <li><a href="../../../Rakefile.html">Rakefile</a>
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+ <li><a href="../../../doc/ControllerPoint_html.html">ControllerPoint.html</a>
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+ <li><a href="../../../doc/CuteA_html.html">CuteA.html</a>
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+ <li><a href="../../../doc/CuteB_html.html">CuteB.html</a>
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+ <li><a href="../../../doc/DSL_html.html">DSL.html</a>
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+ <li><a href="../../../doc/NEAT_html.html">NEAT.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes_html.html">BasicNeuronTypes.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html">BiasNeuron.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html">CosineNeuron.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes/InputNeuron_html.html">InputNeuron.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html">SigmoidNeuron.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes/SineNeuron_html.html">SineNeuron.html</a>
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+ <li><a href="../../../doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html">TanhNeuron.html</a>
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+ <li><a href="../../../doc/NEAT/Controller_html.html">Controller.html</a>
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+ <li><a href="../../../doc/NEAT/Controller/NeatSettings_html.html">NeatSettings.html</a>
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+ <li><a href="../../../doc/NEAT/Critter_html.html">Critter.html</a>
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+ <li><a href="../../../doc/NEAT/Critter/Genotype_html.html">Genotype.html</a>
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+ <li><a href="../../../doc/NEAT/Critter/Genotype/Gene_html.html">Gene.html</a>
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+ <li><a href="../../../doc/NEAT/Critter/Phenotype_html.html">Phenotype.html</a>
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+ <li><a href="../../../doc/NEAT/Evaluator_html.html">Evaluator.html</a>
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+ <li><a href="../../../doc/NEAT/Evolver/CritterOp_html.html">CritterOp.html</a>
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+ <li><a href="../../../doc/NEAT/Expressor_html.html">Expressor.html</a>
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+ <li><a href="../../../doc/NEAT/Graph_html.html">Graph.html</a>
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+ <li><a href="../../../doc/NEAT/Graph/DependencyResolver_html.html">DependencyResolver.html</a>
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+ <li><a href="../../../doc/NEAT/Graph/GraphException_html.html">GraphException.html</a>
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+ <li><a href="../../../doc/NEAT/NeatException_html.html">NeatException.html</a>
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+ <li><a href="../../../doc/NEAT/NeatOb_html.html">NeatOb.html</a>
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+ <li><a href="../../../doc/NEAT/Neuron_html.html">Neuron.html</a>
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+ <li><a href="../../../doc/NEAT/Operator_html.html">Operator.html</a>
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+ <li><a href="../../../doc/NEAT/Population_html.html">Population.html</a>
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+ <li><a href="../../../doc/NEAT/Trait_html.html">Trait.html</a>
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+ <li><a href="../../../doc/_index_html.html">_index.html</a>
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+ <li><a href="../../../doc/class_list_html.html">class_list.html</a>
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+ <li><a href="../../../doc/css/common_css.html">common.css</a>
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+ <li><a href="../../../doc/css/full_list_css.html">full_list.css</a>
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+ <li><a href="../../../doc/css/style_css.html">style.css</a>
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+ &lt;span class=&#39;title&#39;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../../NEAT.html&quot; title=&quot;NEAT (module)&quot;&gt;NEAT&lt;/a&gt;&lt;/span&gt;&lt;/span&gt; &amp;raquo; &lt;span class=&#39;title&#39;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../BasicNeuronTypes.html&quot; title=&quot;NEAT::BasicNeuronTypes (module)&quot;&gt;BasicNeuronTypes&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
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+ &amp;raquo;
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+ &lt;span class=&quot;title&quot;&gt;InputNeuron&lt;/span&gt;
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+ &lt;div class=&quot;noframes&quot;&gt;&lt;span class=&quot;title&quot;&gt;(&lt;/span&gt;&lt;a href=&quot;.&quot; target=&quot;_top&quot;&gt;no frames&lt;/a&gt;&lt;span class=&quot;title&quot;&gt;)&lt;/span&gt;&lt;/div&gt;</pre>
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+ Class List
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+ href=&quot;../../method_list.html&quot;&gt;
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+ Method List
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+ &lt;/a&gt;
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+ href=&quot;../../file_list.html&quot;&gt;
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+ File List
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+ &lt;/a&gt;</pre>
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+ <p>&lt;/div&gt;</p>
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+ <pre> &lt;div class=&quot;clear&quot;&gt;&lt;/div&gt;
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+ &lt;/div&gt;
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+
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+ &lt;iframe id=&quot;search_frame&quot;&gt;&lt;/iframe&gt;
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+
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+ &lt;div id=&quot;content&quot;&gt;&lt;h1&gt;Class: NEAT::BasicNeuronTypes::InputNeuron</pre>
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+
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+ <p>&lt;/h1&gt;</p>
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+
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+ <p>&lt;dl class=“box”&gt;</p>
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+
