rubyneat 0.3.5.alpha.2
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +7 -0
- data/.directory +4 -0
- data/.gitignore.orig +20 -0
- data/.idea/.name +1 -0
- data/.idea/.rakeTasks +7 -0
- data/.idea/dictionaries/trader.xml +3 -0
- data/.idea/encodings.xml +5 -0
- data/.idea/misc.xml +5 -0
- data/.idea/modules.xml +9 -0
- data/.idea/rubyneat.iml +197 -0
- data/.idea/runConfigurations/invpend_neat.xml +26 -0
- data/.idea/runConfigurations/sigdebug_neat.xml +24 -0
- data/.idea/runConfigurations/xor_neat.xml +26 -0
- data/.idea/runConfigurations/xordebug_neat.xml +24 -0
- data/.idea/runConfigurations/xorsin_neat.xml +24 -0
- data/.idea/scopes/scope_settings.xml +5 -0
- data/.idea/vcs.xml +7 -0
- data/.idea/workspace.xml +1124 -0
- data/.semver +5 -0
- data/.yardoc/checksums +11 -0
- data/.yardoc/object_types +0 -0
- data/.yardoc/objects/root.dat +0 -0
- data/.yardoc/proxy_types +0 -0
- data/Gemfile +32 -0
- data/Gemfile.lock +135 -0
- data/Gemfile.lock.orig +147 -0
- data/Guardfile +8 -0
- data/Rakefile +61 -0
- data/bin/neat +83 -0
- data/config/application.rb +5 -0
- data/doc/ControllerPoint.html +125 -0
- data/doc/CuteA.html +286 -0
- data/doc/CuteB.html +297 -0
- data/doc/DSL.html +883 -0
- data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +518 -0
- data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +274 -0
- data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +366 -0
- data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +275 -0
- data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +274 -0
- data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +274 -0
- data/doc/NEAT/BasicNeuronTypes.html +136 -0
- data/doc/NEAT/Controller/NeatSettings.html +3985 -0
- data/doc/NEAT/Controller.html +2490 -0
- data/doc/NEAT/Critter/Genotype/Gene.html +979 -0
- data/doc/NEAT/Critter/Genotype.html +1601 -0
- data/doc/NEAT/Critter/Phenotype.html +603 -0
- data/doc/NEAT/Critter.html +1037 -0
- data/doc/NEAT/DSL.html +1255 -0
- data/doc/NEAT/Evaluator.html +420 -0
- data/doc/NEAT/Evolver/CritterOp.html +551 -0
- data/doc/NEAT/Evolver.html +602 -0
- data/doc/NEAT/Expressor.html +327 -0
- data/doc/NEAT/Graph/DependencyResolver.html +478 -0
- data/doc/NEAT/Graph/GraphException.html +123 -0
- data/doc/NEAT/Graph.html +402 -0
- data/doc/NEAT/NeatException.html +123 -0
- data/doc/NEAT/NeatOb.html +567 -0
- data/doc/NEAT/Neuron.html +1067 -0
- data/doc/NEAT/Operator.html +162 -0
- data/doc/NEAT/Population.html +1961 -0
- data/doc/NEAT/Trait.html +169 -0
- data/doc/NEAT.html +588 -0
- data/doc/_index.html +373 -0
- data/doc/class_list.html +54 -0
- data/doc/css/common.css +1 -0
- data/doc/css/full_list.css +57 -0
- data/doc/css/style.css +339 -0
- data/doc/file_list.html +53 -0
- data/doc/frames.html +26 -0
- data/doc/index.html +373 -0
- data/doc/js/app.js +219 -0
- data/doc/js/full_list.js +178 -0
- data/doc/js/jquery.js +4 -0
- data/doc/method_list.html +1415 -0
- data/doc/top-level-namespace.html +164 -0
- data/foo/foo_aquarium_example.rb +38 -0
- data/foo/foo_gosu.rb +99 -0
- data/foo/foo_rubygoo.rb +104 -0
- data/foo/foo_sdl.rb +34 -0
- data/foo/icon.png +0 -0
- data/lib/rubyneat/critter.rb +374 -0
- data/lib/rubyneat/default_neat.rb +10 -0
- data/lib/rubyneat/dsl.rb +130 -0
- data/lib/rubyneat/evaluator.rb +51 -0
- data/lib/rubyneat/evolver.rb +315 -0
- data/lib/rubyneat/expressor.rb +110 -0
- data/lib/rubyneat/graph.rb +95 -0
- data/lib/rubyneat/neuron.rb +152 -0
- data/lib/rubyneat/population.rb +227 -0
- data/lib/rubyneat/rubyneat.rb +429 -0
- data/lib/rubyneat.rb +8 -0
- data/neater/invpend_neat.rb +150 -0
- data/neater/rnlib/inverted_pendulum.rb +380 -0
- data/neater/rnlib/xor.rb +10 -0
- data/neater/sigdebug_neat.rb +136 -0
- data/neater/xor_neat.rb +137 -0
- data/neater/xoranalog_neat.rb +138 -0
- data/neater/xorsin_neat.rb +143 -0
- data/projectFilesBackup/.idea/rubyneat.iml +180 -0
- data/public/.directory +4 -0
- data/public/background.png +0 -0
- data/public/background.xcf +0 -0
- data/public/cart.png +0 -0
- data/public/cart.xcf +0 -0
- data/public/metalpoles_molton_ball_l.jpg +0 -0
- data/public/old_background.png +0 -0
- data/public/pointer.png +0 -0
- data/public/pointer.xcf +0 -0
- data/public/pole.kra +0 -0
- data/public/pole.png +0 -0
- data/public/pole.xcf +0 -0
- data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
- data/public/wheel.png +0 -0
- data/public/wheel.xcf +0 -0
- data/public/wood-planks-texture.jpg +0 -0
- data/rdoc/ControllerPoint.html +116 -0
- data/rdoc/CuteA.html +177 -0
- data/rdoc/CuteB.html +178 -0
- data/rdoc/DSLSetup.html +177 -0
- data/rdoc/GameTestWindow.html +242 -0
- data/rdoc/GameWindow.html +292 -0
- data/rdoc/Gemfile.html +215 -0
- data/rdoc/Gemfile_lock.html +327 -0
- data/rdoc/GraphTest.html +210 -0
- data/rdoc/Guardfile.html +198 -0
- data/rdoc/InvertedPendulum/Cart.html +668 -0
- data/rdoc/InvertedPendulum/DSL.html +259 -0
- data/rdoc/InvertedPendulum/InvPendWindow.html +402 -0
- data/rdoc/InvertedPendulum.html +198 -0
- data/rdoc/Logger.html +98 -0
- data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +265 -0
- data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +162 -0
- data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +206 -0
- data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +162 -0
- data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +162 -0
- data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +161 -0
- data/rdoc/NEAT/BasicNeuronTypes.html +107 -0
- data/rdoc/NEAT/Controller/NeatSettings.html +880 -0
