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evaluates phenotype of critter for fitness, novelty, etc.</h1></p>
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<p><p>We can have a chain of these evaluators whose outputs are summed,
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<a href="#analyze_for_fitness%21-instance_method" title="#analyze_for_fitness! (instance method)">- (Object) <strong>analyze_for_fitness!</strong>(critter) </a>
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<p><p>Analyze the evaluation and compute a fitness for the given
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critter.</p> </div></span></p>
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<p><p>Evaluate one step of a sequence of evaluations.</p>
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<span class="summary_desc"><div class='inline'></pre>
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<p><p>This is call prior to any sequence evaluation.</p>
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<h3 class="inherited">Methods inherited from <span class='object_link'><a href="NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-regexp">/span></</span><span class="ruby-identifier">h3</span><span class="ruby-operator">></span>
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<span class="ruby-operator"><</span><span class="ruby-identifier">p</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">"inherited"</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'object_link'</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-node">"NeatOb.html#initialize-instance_method"</span> <span class="ruby-identifier">title</span>=<span class="ruby-node">"NEAT::NeatOb#initialize (method)"</span><span class="ruby-operator">></span><span class="ruby-comment">#initialize</a></span>, <span class='object_link'><a href="NeatOb.html#log-instance_method" title="NEAT::NeatOb#log (method)">#log</a></span>, <span class='object_link'><a href="NeatOb.html#log-class_method" title="NEAT::NeatOb.log (method)">log</a></span>, <span class='object_link'><a href="NeatOb.html#to_s-instance_method" title="NEAT::NeatOb#to_s (method)">#to_s</a></span></p></span>
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<p class="notice">This class inherits a constructor from <span class='object_link'><a href="NeatOb.html#initialize-instance_method" title="NEAT::NeatOb#initialize (method)">NEAT::NeatOb</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-regexp">/span></</span><span class="ruby-identifier">p</span><span class="ruby-operator">></span>
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<h3 class="signature first" id="analyze_for_fitness!-instance_method">
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- (<tt>Object</tt>) <strong>analyze_for_fitness!</strong>(critter)</pre>
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<p><p>Analyze the evaluation and compute a fitness for the given
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critter. Note that if cost_func is set, we call that to integrate the cost
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to the fitness average fitness calculated for the fitness vector.</p></p>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evaluator.rb', line 40</span></pre>
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rubyid_analyze_for_fitness!'>analyze_for_fitness!</span><span
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<pre><span class='id identifier rubyid_fitvec'>fitvec</span> <span class='op'>=</span> <span class='ivar'>@crit_hist</span><span class='lbracket'>[</span><span class='id identifier rubyid_critter'>critter</span><span class='rbracket'>]</span><span class='period'>.</span><span class='id identifier rubyid_map'>map</span><span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_seq'>seq</span><span class='comma'>,</span> <span class='id identifier rubyid_vio'>vio</span><span class='op'>|</span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_fitness_func'>fitness_func</span><span class='period'>.</span><span class='lparen'>(</span><span class='id identifier rubyid_vio'>vio</span><span class='lbracket'>[</span><span class='int'>0</span><span class='rbracket'>]</span><span class='comma'>,</span> <span class='id identifier rubyid_vio'>vio</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span><span class='comma'>,</span> <span class='id identifier rubyid_seq'>seq</span><span class='rparen'>)</span> <span class='rbrace'>}</span>
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<span class='comment'># Average the fitness vector to get a scalar fitness.</pre>
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<p></span> <span class='id identifier
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<pre> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_cost_func'>cost_func</span><span class='period'>.</span><span class='lparen'>(</span><span class='id identifier rubyid_fitvec'>fitvec</span><span class='comma'>,</span> <span class='id identifier rubyid_critter'>critter</span><span class='period'>.</span><span class='id identifier rubyid_genotype'>genotype</span><span class='period'>.</span><span class='id identifier rubyid_fitness_cost'>fitness_cost</span><span class='rparen'>)</span>
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<span class='kw'>else</span>
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<span class='id identifier rubyid_fitvec'>fitvec</span><span class='period'>.</span><span class='id identifier rubyid_reduce'>reduce</span> <span class='lbrace'>{</span><span class='op'>|</span><span class='id identifier rubyid_a'>a</span><span class='comma'>,</span><span class='id identifier rubyid_r'>r</span><span class='op'>|</span> <span class='id identifier rubyid_a'>a</span><span class='op'>+</span><span class='id identifier rubyid_r'>r</span><span class='rbrace'>}</span> <span class='op'>/</span> <span class='id identifier rubyid_fitvec'>fitvec</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span><span class='period'>.</span><span class='id identifier rubyid_to_f'>to_f</span> <span class='op'>+</span> <span class='id identifier rubyid_critter'>critter</span><span class='period'>.</span><span class='id identifier rubyid_genotype'>genotype</span><span class='period'>.</span><span class='id identifier rubyid_fitness_cost'>fitness_cost</span>
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<span class='kw'>end</span>
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<span class='id identifier rubyid_log'>log</span><span class='period'>.</span><span class='id identifier rubyid_debug'>debug</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Fitness Vector: </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_fitvec'>fitvec</span><span class='embexpr_end'>}</span><span class='tstring_content'>, fitness of </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_critter'>critter</span><span class='period'>.</span><span class='id identifier rubyid_fitness'>fitness</span><span class='embexpr_end'>}</span><span class='tstring_content'> assigned to </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_critter'>critter</span><span class='embexpr_end'>}</span><span class='tstring_end'>&quot;</span></span></pre>