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+ <pre>&lt;dt class=&quot;r1&quot;&gt;Inherits:&lt;/dt&gt;
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+ &lt;dd class=&quot;r1&quot;&gt;
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+ &lt;span class=&quot;inheritName&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html&quot; title=&quot;NEAT::Neuron (class)&quot;&gt;Neuron&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
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+
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+ &lt;ul class=&quot;fullTree&quot;&gt;
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+ &lt;li&gt;Object&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html&quot; title=&quot;NEAT::Neuron (class)&quot;&gt;Neuron&lt;/a&gt;&lt;/span&gt;&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;NEAT::BasicNeuronTypes::InputNeuron&lt;/li&gt;
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+
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+ &lt;/ul&gt;
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+ &lt;a href=&quot;#&quot; class=&quot;inheritanceTree&quot;&gt;show all&lt;/a&gt;
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+
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+ &lt;/dd&gt;
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+
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+ &lt;dt class=&quot;r2 last&quot;&gt;Defined in:&lt;/dt&gt;
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+ &lt;dd class=&quot;r2 last&quot;&gt;lib/rubyneat/neuron.rb&lt;/dd&gt;</pre>
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+
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+ <p>&lt;/dl&gt; &lt;div class=“clear”&gt;&lt;/div&gt;</p>
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+
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+ <p>&lt;h2&gt;Overview&lt;/h2&gt;&lt;div class=“docstring”&gt;</p>
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+
282
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
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+
284
+ <p>&lt;h1
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+ id=“label-Special+class+of+Neuron+that+takes+input+from+the+%22real+world%22”&gt;Special
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+ class of Neuron that takes input from the “real world”&lt;/h1&gt;</p>
287
+
288
+ <p>&lt;p&gt;Name of this neuron equates to the parameter name of the
289
+ input.&lt;/p&gt;</p>
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+
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+ <p>&lt;p&gt;All inputs are handled with this neuron. This type of neuron only
292
+ has one input – from the outside world.&lt;/p&gt;</p>
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+
294
+ <pre>&lt;/div&gt;</pre>
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+
296
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
298
+ <p>&lt;/div&gt;&lt;div id=“subclasses”&gt;</p>
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+
300
+ <pre>&lt;h2&gt;Direct Known Subclasses&lt;/h2&gt;
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+ &lt;p class=&quot;children&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;BiasNeuron.html&quot; title=&quot;NEAT::BasicNeuronTypes::BiasNeuron (class)&quot;&gt;BiasNeuron&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</pre>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre class="ruby"><span class="ruby-operator">&lt;</span><span class="ruby-identifier">h2</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">Instance</span> <span class="ruby-constant">Attribute</span> <span class="ruby-constant">Summary</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/h2&gt;
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+
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+ &lt;h3 class=&quot;inherited&quot;&gt;Attributes inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">Neuron</span>.<span class="ruby-identifier">html</span><span class="ruby-string">&quot; title=&quot;</span><span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-constant">Neuron</span> (<span class="ruby-identifier">class</span>)<span class="ruby-string">&quot;&gt;Neuron&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
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+ &lt;p class=&quot;</span><span class="ruby-identifier">inherited</span><span class="ruby-string">&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;</span><span class="ruby-operator">..</span><span class="ruby-node">/Neuron.html#genotype-instance_method&quot; title=&quot;NEAT::Neuron#genotype (method)&quot;&gt;#genotype&lt;/</span><span class="ruby-identifier">a</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">Neuron</span>.<span class="ruby-identifier">html</span><span class="ruby-comment">#heirarchy_number-instance_method&quot; title=&quot;NEAT::Neuron#heirarchy_number (method)&quot;&gt;#heirarchy_number&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html#output-instance_method&quot; title=&quot;NEAT::Neuron#output (method)&quot;&gt;#output&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html#trait-instance_method&quot; title=&quot;NEAT::Neuron#trait (method)&quot;&gt;#trait&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</span>
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+
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+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">h3</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&quot;inherited&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">Attributes</span> <span class="ruby-identifier">inherited</span> <span class="ruby-identifier">from</span> <span class="ruby-operator">&lt;</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&#39;object_link&#39;</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-string">&quot;../NeatOb.html&quot;</span> <span class="ruby-identifier">title</span>=<span class="ruby-string">&quot;NEAT::NeatOb (class)&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">NeatOb</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/a&gt;&lt;/s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/h3&gt;
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+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">NeatOb</span>.<span class="ruby-identifier">html</span><span class="ruby-comment">#controller-instance_method&quot; title=&quot;NEAT::NeatOb#controller (method)&quot;&gt;#controller&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NeatOb.html#name-instance_method&quot; title=&quot;NEAT::NeatOb#name (method)&quot;&gt;#name&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</span>
