rubyneat 0.3.5.alpha.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (261) hide show
  1. checksums.yaml +7 -0
  2. data/.directory +4 -0
  3. data/.gitignore.orig +20 -0
  4. data/.idea/.name +1 -0
  5. data/.idea/.rakeTasks +7 -0
  6. data/.idea/dictionaries/trader.xml +3 -0
  7. data/.idea/encodings.xml +5 -0
  8. data/.idea/misc.xml +5 -0
  9. data/.idea/modules.xml +9 -0
  10. data/.idea/rubyneat.iml +197 -0
  11. data/.idea/runConfigurations/invpend_neat.xml +26 -0
  12. data/.idea/runConfigurations/sigdebug_neat.xml +24 -0
  13. data/.idea/runConfigurations/xor_neat.xml +26 -0
  14. data/.idea/runConfigurations/xordebug_neat.xml +24 -0
  15. data/.idea/runConfigurations/xorsin_neat.xml +24 -0
  16. data/.idea/scopes/scope_settings.xml +5 -0
  17. data/.idea/vcs.xml +7 -0
  18. data/.idea/workspace.xml +1124 -0
  19. data/.semver +5 -0
  20. data/.yardoc/checksums +11 -0
  21. data/.yardoc/object_types +0 -0
  22. data/.yardoc/objects/root.dat +0 -0
  23. data/.yardoc/proxy_types +0 -0
  24. data/Gemfile +32 -0
  25. data/Gemfile.lock +135 -0
  26. data/Gemfile.lock.orig +147 -0
  27. data/Guardfile +8 -0
  28. data/Rakefile +61 -0
  29. data/bin/neat +83 -0
  30. data/config/application.rb +5 -0
  31. data/doc/ControllerPoint.html +125 -0
  32. data/doc/CuteA.html +286 -0
  33. data/doc/CuteB.html +297 -0
  34. data/doc/DSL.html +883 -0
  35. data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +518 -0
  36. data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +274 -0
  37. data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +366 -0
  38. data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +275 -0
  39. data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +274 -0
  40. data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +274 -0
  41. data/doc/NEAT/BasicNeuronTypes.html +136 -0
  42. data/doc/NEAT/Controller/NeatSettings.html +3985 -0
  43. data/doc/NEAT/Controller.html +2490 -0
  44. data/doc/NEAT/Critter/Genotype/Gene.html +979 -0
  45. data/doc/NEAT/Critter/Genotype.html +1601 -0
  46. data/doc/NEAT/Critter/Phenotype.html +603 -0
  47. data/doc/NEAT/Critter.html +1037 -0
  48. data/doc/NEAT/DSL.html +1255 -0
  49. data/doc/NEAT/Evaluator.html +420 -0
  50. data/doc/NEAT/Evolver/CritterOp.html +551 -0
  51. data/doc/NEAT/Evolver.html +602 -0
  52. data/doc/NEAT/Expressor.html +327 -0
  53. data/doc/NEAT/Graph/DependencyResolver.html +478 -0
  54. data/doc/NEAT/Graph/GraphException.html +123 -0
  55. data/doc/NEAT/Graph.html +402 -0
  56. data/doc/NEAT/NeatException.html +123 -0
  57. data/doc/NEAT/NeatOb.html +567 -0
  58. data/doc/NEAT/Neuron.html +1067 -0
  59. data/doc/NEAT/Operator.html +162 -0
  60. data/doc/NEAT/Population.html +1961 -0
  61. data/doc/NEAT/Trait.html +169 -0
  62. data/doc/NEAT.html +588 -0
  63. data/doc/_index.html +373 -0
  64. data/doc/class_list.html +54 -0
  65. data/doc/css/common.css +1 -0
  66. data/doc/css/full_list.css +57 -0
  67. data/doc/css/style.css +339 -0
  68. data/doc/file_list.html +53 -0
  69. data/doc/frames.html +26 -0
  70. data/doc/index.html +373 -0
  71. data/doc/js/app.js +219 -0
  72. data/doc/js/full_list.js +178 -0
  73. data/doc/js/jquery.js +4 -0
  74. data/doc/method_list.html +1415 -0
  75. data/doc/top-level-namespace.html +164 -0
  76. data/foo/foo_aquarium_example.rb +38 -0
  77. data/foo/foo_gosu.rb +99 -0
  78. data/foo/foo_rubygoo.rb +104 -0
  79. data/foo/foo_sdl.rb +34 -0
  80. data/foo/icon.png +0 -0
  81. data/lib/rubyneat/critter.rb +374 -0
  82. data/lib/rubyneat/default_neat.rb +10 -0
  83. data/lib/rubyneat/dsl.rb +130 -0
  84. data/lib/rubyneat/evaluator.rb +51 -0
  85. data/lib/rubyneat/evolver.rb +315 -0
  86. data/lib/rubyneat/expressor.rb +110 -0
  87. data/lib/rubyneat/graph.rb +95 -0
  88. data/lib/rubyneat/neuron.rb +152 -0
  89. data/lib/rubyneat/population.rb +227 -0
  90. data/lib/rubyneat/rubyneat.rb +429 -0
  91. data/lib/rubyneat.rb +8 -0
  92. data/neater/invpend_neat.rb +150 -0
  93. data/neater/rnlib/inverted_pendulum.rb +380 -0
  94. data/neater/rnlib/xor.rb +10 -0
  95. data/neater/sigdebug_neat.rb +136 -0
  96. data/neater/xor_neat.rb +137 -0
  97. data/neater/xoranalog_neat.rb +138 -0
  98. data/neater/xorsin_neat.rb +143 -0
  99. data/projectFilesBackup/.idea/rubyneat.iml +180 -0
  100. data/public/.directory +4 -0
  101. data/public/background.png +0 -0
  102. data/public/background.xcf +0 -0
  103. data/public/cart.png +0 -0
  104. data/public/cart.xcf +0 -0
  105. data/public/metalpoles_molton_ball_l.jpg +0 -0
  106. data/public/old_background.png +0 -0
  107. data/public/pointer.png +0 -0
  108. data/public/pointer.xcf +0 -0
  109. data/public/pole.kra +0 -0
  110. data/public/pole.png +0 -0
  111. data/public/pole.xcf +0 -0
  112. data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
  113. data/public/wheel.png +0 -0
  114. data/public/wheel.xcf +0 -0
  115. data/public/wood-planks-texture.jpg +0 -0
  116. data/rdoc/ControllerPoint.html +116 -0
  117. data/rdoc/CuteA.html +177 -0
  118. data/rdoc/CuteB.html +178 -0
  119. data/rdoc/DSLSetup.html +177 -0
  120. data/rdoc/GameTestWindow.html +242 -0
  121. data/rdoc/GameWindow.html +292 -0
  122. data/rdoc/Gemfile.html +215 -0
  123. data/rdoc/Gemfile_lock.html +327 -0
  124. data/rdoc/GraphTest.html +210 -0
  125. data/rdoc/Guardfile.html +198 -0
  126. data/rdoc/InvertedPendulum/Cart.html +668 -0
  127. data/rdoc/InvertedPendulum/DSL.html +259 -0
  128. data/rdoc/InvertedPendulum/InvPendWindow.html +402 -0
  129. data/rdoc/InvertedPendulum.html +198 -0
  130. data/rdoc/Logger.html +98 -0
  131. data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +265 -0
  132. data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +162 -0
  133. data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +206 -0
  134. data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +162 -0
  135. data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +162 -0
  136. data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +161 -0
  137. data/rdoc/NEAT/BasicNeuronTypes.html +107 -0
  138. data/rdoc/NEAT/Controller/NeatSettings.html +880 -0
  139. data/rdoc/NEAT/Controller.html +729 -0
  140. data/rdoc/NEAT/Critter/Genotype/Gene.html +457 -0
  141. data/rdoc/NEAT/Critter/Genotype.html +735 -0
  142. data/rdoc/NEAT/Critter/Phenotype.html +330 -0
  143. data/rdoc/NEAT/Critter.html +489 -0
  144. data/rdoc/NEAT/DSL.html +729 -0
  145. data/rdoc/NEAT/Evaluator.html +256 -0
  146. data/rdoc/NEAT/Evolver/CritterOp.html +349 -0
  147. data/rdoc/NEAT/Evolver.html +891 -0
  148. data/rdoc/NEAT/Expressor.html +402 -0
  149. data/rdoc/NEAT/Graph/DependencyResolver.html +291 -0
  150. data/rdoc/NEAT/Graph/GraphException.html +105 -0
  151. data/rdoc/NEAT/Graph.html +263 -0
  152. data/rdoc/NEAT/NeatException.html +105 -0
  153. data/rdoc/NEAT/NeatOb.html +325 -0
  154. data/rdoc/NEAT/Neuron.html +481 -0
  155. data/rdoc/NEAT/Operator.html +109 -0
  156. data/rdoc/NEAT/Population.html +935 -0
  157. data/rdoc/NEAT/Trait.html +117 -0
  158. data/rdoc/NEAT.html +422 -0
  159. data/rdoc/Object.html +384 -0
  160. data/rdoc/Phi.html +98 -0
  161. data/rdoc/Player.html +383 -0
  162. data/rdoc/Rakefile.html +254 -0
  163. data/rdoc/RubyNEAT/Application.html +105 -0
  164. data/rdoc/RubyNEAT.html +98 -0
  165. data/rdoc/SDL/Event2.html +98 -0
  166. data/rdoc/SDL.html +98 -0
  167. data/rdoc/Vector.html +195 -0
  168. data/rdoc/created.rid +125 -0
  169. data/rdoc/doc/ControllerPoint_html.html +299 -0
  170. data/rdoc/doc/CuteA_html.html +438 -0
  171. data/rdoc/doc/CuteB_html.html +436 -0
  172. data/rdoc/doc/DSL_html.html +992 -0
  173. data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +617 -0
  174. data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +413 -0
  175. data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +498 -0
  176. data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +413 -0
  177. data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +413 -0
  178. data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +412 -0
  179. data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +310 -0
  180. data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +3324 -0
  181. data/rdoc/doc/NEAT/Controller_html.html +2212 -0
  182. data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +997 -0
  183. data/rdoc/doc/NEAT/Critter/Genotype_html.html +1556 -0
  184. data/rdoc/doc/NEAT/Critter/Phenotype_html.html +687 -0
  185. data/rdoc/doc/NEAT/Critter_html.html +1037 -0
  186. data/rdoc/doc/NEAT/DSL_html.html +1349 -0
  187. data/rdoc/doc/NEAT/Evaluator_html.html +556 -0
  188. data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +690 -0
  189. data/rdoc/doc/NEAT/Evolver_html.html +677 -0
  190. data/rdoc/doc/NEAT/Expressor_html.html +468 -0
  191. data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +598 -0
  192. data/rdoc/doc/NEAT/Graph/GraphException_html.html +299 -0
  193. data/rdoc/doc/NEAT/Graph_html.html +527 -0
  194. data/rdoc/doc/NEAT/NeatException_html.html +299 -0
  195. data/rdoc/doc/NEAT/NeatOb_html.html +671 -0
  196. data/rdoc/doc/NEAT/Neuron_html.html +1095 -0
  197. data/rdoc/doc/NEAT/Operator_html.html +337 -0
  198. data/rdoc/doc/NEAT/Population_html.html +1795 -0
  199. data/rdoc/doc/NEAT/Trait_html.html +344 -0
  200. data/rdoc/doc/NEAT_html.html +736 -0
  201. data/rdoc/doc/_index_html.html +559 -0
  202. data/rdoc/doc/class_list_html.html +369 -0
  203. data/rdoc/doc/css/common_css.html +188 -0
  204. data/rdoc/doc/css/full_list_css.html +243 -0
  205. data/rdoc/doc/css/style_css.html +530 -0
  206. data/rdoc/doc/file_list_html.html +240 -0
  207. data/rdoc/doc/frames_html.html +217 -0
  208. data/rdoc/doc/index_html.html +559 -0
  209. data/rdoc/doc/js/app_js.html +423 -0
  210. data/rdoc/doc/js/full_list_js.html +372 -0
  211. data/rdoc/doc/js/jquery_js.html +1536 -0
  212. data/rdoc/doc/method_list_html.html +1375 -0
  213. data/rdoc/doc/top-level-namespace_html.html +317 -0
  214. data/rdoc/fonts/Lato-Light.ttf +0 -0
  215. data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
  216. data/rdoc/fonts/Lato-Regular.ttf +0 -0
  217. data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
  218. data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
  219. data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
  220. data/rdoc/fonts.css +167 -0
  221. data/rdoc/images/add.png +0 -0
  222. data/rdoc/images/arrow_up.png +0 -0
  223. data/rdoc/images/brick.png +0 -0
  224. data/rdoc/images/brick_link.png +0 -0
  225. data/rdoc/images/bug.png +0 -0
  226. data/rdoc/images/bullet_black.png +0 -0
  227. data/rdoc/images/bullet_toggle_minus.png +0 -0
  228. data/rdoc/images/bullet_toggle_plus.png +0 -0
  229. data/rdoc/images/date.png +0 -0
  230. data/rdoc/images/delete.png +0 -0
  231. data/rdoc/images/find.png +0 -0
  232. data/rdoc/images/loadingAnimation.gif +0 -0
  233. data/rdoc/images/macFFBgHack.png +0 -0
  234. data/rdoc/images/package.png +0 -0
  235. data/rdoc/images/page_green.png +0 -0
  236. data/rdoc/images/page_white_text.png +0 -0
  237. data/rdoc/images/page_white_width.png +0 -0
  238. data/rdoc/images/plugin.png +0 -0
  239. data/rdoc/images/ruby.png +0 -0
  240. data/rdoc/images/tag_blue.png +0 -0
  241. data/rdoc/images/tag_green.png +0 -0
  242. data/rdoc/images/transparent.png +0 -0
  243. data/rdoc/images/wrench.png +0 -0
  244. data/rdoc/images/wrench_orange.png +0 -0
  245. data/rdoc/images/zoom.png +0 -0
  246. data/rdoc/index.html +282 -0
  247. data/rdoc/js/darkfish.js +140 -0
  248. data/rdoc/js/jquery.js +18 -0
  249. data/rdoc/js/navigation.js +142 -0
  250. data/rdoc/js/search.js +109 -0
  251. data/rdoc/js/search_index.js +1 -0
  252. data/rdoc/js/searcher.js +228 -0
  253. data/rdoc/rdoc.css +580 -0
  254. data/rdoc/rubyneat_gemspec.html +387 -0
  255. data/rdoc/table_of_contents.html +2502 -0
  256. data/rdoc/xordebug_log.html +170598 -0
  257. data/rdoc/xorsin_log.html +22569 -0
  258. data/rubyneat.gemspec +347 -0
  259. data/rubyneat.gemspec.orig +375 -0
  260. data/spec/lib/rubyneat/rubyneat_spec.rb +132 -0
  261. metadata +555 -0
@@ -0,0 +1,2212 @@