- data/rdoc/NEAT/Controller.html +729 -0
- data/rdoc/NEAT/Critter/Genotype/Gene.html +457 -0
- data/rdoc/NEAT/Critter/Genotype.html +735 -0
- data/rdoc/NEAT/Critter/Phenotype.html +330 -0
- data/rdoc/NEAT/Critter.html +489 -0
- data/rdoc/NEAT/DSL.html +729 -0
- data/rdoc/NEAT/Evaluator.html +256 -0
- data/rdoc/NEAT/Evolver/CritterOp.html +349 -0
- data/rdoc/NEAT/Evolver.html +891 -0
- data/rdoc/NEAT/Expressor.html +402 -0
- data/rdoc/NEAT/Graph/DependencyResolver.html +291 -0
- data/rdoc/NEAT/Graph/GraphException.html +105 -0
- data/rdoc/NEAT/Graph.html +263 -0
- data/rdoc/NEAT/NeatException.html +105 -0
- data/rdoc/NEAT/NeatOb.html +325 -0
- data/rdoc/NEAT/Neuron.html +481 -0
- data/rdoc/NEAT/Operator.html +109 -0
- data/rdoc/NEAT/Population.html +935 -0
- data/rdoc/NEAT/Trait.html +117 -0
- data/rdoc/NEAT.html +422 -0
- data/rdoc/Object.html +384 -0
- data/rdoc/Phi.html +98 -0
- data/rdoc/Player.html +383 -0
- data/rdoc/Rakefile.html +254 -0
- data/rdoc/RubyNEAT/Application.html +105 -0
- data/rdoc/RubyNEAT.html +98 -0
- data/rdoc/SDL/Event2.html +98 -0
- data/rdoc/SDL.html +98 -0
- data/rdoc/Vector.html +195 -0
- data/rdoc/created.rid +125 -0
- data/rdoc/doc/ControllerPoint_html.html +299 -0
- data/rdoc/doc/CuteA_html.html +438 -0
- data/rdoc/doc/CuteB_html.html +436 -0
- data/rdoc/doc/DSL_html.html +992 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +617 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +413 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +498 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +413 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +413 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +412 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +310 -0
- data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +3324 -0
- data/rdoc/doc/NEAT/Controller_html.html +2212 -0
- data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +997 -0
- data/rdoc/doc/NEAT/Critter/Genotype_html.html +1556 -0
- data/rdoc/doc/NEAT/Critter/Phenotype_html.html +687 -0
- data/rdoc/doc/NEAT/Critter_html.html +1037 -0
- data/rdoc/doc/NEAT/DSL_html.html +1349 -0
- data/rdoc/doc/NEAT/Evaluator_html.html +556 -0
- data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +690 -0
- data/rdoc/doc/NEAT/Evolver_html.html +677 -0
- data/rdoc/doc/NEAT/Expressor_html.html +468 -0
- data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +598 -0
- data/rdoc/doc/NEAT/Graph/GraphException_html.html +299 -0
- data/rdoc/doc/NEAT/Graph_html.html +527 -0
- data/rdoc/doc/NEAT/NeatException_html.html +299 -0
- data/rdoc/doc/NEAT/NeatOb_html.html +671 -0
- data/rdoc/doc/NEAT/Neuron_html.html +1095 -0
- data/rdoc/doc/NEAT/Operator_html.html +337 -0
- data/rdoc/doc/NEAT/Population_html.html +1795 -0
- data/rdoc/doc/NEAT/Trait_html.html +344 -0
- data/rdoc/doc/NEAT_html.html +736 -0
- data/rdoc/doc/_index_html.html +559 -0
- data/rdoc/doc/class_list_html.html +369 -0
- data/rdoc/doc/css/common_css.html +188 -0
- data/rdoc/doc/css/full_list_css.html +243 -0
- data/rdoc/doc/css/style_css.html +530 -0
- data/rdoc/doc/file_list_html.html +240 -0
- data/rdoc/doc/frames_html.html +217 -0
- data/rdoc/doc/index_html.html +559 -0
- data/rdoc/doc/js/app_js.html +423 -0
- data/rdoc/doc/js/full_list_js.html +372 -0
- data/rdoc/doc/js/jquery_js.html +1536 -0
- data/rdoc/doc/method_list_html.html +1375 -0
- data/rdoc/doc/top-level-namespace_html.html +317 -0
- data/rdoc/fonts/Lato-Light.ttf +0 -0
- data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
- data/rdoc/fonts/Lato-Regular.ttf +0 -0
- data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
- data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
- data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
- data/rdoc/fonts.css +167 -0
- data/rdoc/images/add.png +0 -0
- data/rdoc/images/arrow_up.png +0 -0
- data/rdoc/images/brick.png +0 -0
- data/rdoc/images/brick_link.png +0 -0
- data/rdoc/images/bug.png +0 -0
- data/rdoc/images/bullet_black.png +0 -0
- data/rdoc/images/bullet_toggle_minus.png +0 -0
- data/rdoc/images/bullet_toggle_plus.png +0 -0
- data/rdoc/images/date.png +0 -0
- data/rdoc/images/delete.png +0 -0
- data/rdoc/images/find.png +0 -0
- data/rdoc/images/loadingAnimation.gif +0 -0
- data/rdoc/images/macFFBgHack.png +0 -0
- data/rdoc/images/package.png +0 -0
- data/rdoc/images/page_green.png +0 -0
- data/rdoc/images/page_white_text.png +0 -0
- data/rdoc/images/page_white_width.png +0 -0
- data/rdoc/images/plugin.png +0 -0
- data/rdoc/images/ruby.png +0 -0
- data/rdoc/images/tag_blue.png +0 -0
- data/rdoc/images/tag_green.png +0 -0
- data/rdoc/images/transparent.png +0 -0
- data/rdoc/images/wrench.png +0 -0
- data/rdoc/images/wrench_orange.png +0 -0
- data/rdoc/images/zoom.png +0 -0
- data/rdoc/index.html +282 -0
- data/rdoc/js/darkfish.js +140 -0
- data/rdoc/js/jquery.js +18 -0
- data/rdoc/js/navigation.js +142 -0
- data/rdoc/js/search.js +109 -0
- data/rdoc/js/search_index.js +1 -0
- data/rdoc/js/searcher.js +228 -0
- data/rdoc/rdoc.css +580 -0
- data/rdoc/rubyneat_gemspec.html +387 -0
- data/rdoc/table_of_contents.html +2502 -0
- data/rdoc/xordebug_log.html +170598 -0
- data/rdoc/xorsin_log.html +22569 -0
- data/rubyneat.gemspec +347 -0
- data/rubyneat.gemspec.orig +375 -0
- data/spec/lib/rubyneat/rubyneat_spec.rb +132 -0
- metadata +555 -0
|
@@ -0,0 +1,1037 @@
|
|
|
1
|
+
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
|
|
2
|
+
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
3
|
+
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