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+
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+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">h2</span><span class="ruby-operator">&gt;</span>
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+ <span class="ruby-constant">Class</span> <span class="ruby-constant">Method</span> <span class="ruby-constant">Summary</span>
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+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">small</span><span class="ruby-operator">&gt;</span>(<span class="ruby-operator">&lt;</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-node">&quot;#&quot;</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&quot;summary_toggle&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-identifier">collapse</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/a&gt;)&lt;/sm</span><span class="ruby-identifier">all</span><span class="ruby-operator">&gt;</span>
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+ <span class="ruby-operator">&lt;</span><span class="ruby-node">/h2&gt;
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+
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+ &lt;ul class=&quot;summary&quot;&gt;
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+
320
+ &lt;li class=&quot;public &quot;&gt;
321
+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
323
+ &lt;a href=&quot;#input%3F-class_method&quot; title=&quot;input? (class method)&quot;&gt;+ (Boolean) &lt;strong&gt;input?&lt;/s</span><span class="ruby-identifier">trong</span><span class="ruby-operator">&gt;</span> <span class="ruby-operator">&lt;</span><span class="ruby-regexp">/a&gt;
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+
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+ &lt;/s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">&gt;</span>
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+
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+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&quot;summary_desc&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-identifier">div</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&#39;inline&#39;</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/div&gt;&lt;/s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">&gt;</span>
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+ </pre>
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+
330
+ <p>&lt;/li&gt;</p>
331
+
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+ <pre> &lt;/ul&gt;
333
+
334
+ &lt;h2&gt;
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+ Instance Method Summary
336
+ &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;
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+ &lt;/h2&gt;
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+
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+ &lt;ul class=&quot;summary&quot;&gt;
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+
341
+ &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
344
+ &lt;a href=&quot;#express-instance_method&quot; title=&quot;#express (instance method)&quot;&gt;- (Object) &lt;strong&gt;express&lt;/strong&gt;(instance) &lt;/a&gt;
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+
346
+ &lt;/span&gt;
347
+
348
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
349
+
350
+ <p>&lt;p&gt;Takes a single input and passes it as is.&lt;/p&gt;
351
+ &lt;/div&gt;&lt;/span&gt;</p>
352
+
353
+ <p>&lt;/li&gt;</p>
354
+
355
+ <pre class="ruby"> <span class="ruby-operator">&lt;</span><span class="ruby-regexp">/ul&gt;
356
+
357
+ &lt;h3 class=&quot;inherited&quot;&gt;Methods inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">Neuron</span>.<span class="ruby-identifier">html</span><span class="ruby-string">&quot; title=&quot;</span><span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-constant">Neuron</span> (<span class="ruby-identifier">class</span>)<span class="ruby-string">&quot;&gt;Neuron&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
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+ &lt;p class=&quot;</span><span class="ruby-identifier">inherited</span><span class="ruby-string">&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;</span><span class="ruby-operator">..</span><span class="ruby-node">/Neuron.html#bias%3F-instance_method&quot; title=&quot;NEAT::Neuron#bias? (method)&quot;&gt;#bias?&lt;/</span><span class="ruby-identifier">a</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">Neuron</span>.<span class="ruby-identifier">html</span><span class="ruby-comment">#bias%3F-class_method&quot; title=&quot;NEAT::Neuron.bias? (method)&quot;&gt;bias?&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html#inherited-class_method&quot; title=&quot;NEAT::Neuron.inherited (method)&quot;&gt;inherited&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html#input%3F-instance_method&quot; title=&quot;NEAT::Neuron#input? (method)&quot;&gt;#input?&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html#neuron_types-class_method&quot; title=&quot;NEAT::Neuron.neuron_types (method)&quot;&gt;neuron_types&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Neuron.html#output%3F-instance_method&quot; title=&quot;NEAT::Neuron#output? (method)&quot;&gt;#output?&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</span>
359
+
360
+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">h3</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&quot;inherited&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">Methods</span> <span class="ruby-identifier">included</span> <span class="ruby-identifier">from</span> <span class="ruby-operator">&lt;</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&#39;object_link&#39;</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-string">&quot;../Graph.html&quot;</span> <span class="ruby-identifier">title</span>=<span class="ruby-string">&quot;NEAT::Graph (module)&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">Graph</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/a&gt;&lt;/s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/h3&gt;
361
+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">Graph</span>.<span class="ruby-identifier">html</span><span class="ruby-comment">#%3C%3C-instance_method&quot; title=&quot;NEAT::Graph#&amp;lt;&amp;lt; (method)&quot;&gt;#&lt;&lt;&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Graph.html#add-instance_method&quot; title=&quot;NEAT::Graph#add (method)&quot;&gt;#add&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Graph.html#clear_graph-instance_method&quot; title=&quot;NEAT::Graph#clear_graph (method)&quot;&gt;#clear_graph&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../Graph.html#inputs-instance_method&quot; title=&quot;NEAT::Graph#inputs (method)&quot;&gt;#inputs&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</span>