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+ <!DOCTYPE html>
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+
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+ <html>
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+ <head>
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+ <meta charset="UTF-8">
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+
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+ <title>Controller.html - rubyneat 0.3.4</title>
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+
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+ <link href="../../fonts.css" rel="stylesheet">
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+ <link href="../../rdoc.css" rel="stylesheet">
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+
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+ <script type="text/javascript">
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+ var rdoc_rel_prefix = "../../";
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+ </script>
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+
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+ <script src="../../js/jquery.js"></script>
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+ <script src="../../js/navigation.js"></script>
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+ <script src="../../js/search_index.js"></script>
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+ <script src="../../js/search.js"></script>
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+ <script src="../../js/searcher.js"></script>
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+ <script src="../../js/darkfish.js"></script>
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+ <body id="top" role="document" class="file">
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+ <nav role="navigation">
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+ <div id="project-navigation">
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+ <div id="home-section" role="region" title="Quick navigation" class="nav-section">
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+ <h2>
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+ <a href="../../index.html" rel="home">Home</a>
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+ </h2>
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+
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+ <div id="table-of-contents-navigation">
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+ <a href="../../table_of_contents.html#pages">Pages</a>
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+ <a href="../../table_of_contents.html#classes">Classes</a>
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+ <a href="../../table_of_contents.html#methods">Methods</a>
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+ </div>
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+ </div>
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+ <div id="search-section" role="search" class="project-section initially-hidden">
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+ <form action="#" method="get" accept-charset="utf-8">
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+ <div id="search-field-wrapper">
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+ <input id="search-field" role="combobox" aria-label="Search"
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+ aria-autocomplete="list" aria-controls="search-results"
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+ type="text" name="search" placeholder="Search" spellcheck="false"
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+ title="Type to search, Up and Down to navigate, Enter to load">
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+ </div>
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+ <ul id="search-results" aria-label="Search Results"
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+ aria-busy="false" aria-expanded="false"
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+ aria-atomic="false" class="initially-hidden"></ul>
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+ </form>
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+ </div>
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+ </div>
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+ <div id="project-metadata">
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+ <div id="fileindex-section" class="nav-section">
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+ <h3>Pages</h3>
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+ <ul class="link-list">
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+ <li><a href="../../Gemfile.html">Gemfile</a>
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+ <li><a href="../../Gemfile_lock.html">Gemfile.lock</a>
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+ <li><a href="../../Guardfile.html">Guardfile</a>
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+ <li><a href="../../Rakefile.html">Rakefile</a>
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+ <li><a href="../../doc/ControllerPoint_html.html">ControllerPoint.html</a>
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+ <li><a href="../../doc/CuteA_html.html">CuteA.html</a>
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+ <li><a href="../../doc/CuteB_html.html">CuteB.html</a>
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+ <li><a href="../../doc/DSL_html.html">DSL.html</a>
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+ <li><a href="../../doc/NEAT_html.html">NEAT.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes_html.html">BasicNeuronTypes.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html">BiasNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html">CosineNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/InputNeuron_html.html">InputNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html">SigmoidNeuron.html</a>
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+ <li><a href="../../doc/NEAT/BasicNeuronTypes/SineNeuron_html.html">SineNeuron.html</a>
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+ <li><a href="../../doc/NEAT/Critter_html.html">Critter.html</a>
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+ <li><a href="../../doc/NEAT/Expressor_html.html">Expressor.html</a>
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+ <li><a href="../../doc/NEAT/Graph_html.html">Graph.html</a>
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+ <li><a href="../../doc/NEAT/Graph/DependencyResolver_html.html">DependencyResolver.html</a>
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+ <li><a href="../../doc/NEAT/Graph/GraphException_html.html">GraphException.html</a>
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+ <li><a href="../../doc/NEAT/NeatException_html.html">NeatException.html</a>
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+ <li><a href="../../doc/NEAT/NeatOb_html.html">NeatOb.html</a>
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+ <li><a href="../../doc/NEAT/Neuron_html.html">Neuron.html</a>
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+ <li><a href="../../doc/NEAT/Operator_html.html">Operator.html</a>
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+ <li><a href="../../doc/NEAT/Population_html.html">Population.html</a>
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+ <li><a href="../../doc/class_list_html.html">class_list.html</a>
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+ <li><a href="../../doc/css/common_css.html">common.css</a>
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+ <li><a href="../../doc/css/full_list_css.html">full_list.css</a>
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+ <li><a href="../../doc/css/style_css.html">style.css</a>
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+ <li><a href="../../doc/js/app_js.html">app.js</a>
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+
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+ <li><a href="../../doc/js/full_list_js.html">full_list.js</a>
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+
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+ <li><a href="../../doc/js/jquery_js.html">jquery.js</a>
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+
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+ <li><a href="../../doc/method_list_html.html">method_list.html</a>
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+
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+ <li><a href="../../doc/top-level-namespace_html.html">top-level-namespace.html</a>
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+
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+ <li><a href="../../foo_dump_log.html">foo.dump.log</a>
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+
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+ <li><a href="../../rubyneat_gemspec.html">rubyneat.gemspec</a>
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+
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+ <li><a href="../../xordebug_log.html">xordebug.log</a>
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+
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+ <li><a href="../../xorsin_log.html">xorsin.log</a>
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+
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+ </ul>
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+ </div>
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+
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+ </div>
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+ </nav>
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+
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+ <main role="main" aria-label="Page doc/NEAT/Controller.html">
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+
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+ <p>&lt;!DOCTYPE html PUBLIC “-//W3C//DTD XHTML 1.0 Transitional//EN”</p>
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+
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+ <pre>&quot;http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd&quot;&gt;</pre>
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+
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+ <p>&lt;html xmlns=“<a
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+ href="http://www.w3.org/1999/xhtml">www.w3.org/1999/xhtml</a>”
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+ xml:lang=“en” lang=“en”&gt;</p>
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+
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+ <pre>&lt;head&gt;
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+ &lt;meta http-equiv=&quot;Content-Type&quot; content=&quot;text/html; charset=utf-8&quot; /&gt;</pre>
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+
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+ <p>&lt;title&gt;</p>
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+
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+ <pre>Class: NEAT::Controller
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+
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+ &amp;mdash; Documentation by YARD 0.8.7.3</pre>
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+
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+ <p>&lt;/title&gt;</p>
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+
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+ <pre>&lt;link rel=&quot;stylesheet&quot; href=&quot;../css/style.css&quot; type=&quot;text/css&quot; charset=&quot;utf-8&quot; /&gt;
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+
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+ &lt;link rel=&quot;stylesheet&quot; href=&quot;../css/common.css&quot; type=&quot;text/css&quot; charset=&quot;utf-8&quot; /&gt;</pre>
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+
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+ <p>&lt;script type=“text/javascript” charset=“utf-8”&gt;</p>
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+