|
|
4
|
+
<head>
|
|
5
|
+
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
|
|
6
|
+
<title>
|
|
7
|
+
Class: NEAT::Critter
|
|
8
|
+
|
|
9
|
+
— Documentation by YARD 0.8.7.4
|
|
10
|
+
|
|
11
|
+
</title>
|
|
12
|
+
|
|
13
|
+
<link rel="stylesheet" href="../css/style.css" type="text/css" charset="utf-8" />
|
|
14
|
+
|
|
15
|
+
<link rel="stylesheet" href="../css/common.css" type="text/css" charset="utf-8" />
|
|
16
|
+
|
|
17
|
+
<script type="text/javascript" charset="utf-8">
|
|
18
|
+
hasFrames = window.top.frames.main ? true : false;
|
|
19
|
+
relpath = '../';
|
|
20
|
+
framesUrl = "../frames.html#!NEAT/Critter.html";
|
|
21
|
+
</script>
|
|
22
|
+
|
|
23
|
+
|
|
24
|
+
<script type="text/javascript" charset="utf-8" src="../js/jquery.js"></script>
|
|
25
|
+
|
|
26
|
+
<script type="text/javascript" charset="utf-8" src="../js/app.js"></script>
|
|
27
|
+
|
|
28
|
+
|
|
29
|
+
</head>
|
|
30
|
+
<body>
|
|
31
|
+
<div id="header">
|
|
32
|
+
<div id="menu">
|
|
33
|
+
|
|
34
|
+
<a href="../_index.html">Index (C)</a> »
|
|
35
|
+
<span class='title'><span class='object_link'><a href="../NEAT.html" title="NEAT (module)">NEAT</a></span></span>
|
|
36
|
+
»
|
|
37
|
+
<span class="title">Critter</span>
|
|
38
|
+
|
|
39
|
+
|
|
40
|
+
<div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
|
|
41
|
+
</div>
|
|
42
|
+
|
|
43
|
+
<div id="search">
|
|
44
|
+
|
|
45
|
+
<a class="full_list_link" id="class_list_link"
|
|
46
|
+
href="../class_list.html">
|
|
47
|
+
Class List
|
|
48
|
+
</a>
|
|
49
|
+
|
|
50
|
+
<a class="full_list_link" id="method_list_link"
|
|
51
|
+
href="../method_list.html">
|
|
52
|
+
Method List
|
|
53
|
+
</a>
|
|
54
|
+
|
|
55
|
+
<a class="full_list_link" id="file_list_link"
|
|
56
|
+
href="../file_list.html">
|
|
57
|
+
File List
|
|
58
|
+
</a>
|
|
59
|
+
|
|
60
|
+
</div>
|
|
61
|
+
<div class="clear"></div>
|
|
62
|
+
</div>
|
|
63
|
+
|
|
64
|
+
<iframe id="search_frame"></iframe>
|
|
65
|
+
|
|
66
|
+
<div id="content"><h1>Class: NEAT::Critter
|
|
67
|
+
|
|
68
|
+
|
|
69
|
+
|
|
70
|
+
</h1>
|
|
71
|
+
|
|
72
|
+
<dl class="box">
|
|
73
|
+
|
|
74
|
+
<dt class="r1">Inherits:</dt>
|
|
75
|
+
<dd class="r1">
|
|
76
|
+
<span class="inheritName"><span class='object_link'><a href="NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></span>
|
|
77
|
+
|
|
78
|
+
<ul class="fullTree">
|
|
79
|
+
<li>Object</li>
|
|
80
|
+
|
|
81
|
+
<li class="next"><span class='object_link'><a href="NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></li>
|
|
82
|
+
|
|
83
|
+
<li class="next">NEAT::Critter</li>
|
|
84
|
+
|
|
85
|
+
</ul>
|
|
86
|
+
<a href="#" class="inheritanceTree">show all</a>
|
|
87
|
+
|
|
88
|
+
</dd>
|
|
89
|
+
|
|
90
|
+
|
|
91
|
+
|
|
92
|
+
|
|
93
|
+
|
|
94
|
+
|
|
95
|
+
|
|
96
|
+
|
|
97
|
+
|
|
98
|
+
<dt class="r2 last">Defined in:</dt>
|
|
99
|
+
<dd class="r2 last">lib/rubyneat/critter.rb</dd>
|
|
100
|
+
|
|
101
|
+
</dl>
|
|
102
|
+
<div class="clear"></div>
|
|
103
|
+
|
|
104
|
+
<h2>Overview</h2><div class="docstring">
|
|
105
|
+
<div class="discussion">
|
|
106
|
+
|
|
107
|
+
<h1 id="label-Critters+for+NEAT">Critters for NEAT</h1>
|
|
108
|
+
|
|
109
|
+
<p>The Critter class comprises a Genotype and a Phenotype. The Genotype
|
|
110
|
+
comprises Genes and Neurons.</p>
|
|
111
|
+
|
|
112
|
+
|
|
113
|
+
</div>
|
|
114
|
+
</div>
|
|
115
|
+
<div class="tags">
|
|
116
|
+
|
|
117
|
+
|
|
118
|
+
</div><h2>Defined Under Namespace</h2>
|
|
119
|
+
<p class="children">
|
|
120
|
+
|
|
121
|
+
|
|
122
|
+
|
|
123
|
+
|
|
124
|
+
<strong class="classes">Classes:</strong> <span class='object_link'><a href="Critter/Genotype.html" title="NEAT::Critter::Genotype (class)">Genotype</a></span>, <span class='object_link'><a href="Critter/Phenotype.html" title="NEAT::Critter::Phenotype (class)">Phenotype</a></span>
|
|
125
|
+
|
|
126
|
+
|
|
127
|
+
</p>
|
|
128
|
+
|
|
129
|
+
|
|
130
|
+
|
|
131
|
+
|
|
132
|
+
<h2>Instance Attribute Summary <small>(<a href="#" class="summary_toggle">collapse</a>)</small></h2>
|
|
133
|
+
<ul class="summary">
|
|
134
|
+
|
|
135
|
+
<li class="public ">
|
|
136
|
+
<span class="summary_signature">
|
|
137
|
+
|
|
138
|
+
<a href="#fitness-instance_method" title="#fitness (instance method)">- (Object) <strong>fitness</strong> </a>
|
|
139
|
+
|
|
140
|
+
|
|
141
|
+
|
|
142
|
+
</span>
|
|
143
|
+
|
|
144
|
+
|
|
145
|
+
|
|
146
|
+
|
|
147
|
+
|
|
148
|
+
|
|
149
|
+
|
|
150
|
+
|
|
151
|
+
|
|
152
|
+
|
|
153
|
+
|
|
154
|
+
|
|
155
|
+
<span class="summary_desc"><div class='inline'>
|
|
156
|
+
<p>Ratings assigned by Evaluator.</p>
|
|
157
|
+
</div></span>
|
|
158
|
+
|
|
159
|
+
</li>
|
|
160
|
+
|
|
161
|
+
|
|
162
|
+
<li class="public ">
|
|
163
|
+
<span class="summary_signature">
|
|
164
|
+
|
|
165
|
+
<a href="#genotype-instance_method" title="#genotype (instance method)">- (Object) <strong>genotype</strong> </a>
|
|
166
|
+
|
|
167
|
+
|
|
168
|
+
|
|
169
|
+
</span>
|
|
170
|
+
|
|
171
|
+
|
|
172
|
+
|
|
173
|
+
|
|
174
|
+
|
|
175
|
+
|
|
176
|
+
|
|
177
|
+
|
|
178
|
+
|
|
179
|
+
|
|
180
|
+
|
|
181
|
+
|
|
182
|
+
<span class="summary_desc"><div class='inline'>
|
|
183
|
+
<p>Returns the value of attribute genotype.</p>
|
|
184
|
+
</div></span>
|
|
185
|
+
|
|
186
|
+
</li>
|
|
187
|
+
|
|
188
|
+
|
|
189
|
+
<li class="public ">
|
|
190
|
+
<span class="summary_signature">
|
|
191
|
+
|
|
192
|
+
<a href="#novelty-instance_method" title="#novelty (instance method)">- (Object) <strong>novelty</strong> </a>