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+
363
+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">h3</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&quot;inherited&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">Methods</span> <span class="ruby-identifier">inherited</span> <span class="ruby-identifier">from</span> <span class="ruby-operator">&lt;</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&#39;object_link&#39;</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-string">&quot;../NeatOb.html&quot;</span> <span class="ruby-identifier">title</span>=<span class="ruby-string">&quot;NEAT::NeatOb (class)&quot;</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">NeatOb</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/a&gt;&lt;/s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">&gt;</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/h3&gt;
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+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">NeatOb</span>.<span class="ruby-identifier">html</span><span class="ruby-comment">#initialize-instance_method&quot; title=&quot;NEAT::NeatOb#initialize (method)&quot;&gt;#initialize&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NeatOb.html#log-instance_method&quot; title=&quot;NEAT::NeatOb#log (method)&quot;&gt;#log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NeatOb.html#log-class_method&quot; title=&quot;NEAT::NeatOb.log (method)&quot;&gt;log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NeatOb.html#to_s-instance_method&quot; title=&quot;NEAT::NeatOb#to_s (method)&quot;&gt;#to_s&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</span>
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+
366
+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">div</span> <span class="ruby-identifier">id</span>=<span class="ruby-string">&quot;constructor_details&quot;</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">&quot;method_details_list&quot;</span><span class="ruby-operator">&gt;</span>
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+ <span class="ruby-operator">&lt;</span><span class="ruby-identifier">h2</span><span class="ruby-operator">&gt;</span><span class="ruby-constant">Constructor</span> <span class="ruby-constant">Details</span><span class="ruby-operator">&lt;</span><span class="ruby-regexp">/h2&gt;
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+
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+ &lt;p class=&quot;notice&quot;&gt;This class inherits a constructor from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../</span><span class="ruby-constant">NeatOb</span>.<span class="ruby-identifier">html</span><span class="ruby-comment">#initialize-instance_method&quot; title=&quot;NEAT::NeatOb#initialize (method)&quot;&gt;NEAT::NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</span>
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+ </pre>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre>&lt;div id=&quot;class_method_details&quot; class=&quot;method_details_list&quot;&gt;
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+ &lt;h2&gt;Class Method Details&lt;/h2&gt;
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+
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+ &lt;div class=&quot;method_details first&quot;&gt;
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+ &lt;h3 class=&quot;signature first&quot; id=&quot;input?-class_method&quot;&gt;
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+
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+ + (&lt;tt&gt;Boolean&lt;/tt&gt;) &lt;strong&gt;input?&lt;/strong&gt;</pre>
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+
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+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
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+
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+ <pre>&lt;div class=&quot;discussion&quot;&gt;
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+
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+ &lt;/div&gt;</pre>
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+
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+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
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+ <p>&lt;p class=“tag_title”&gt;Returns:&lt;/p&gt; &lt;ul class=“return”&gt;</p>
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+
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+ <pre>&lt;li&gt;
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+
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+ &lt;span class=&#39;type&#39;&gt;(&lt;tt&gt;Boolean&lt;/tt&gt;)&lt;/span&gt;
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+
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+ &lt;/li&gt;</pre>
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+
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+ <p>&lt;/ul&gt;</p>
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+
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+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
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+
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+ <pre>&lt;tr&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;lines&quot;&gt;</pre>
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+
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+ <p>76&lt;/pre&gt;</p>
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+
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+ <pre>&lt;/td&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/neuron.rb&#39;, line 76&lt;/span&gt;</pre>
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+
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+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span
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+ class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span
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+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
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+ rubyid_input?&#39;&gt;input?&lt;/span&gt; &lt;span
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+ class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
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+ class=&#39;kw&#39;&gt;true&lt;/span&gt; &lt;span