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+ <pre>hasFrames = window.top.frames.main ? true : false;
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+ relpath = &#39;../&#39;;
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+ framesUrl = &quot;../frames.html#!&quot; + escape(window.location.href);</pre>
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+
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+ <p>&lt;/script&gt;</p>
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+
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+ <pre>&lt;script type=&quot;text/javascript&quot; charset=&quot;utf-8&quot; src=&quot;../js/jquery.js&quot;&gt;&lt;/script&gt;
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+
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+ &lt;script type=&quot;text/javascript&quot; charset=&quot;utf-8&quot; src=&quot;../js/app.js&quot;&gt;&lt;/script&gt;
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+
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+ &lt;/head&gt;
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+ &lt;body&gt;
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+ &lt;div id=&quot;header&quot;&gt;
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+ &lt;div id=&quot;menu&quot;&gt;
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+
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+ &lt;a href=&quot;../_index.html&quot;&gt;Index (C)&lt;/a&gt; &amp;raquo;
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+ &lt;span class=&#39;title&#39;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NEAT.html&quot; title=&quot;NEAT (module)&quot;&gt;NEAT&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
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+ &amp;raquo;
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+ &lt;span class=&quot;title&quot;&gt;Controller&lt;/span&gt;
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+
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+ &lt;div class=&quot;noframes&quot;&gt;&lt;span class=&quot;title&quot;&gt;(&lt;/span&gt;&lt;a href=&quot;.&quot; target=&quot;_top&quot;&gt;no frames&lt;/a&gt;&lt;span class=&quot;title&quot;&gt;)&lt;/span&gt;&lt;/div&gt;</pre>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre> &lt;div id=&quot;search&quot;&gt;
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+
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+ &lt;a class=&quot;full_list_link&quot; id=&quot;class_list_link&quot;
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+ href=&quot;../class_list.html&quot;&gt;
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+ Class List
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+ &lt;/a&gt;
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+
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+ &lt;a class=&quot;full_list_link&quot; id=&quot;method_list_link&quot;
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+ href=&quot;../method_list.html&quot;&gt;
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+ Method List
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+ &lt;/a&gt;
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+
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+ &lt;a class=&quot;full_list_link&quot; id=&quot;file_list_link&quot;
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+ href=&quot;../file_list.html&quot;&gt;
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+ File List
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+ &lt;/a&gt;</pre>
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+
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+ <p>&lt;/div&gt;</p>
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+
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+ <pre> &lt;div class=&quot;clear&quot;&gt;&lt;/div&gt;
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+ &lt;/div&gt;
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+
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+ &lt;iframe id=&quot;search_frame&quot;&gt;&lt;/iframe&gt;
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+
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+ &lt;div id=&quot;content&quot;&gt;&lt;h1&gt;Class: NEAT::Controller</pre>
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+
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+ <p>&lt;/h1&gt;</p>
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+
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+ <p>&lt;dl class=“box”&gt;</p>
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+
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+ <pre>&lt;dt class=&quot;r1&quot;&gt;Inherits:&lt;/dt&gt;
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+ &lt;dd class=&quot;r1&quot;&gt;
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+ &lt;span class=&quot;inheritName&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
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+
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+ &lt;ul class=&quot;fullTree&quot;&gt;
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+ &lt;li&gt;Object&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/li&gt;
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+
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+ &lt;li class=&quot;next&quot;&gt;NEAT::Controller&lt;/li&gt;
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+
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+ &lt;/ul&gt;
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+ &lt;a href=&quot;#&quot; class=&quot;inheritanceTree&quot;&gt;show all&lt;/a&gt;
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+
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+ &lt;/dd&gt;
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+
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+ &lt;dt class=&quot;r2 last&quot;&gt;Defined in:&lt;/dt&gt;
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+ &lt;dd class=&quot;r2 last&quot;&gt;lib/rubyneat/rubyneat.rb&lt;/dd&gt;</pre>
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+
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+ <p>&lt;/dl&gt; &lt;div class=“clear”&gt;&lt;/div&gt;</p>
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+
278
+ <p>&lt;h2&gt;Overview&lt;/h2&gt;&lt;div class=“docstring”&gt;</p>
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+
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+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
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+
282
+ <p>&lt;h1 id=“label-Controller+for+all+operations+of+RubyNEAT”&gt;Controller
283
+ for all operations of <a href="../../RubyNEAT.html">RubyNEAT</a>&lt;/h1&gt;</p>
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+
285
+ <p>&lt;p&gt;This object contains all the specifications and details for
286
+ evolving and evaluation of the <a href="../../RubyNEAT.html">RubyNEAT</a>
287
+ system. It is a type of “World”, if you will, for the entire
288
+ enterprise.&lt;/p&gt;</p>
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+
290
+ <p>&lt;p&gt;Your application shall only have one Controller.&lt;/p&gt;</p>
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+
292
+ <pre>&lt;/div&gt;</pre>
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+
294
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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+
296
+ <p>&lt;/div&gt;&lt;h2&gt;Defined Under Namespace&lt;/h2&gt; &lt;p
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+ class=“children”&gt;</p>
298
+
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+ <pre>&lt;strong class=&quot;classes&quot;&gt;Classes:&lt;/strong&gt; &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;Controller/NeatSettings.html&quot; title=&quot;NEAT::Controller::NeatSettings (class)&quot;&gt;NeatSettings&lt;/a&gt;&lt;/span&gt;</pre>
300
+
301
+ <p>&lt;/p&gt;</p>
302
+
303
+ <pre>&lt;h2&gt;Instance Attribute Summary &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;&lt;/h2&gt;
304
+ &lt;ul class=&quot;summary&quot;&gt;
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+
306
+ &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
308
+
309
+ &lt;a href=&quot;#compare_func-instance_method&quot; title=&quot;#compare_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;compare_func&lt;/strong&gt; &lt;/a&gt;
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+
311
+ &lt;/span&gt;
312
+
313
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
314
+
315
+ <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
316
+ cost to the fitness scalar.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
317
+
318
+ <p>&lt;/li&gt;</p>
319
+
320
+ <pre> &lt;li class=&quot;public &quot;&gt;
321
+ &lt;span class=&quot;summary_signature&quot;&gt;
322
+
323
+ &lt;a href=&quot;#cost_func-instance_method&quot; title=&quot;#cost_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;cost_func&lt;/strong&gt; &lt;/a&gt;
324
+
325
+ &lt;/span&gt;
326
+
327
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
328
+
329
+ <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
330
+ cost to the fitness scalar.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
331
+
332
+ <p>&lt;/li&gt;</p>
333
+
334
+ <pre> &lt;li class=&quot;public &quot;&gt;
335
+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
337
+ &lt;a href=&quot;#end_run_func-instance_method&quot; title=&quot;#end_run_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;end_run_func&lt;/strong&gt; &lt;/a&gt;
338
+
339
+ &lt;/span&gt;
340
+
341
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
342
+
343
+ <p>&lt;p&gt;End run function to call at the end of each generational run Also
344
+ report_hook to dump reports for the user, etc.&lt;/p&gt;
345
+ &lt;/div&gt;&lt;/span&gt;</p>
346
+
347
+ <p>&lt;/li&gt;</p>
348
+
349
+ <pre> &lt;li class=&quot;public &quot;&gt;
350
+ &lt;span class=&quot;summary_signature&quot;&gt;
351
+
352
+ &lt;a href=&quot;#evaluator-instance_method&quot; title=&quot;#evaluator (instance method)&quot;&gt;- (Object) &lt;strong&gt;evaluator&lt;/strong&gt; &lt;/a&gt;
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+
354
+ &lt;/span&gt;
355
+
356
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
357
+
358
+ <p>&lt;p&gt;Returns the value of attribute evaluator.&lt;/p&gt;
359
+ &lt;/div&gt;&lt;/span&gt;</p>
360
+
361
+ <p>&lt;/li&gt;</p>
362
+
363
+ <pre> &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
365
+
366
+ &lt;a href=&quot;#evaluator_class-instance_method&quot; title=&quot;#evaluator_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;evaluator_class&lt;/strong&gt; &lt;/a&gt;
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+
368
+ &lt;/span&gt;
369
+
370
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
371
+
372
+ <p>&lt;p&gt;Returns the value of attribute evaluator_class.&lt;/p&gt;
373
+ &lt;/div&gt;&lt;/span&gt;</p>
374
+
375
+ <p>&lt;/li&gt;</p>
376
+
377
+ <pre> &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
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+
380
+ &lt;a href=&quot;#evolver-instance_method&quot; title=&quot;#evolver (instance method)&quot;&gt;- (Object) &lt;strong&gt;evolver&lt;/strong&gt; &lt;/a&gt;
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+
382
+ &lt;/span&gt;
383
+
384
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
385
+
386
+ <p>&lt;p&gt;Returns the value of attribute evolver.&lt;/p&gt;
387
+ &lt;/div&gt;&lt;/span&gt;</p>
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+
389
+ <p>&lt;/li&gt;</p>
390
+
391
+ <pre> &lt;li class=&quot;public &quot;&gt;
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+ &lt;span class=&quot;summary_signature&quot;&gt;
393
+
394
+ &lt;a href=&quot;#evolver_class-instance_method&quot; title=&quot;#evolver_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;evolver_class&lt;/strong&gt; &lt;/a&gt;
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+
396
+ &lt;/span&gt;
397
+
398
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
399
+
400
+ <p>&lt;p&gt;Returns the value of attribute evolver_class.&lt;/p&gt;
401
+ &lt;/div&gt;&lt;/span&gt;</p>