|
|
193
|
+
|
|
194
|
+
|
|
195
|
+
|
|
196
|
+
</span>
|
|
197
|
+
|
|
198
|
+
|
|
199
|
+
|
|
200
|
+
|
|
201
|
+
|
|
202
|
+
|
|
203
|
+
|
|
204
|
+
|
|
205
|
+
|
|
206
|
+
|
|
207
|
+
|
|
208
|
+
|
|
209
|
+
<span class="summary_desc"><div class='inline'>
|
|
210
|
+
<p>Ratings assigned by Evaluator.</p>
|
|
211
|
+
</div></span>
|
|
212
|
+
|
|
213
|
+
</li>
|
|
214
|
+
|
|
215
|
+
|
|
216
|
+
<li class="public ">
|
|
217
|
+
<span class="summary_signature">
|
|
218
|
+
|
|
219
|
+
<a href="#phenotype-instance_method" title="#phenotype (instance method)">- (Object) <strong>phenotype</strong> </a>
|
|
220
|
+
|
|
221
|
+
|
|
222
|
+
|
|
223
|
+
</span>
|
|
224
|
+
|
|
225
|
+
|
|
226
|
+
|
|
227
|
+
|
|
228
|
+
|
|
229
|
+
|
|
230
|
+
|
|
231
|
+
|
|
232
|
+
|
|
233
|
+
|
|
234
|
+
|
|
235
|
+
|
|
236
|
+
<span class="summary_desc"><div class='inline'>
|
|
237
|
+
<p>Returns the value of attribute phenotype.</p>
|
|
238
|
+
</div></span>
|
|
239
|
+
|
|
240
|
+
</li>
|
|
241
|
+
|
|
242
|
+
|
|
243
|
+
<li class="public ">
|
|
244
|
+
<span class="summary_signature">
|
|
245
|
+
|
|
246
|
+
<a href="#population-instance_method" title="#population (instance method)">- (Object) <strong>population</strong> </a>
|
|
247
|
+
|
|
248
|
+
|
|
249
|
+
|
|
250
|
+
</span>
|
|
251
|
+
|
|
252
|
+
|
|
253
|
+
|
|
254
|
+
|
|
255
|
+
<span class="note title readonly">readonly</span>
|
|
256
|
+
|
|
257
|
+
|
|
258
|
+
|
|
259
|
+
|
|
260
|
+
|
|
261
|
+
|
|
262
|
+
|
|
263
|
+
|
|
264
|
+
|
|
265
|
+
<span class="summary_desc"><div class='inline'>
|
|
266
|
+
<p>Returns the value of attribute population.</p>
|
|
267
|
+
</div></span>
|
|
268
|
+
|
|
269
|
+
</li>
|
|
270
|
+
|
|
271
|
+
|
|
272
|
+
</ul>
|
|
273
|
+
|
|
274
|
+
|
|
275
|
+
|
|
276
|
+
|
|
277
|
+
|
|
278
|
+
<h3 class="inherited">Attributes inherited from <span class='object_link'><a href="NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></h3>
|
|
279
|
+
<p class="inherited"><span class='object_link'><a href="NeatOb.html#controller-instance_method" title="NEAT::NeatOb#controller (method)">#controller</a></span>, <span class='object_link'><a href="NeatOb.html#name-instance_method" title="NEAT::NeatOb#name (method)">#name</a></span></p>
|
|
280
|
+
|
|
281
|
+
|
|
282
|
+
|
|
283
|
+
<h2>
|
|
284
|
+
Instance Method Summary
|
|
285
|
+
<small>(<a href="#" class="summary_toggle">collapse</a>)</small>
|
|
286
|
+
</h2>
|
|
287
|
+
|
|
288
|
+
<ul class="summary">
|
|
289
|
+
|
|
290
|
+
<li class="public ">
|
|
291
|
+
<span class="summary_signature">
|
|
292
|
+
|
|
293
|
+
<a href="#compare-instance_method" title="#compare (instance method)">- (Object) <strong>compare</strong>(oc) </a>
|
|
294
|
+
|
|
295
|
+
|
|
296
|
+
|
|
297
|
+
</span>
|
|
298
|
+
|
|
299
|
+
|
|
300
|
+
|
|
301
|
+
|
|
302
|
+
|
|
303
|
+
|
|
304
|
+
|
|
305
|
+
|
|
306
|
+
|
|
307
|
+
<span class="summary_desc"><div class='inline'>
|
|
308
|
+
<p>Compare ourselves against another critter for compability.</p>
|
|
309
|
+
</div></span>
|
|
310
|
+
|
|
311
|
+
</li>
|
|
312
|
+
|
|
313
|
+
|
|
314
|
+
<li class="public ">
|
|
315
|
+
<span class="summary_signature">
|
|
316
|
+
|
|
317
|
+
<a href="#dump_s-instance_method" title="#dump_s (instance method)">- (Object) <strong>dump_s</strong> </a>
|
|
318
|
+
|
|
319
|
+
|
|
320
|
+
|
|
321
|
+
</span>
|
|
322
|
+
|
|
323
|
+
|
|
324
|
+
|
|
325
|
+
|
|
326
|
+
|
|
327
|
+
|
|
328
|
+
|
|
329
|
+
|
|
330
|
+
|
|
331
|
+
<span class="summary_desc"><div class='inline'>
|
|
332
|
+
<p>Critter print.</p>
|
|
333
|
+
</div></span>
|
|
334
|
+
|
|
335
|
+
</li>
|
|
336
|
+
|
|
337
|
+
|
|
338
|
+
<li class="public ">
|
|
339
|
+
<span class="summary_signature">
|
|
340
|
+
|
|
341
|
+
<a href="#evaluate%21-instance_method" title="#evaluate! (instance method)">- (Object) <strong>evaluate!</strong> </a>
|
|
342
|
+
|
|
343
|
+
|
|
344
|
+
|
|
345
|
+
</span>
|
|
346
|
+
|
|
347
|
+
|
|
348
|
+
|
|
349
|
+
|
|
350
|
+
|
|
351
|
+
|
|
352
|
+
|
|
353
|
+
|
|
354
|
+
|
|
355
|
+
<span class="summary_desc"><div class='inline'>
|
|
356
|
+
<p>A single evaluation step.</p>
|
|
357
|
+
</div></span>
|
|
358
|
+
|
|
359
|
+
</li>
|
|
360
|
+
|
|
361
|
+
|
|
362
|
+
<li class="public ">
|
|
363
|
+
<span class="summary_signature">
|
|
364
|
+
|
|
365
|
+
<a href="#express%21-instance_method" title="#express! (instance method)">- (Object) <strong>express!</strong> </a>
|
|
366
|
+
|
|
367
|
+
|
|
368
|
+
|
|
369
|
+
</span>
|
|
370
|
+
|
|
371
|
+
|
|
372
|
+
|
|
373
|
+
|
|
374
|
+
|
|
375
|
+
|
|
376
|
+
|
|
377
|
+
|
|
378
|
+
|
|
379
|
+
<span class="summary_desc"><div class='inline'>
|
|
380
|
+
<p>Exoress this critter using the Expressor plugin.</p>
|
|
381
|
+
</div></span>
|
|
382
|
+
|
|
383
|
+
</li>
|
|
384
|
+
|
|
385
|
+
|
|
386
|
+
<li class="public ">
|
|
387
|
+
<span class="summary_signature">
|
|
388
|
+
|
|
389
|
+
<a href="#initialize-instance_method" title="#initialize (instance method)">- (Critter) <strong>initialize</strong>(pop, mating = false, &block) </a>
|
|
390
|
+
|
|
391
|
+
|
|
392
|
+
|
|
393
|
+
</span>
|
|
394
|
+
|
|
395
|
+
|
|
396
|
+
<span class="note title constructor">constructor</span>
|
|
397
|
+
|
|
398
|
+
|
|
399
|
+
|
|
400
|
+
|
|
401
|
+
|
|
402
|
+
|
|
403
|
+
|
|
404
|
+
|
|
405
|
+
<span class="summary_desc"><div class='inline'>
|
|
406
|
+
<p>Critter construction.</p>
|
|
407
|
+
</div></span>
|
|
408
|
+
|
|
409
|
+
</li>
|
|
410
|
+
|
|
411
|
+
|
|
412
|
+