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+ class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
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+ class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
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+
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+ <pre> &lt;/td&gt;
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+ &lt;/tr&gt;</pre>
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+
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+ <p>&lt;/table&gt; &lt;/div&gt;</p>
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+
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+ <pre>&lt;/div&gt;
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+
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+ &lt;div id=&quot;instance_method_details&quot; class=&quot;method_details_list&quot;&gt;
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+ &lt;h2&gt;Instance Method Details&lt;/h2&gt;
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+
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+ &lt;div class=&quot;method_details first&quot;&gt;
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+ &lt;h3 class=&quot;signature first&quot; id=&quot;express-instance_method&quot;&gt;
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+
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+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;express&lt;/strong&gt;(instance)</pre>
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+
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+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
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+
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+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
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+
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+ <p>&lt;p&gt;Takes a single input and passes it as is.&lt;/p&gt;</p>
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+
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+ <pre>&lt;/div&gt;</pre>
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+
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+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
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+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
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+
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+ <pre>&lt;tr&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;lines&quot;&gt;</pre>
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+
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+ <p>79 80 81 82 83&lt;/pre&gt;</p>
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+
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+ <pre>&lt;/td&gt;
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+ &lt;td&gt;
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+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/neuron.rb&#39;, line 79&lt;/span&gt;</pre>
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+
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+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
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+ identifier rubyid_express&#39;&gt;express&lt;/span&gt;&lt;span
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+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
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+ rubyid_instance&#39;&gt;instance&lt;/span&gt;&lt;span
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+ class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
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+
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+ <pre>&lt;span class=&#39;id identifier rubyid_instance&#39;&gt;instance&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_define_singleton_method&#39;&gt;define_singleton_method&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;ivar&#39;&gt;@name&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span class=&#39;lbrace&#39;&gt;{&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_input&#39;&gt;input&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
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+ &lt;span class=&#39;id identifier rubyid_input&#39;&gt;input&lt;/span&gt;
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+ &lt;span class=&#39;rbrace&#39;&gt;}&lt;/span&gt;</pre>
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+
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+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
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+
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+ <pre> &lt;/td&gt;
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+ &lt;/tr&gt;</pre>
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+
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+ <p>&lt;/table&gt; &lt;/div&gt;</p>
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+
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+ <pre>&lt;/div&gt;</pre>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre> &lt;div id=&quot;footer&quot;&gt;
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+ Generated on Sun Mar 16 16:36:51 2014 by
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+ &lt;a href=&quot;http://yardoc.org&quot; title=&quot;Yay! A Ruby Documentation Tool&quot; target=&quot;_parent&quot;&gt;yard&lt;/a&gt;
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+ 0.8.7.3 (ruby-2.1.1).</pre>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre>&lt;/body&gt;</pre>
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+
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+ <p>&lt;/html&gt;</p>
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+ </main>
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+
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+
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+
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+ <footer id="validator-badges" role="contentinfo">
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+ <p><a href="http://validator.w3.org/check/referer">Validate</a>
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+ <p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
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+ <p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
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+ </footer>
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+