402
+
403
+ <p>&lt;/li&gt;</p>
404
+
405
+ <pre> &lt;li class=&quot;public &quot;&gt;
406
+ &lt;span class=&quot;summary_signature&quot;&gt;
407
+
408
+ &lt;a href=&quot;#expressor-instance_method&quot; title=&quot;#expressor (instance method)&quot;&gt;- (Object) &lt;strong&gt;expressor&lt;/strong&gt; &lt;/a&gt;
409
+
410
+ &lt;/span&gt;
411
+
412
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
413
+
414
+ <p>&lt;p&gt;Returns the value of attribute expressor.&lt;/p&gt;
415
+ &lt;/div&gt;&lt;/span&gt;</p>
416
+
417
+ <p>&lt;/li&gt;</p>
418
+
419
+ <pre> &lt;li class=&quot;public &quot;&gt;
420
+ &lt;span class=&quot;summary_signature&quot;&gt;
421
+
422
+ &lt;a href=&quot;#expressor_class-instance_method&quot; title=&quot;#expressor_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;expressor_class&lt;/strong&gt; &lt;/a&gt;
423
+
424
+ &lt;/span&gt;
425
+
426
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
427
+
428
+ <p>&lt;p&gt;Returns the value of attribute expressor_class.&lt;/p&gt;
429
+ &lt;/div&gt;&lt;/span&gt;</p>
430
+
431
+ <p>&lt;/li&gt;</p>
432
+
433
+ <pre> &lt;li class=&quot;public &quot;&gt;
434
+ &lt;span class=&quot;summary_signature&quot;&gt;
435
+
436
+ &lt;a href=&quot;#fitness_func-instance_method&quot; title=&quot;#fitness_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;fitness_func&lt;/strong&gt; &lt;/a&gt;
437
+
438
+ &lt;/span&gt;
439
+
440
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
441
+
442
+ <p>&lt;p&gt;Fitness function that Critters shall be rated on.&lt;/p&gt;
443
+ &lt;/div&gt;&lt;/span&gt;</p>
444
+
445
+ <p>&lt;/li&gt;</p>
446
+
447
+ <pre> &lt;li class=&quot;public &quot;&gt;
448
+ &lt;span class=&quot;summary_signature&quot;&gt;
449
+
450
+ &lt;a href=&quot;#generation_num-instance_method&quot; title=&quot;#generation_num (instance method)&quot;&gt;- (Object) &lt;strong&gt;generation_num&lt;/strong&gt; &lt;/a&gt;
451
+
452
+ &lt;/span&gt;
453
+
454
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
455
+
456
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
457
+
458
+ <p>&lt;p&gt;Current generation count.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
459
+
460
+ <p>&lt;/li&gt;</p>
461
+
462
+ <pre> &lt;li class=&quot;public &quot;&gt;
463
+ &lt;span class=&quot;summary_signature&quot;&gt;
464
+
465
+ &lt;a href=&quot;#glob_innov_num-instance_method&quot; title=&quot;#glob_innov_num (instance method)&quot;&gt;- (Object) &lt;strong&gt;glob_innov_num&lt;/strong&gt; &lt;/a&gt;
466
+
467
+ &lt;/span&gt;
468
+
469
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
470
+
471
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
472
+
473
+ <p>&lt;p&gt;global innovation number.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
474
+
475
+ <p>&lt;/li&gt;</p>
476
+
477
+ <pre> &lt;li class=&quot;public &quot;&gt;
478
+ &lt;span class=&quot;summary_signature&quot;&gt;
479
+
480
+ &lt;a href=&quot;#log-instance_method&quot; title=&quot;#log (instance method)&quot;&gt;- (Object) &lt;strong&gt;log&lt;/strong&gt; &lt;/a&gt;
481
+
482
+ &lt;/span&gt;
483
+
484
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
485
+
486
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
487
+
488
+ <p>&lt;p&gt;Logger object for all of <a
489
+ href="../../RubyNEAT.html">RubyNEAT</a>.&lt;/p&gt;
490
+ &lt;/div&gt;&lt;/span&gt;</p>
491
+
492
+ <p>&lt;/li&gt;</p>
493
+
494
+ <pre> &lt;li class=&quot;public &quot;&gt;
495
+ &lt;span class=&quot;summary_signature&quot;&gt;
496
+
497
+ &lt;a href=&quot;#neural_hidden-instance_method&quot; title=&quot;#neural_hidden (instance method)&quot;&gt;- (Object) &lt;strong&gt;neural_hidden&lt;/strong&gt; &lt;/a&gt;
498
+
499
+ &lt;/span&gt;
500
+
501
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
502
+
503
+ <p>&lt;p&gt;Class map of named input and output neurons (each critter will
504
+ have instantiations of these) name: InputNeuralClass (usually
505
+ InputNeuron).&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
506
+
507
+ <p>&lt;/li&gt;</p>
508
+
509
+ <pre> &lt;li class=&quot;public &quot;&gt;
510
+ &lt;span class=&quot;summary_signature&quot;&gt;
511
+
512
+ &lt;a href=&quot;#neural_inputs-instance_method&quot; title=&quot;#neural_inputs (instance method)&quot;&gt;- (Object) &lt;strong&gt;neural_inputs&lt;/strong&gt; &lt;/a&gt;
513
+
514
+ &lt;/span&gt;
515
+
516
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
517
+
518
+ <p>&lt;p&gt;Class map of named input and output neurons (each critter will
519
+ have instantiations of these) name: InputNeuralClass (usually
520
+ InputNeuron).&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
521
+
522
+ <p>&lt;/li&gt;</p>
523
+
524
+ <pre> &lt;li class=&quot;public &quot;&gt;
525
+ &lt;span class=&quot;summary_signature&quot;&gt;
526
+
527
+ &lt;a href=&quot;#neural_outputs-instance_method&quot; title=&quot;#neural_outputs (instance method)&quot;&gt;- (Object) &lt;strong&gt;neural_outputs&lt;/strong&gt; &lt;/a&gt;
528
+
529
+ &lt;/span&gt;
530
+
531
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
532
+
533
+ <p>&lt;p&gt;Class map of named input and output neurons (each critter will
534
+ have instantiations of these) name: InputNeuralClass (usually
535
+ InputNeuron).&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
536
+
537
+ <p>&lt;/li&gt;</p>
538
+
539
+ <pre> &lt;li class=&quot;public &quot;&gt;
540
+ &lt;span class=&quot;summary_signature&quot;&gt;
541
+
542
+ &lt;a href=&quot;#neuron_catalog-instance_method&quot; title=&quot;#neuron_catalog (instance method)&quot;&gt;- (Object) &lt;strong&gt;neuron_catalog&lt;/strong&gt; &lt;/a&gt;
543
+
544
+ &lt;/span&gt;
545
+
546
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
547
+
548
+ <p>&lt;p&gt;catalog of neurons classes to use { weight =&amp;gt; nclass, …
549
+ }.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
550
+
551
+ <p>&lt;/li&gt;</p>
552
+
553
+ <pre> &lt;li class=&quot;public &quot;&gt;
554
+ &lt;span class=&quot;summary_signature&quot;&gt;
555
+
556
+ &lt;a href=&quot;#parms-instance_method&quot; title=&quot;#parms (instance method)&quot;&gt;- (Object) &lt;strong&gt;parms&lt;/strong&gt; &lt;/a&gt;
557
+
558
+ &lt;/span&gt;
559
+
560
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
561
+
562
+ <p>&lt;p&gt;Parameters for evolution (NeatParameters).&lt;/p&gt;
563
+ &lt;/div&gt;&lt;/span&gt;</p>
564
+
565
+ <p>&lt;/li&gt;</p>
566
+
567
+ <pre> &lt;li class=&quot;public &quot;&gt;
568
+ &lt;span class=&quot;summary_signature&quot;&gt;
569
+
570
+ &lt;a href=&quot;#population-instance_method&quot; title=&quot;#population (instance method)&quot;&gt;- (Object) &lt;strong&gt;population&lt;/strong&gt; &lt;/a&gt;
571
+
572
+ &lt;/span&gt;
573
+
574
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
575
+
576
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
577
+
578
+ <p>&lt;p&gt;population object and class specification.&lt;/p&gt;
579
+ &lt;/div&gt;&lt;/span&gt;</p>
580
+
581
+ <p>&lt;/li&gt;</p>
582
+
583
+ <pre> &lt;li class=&quot;public &quot;&gt;
584
+ &lt;span class=&quot;summary_signature&quot;&gt;
585
+
586
+ &lt;a href=&quot;#population_class-instance_method&quot; title=&quot;#population_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;population_class&lt;/strong&gt; &lt;/a&gt;
587
+
588
+ &lt;/span&gt;
589
+
590
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
591
+
592
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
593
+
594
+ <p>&lt;p&gt;population object and class specification.&lt;/p&gt;
595
+ &lt;/div&gt;&lt;/span&gt;</p>
596
+
597
+ <p>&lt;/li&gt;</p>
598
+
599
+ <pre> &lt;li class=&quot;public &quot;&gt;
600
+ &lt;span class=&quot;summary_signature&quot;&gt;
601
+
602
+ &lt;a href=&quot;#population_history-instance_method&quot; title=&quot;#population_history (instance method)&quot;&gt;- (Object) &lt;strong&gt;population_history&lt;/strong&gt; &lt;/a&gt;
603
+
604
+ &lt;/span&gt;
605
+
606
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
607
+
608
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
609
+
610
+ <p>&lt;p&gt;population object and class specification.&lt;/p&gt;
611
+ &lt;/div&gt;&lt;/span&gt;</p>
612
+
613
+ <p>&lt;/li&gt;</p>
614
+
615
+ <pre> &lt;li class=&quot;public &quot;&gt;
616
+ &lt;span class=&quot;summary_signature&quot;&gt;
617
+
618
+ &lt;a href=&quot;#query_func-instance_method&quot; title=&quot;#query_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;query_func&lt;/strong&gt; &lt;/a&gt;
619
+
620
+ &lt;/span&gt;
621
+
622
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
623
+
624
+ <p>&lt;p&gt;Query function that Critters shall call.&lt;/p&gt;
625
+ &lt;/div&gt;&lt;/span&gt;</p>
626
+
627
+ <p>&lt;/li&gt;</p>
628
+
629
+ <pre> &lt;li class=&quot;public &quot;&gt;
630
+ &lt;span class=&quot;summary_signature&quot;&gt;
631
+
632
+ &lt;a href=&quot;#recurrence_func-instance_method&quot; title=&quot;#recurrence_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;recurrence_func&lt;/strong&gt; &lt;/a&gt;
633
+
634
+ &lt;/span&gt;
635
+
636
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
637
+
638
+ <p>&lt;p&gt;Recurrence function that Critters will yield to.&lt;/p&gt;
639
+ &lt;/div&gt;&lt;/span&gt;</p>
640
+
641
+ <p>&lt;/li&gt;</p>
642
+
643
+ <pre> &lt;li class=&quot;public &quot;&gt;
644
+ &lt;span class=&quot;summary_signature&quot;&gt;
645
+
646
+ &lt;a href=&quot;#report_hook-instance_method&quot; title=&quot;#report_hook (instance method)&quot;&gt;- (Object) &lt;strong&gt;report_hook&lt;/strong&gt; &lt;/a&gt;
647
+
648
+ &lt;/span&gt;
649
+
650
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
651
+
652
+ <p>&lt;p&gt;End run function to call at the end of each generational run Also
653
+ report_hook to dump reports for the user, etc.&lt;/p&gt;
654
+ &lt;/div&gt;&lt;/span&gt;</p>
655
+
656
+ <p>&lt;/li&gt;</p>
657
+
658
+ <pre> &lt;li class=&quot;public &quot;&gt;
659
+ &lt;span class=&quot;summary_signature&quot;&gt;
660
+
661
+ &lt;a href=&quot;#seq_num-instance_method&quot; title=&quot;#seq_num (instance method)&quot;&gt;- (Object) &lt;strong&gt;seq_num&lt;/strong&gt; &lt;/a&gt;
662
+
663
+ &lt;/span&gt;
664
+
665
+ &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
666
+
667
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
668
+
669
+ <p>&lt;p&gt;current sequence number being evaluated.&lt;/p&gt;
670
+ &lt;/div&gt;&lt;/span&gt;</p>
671
+
672
+ <p>&lt;/li&gt;</p>
673
+
674
+ <pre> &lt;li class=&quot;public &quot;&gt;
675
+ &lt;span class=&quot;summary_signature&quot;&gt;
676
+
677
+ &lt;a href=&quot;#stop_on_fit_func-instance_method&quot; title=&quot;#stop_on_fit_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;stop_on_fit_func&lt;/strong&gt; &lt;/a&gt;
678
+
679
+ &lt;/span&gt;
680
+
681
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
682
+
683
+ <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
684
+ cost to the fitness scalar.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
685
+
686
+ <p>&lt;/li&gt;</p>
687
+
688
+ <pre> &lt;li class=&quot;public &quot;&gt;
689
+ &lt;span class=&quot;summary_signature&quot;&gt;
690
+
691
+ &lt;a href=&quot;#verbosity-instance_method&quot; title=&quot;#verbosity (instance method)&quot;&gt;- (Object) &lt;strong&gt;verbosity&lt;/strong&gt; &lt;/a&gt;
692
+
693
+ &lt;/span&gt;
694
+
695
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
696
+
697
+ <p>&lt;p&gt;Global verbosity level: 1 - normal (the default) 2 - really
698
+ verbose 3 - maximally verbose Use in conjunction with log.debug.&lt;/p&gt;
699
+ &lt;/div&gt;&lt;/span&gt;</p>
700
+
701
+ <p>&lt;/li&gt;</p>
702
+
703
+ <pre>&lt;/ul&gt;
704
+
705
+ &lt;h3 class=&quot;inherited&quot;&gt;Attributes inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
706
+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#controller-instance_method&quot; title=&quot;NEAT::NeatOb#controller (method)&quot;&gt;#controller&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#name-instance_method&quot; title=&quot;NEAT::NeatOb#name (method)&quot;&gt;#name&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
707
+
708
+ &lt;h2&gt;
709
+ Instance Method Summary
710