<li class="public ">
|
|
413
|
+
<span class="summary_signature">
|
|
414
|
+
|
|
415
|
+
<a href="#initialize_neurons%21-instance_method" title="#initialize_neurons! (instance method)">- (Object) <strong>initialize_neurons!</strong> </a>
|
|
416
|
+
|
|
417
|
+
|
|
418
|
+
|
|
419
|
+
</span>
|
|
420
|
+
|
|
421
|
+
|
|
422
|
+
|
|
423
|
+
|
|
424
|
+
|
|
425
|
+
|
|
426
|
+
|
|
427
|
+
|
|
428
|
+
|
|
429
|
+
<span class="summary_desc"><div class='inline'>
|
|
430
|
+
<p>This initializes neurons in preparation for recurrence.</p>
|
|
431
|
+
</div></span>
|
|
432
|
+
|
|
433
|
+
</li>
|
|
434
|
+
|
|
435
|
+
|
|
436
|
+
<li class="public ">
|
|
437
|
+
<span class="summary_signature">
|
|
438
|
+
|
|
439
|
+
<a href="#ready_for_expression%21-instance_method" title="#ready_for_expression! (instance method)">- (Object) <strong>ready_for_expression!</strong> </a>
|
|
440
|
+
|
|
441
|
+
|
|
442
|
+
|
|
443
|
+
</span>
|
|
444
|
+
|
|
445
|
+
|
|
446
|
+
|
|
447
|
+
|
|
448
|
+
|
|
449
|
+
|
|
450
|
+
|
|
451
|
+
|
|
452
|
+
|
|
453
|
+
<span class="summary_desc"><div class='inline'>
|
|
454
|
+
<p>Get the Critter ready for the Expressor to express the geneotype.</p>
|
|
455
|
+
</div></span>
|
|
456
|
+
|
|
457
|
+
</li>
|
|
458
|
+
|
|
459
|
+
|
|
460
|
+
</ul>
|
|
461
|
+
|
|
462
|
+
|
|
463
|
+
|
|
464
|
+
|
|
465
|
+
|
|
466
|
+
|
|
467
|
+
|
|
468
|
+
|
|
469
|
+
|
|
470
|
+
|
|
471
|
+
|
|
472
|
+
<h3 class="inherited">Methods inherited from <span class='object_link'><a href="NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></h3>
|
|
473
|
+
<p class="inherited"><span class='object_link'><a href="NeatOb.html#log-instance_method" title="NEAT::NeatOb#log (method)">#log</a></span>, <span class='object_link'><a href="NeatOb.html#log-class_method" title="NEAT::NeatOb.log (method)">log</a></span>, <span class='object_link'><a href="NeatOb.html#to_s-instance_method" title="NEAT::NeatOb#to_s (method)">#to_s</a></span></p>
|
|
474
|
+
|
|
475
|
+
<div id="constructor_details" class="method_details_list">
|
|
476
|
+
<h2>Constructor Details</h2>
|
|
477
|
+
|
|
478
|
+
<div class="method_details first">
|
|
479
|
+
<h3 class="signature first" id="initialize-instance_method">
|
|
480
|
+
|
|
481
|
+
- (<tt><span class='object_link'><a href="" title="NEAT::Critter (class)">Critter</a></span></tt>) <strong>initialize</strong>(pop, mating = false, &block)
|
|
482
|
+
|
|
483
|
+
|
|
484
|
+
|
|
485
|
+
|
|
486
|
+
|
|
487
|
+
</h3><div class="docstring">
|
|
488
|
+
<div class="discussion">
|
|
489
|
+
|
|
490
|
+
<p>Critter construction. We construct the genotype. The phenotype will be
|
|
491
|
+
constructed by the Expressor operator.</p>
|
|
492
|
+
|
|
493
|
+
|
|
494
|
+
</div>
|
|
495
|
+
</div>
|
|
496
|
+
<div class="tags">
|
|
497
|
+
|
|
498
|
+
|
|
499
|
+
</div><table class="source_code">
|
|
500
|
+
<tr>
|
|
501
|
+
<td>
|
|
502
|
+
<pre class="lines">
|
|
503
|
+
|
|
504
|
+
|
|
505
|
+
20
|
|
506
|
+
21
|
|
507
|
+
22
|
|
508
|
+
23
|
|
509
|
+
24
|
|
510
|
+
25</pre>
|
|
511
|
+
</td>
|
|
512
|
+
<td>
|
|
513
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 20</span>
|
|
514
|
+
|
|
515
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span><span class='lparen'>(</span><span class='id identifier rubyid_pop'>pop</span><span class='comma'>,</span> <span class='id identifier rubyid_mating'>mating</span> <span class='op'>=</span> <span class='kw'>false</span><span class='comma'>,</span> <span class='op'>&</span><span class='id identifier rubyid_block'>block</span><span class='rparen'>)</span>
|
|
516
|
+
<span class='kw'>super</span> <span class='id identifier rubyid_pop'>pop</span><span class='period'>.</span><span class='id identifier rubyid_controller'>controller</span>
|
|
517
|
+
<span class='ivar'>@population</span> <span class='op'>=</span> <span class='id identifier rubyid_pop'>pop</span>
|
|
518
|
+
<span class='ivar'>@genotype</span> <span class='op'>=</span> <span class='const'>Genotype</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='kw'>self</span><span class='comma'>,</span> <span class='id identifier rubyid_mating'>mating</span><span class='rparen'>)</span>
|
|
519
|
+
<span class='id identifier rubyid_block'>block</span><span class='period'>.</span><span class='lparen'>(</span><span class='kw'>self</span><span class='rparen'>)</span> <span class='kw'>unless</span> <span class='id identifier rubyid_block'>block</span><span class='period'>.</span><span class='id identifier rubyid_nil?'>nil?</span>
|
|
520
|
+
<span class='kw'>end</span></pre>
|
|
521
|
+
</td>
|
|
522
|
+
</tr>
|
|
523
|
+
</table>
|
|
524
|
+
</div>
|
|
525
|
+
|
|
526
|
+
</div>
|
|
527
|
+
|
|
528
|
+
<div id="instance_attr_details" class="attr_details">
|
|
529
|
+
<h2>Instance Attribute Details</h2>
|
|
530
|
+
|
|
531
|
+
|
|
532
|
+
<span id="fitness=-instance_method"></span>
|
|
533
|
+
<div class="method_details first">
|
|
534
|
+
<h3 class="signature first" id="fitness-instance_method">
|
|
535
|
+
|
|
536
|
+
- (<tt>Object</tt>) <strong>fitness</strong>
|
|
537
|
+
|
|
538
|
+
|
|
539
|
+
|
|
540
|
+
|
|
541
|
+
|
|
542
|
+
</h3><div class="docstring">
|
|
543
|
+
<div class="discussion">
|
|
544
|
+
|
|
545
|
+
<p>Ratings assigned by Evaluator</p>
|
|
546
|
+
|
|
547
|
+
|
|
548
|
+
</div>
|
|
549
|
+
</div>
|
|
550
|
+
<div class="tags">
|
|
551
|
+
|
|
552
|
+
|
|
553
|
+
</div><table class="source_code">
|
|
554
|
+
<tr>
|
|
555
|
+
<td>
|
|
556
|
+
<pre class="lines">
|
|
557
|
+
|
|
558
|
+
|
|