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<p><span class='kw'>end</span></pre></p>
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<pre> </td>
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<pre> <div class="method_details ">
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- (<tt>Object</tt>) <strong>evaluate!</strong>(critter)</pre>
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<p></h3><div class=“docstring”></p>
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<pre><div class="discussion"></pre>
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<p><p>Evaluate one step of a sequence of evaluations. For time series
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and realtime ongoing evaluations, everything is.</p></p>
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<p><p>Returns [vin, vout], where vin is the input vector, and vout in
|
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the output vector from the critter. FIXME: this should not really have to
|
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deal with an error. FIXME: the error should be handled upstream from
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<p>24 25 26 27 28 29 30 31 32 33 34 35</pre></p>
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<pre class="code"><span class="info file"># File 'lib/rubyneat/evaluator.rb', line 24</span></pre>
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<pre><span class='id identifier rubyid_vin'>vin</span> <span class='op'>=</span> <span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_query_func'>query_func</span><span class='period'>.</span><span class='lparen'>(</span><span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_seq_num'>seq_num</span><span class='rparen'>)</span>
|
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<span class='ivar'>@crit_hist</span><span class='lbracket'>[</span><span class='id identifier rubyid_critter'>critter</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='lbrace'>{</span><span class='rbrace'>}</span> <span class='kw'>unless</span> <span class='ivar'>@crit_hist</span><span class='period'>.</span><span class='id identifier rubyid_member?'>member?</span> <span class='id identifier rubyid_critter'>critter</span>
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<span class='kw'>begin</span>
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<span class='id identifier rubyid_vout'>vout</span> <span class='op'>=</span> <span class='id identifier rubyid_critter'>critter</span><span class='period'>.</span><span class='id identifier rubyid_phenotype'>phenotype</span><span class='period'>.</span><span class='id identifier rubyid_stimulate'>stimulate</span> <span class='op'>*</span><span class='id identifier rubyid_vin'>vin</span><span class='comma'>,</span> <span class='op'>&amp;</span><span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_recurrence_func'>recurrence_func</span>
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<span class='id identifier rubyid_log'>log</span><span class='period'>.</span><span class='id identifier rubyid_debug'>debug</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Critter </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_critter'>critter</span><span class='period'>.</span><span class='id identifier rubyid_name'>name</span><span class='embexpr_end'>}</span><span class='tstring_content'>: vin=</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_vin'>vin</span><span class='embexpr_end'>}</span><span class='tstring_content'>. vout=</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_vout'>vout</span><span class='embexpr_end'>}</span><span class='tstring_end'>&quot;</span></span>
|
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<span class='ivar'>@crit_hist</span><span class='lbracket'>[</span><span class='id identifier rubyid_critter'>critter</span><span class='rbracket'>]</span><span class='lbracket'>[</span><span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_seq_num'>seq_num</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='lbracket'>[</span><span class='id identifier rubyid_vin'>vin</span><span class='comma'>,</span> <span class='id identifier rubyid_vout'>vout</span><span class='rbracket'>]</span>
|
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<span class='kw'>rescue</span> <span class='const'>Exception</span> <span class='op'>=&gt;</span> <span class='id identifier rubyid_e'>e</span>
|
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<span class='id identifier rubyid_log'>log</span><span class='period'>.</span><span class='id identifier rubyid_error'>error</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Exception </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_e'>e</span><span class='embexpr_end'>}</span><span class='tstring_content'> on code:\n</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_critter'>critter</span><span class='period'>.</span><span class='id identifier rubyid_phenotype'>phenotype</span><span class='period'>.</span><span class='id identifier rubyid_code'>code</span><span class='embexpr_end'>}</span><span class='tstring_end'>&quot;</span></span>
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<span class='ivar'>@crit_hist</span><span class='lbracket'>[</span><span class='id identifier rubyid_critter'>critter</span><span class='rbracket'>]</span><span class='lbracket'>[</span><span class='ivar'>@controller</span><span class='period'>.</span><span class='id identifier rubyid_seq_num'>seq_num</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='lbracket'>[</span><span class='id identifier rubyid_vin'>vin</span><span class='comma'>,</span> <span class='symbol'>:error</span><span class='rbracket'>]</span>
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<span class='kw'>end</span></pre>
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<p><span class='kw'>end</span></pre></p>
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<pre> </td>
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<pre> <div class="method_details ">
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<h3 class="signature " id="ready_for_evaluation-instance_method">
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- (<tt>Object</tt>) <strong>ready_for_evaluation</strong>(pop)</pre>
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<p></h3><div class=“docstring”></p>
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<pre><div class="discussion"></pre>
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<p><p>This is call prior to any sequence evaluation. Here, we clean up
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persistent tracking information, etc.</p></p>
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<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
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