+ &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;
711
+ &lt;/h2&gt;
712
+
713
+ &lt;ul class=&quot;summary&quot;&gt;
714
+
715
+ &lt;li class=&quot;public &quot;&gt;
716
+ &lt;span class=&quot;summary_signature&quot;&gt;
717
+
718
+ &lt;a href=&quot;#gaussian-instance_method&quot; title=&quot;#gaussian (instance method)&quot;&gt;- (Object) &lt;strong&gt;gaussian&lt;/strong&gt; &lt;/a&gt;
719
+
720
+ &lt;/span&gt;
721
+
722
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;&lt;/div&gt;&lt;/span&gt;</pre>
723
+
724
+ <p>&lt;/li&gt;</p>
725
+
726
+ <pre> &lt;li class=&quot;public &quot;&gt;
727
+ &lt;span class=&quot;summary_signature&quot;&gt;
728
+
729
+ &lt;a href=&quot;#initialize-instance_method&quot; title=&quot;#initialize (instance method)&quot;&gt;- (Controller) &lt;strong&gt;initialize&lt;/strong&gt;(neural_inputs: nil, neural_outputs: nil, neural_hidden: nil, parameters: NeatSettings.new, &amp;amp;block) &lt;/a&gt;
730
+
731
+ &lt;/span&gt;
732
+
733
+ &lt;span class=&quot;note title constructor&quot;&gt;constructor&lt;/span&gt;
734
+
735
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;&lt;ul&gt;&lt;li&gt;</pre>
736
+
737
+ <p>&lt;p&gt;neural_inputs – array of input classes - neural_outputs – array of
738
+ output classes - parameters – NeatParameters object, or a path to a YAML
739
+ file to create this.&lt;/p&gt; &lt;/li&gt;&lt;/ul&gt;
740
+ &lt;/div&gt;&lt;/span&gt;</p>
741
+
742
+ <p>&lt;/li&gt;</p>
743
+
744
+ <pre> &lt;li class=&quot;public &quot;&gt;
745
+ &lt;span class=&quot;summary_signature&quot;&gt;
746
+
747
+ &lt;a href=&quot;#new_innovation-instance_method&quot; title=&quot;#new_innovation (instance method)&quot;&gt;- (Object) &lt;strong&gt;new_innovation&lt;/strong&gt; &lt;/a&gt;
748
+
749
+ &lt;/span&gt;
750
+
751
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;&lt;/div&gt;&lt;/span&gt;</pre>
752
+
753
+ <p>&lt;/li&gt;</p>
754
+
755
+ <pre> &lt;li class=&quot;public &quot;&gt;
756
+ &lt;span class=&quot;summary_signature&quot;&gt;
757
+
758
+ &lt;a href=&quot;#run-instance_method&quot; title=&quot;#run (instance method)&quot;&gt;- (Object) &lt;strong&gt;run&lt;/strong&gt; &lt;/a&gt;
759
+
760
+ &lt;/span&gt;
761
+
762
+ &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
763
+
764
+ <p>&lt;p&gt;Run this evolution.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
765
+
766
+ <p>&lt;/li&gt;</p>
767
+
768
+ <pre> &lt;/ul&gt;
769
+
770
+ &lt;h3 class=&quot;inherited&quot;&gt;Methods inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
771
+ &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#log-class_method&quot; title=&quot;NEAT::NeatOb.log (method)&quot;&gt;log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#to_s-instance_method&quot; title=&quot;NEAT::NeatOb#to_s (method)&quot;&gt;#to_s&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
772
+
773
+ &lt;div id=&quot;constructor_details&quot; class=&quot;method_details_list&quot;&gt;
774
+ &lt;h2&gt;Constructor Details&lt;/h2&gt;
775
+
776
+ &lt;div class=&quot;method_details first&quot;&gt;
777
+ &lt;h3 class=&quot;signature first&quot; id=&quot;initialize-instance_method&quot;&gt;
778
+
779
+ - (&lt;tt&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;&quot; title=&quot;NEAT::Controller (class)&quot;&gt;Controller&lt;/a&gt;&lt;/span&gt;&lt;/tt&gt;) &lt;strong&gt;initialize&lt;/strong&gt;(neural_inputs: nil, neural_outputs: nil, neural_hidden: nil, parameters: NeatSettings.new, &amp;amp;block)</pre>
780
+
781
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
782
+
783
+ <pre>&lt;div class=&quot;discussion&quot;&gt;
784
+ &lt;ul&gt;&lt;li&gt;</pre>
785
+
786
+ <p>&lt;p&gt;neural_inputs – array of input classes&lt;/p&gt;
787
+ &lt;/li&gt;&lt;li&gt; &lt;p&gt;neural_outputs – array of output
788
+ classes&lt;/p&gt; &lt;/li&gt;&lt;li&gt; &lt;p&gt;parameters –
789
+ NeatParameters object, or a path to a YAML file to create this.&lt;/p&gt;
790
+ &lt;/li&gt;&lt;/ul&gt;</p>
791
+
792
+ <pre>&lt;/div&gt;</pre>
793
+
794
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
795
+
796
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
797
+
798
+ <pre>&lt;tr&gt;
799
+ &lt;td&gt;
800
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
801
+
802
+ <p>334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352
803
+ 353 354 355 356 357 358 359 360 361 362 363 364 365&lt;/pre&gt;</p>
804
+
805
+ <pre>&lt;/td&gt;
806
+ &lt;td&gt;
807
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 334&lt;/span&gt;</pre>
808
+
809
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
810
+ identifier rubyid_initialize&#39;&gt;initialize&lt;/span&gt;&lt;span
811
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
812
+ class=&#39;label&#39;&gt;neural_inputs:&lt;/span&gt; &lt;span
813
+ class=&#39;kw&#39;&gt;nil&lt;/span&gt;&lt;span
814
+ class=&#39;comma&#39;&gt;,&lt;/span&gt;</p>
815
+
816
+ <pre> &lt;span class=&#39;label&#39;&gt;neural_outputs:&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;nil&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt;
817
+ &lt;span class=&#39;label&#39;&gt;neural_hidden:&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;nil&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt;
818
+ &lt;span class=&#39;label&#39;&gt;parameters:&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NeatSettings&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt;
819
+ &lt;span class=&#39;op&#39;&gt;&amp;amp;&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_block&#39;&gt;block&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;
820
+ &lt;span class=&#39;kw&#39;&gt;super&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;
821
+ &lt;span class=&#39;ivar&#39;&gt;@verbosity&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;int&#39;&gt;1&lt;/span&gt;
822
+ &lt;span class=&#39;ivar&#39;&gt;@glob_innov_num&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;int&#39;&gt;0&lt;/span&gt;
823
+ &lt;span class=&#39;ivar&#39;&gt;@gaussian&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Distribution&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Normal&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_rng&#39;&gt;rng&lt;/span&gt;
824
+ &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span class=&#39;rbracket&#39;&gt;]&lt;/span&gt;
825
+ &lt;span class=&#39;ivar&#39;&gt;@evolver&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Evolver&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;
826
+ &lt;span class=&#39;ivar&#39;&gt;@expressor&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Expressor&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;
827
+
828
+ &lt;span class=&#39;ivar&#39;&gt;@neuron_catalog&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Neuron&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_neuron_types&#39;&gt;neuron_types&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_clone&#39;&gt;clone&lt;/span&gt;
829
+ &lt;span class=&#39;ivar&#39;&gt;@neural_inputs&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_neural_inputs&#39;&gt;neural_inputs&lt;/span&gt;
830
+ &lt;span class=&#39;ivar&#39;&gt;@neural_outputs&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_neural_outputs&#39;&gt;neural_outputs&lt;/span&gt;
831
+ &lt;span class=&#39;ivar&#39;&gt;@neural_hidden&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_neural_hidden&#39;&gt;neural_hidden&lt;/span&gt;
832
+
833
+ &lt;span class=&#39;comment&#39;&gt;# Default classes for population and operators, etc.</pre>
834
+
835
+ <p>&lt;/span&gt; &lt;span
836
+ class=&#39;ivar&#39;&gt;@population_class&lt;/span&gt; &lt;span
837
+ class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span
838
+ class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span
839
+ class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span
840
+ class=&#39;const&#39;&gt;Population&lt;/span&gt;</p>
841
+
842
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@evaluator_class&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Evaluator&lt;/span&gt;
843
+ &lt;span class=&#39;ivar&#39;&gt;@expressor_class&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Expressor&lt;/span&gt;
844
+ &lt;span class=&#39;ivar&#39;&gt;@evolver_class&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Evolver&lt;/span&gt;
845
+
846
+ &lt;span class=&#39;comment&#39;&gt;# Handle the parameters parameter. :-)</pre>
847
+
848
+ <p>&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;
849
+ &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span
850
+ class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;id identifier
851
+ rubyid_parameters&#39;&gt;parameters&lt;/span&gt;&lt;span
852
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
853
+ rubyid_kind_of?&#39;&gt;kind_of?&lt;/span&gt; &lt;span
854
+ class=&#39;const&#39;&gt;String&lt;/span&gt;</p>
855
+
856
+ <pre> &lt;span class=&#39;id identifier rubyid_parameters&#39;&gt;parameters&lt;/span&gt;
857
+ &lt;span class=&#39;kw&#39;&gt;else&lt;/span&gt; &lt;span class=&#39;comment&#39;&gt;# load it from a file</pre>
858
+
859
+ <p>&lt;/span&gt; &lt;span class=&#39;id identifier
860
+ rubyid_open&#39;&gt;open&lt;/span&gt;&lt;span
861
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
862
+ rubyid_parameters&#39;&gt;parameters&lt;/span&gt;&lt;span
863
+ class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span
864
+ class=&#39;tstring&#39;&gt;&lt;span
865
+ class=&#39;tstring_beg&#39;&gt;&amp;#39;&lt;/span&gt;&lt;span
866
+ class=&#39;tstring_content&#39;&gt;r&lt;/span&gt;&lt;span
867
+ class=&#39;tstring_end&#39;&gt;&amp;#39;&lt;/span&gt;&lt;/span&gt;&lt;span
868
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
869
+ class=&#39;lbrace&#39;&gt;{&lt;/span&gt; &lt;span
870
+ class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier
871
+ rubyid_fd&#39;&gt;fd&lt;/span&gt;&lt;span
872
+ class=&#39;op&#39;&gt;|&lt;/span&gt; &lt;span
873
+ class=&#39;const&#39;&gt;YAML&lt;/span&gt;&lt;span
874
+ class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;id identifier
875
+ rubyid_load&#39;&gt;load&lt;/span&gt; &lt;span class=&#39;id identifier
876
+ rubyid_fd&#39;&gt;fd&lt;/span&gt;&lt;span
877
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
878
+ rubyid_read&#39;&gt;read&lt;/span&gt; &lt;span
879
+ class=&#39;rbrace&#39;&gt;}&lt;/span&gt;</p>
880
+
881
+ <pre> &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
882
+ &lt;span class=&#39;id identifier rubyid_block&#39;&gt;block&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_block&#39;&gt;block&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</pre>
883
+
884
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
885
+
886
+ <pre> &lt;/td&gt;
887
+ &lt;/tr&gt;</pre>
888
+
889
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
890
+
891
+ <p>&lt;/div&gt;</p>
892
+
893
+ <pre>&lt;div id=&quot;instance_attr_details&quot; class=&quot;attr_details&quot;&gt;
894
+ &lt;h2&gt;Instance Attribute Details&lt;/h2&gt;
895
+
896
+ &lt;span id=&quot;compare_func=-instance_method&quot;&gt;&lt;/span&gt;
897
+ &lt;div class=&quot;method_details first&quot;&gt;
898
+ &lt;h3 class=&quot;signature first&quot; id=&quot;compare_func-instance_method&quot;&gt;
899
+
900
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;compare_func&lt;/strong&gt;</pre>
901
+
902
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
903
+
904
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
905
+
906
+ <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
907
+ cost to the fitness scalar.&lt;/p&gt;</p>
908
+
909
+ <pre>&lt;/div&gt;</pre>
910
+
911
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
912
+
913
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
914
+
915
+ <pre>&lt;tr&gt;
916
+ &lt;td&gt;
917
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
918
+
919
+ <p>197 198 199&lt;/pre&gt;</p>
920
+
921
+ <pre>&lt;/td&gt;
922
+ &lt;td&gt;
923
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 197&lt;/span&gt;</pre>
924
+
925
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
926
+ identifier rubyid_compare_func&#39;&gt;compare_func&lt;/span&gt;</p>
927
+
928