559
|
+
16
|
|
560
|
+
17
|
|
561
|
+
18</pre>
|
|
562
|
+
</td>
|
|
563
|
+
<td>
|
|
564
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 16</span>
|
|
565
|
+
|
|
566
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_fitness'>fitness</span>
|
|
567
|
+
<span class='ivar'>@fitness</span>
|
|
568
|
+
<span class='kw'>end</span></pre>
|
|
569
|
+
</td>
|
|
570
|
+
</tr>
|
|
571
|
+
</table>
|
|
572
|
+
</div>
|
|
573
|
+
|
|
574
|
+
|
|
575
|
+
<span id="genotype=-instance_method"></span>
|
|
576
|
+
<div class="method_details ">
|
|
577
|
+
<h3 class="signature " id="genotype-instance_method">
|
|
578
|
+
|
|
579
|
+
- (<tt>Object</tt>) <strong>genotype</strong>
|
|
580
|
+
|
|
581
|
+
|
|
582
|
+
|
|
583
|
+
|
|
584
|
+
|
|
585
|
+
</h3><div class="docstring">
|
|
586
|
+
<div class="discussion">
|
|
587
|
+
|
|
588
|
+
<p>Returns the value of attribute genotype</p>
|
|
589
|
+
|
|
590
|
+
|
|
591
|
+
</div>
|
|
592
|
+
</div>
|
|
593
|
+
<div class="tags">
|
|
594
|
+
|
|
595
|
+
|
|
596
|
+
</div><table class="source_code">
|
|
597
|
+
<tr>
|
|
598
|
+
<td>
|
|
599
|
+
<pre class="lines">
|
|
600
|
+
|
|
601
|
+
|
|
602
|
+
13
|
|
603
|
+
14
|
|
604
|
+
15</pre>
|
|
605
|
+
</td>
|
|
606
|
+
<td>
|
|
607
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 13</span>
|
|
608
|
+
|
|
609
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_genotype'>genotype</span>
|
|
610
|
+
<span class='ivar'>@genotype</span>
|
|
611
|
+
<span class='kw'>end</span></pre>
|
|
612
|
+
</td>
|
|
613
|
+
</tr>
|
|
614
|
+
</table>
|
|
615
|
+
</div>
|
|
616
|
+
|
|
617
|
+
|
|
618
|
+
<span id="novelty=-instance_method"></span>
|
|
619
|
+
<div class="method_details ">
|
|
620
|
+
<h3 class="signature " id="novelty-instance_method">
|
|
621
|
+
|
|
622
|
+
- (<tt>Object</tt>) <strong>novelty</strong>
|
|
623
|
+
|
|
624
|
+
|
|
625
|
+
|
|
626
|
+
|
|
627
|
+
|
|
628
|
+
</h3><div class="docstring">
|
|
629
|
+
<div class="discussion">
|
|
630
|
+
|
|
631
|
+
<p>Ratings assigned by Evaluator</p>
|
|
632
|
+
|
|
633
|
+
|
|
634
|
+
</div>
|
|
635
|
+
</div>
|
|
636
|
+
<div class="tags">
|
|
637
|
+
|
|
638
|
+
|
|
639
|
+
</div><table class="source_code">
|
|
640
|
+
<tr>
|
|
641
|
+
<td>
|
|
642
|
+
<pre class="lines">
|
|
643
|
+
|
|
644
|
+
|
|
645
|
+
16
|
|
646
|
+
17
|
|
647
|
+
18</pre>
|
|
648
|
+
</td>
|
|
649
|
+
<td>
|
|
650
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 16</span>
|
|
651
|
+
|
|
652
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_novelty'>novelty</span>
|
|
653
|
+
<span class='ivar'>@novelty</span>
|
|
654
|
+
<span class='kw'>end</span></pre>
|
|
655
|
+
</td>
|
|
656
|
+
</tr>
|
|
657
|
+
</table>
|
|
658
|
+
</div>
|
|
659
|
+
|
|
660
|
+
|
|
661
|
+
<span id="phenotype=-instance_method"></span>
|
|
662
|
+
<div class="method_details ">
|
|
663
|
+
<h3 class="signature " id="phenotype-instance_method">
|
|
664
|
+
|
|
665
|
+
- (<tt>Object</tt>) <strong>phenotype</strong>
|
|
666
|
+
|
|
667
|
+
|
|
668
|
+
|
|
669
|
+
|
|
670
|
+
|
|
671
|
+
</h3><div class="docstring">
|
|
672
|
+
<div class="discussion">
|
|
673
|
+
|
|
674
|
+
<p>Returns the value of attribute phenotype</p>
|
|
675
|
+
|
|
676
|
+
|
|
677
|
+
</div>
|
|
678
|
+
</div>
|
|
679
|
+
<div class="tags">
|
|
680
|
+
|
|
681
|
+
|
|
682
|
+
</div><table class="source_code">
|
|
683
|
+
<tr>
|
|
684
|
+
<td>
|
|
685
|
+
<pre class="lines">
|
|
686
|
+
|
|
687
|
+
|
|
688
|
+
13
|
|
689
|
+
14
|
|
690
|
+
15</pre>
|
|
691
|
+
</td>
|
|
692
|
+
<td>
|
|
693
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 13</span>
|
|
694
|
+
|
|
695
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_phenotype'>phenotype</span>
|
|
696
|
+
<span class='ivar'>@phenotype</span>
|
|
697
|
+
<span class='kw'>end</span></pre>
|
|
698
|
+
</td>
|
|
699
|
+
</tr>
|
|
700
|
+
</table>
|
|
701
|
+
</div>
|
|
702
|
+
|
|
703
|
+
|
|
704
|
+
<span id=""></span>
|
|
705
|
+
<div class="method_details ">
|
|
706
|
+
<h3 class="signature " id="population-instance_method">
|
|
707
|
+
|
|
708
|
+
- (<tt>Object</tt>) <strong>population</strong> <span class="extras">(readonly)</span>
|
|
709
|
+
|
|
710
|
+
|
|
711
|
+
|
|
712
|
+
|
|
713
|
+
|
|
714
|
+
</h3><div class="docstring">
|
|
715
|
+
<div class="discussion">
|
|
716
|
+
|
|
717
|
+
<p>Returns the value of attribute population</p>
|
|
718
|
+
|
|
719
|
+
|
|
720
|
+
</div>
|
|
721
|
+
</div>
|
|
722
|
+
<div class="tags">
|
|
723
|
+
|
|
724
|
+
|
|
725
|
+
</div><table class="source_code">
|
|
726
|
+
<tr>
|
|
727
|
+
<td>
|
|
728
|
+
<pre class="lines">
|
|
729
|
+
|
|
730
|
+
|
|
731
|
+
12
|
|
732
|
+
13
|
|
733
|
+
14</pre>
|
|
734
|
+
</td>
|
|
735
|
+
<td>
|
|
736
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 12</span>
|
|
737
|
+
|
|
738
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_population'>population</span>
|
|
739
|
+
<span class='ivar'>@population</span>
|
|
740
|
+
<span class='kw'>end</span></pre>
|
|
741
|
+
</td>
|
|
742
|
+
</tr>
|
|
743
|
+
</table>
|
|
744
|
+
</div>
|
|
745
|
+
|
|
746
|
+
</div>
|
|
747
|
+
|
|
748
|
+
|
|
749
|
+
<div id="instance_method_details" class="method_details_list">
|
|
750
|
+
<h2>Instance Method Details</h2>
|
|
751
|
+
|
|
752
|
+
|
|
753
|
+
<div class="method_details first">
|
|
754
|
+
<h3 class="signature first" id="compare-instance_method">
|
|
755
|
+
|
|
756
|
+
- (<tt>Object</tt>) <strong>compare</strong>(oc)
|
|
757
|
+
|
|
758
|
+
|
|
759
|
+
|
|
760
|
+
|
|
761
|
+
|
|
762
|
+
</h3><div class="docstring">