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@compare_func&lt;/span&gt;</pre>
929
+
930
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
931
+
932
+ <pre> &lt;/td&gt;
933
+ &lt;/tr&gt;</pre>
934
+
935
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
936
+
937
+ <pre> &lt;span id=&quot;cost_func=-instance_method&quot;&gt;&lt;/span&gt;
938
+ &lt;div class=&quot;method_details &quot;&gt;
939
+ &lt;h3 class=&quot;signature &quot; id=&quot;cost_func-instance_method&quot;&gt;
940
+
941
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;cost_func&lt;/strong&gt;</pre>
942
+
943
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
944
+
945
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
946
+
947
+ <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
948
+ cost to the fitness scalar.&lt;/p&gt;</p>
949
+
950
+ <pre>&lt;/div&gt;</pre>
951
+
952
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
953
+
954
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
955
+
956
+ <pre>&lt;tr&gt;
957
+ &lt;td&gt;
958
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
959
+
960
+ <p>197 198 199&lt;/pre&gt;</p>
961
+
962
+ <pre>&lt;/td&gt;
963
+ &lt;td&gt;
964
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 197&lt;/span&gt;</pre>
965
+
966
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
967
+ identifier rubyid_cost_func&#39;&gt;cost_func&lt;/span&gt;</p>
968
+
969
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@cost_func&lt;/span&gt;</pre>
970
+
971
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
972
+
973
+ <pre> &lt;/td&gt;
974
+ &lt;/tr&gt;</pre>
975
+
976
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
977
+
978
+ <pre> &lt;span id=&quot;end_run_func=-instance_method&quot;&gt;&lt;/span&gt;
979
+ &lt;div class=&quot;method_details &quot;&gt;
980
+ &lt;h3 class=&quot;signature &quot; id=&quot;end_run_func-instance_method&quot;&gt;
981
+
982
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;end_run_func&lt;/strong&gt;</pre>
983
+
984
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
985
+
986
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
987
+
988
+ <p>&lt;p&gt;End run function to call at the end of each generational run Also
989
+ report_hook to dump reports for the user, etc.&lt;/p&gt;</p>
990
+
991
+ <pre>&lt;/div&gt;</pre>
992
+
993
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
994
+
995
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
996
+
997
+ <pre>&lt;tr&gt;
998
+ &lt;td&gt;
999
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1000
+
1001
+ <p>201 202 203&lt;/pre&gt;</p>
1002
+
1003
+ <pre>&lt;/td&gt;
1004
+ &lt;td&gt;
1005
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 201&lt;/span&gt;</pre>
1006
+
1007
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1008
+ identifier rubyid_end_run_func&#39;&gt;end_run_func&lt;/span&gt;</p>
1009
+
1010
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@end_run_func&lt;/span&gt;</pre>
1011
+
1012
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1013
+
1014
+ <pre> &lt;/td&gt;
1015
+ &lt;/tr&gt;</pre>
1016
+
1017
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1018
+
1019
+ <pre> &lt;span id=&quot;evaluator=-instance_method&quot;&gt;&lt;/span&gt;
1020
+ &lt;div class=&quot;method_details &quot;&gt;
1021
+ &lt;h3 class=&quot;signature &quot; id=&quot;evaluator-instance_method&quot;&gt;
1022
+
1023
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evaluator&lt;/strong&gt;</pre>
1024
+
1025
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1026
+
1027
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1028
+
1029
+ <p>&lt;p&gt;Returns the value of attribute evaluator&lt;/p&gt;</p>
1030
+
1031
+ <pre>&lt;/div&gt;</pre>
1032
+
1033
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1034
+
1035
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1036
+
1037
+ <pre>&lt;tr&gt;
1038
+ &lt;td&gt;
1039
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1040
+
1041
+ <p>176 177 178&lt;/pre&gt;</p>
1042
+
1043
+ <pre>&lt;/td&gt;
1044
+ &lt;td&gt;
1045
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 176&lt;/span&gt;</pre>
1046
+
1047
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1048
+ identifier rubyid_evaluator&#39;&gt;evaluator&lt;/span&gt;</p>
1049
+
1050
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@evaluator&lt;/span&gt;</pre>
1051
+
1052
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1053
+
1054
+ <pre> &lt;/td&gt;
1055
+ &lt;/tr&gt;</pre>
1056
+
1057
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1058
+
1059
+ <pre> &lt;span id=&quot;evaluator_class=-instance_method&quot;&gt;&lt;/span&gt;
1060
+ &lt;div class=&quot;method_details &quot;&gt;
1061
+ &lt;h3 class=&quot;signature &quot; id=&quot;evaluator_class-instance_method&quot;&gt;
1062
+
1063
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evaluator_class&lt;/strong&gt;</pre>
1064
+
1065
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1066
+
1067
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1068
+
1069
+ <p>&lt;p&gt;Returns the value of attribute evaluator_class&lt;/p&gt;</p>
1070
+
1071
+ <pre>&lt;/div&gt;</pre>
1072
+
1073
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1074
+
1075
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1076
+
1077
+ <pre>&lt;tr&gt;
1078
+ &lt;td&gt;
1079
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1080
+
1081
+ <p>176 177 178&lt;/pre&gt;</p>
1082
+
1083
+ <pre>&lt;/td&gt;
1084
+ &lt;td&gt;
1085
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 176&lt;/span&gt;</pre>
1086
+
1087
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1088
+ identifier rubyid_evaluator_class&#39;&gt;evaluator_class&lt;/span&gt;</p>
1089
+
1090
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@evaluator_class&lt;/span&gt;</pre>
1091
+
1092
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1093
+
1094
+ <pre> &lt;/td&gt;
1095
+ &lt;/tr&gt;</pre>
1096
+
1097
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1098
+
1099
+ <pre> &lt;span id=&quot;evolver=-instance_method&quot;&gt;&lt;/span&gt;
1100
+ &lt;div class=&quot;method_details &quot;&gt;
1101
+ &lt;h3 class=&quot;signature &quot; id=&quot;evolver-instance_method&quot;&gt;
1102
+
1103
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evolver&lt;/strong&gt;</pre>
1104
+
1105
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1106
+
1107
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1108
+
1109
+ <p>&lt;p&gt;Returns the value of attribute evolver&lt;/p&gt;</p>
1110
+
1111
+ <pre>&lt;/div&gt;</pre>
1112
+
1113
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1114
+
1115
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1116
+
1117
+ <pre>&lt;tr&gt;
1118
+ &lt;td&gt;
1119
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1120
+
1121
+ <p>177 178 179&lt;/pre&gt;</p>
1122
+
1123
+ <pre>&lt;/td&gt;
1124
+ &lt;td&gt;
1125
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 177&lt;/span&gt;</pre>
1126
+
1127
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1128
+ identifier rubyid_evolver&#39;&gt;evolver&lt;/span&gt;</p>
1129
+
1130
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@evolver&lt;/span&gt;</pre>
1131
+
1132
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1133
+
1134
+ <pre> &lt;/td&gt;
1135
+ &lt;/tr&gt;</pre>
1136
+
1137
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1138
+
1139
+ <pre> &lt;span id=&quot;evolver_class=-instance_method&quot;&gt;&lt;/span&gt;
1140
+ &lt;div class=&quot;method_details &quot;&gt;
1141
+ &lt;h3 class=&quot;signature &quot; id=&quot;evolver_class-instance_method&quot;&gt;
1142
+
1143
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evolver_class&lt;/strong&gt;</pre>
1144
+
1145
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1146
+
1147
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1148
+
1149
+ <p>&lt;p&gt;Returns the value of attribute evolver_class&lt;/p&gt;</p>
1150
+
1151
+ <pre>&lt;/div&gt;</pre>
1152
+
1153
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1154
+
1155
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1156
+
1157
+ <pre>&lt;tr&gt;
1158
+ &lt;td&gt;
1159
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1160
+
1161
+ <p>177 178 179&lt;/pre&gt;</p>
1162
+
1163
+ <pre>&lt;/td&gt;
1164
+ &lt;td&gt;
1165
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 177&lt;/span&gt;</pre>
1166
+
1167
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1168
+ identifier rubyid_evolver_class&#39;&gt;evolver_class&lt;/span&gt;</p>
1169
+
1170
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@evolver_class&lt;/span&gt;</pre>
1171
+
1172
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1173
+
1174
+ <pre> &lt;/td&gt;
1175
+ &lt;/tr&gt;</pre>
1176
+
1177
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1178
+
1179
+ <pre> &lt;span id=&quot;expressor=-instance_method&quot;&gt;&lt;/span&gt;
1180
+ &lt;div class=&quot;method_details &quot;&gt;
1181
+ &lt;h3 class=&quot;signature &quot; id=&quot;expressor-instance_method&quot;&gt;
1182
+
1183
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;expressor&lt;/strong&gt;</pre>
1184
+
1185
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1186
+
1187
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1188
+
1189
+ <p>&lt;p&gt;Returns the value of attribute expressor&lt;/p&gt;</p>
1190
+
1191
+ <pre>&lt;/div&gt;</pre>
1192
+
1193
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1194
+
1195
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1196
+
1197
+ <pre>&lt;tr&gt;
1198
+ &lt;td&gt;
1199
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1200
+
1201
+ <p>175 176 177&lt;/pre&gt;</p>
1202
+
1203
+ <pre>&lt;/td&gt;
1204
+ &lt;td&gt;
1205
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 175&lt;/span&gt;</pre>
1206
+
1207
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1208
+ identifier rubyid_expressor&#39;&gt;expressor&lt;/span&gt;</p>
1209
+
1210
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@expressor&lt;/span&gt;</pre>
1211
+
1212
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1213
+
1214
+ <pre> &lt;/td&gt;
1215
+ &lt;/tr&gt;</pre>
1216
+
1217
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1218
+
1219
+ <pre> &lt;span id=&quot;expressor_class=-instance_method&quot;&gt;&lt;/span&gt;
1220
+ &lt;div class=&quot;method_details &quot;&gt;
1221
+ &lt;h3 class=&quot;signature &quot; id=&quot;expressor_class-instance_method&quot;&gt;
1222
+
1223
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;expressor_class&lt;/strong&gt;</pre>
1224
+
1225
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1226
+
1227
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1228
+
1229
+ <p>&lt;p&gt;Returns the value of attribute expressor_class&lt;/p&gt;</p>
1230
+
1231
+ <pre>&lt;/div&gt;</pre>
1232
+
1233
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1234
+
1235
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1236
+
1237
+ <pre>&lt;tr&gt;
1238
+ &lt;td&gt;
1239
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1240
+
1241
+ <p>175 176 177&lt;/pre&gt;</p>
1242
+
1243
+ <pre>&lt;/td&gt;
1244
+ &lt;td&gt;
1245
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 175&lt;/span&gt;</pre>
1246
+
1247
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1248
+ identifier rubyid_expressor_class&#39;&gt;expressor_class&lt;/span&gt;</p>
1249
+
1250
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@expressor_class&lt;/span&gt;</pre>
1251
+
1252
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1253
+
1254
+ <pre> &lt;/td&gt;
1255
+ &lt;/tr&gt;</pre>
1256
+
1257
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1258
+
1259
+ <pre> &lt;span id=&quot;fitness_func=-instance_method&quot;&gt;&lt;/span&gt;
1260
+ &lt;div class=&quot;method_details &quot;&gt;
1261
+ &lt;h3 class=&quot;signature &quot; id=&quot;fitness_func-instance_method&quot;&gt;
1262
+
1263
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;fitness_func&lt;/strong&gt;</pre>
1264
+
1265
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1266
+
1267
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1268
+
1269