|
|
763
|
+
<div class="discussion">
|
|
764
|
+
|
|
765
|
+
<p>Compare ourselves against another critter for compability.</p>
|
|
766
|
+
|
|
767
|
+
<p>The function to be used here is: distance = c1*E + c2*D + c3*W</p>
|
|
768
|
+
|
|
769
|
+
<p>Where: E, D - The number of excess and disjoint genes repesctively. N - The
|
|
770
|
+
number of genes in the largest genome. W - The sum of absolute weight
|
|
771
|
+
differences.</p>
|
|
772
|
+
|
|
773
|
+
<p>This is a variation of the formulation suggested by the Stanley paper,
|
|
774
|
+
which normalizes the E and D terms by N.</p>
|
|
775
|
+
|
|
776
|
+
|
|
777
|
+
</div>
|
|
778
|
+
</div>
|
|
779
|
+
<div class="tags">
|
|
780
|
+
|
|
781
|
+
|
|
782
|
+
</div><table class="source_code">
|
|
783
|
+
<tr>
|
|
784
|
+
<td>
|
|
785
|
+
<pre class="lines">
|
|
786
|
+
|
|
787
|
+
|
|
788
|
+
333
|
|
789
|
+
334
|
|
790
|
+
335
|
|
791
|
+
336
|
|
792
|
+
337
|
|
793
|
+
338
|
|
794
|
+
339
|
|
795
|
+
340
|
|
796
|
+
341</pre>
|
|
797
|
+
</td>
|
|
798
|
+
<td>
|
|
799
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 333</span>
|
|
800
|
+
|
|
801
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_compare'>compare</span><span class='lparen'>(</span><span class='id identifier rubyid_oc'>oc</span><span class='rparen'>)</span>
|
|
802
|
+
<span class='id identifier rubyid_c1'>c1</span> <span class='op'>=</span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_parms'>parms</span><span class='period'>.</span><span class='id identifier rubyid_excess_coefficient'>excess_coefficient</span>
|
|
803
|
+
<span class='id identifier rubyid_c2'>c2</span> <span class='op'>=</span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_parms'>parms</span><span class='period'>.</span><span class='id identifier rubyid_disjoint_coefficient'>disjoint_coefficient</span>
|
|
804
|
+
<span class='id identifier rubyid_c3'>c3</span> <span class='op'>=</span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_parms'>parms</span><span class='period'>.</span><span class='id identifier rubyid_weight_coefficient'>weight_coefficient</span>
|
|
805
|
+
<span class='id identifier rubyid_e'>e</span> <span class='op'>=</span> <span class='id identifier rubyid_excess'>excess</span><span class='lparen'>(</span><span class='id identifier rubyid_oc'>oc</span><span class='rparen'>)</span>
|
|
806
|
+
<span class='id identifier rubyid_d'>d</span> <span class='op'>=</span> <span class='id identifier rubyid_disjoint'>disjoint</span><span class='lparen'>(</span><span class='id identifier rubyid_oc'>oc</span><span class='rparen'>)</span>
|
|
807
|
+
<span class='id identifier rubyid_w'>w</span> <span class='op'>=</span> <span class='id identifier rubyid_weight_diff'>weight_diff</span><span class='lparen'>(</span><span class='id identifier rubyid_oc'>oc</span><span class='rparen'>)</span>
|
|
808
|
+
<span class='kw'>return</span> <span class='id identifier rubyid_c1'>c1</span> <span class='op'>*</span> <span class='id identifier rubyid_e'>e</span> <span class='op'>+</span> <span class='id identifier rubyid_c2'>c2</span> <span class='op'>*</span> <span class='id identifier rubyid_d'>d</span> <span class='op'>+</span> <span class='id identifier rubyid_c3'>c3</span> <span class='op'>*</span> <span class='id identifier rubyid_w'>w</span>
|
|
809
|
+
<span class='kw'>end</span></pre>
|
|
810
|
+
</td>
|
|
811
|
+
</tr>
|
|
812
|
+
</table>
|
|
813
|
+
</div>
|
|
814
|
+
|
|
815
|
+
<div class="method_details ">
|
|
816
|
+
<h3 class="signature " id="dump_s-instance_method">
|
|
817
|
+
|
|
818
|
+
- (<tt>Object</tt>) <strong>dump_s</strong>
|
|
819
|
+
|
|
820
|
+
|
|
821
|
+
|
|
822
|
+
|
|
823
|
+
|
|
824
|
+
</h3><div class="docstring">
|
|
825
|
+
<div class="discussion">
|
|
826
|
+
|
|
827
|
+
<p>Critter print</p>
|
|
828
|
+
|
|
829
|
+
|
|
830
|
+
</div>
|
|
831
|
+
</div>
|
|
832
|
+
<div class="tags">
|
|
833
|
+
|
|
834
|
+
|
|
835
|
+
</div><table class="source_code">
|
|
836
|
+
<tr>
|
|
837
|
+
<td>
|
|
838
|
+
<pre class="lines">
|
|
839
|
+
|
|
840
|
+
|
|
841
|
+
344
|
|
842
|
+
345
|
|
843
|
+
346</pre>
|
|
844
|
+
</td>
|
|
845
|
+
<td>
|
|
846
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 344</span>
|
|
847
|
+
|
|
848
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_dump_s'>dump_s</span>
|
|
849
|
+
<span class='id identifier rubyid_to_s'>to_s</span> <span class='op'>+</span> <span class='ivar'>@genotype</span><span class='period'>.</span><span class='id identifier rubyid_dump_s'>dump_s</span> <span class='op'>+</span> <span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_content'>\n</span><span class='tstring_end'>"</span></span> <span class='op'>+</span> <span class='ivar'>@phenotype</span><span class='period'>.</span><span class='id identifier rubyid_to_s'>to_s</span> <span class='op'>+</span> <span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_content'>\n</span><span class='tstring_end'>"</span></span>
|
|
850
|
+
<span class='kw'>end</span></pre>
|
|
851
|
+
</td>
|
|
852
|
+
</tr>
|
|
853
|
+
</table>
|
|
854
|
+
</div>
|
|
855
|
+
|
|
856
|
+
<div class="method_details ">
|
|
857
|
+
<h3 class="signature " id="evaluate!-instance_method">
|
|
858
|
+
|
|
859
|
+
- (<tt>Object</tt>) <strong>evaluate!</strong>
|
|
860
|
+
|
|
861
|
+
|
|
862
|
+
|
|
863
|
+
|
|
864
|
+
|
|
865
|
+
</h3><div class="docstring">
|
|
866
|
+
<div class="discussion">
|
|
867
|
+
|
|
868
|
+
<p>A single evaluation step. Evaluate and generate fitness, novelty, etc.