+ <p>&lt;p&gt;Fitness function that Critters shall be rated on.&lt;/p&gt;</p>
1270
+
1271
+ <pre>&lt;/div&gt;</pre>
1272
+
1273
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1274
+
1275
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1276
+
1277
+ <pre>&lt;tr&gt;
1278
+ &lt;td&gt;
1279
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1280
+
1281
+ <p>190 191 192&lt;/pre&gt;</p>
1282
+
1283
+ <pre>&lt;/td&gt;
1284
+ &lt;td&gt;
1285
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 190&lt;/span&gt;</pre>
1286
+
1287
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1288
+ identifier rubyid_fitness_func&#39;&gt;fitness_func&lt;/span&gt;</p>
1289
+
1290
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@fitness_func&lt;/span&gt;</pre>
1291
+
1292
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1293
+
1294
+ <pre> &lt;/td&gt;
1295
+ &lt;/tr&gt;</pre>
1296
+
1297
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1298
+
1299
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1300
+ &lt;div class=&quot;method_details &quot;&gt;
1301
+ &lt;h3 class=&quot;signature &quot; id=&quot;generation_num-instance_method&quot;&gt;
1302
+
1303
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;generation_num&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1304
+
1305
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1306
+
1307
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1308
+
1309
+ <p>&lt;p&gt;Current generation count&lt;/p&gt;</p>
1310
+
1311
+ <pre>&lt;/div&gt;</pre>
1312
+
1313
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1314
+
1315
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1316
+
1317
+ <pre>&lt;tr&gt;
1318
+ &lt;td&gt;
1319
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1320
+
1321
+ <p>160 161 162&lt;/pre&gt;</p>
1322
+
1323
+ <pre>&lt;/td&gt;
1324
+ &lt;td&gt;
1325
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 160&lt;/span&gt;</pre>
1326
+
1327
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1328
+ identifier rubyid_generation_num&#39;&gt;generation_num&lt;/span&gt;</p>
1329
+
1330
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@generation_num&lt;/span&gt;</pre>
1331
+
1332
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1333
+
1334
+ <pre> &lt;/td&gt;
1335
+ &lt;/tr&gt;</pre>
1336
+
1337
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1338
+
1339
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1340
+ &lt;div class=&quot;method_details &quot;&gt;
1341
+ &lt;h3 class=&quot;signature &quot; id=&quot;glob_innov_num-instance_method&quot;&gt;
1342
+
1343
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;glob_innov_num&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1344
+
1345
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1346
+
1347
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1348
+
1349
+ <p>&lt;p&gt;global innovation number&lt;/p&gt;</p>
1350
+
1351
+ <pre>&lt;/div&gt;</pre>
1352
+
1353
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1354
+
1355
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1356
+
1357
+ <pre>&lt;tr&gt;
1358
+ &lt;td&gt;
1359
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1360
+
1361
+ <p>154 155 156&lt;/pre&gt;</p>
1362
+
1363
+ <pre>&lt;/td&gt;
1364
+ &lt;td&gt;
1365
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 154&lt;/span&gt;</pre>
1366
+
1367
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1368
+ identifier rubyid_glob_innov_num&#39;&gt;glob_innov_num&lt;/span&gt;</p>
1369
+
1370
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@glob_innov_num&lt;/span&gt;</pre>
1371
+
1372
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1373
+
1374
+ <pre> &lt;/td&gt;
1375
+ &lt;/tr&gt;</pre>
1376
+
1377
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1378
+
1379
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1380
+ &lt;div class=&quot;method_details &quot;&gt;
1381
+ &lt;h3 class=&quot;signature &quot; id=&quot;log-instance_method&quot;&gt;
1382
+
1383
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;log&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1384
+
1385
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1386
+
1387
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1388
+
1389
+ <p>&lt;p&gt;Logger object for all of <a
1390
+ href="../../RubyNEAT.html">RubyNEAT</a>&lt;/p&gt;</p>
1391
+
1392
+ <pre>&lt;/div&gt;</pre>
1393
+
1394
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1395
+
1396
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1397
+
1398
+ <pre>&lt;tr&gt;
1399
+ &lt;td&gt;
1400
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1401
+
1402
+ <p>204 205 206&lt;/pre&gt;</p>
1403
+
1404
+ <pre>&lt;/td&gt;
1405
+ &lt;td&gt;
1406
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 204&lt;/span&gt;</pre>
1407
+
1408
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1409
+ identifier rubyid_log&#39;&gt;log&lt;/span&gt;</p>
1410
+
1411
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@log&lt;/span&gt;</pre>
1412
+
1413
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1414
+
1415
+ <pre> &lt;/td&gt;
1416
+ &lt;/tr&gt;</pre>
1417
+
1418
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1419
+
1420
+ <pre> &lt;span id=&quot;neural_hidden=-instance_method&quot;&gt;&lt;/span&gt;
1421
+ &lt;div class=&quot;method_details &quot;&gt;
1422
+ &lt;h3 class=&quot;signature &quot; id=&quot;neural_hidden-instance_method&quot;&gt;
1423
+
1424
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neural_hidden&lt;/strong&gt;</pre>
1425
+
1426
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1427
+
1428
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1429
+
1430
+ <p>&lt;p&gt;Class map of named input and output neurons (each critter will
1431
+ have instantiations of these) name: InputNeuralClass (usually
1432
+ InputNeuron)&lt;/p&gt;</p>
1433
+
1434
+ <pre>&lt;/div&gt;</pre>
1435
+
1436
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1437
+
1438
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1439
+
1440
+ <pre>&lt;tr&gt;
1441
+ &lt;td&gt;
1442
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1443
+
1444
+ <p>167 168 169&lt;/pre&gt;</p>
1445
+
1446
+ <pre>&lt;/td&gt;
1447
+ &lt;td&gt;
1448
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 167&lt;/span&gt;</pre>
1449
+
1450
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1451
+ identifier rubyid_neural_hidden&#39;&gt;neural_hidden&lt;/span&gt;</p>
1452
+
1453
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@neural_hidden&lt;/span&gt;</pre>
1454
+
1455
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1456
+
1457
+ <pre> &lt;/td&gt;
1458
+ &lt;/tr&gt;</pre>
1459
+
1460
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1461
+
1462
+ <pre> &lt;span id=&quot;neural_inputs=-instance_method&quot;&gt;&lt;/span&gt;
1463
+ &lt;div class=&quot;method_details &quot;&gt;
1464
+ &lt;h3 class=&quot;signature &quot; id=&quot;neural_inputs-instance_method&quot;&gt;
1465
+
1466
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neural_inputs&lt;/strong&gt;</pre>
1467
+
1468
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1469
+
1470
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1471
+
1472
+ <p>&lt;p&gt;Class map of named input and output neurons (each critter will
1473
+ have instantiations of these) name: InputNeuralClass (usually
1474
+ InputNeuron)&lt;/p&gt;</p>
1475
+
1476
+ <pre>&lt;/div&gt;</pre>
1477
+
1478
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1479
+
1480
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1481
+
1482
+ <pre>&lt;tr&gt;
1483
+ &lt;td&gt;
1484
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1485
+
1486
+ <p>167 168 169&lt;/pre&gt;</p>
1487
+
1488
+ <pre>&lt;/td&gt;
1489
+ &lt;td&gt;
1490
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 167&lt;/span&gt;</pre>
1491
+
1492
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1493
+ identifier rubyid_neural_inputs&#39;&gt;neural_inputs&lt;/span&gt;</p>
1494
+
1495
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@neural_inputs&lt;/span&gt;</pre>
1496
+
1497
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1498
+
1499
+ <pre> &lt;/td&gt;
1500
+ &lt;/tr&gt;</pre>
1501
+
1502
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1503
+
1504
+ <pre> &lt;span id=&quot;neural_outputs=-instance_method&quot;&gt;&lt;/span&gt;
1505
+ &lt;div class=&quot;method_details &quot;&gt;
1506
+ &lt;h3 class=&quot;signature &quot; id=&quot;neural_outputs-instance_method&quot;&gt;
1507
+
1508
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neural_outputs&lt;/strong&gt;</pre>
1509
+
1510
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1511
+
1512
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1513
+
1514
+ <p>&lt;p&gt;Class map of named input and output neurons (each critter will
1515
+ have instantiations of these) name: InputNeuralClass (usually
1516
+ InputNeuron)&lt;/p&gt;</p>
1517
+
1518
+ <pre>&lt;/div&gt;</pre>
1519
+
1520
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1521
+
1522
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1523
+
1524
+ <pre>&lt;tr&gt;
1525
+ &lt;td&gt;
1526
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1527
+
1528
+ <p>167 168 169&lt;/pre&gt;</p>
1529
+
1530
+ <pre>&lt;/td&gt;
1531
+ &lt;td&gt;
1532
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 167&lt;/span&gt;</pre>
1533
+
1534
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1535
+ identifier rubyid_neural_outputs&#39;&gt;neural_outputs&lt;/span&gt;</p>
1536
+
1537
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@neural_outputs&lt;/span&gt;</pre>
1538
+
1539
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1540
+
1541
+ <pre> &lt;/td&gt;
1542
+ &lt;/tr&gt;</pre>
1543
+
1544
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1545
+
1546
+ <pre> &lt;span id=&quot;neuron_catalog=-instance_method&quot;&gt;&lt;/span&gt;
1547
+ &lt;div class=&quot;method_details &quot;&gt;
1548
+ &lt;h3 class=&quot;signature &quot; id=&quot;neuron_catalog-instance_method&quot;&gt;
1549
+
1550
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neuron_catalog&lt;/strong&gt;</pre>
1551
+
1552
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1553
+
1554
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1555
+
1556
+ <p>&lt;p&gt;catalog of neurons classes to use { weight =&amp;gt; nclass, …
1557
+ }&lt;/p&gt;</p>
1558
+
1559
+ <pre>&lt;/div&gt;</pre>
1560
+
1561
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1562
+
1563
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1564
+
1565
+ <pre>&lt;tr&gt;
1566
+ &lt;td&gt;
1567
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1568
+
1569
+ <p>163 164 165&lt;/pre&gt;</p>
1570
+
1571
+ <pre>&lt;/td&gt;
1572
+ &lt;td&gt;
1573
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 163&lt;/span&gt;</pre>
1574
+
1575
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1576
+ identifier rubyid_neuron_catalog&#39;&gt;neuron_catalog&lt;/span&gt;</p>
1577
+
1578
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@neuron_catalog&lt;/span&gt;</pre>
1579
+
1580
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1581
+
1582
+ <pre> &lt;/td&gt;
1583
+ &lt;/tr&gt;</pre>
1584
+
1585
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1586
+
1587
+ <pre> &lt;span id=&quot;parms=-instance_method&quot;&gt;&lt;/span&gt;
1588
+ &lt;div class=&quot;method_details &quot;&gt;
1589
+ &lt;h3 class=&quot;signature &quot; id=&quot;parms-instance_method&quot;&gt;
1590
+
1591
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;parms&lt;/strong&gt;</pre>
1592
+
1593
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1594
+
1595
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1596
+
1597
+ <p>&lt;p&gt;Parameters for evolution (NeatParameters)&lt;/p&gt;</p>
1598
+
1599
+ <pre>&lt;/div&gt;</pre>
1600
+
1601
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1602
+
1603
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1604
+
1605
+ <pre>&lt;tr&gt;
1606
+ &lt;td&gt;
1607
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1608
+
1609
+ <p>170 171 172&lt;/pre&gt;</p>
1610
+
1611
+ <pre>&lt;/td&gt;