|
|
869
|
+
Returns the result.</p>
|
|
870
|
+
|
|
871
|
+
|
|
872
|
+
</div>
|
|
873
|
+
</div>
|
|
874
|
+
<div class="tags">
|
|
875
|
+
|
|
876
|
+
|
|
877
|
+
</div><table class="source_code">
|
|
878
|
+
<tr>
|
|
879
|
+
<td>
|
|
880
|
+
<pre class="lines">
|
|
881
|
+
|
|
882
|
+
|
|
883
|
+
50
|
|
884
|
+
51
|
|
885
|
+
52</pre>
|
|
886
|
+
</td>
|
|
887
|
+
<td>
|
|
888
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 50</span>
|
|
889
|
+
|
|
890
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_evaluate!'>evaluate!</span>
|
|
891
|
+
<span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_evaluator'>evaluator</span><span class='period'>.</span><span class='id identifier rubyid_evaluate!'>evaluate!</span> <span class='kw'>self</span>
|
|
892
|
+
<span class='kw'>end</span></pre>
|
|
893
|
+
</td>
|
|
894
|
+
</tr>
|
|
895
|
+
</table>
|
|
896
|
+
</div>
|
|
897
|
+
|
|
898
|
+
<div class="method_details ">
|
|
899
|
+
<h3 class="signature " id="express!-instance_method">
|
|
900
|
+
|
|
901
|
+
- (<tt>Object</tt>) <strong>express!</strong>
|
|
902
|
+
|
|
903
|
+
|
|
904
|
+
|
|
905
|
+
|
|
906
|
+
|
|
907
|
+
</h3><div class="docstring">
|
|
908
|
+
<div class="discussion">
|
|
909
|
+
|
|
910
|
+
<p>Exoress this critter using the Expressor plugin.</p>
|
|
911
|
+
|
|
912
|
+
|
|
913
|
+
</div>
|
|
914
|
+
</div>
|
|
915
|
+
<div class="tags">
|
|
916
|
+
|
|
917
|
+
|
|
918
|
+
</div><table class="source_code">
|
|
919
|
+
<tr>
|
|
920
|
+
<td>
|
|
921
|
+
<pre class="lines">
|
|
922
|
+
|
|
923
|
+
|
|
924
|
+
36
|
|
925
|
+
37
|
|
926
|
+
38</pre>
|
|
927
|
+
</td>
|
|
928
|
+
<td>
|
|
929
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 36</span>
|
|
930
|
+
|
|
931
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_express!'>express!</span>
|
|
932
|
+
<span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_expressor'>expressor</span><span class='period'>.</span><span class='id identifier rubyid_express!'>express!</span> <span class='kw'>self</span>
|
|
933
|
+
<span class='kw'>end</span></pre>
|
|
934
|
+
</td>
|
|
935
|
+
</tr>
|
|
936
|
+
</table>
|
|
937
|
+
</div>
|
|
938
|
+
|
|
939
|
+
<div class="method_details ">
|
|
940
|
+
<h3 class="signature " id="initialize_neurons!-instance_method">
|
|
941
|
+
|
|
942
|
+
- (<tt>Object</tt>) <strong>initialize_neurons!</strong>
|
|
943
|
+
|
|
944
|
+
|
|
945
|
+
|
|
946
|
+
|
|
947
|
+
|
|
948
|
+
</h3><div class="docstring">
|
|
949
|
+
<div class="discussion">
|
|
950
|
+
|
|
951
|
+
<p>This initializes neurons in preparation for recurrence. Note that the
|
|
952
|
+
Critter should already have expressed its genotype before this is called.</p>
|
|
953
|
+
|
|
954
|
+
|
|
955
|
+
</div>
|
|
956
|
+
</div>
|
|
957
|
+
<div class="tags">
|
|
958
|
+
|
|
959
|
+
|
|
960
|
+
</div><table class="source_code">
|
|
961
|
+
<tr>
|
|
962
|
+
<td>
|
|
963
|
+
<pre class="lines">
|
|
964
|
+
|
|
965
|
+
|
|
966
|
+
43
|
|
967
|
+
44
|
|
968
|
+
45</pre>
|
|
969
|
+
</td>
|
|
970
|
+
<td>
|
|
971
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 43</span>
|
|
972
|
+
|
|
973
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_initialize_neurons!'>initialize_neurons!</span>
|
|
974
|
+
<span class='ivar'>@phenotype</span><span class='period'>.</span><span class='id identifier rubyid_initialize_neurons'>initialize_neurons</span>
|
|
975
|
+
<span class='kw'>end</span></pre>
|
|
976
|
+
</td>
|
|
977
|
+
</tr>
|
|
978
|
+
</table>
|
|
979
|
+
</div>
|
|
980
|
+
|
|
981
|
+
<div class="method_details ">
|
|
982
|
+
<h3 class="signature " id="ready_for_expression!-instance_method">
|
|
983
|
+
|
|
984
|
+
- (<tt>Object</tt>) <strong>ready_for_expression!</strong>
|
|
985
|
+
|
|
986
|
+
|
|
987
|
+
|
|
988
|
+
|
|
989
|
+
|
|
990
|
+
</h3><div class="docstring">
|
|
991
|
+
<div class="discussion">
|
|
992
|
+
|
|
993
|
+
<p>Get the Critter ready for the Expressor to express the geneotype.</p>
|
|
994
|
+
|
|
995
|
+
|
|
996
|
+
</div>
|
|
997
|
+
</div>
|
|
998
|
+
<div class="tags">
|
|
999
|
+
|
|
1000
|
+
|
|
1001
|
+
</div><table class="source_code">
|
|
1002
|
+
<tr>
|
|
1003
|
+
<td>
|
|
1004
|
+
<pre class="lines">
|
|
1005
|
+
|
|
1006
|
+
|
|
1007
|
+
29
|
|
1008
|
+
30
|
|
1009
|
+
31
|
|
1010
|
+
32
|
|
1011
|
+
33</pre>
|
|
1012
|
+
</td>
|
|
1013
|
+
<td>
|
|
1014
|
+
<pre class="code"><span class="info file"># File 'lib/rubyneat/critter.rb', line 29</span>
|
|
1015
|
+
|
|
1016
|
+
<span class='kw'>def</span> <span class='id identifier rubyid_ready_for_expression!'>ready_for_expression!</span>
|
|
1017
|
+
<span class='ivar'>@genotype</span><span class='period'>.</span><span class='id identifier rubyid_wire!'>wire!</span>
|
|
1018
|
+
<span class='ivar'>@phenotype</span> <span class='op'>=</span> <span class='const'>NEAT</span><span class='op'>::</span><span class='const'>Critter</span><span class='op'>::</span><span class='const'>Phenotype</span><span class='lbracket'>[</span><span class='kw'>self</span><span class='rbracket'>]</span>
|
|
1019
|
+
<span class='ivar'>@phenotype</span>
|
|
1020
|
+
<span class='kw'>end</span></pre>
|
|
1021
|
+
</td>
|
|
1022
|
+
</tr>
|
|
1023
|
+
</table>
|
|
1024
|
+
</div>
|
|
1025
|
+
|
|
1026
|
+
</div>
|
|
1027
|
+
|
|
1028
|
+
</div>
|
|
1029
|
+
|
|
1030
|
+
<div id="footer">
|
|
1031
|
+
Generated on Sun Apr 13 15:54:02 2014 by
|
|
1032
|
+
<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
|
|
1033
|
+
0.8.7.4 (ruby-2.1.1).
|
|
1034
|
+
</div>
|
|
1035
|
+
|
|
1036
|
+
</body>
|
|
1037
|
+
</html>
|