1612
+ &lt;td&gt;
1613
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 170&lt;/span&gt;</pre>
1614
+
1615
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1616
+ identifier rubyid_parms&#39;&gt;parms&lt;/span&gt;</p>
1617
+
1618
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;</pre>
1619
+
1620
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1621
+
1622
+ <pre> &lt;/td&gt;
1623
+ &lt;/tr&gt;</pre>
1624
+
1625
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1626
+
1627
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1628
+ &lt;div class=&quot;method_details &quot;&gt;
1629
+ &lt;h3 class=&quot;signature &quot; id=&quot;population-instance_method&quot;&gt;
1630
+
1631
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;population&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1632
+
1633
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1634
+
1635
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1636
+
1637
+ <p>&lt;p&gt;population object and class specification&lt;/p&gt;</p>
1638
+
1639
+ <pre>&lt;/div&gt;</pre>
1640
+
1641
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1642
+
1643
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1644
+
1645
+ <pre>&lt;tr&gt;
1646
+ &lt;td&gt;
1647
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1648
+
1649
+ <p>173 174 175&lt;/pre&gt;</p>
1650
+
1651
+ <pre>&lt;/td&gt;
1652
+ &lt;td&gt;
1653
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 173&lt;/span&gt;</pre>
1654
+
1655
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1656
+ identifier rubyid_population&#39;&gt;population&lt;/span&gt;</p>
1657
+
1658
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;</pre>
1659
+
1660
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1661
+
1662
+ <pre> &lt;/td&gt;
1663
+ &lt;/tr&gt;</pre>
1664
+
1665
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1666
+
1667
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1668
+ &lt;div class=&quot;method_details &quot;&gt;
1669
+ &lt;h3 class=&quot;signature &quot; id=&quot;population_class-instance_method&quot;&gt;
1670
+
1671
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;population_class&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1672
+
1673
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1674
+
1675
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1676
+
1677
+ <p>&lt;p&gt;population object and class specification&lt;/p&gt;</p>
1678
+
1679
+ <pre>&lt;/div&gt;</pre>
1680
+
1681
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1682
+
1683
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1684
+
1685
+ <pre>&lt;tr&gt;
1686
+ &lt;td&gt;
1687
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1688
+
1689
+ <p>173 174 175&lt;/pre&gt;</p>
1690
+
1691
+ <pre>&lt;/td&gt;
1692
+ &lt;td&gt;
1693
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 173&lt;/span&gt;</pre>
1694
+
1695
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1696
+ identifier rubyid_population_class&#39;&gt;population_class&lt;/span&gt;</p>
1697
+
1698
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@population_class&lt;/span&gt;</pre>
1699
+
1700
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1701
+
1702
+ <pre> &lt;/td&gt;
1703
+ &lt;/tr&gt;</pre>
1704
+
1705
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1706
+
1707
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1708
+ &lt;div class=&quot;method_details &quot;&gt;
1709
+ &lt;h3 class=&quot;signature &quot; id=&quot;population_history-instance_method&quot;&gt;
1710
+
1711
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;population_history&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1712
+
1713
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1714
+
1715
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1716
+
1717
+ <p>&lt;p&gt;population object and class specification&lt;/p&gt;</p>
1718
+
1719
+ <pre>&lt;/div&gt;</pre>
1720
+
1721
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1722
+
1723
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1724
+
1725
+ <pre>&lt;tr&gt;
1726
+ &lt;td&gt;
1727
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1728
+
1729
+ <p>173 174 175&lt;/pre&gt;</p>
1730
+
1731
+ <pre>&lt;/td&gt;
1732
+ &lt;td&gt;
1733
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 173&lt;/span&gt;</pre>
1734
+
1735
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1736
+ identifier
1737
+ rubyid_population_history&#39;&gt;population_history&lt;/span&gt;</p>
1738
+
1739
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt;</pre>
1740
+
1741
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1742
+
1743
+ <pre> &lt;/td&gt;
1744
+ &lt;/tr&gt;</pre>
1745
+
1746
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1747
+
1748
+ <pre> &lt;span id=&quot;query_func=-instance_method&quot;&gt;&lt;/span&gt;
1749
+ &lt;div class=&quot;method_details &quot;&gt;
1750
+ &lt;h3 class=&quot;signature &quot; id=&quot;query_func-instance_method&quot;&gt;
1751
+
1752
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;query_func&lt;/strong&gt;</pre>
1753
+
1754
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1755
+
1756
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1757
+
1758
+ <p>&lt;p&gt;Query function that Critters shall call.&lt;/p&gt;</p>
1759
+
1760
+ <pre>&lt;/div&gt;</pre>
1761
+
1762
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1763
+
1764
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1765
+
1766
+ <pre>&lt;tr&gt;
1767
+ &lt;td&gt;
1768
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1769
+
1770
+ <p>187 188 189&lt;/pre&gt;</p>
1771
+
1772
+ <pre>&lt;/td&gt;
1773
+ &lt;td&gt;
1774
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 187&lt;/span&gt;</pre>
1775
+
1776
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1777
+ identifier rubyid_query_func&#39;&gt;query_func&lt;/span&gt;</p>
1778
+
1779
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@query_func&lt;/span&gt;</pre>
1780
+
1781
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1782
+
1783
+ <pre> &lt;/td&gt;
1784
+ &lt;/tr&gt;</pre>
1785
+
1786
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1787
+
1788
+ <pre> &lt;span id=&quot;recurrence_func=-instance_method&quot;&gt;&lt;/span&gt;
1789
+ &lt;div class=&quot;method_details &quot;&gt;
1790
+ &lt;h3 class=&quot;signature &quot; id=&quot;recurrence_func-instance_method&quot;&gt;
1791
+
1792
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;recurrence_func&lt;/strong&gt;</pre>
1793
+
1794
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1795
+
1796
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1797
+
1798
+ <p>&lt;p&gt;Recurrence function that Critters will yield to.&lt;/p&gt;</p>
1799
+
1800
+ <pre>&lt;/div&gt;</pre>
1801
+
1802
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1803
+
1804
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1805
+
1806
+ <pre>&lt;tr&gt;
1807
+ &lt;td&gt;
1808
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1809
+
1810
+ <p>193 194 195&lt;/pre&gt;</p>
1811
+
1812
+ <pre>&lt;/td&gt;
1813
+ &lt;td&gt;
1814
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 193&lt;/span&gt;</pre>
1815
+
1816
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1817
+ identifier rubyid_recurrence_func&#39;&gt;recurrence_func&lt;/span&gt;</p>
1818
+
1819
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@recurrence_func&lt;/span&gt;</pre>
1820
+
1821
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1822
+
1823
+ <pre> &lt;/td&gt;
1824
+ &lt;/tr&gt;</pre>
1825
+
1826
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1827
+
1828
+ <pre> &lt;span id=&quot;report_hook=-instance_method&quot;&gt;&lt;/span&gt;
1829
+ &lt;div class=&quot;method_details &quot;&gt;
1830
+ &lt;h3 class=&quot;signature &quot; id=&quot;report_hook-instance_method&quot;&gt;
1831
+
1832
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;report_hook&lt;/strong&gt;</pre>
1833
+
1834
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1835
+
1836
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1837
+
1838
+ <p>&lt;p&gt;End run function to call at the end of each generational run Also
1839
+ report_hook to dump reports for the user, etc.&lt;/p&gt;</p>
1840
+
1841
+ <pre>&lt;/div&gt;</pre>
1842
+
1843
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1844
+
1845
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1846
+
1847
+ <pre>&lt;tr&gt;
1848
+ &lt;td&gt;
1849
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1850
+
1851
+ <p>201 202 203&lt;/pre&gt;</p>
1852
+
1853
+ <pre>&lt;/td&gt;
1854
+ &lt;td&gt;
1855
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 201&lt;/span&gt;</pre>
1856
+
1857
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1858
+ identifier rubyid_report_hook&#39;&gt;report_hook&lt;/span&gt;</p>
1859
+
1860
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@report_hook&lt;/span&gt;</pre>
1861
+
1862
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1863
+
1864
+ <pre> &lt;/td&gt;
1865
+ &lt;/tr&gt;</pre>
1866
+
1867
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1868
+
1869
+ <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1870
+ &lt;div class=&quot;method_details &quot;&gt;
1871
+ &lt;h3 class=&quot;signature &quot; id=&quot;seq_num-instance_method&quot;&gt;
1872
+
1873
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;seq_num&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1874
+
1875
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1876
+
1877
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1878
+
1879
+ <p>&lt;p&gt;current sequence number being evaluated&lt;/p&gt;</p>
1880
+
1881
+ <pre>&lt;/div&gt;</pre>
1882
+
1883
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1884
+
1885
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1886
+
1887
+ <pre>&lt;tr&gt;
1888
+ &lt;td&gt;
1889
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1890
+
1891
+ <p>157 158 159&lt;/pre&gt;</p>
1892
+
1893
+ <pre>&lt;/td&gt;
1894
+ &lt;td&gt;
1895
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 157&lt;/span&gt;</pre>
1896
+
1897
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1898
+ identifier rubyid_seq_num&#39;&gt;seq_num&lt;/span&gt;</p>
1899
+
1900
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@seq_num&lt;/span&gt;</pre>
1901
+
1902
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1903
+
1904
+ <pre> &lt;/td&gt;
1905
+ &lt;/tr&gt;</pre>
1906
+
1907
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1908
+
1909
+ <pre> &lt;span id=&quot;stop_on_fit_func=-instance_method&quot;&gt;&lt;/span&gt;
1910
+ &lt;div class=&quot;method_details &quot;&gt;
1911
+ &lt;h3 class=&quot;signature &quot; id=&quot;stop_on_fit_func-instance_method&quot;&gt;
1912
+
1913
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;stop_on_fit_func&lt;/strong&gt;</pre>
1914
+
1915
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1916
+
1917
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1918
+
1919
+ <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
1920
+ cost to the fitness scalar.&lt;/p&gt;</p>
1921
+
1922
+ <pre>&lt;/div&gt;</pre>
1923
+
1924
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1925
+
1926
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1927
+
1928
+ <pre>&lt;tr&gt;
1929
+ &lt;td&gt;
1930
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1931
+
1932
+ <p>197 198 199&lt;/pre&gt;</p>
1933
+
1934
+ <pre>&lt;/td&gt;
1935
+ &lt;td&gt;
1936
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 197&lt;/span&gt;</pre>
1937
+
1938
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1939
+ identifier rubyid_stop_on_fit_func&#39;&gt;stop_on_fit_func&lt;/span&gt;</p>
1940
+
1941
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@stop_on_fit_func&lt;/span&gt;</pre>
1942
+
1943
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1944
+
1945
+ <pre> &lt;/td&gt;
1946
+ &lt;/tr&gt;</pre>
1947
+
1948
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1949
+
1950
+ <pre> &lt;span id=&quot;verbosity=-instance_method&quot;&gt;&lt;/span&gt;
1951
+ &lt;div class=&quot;method_details &quot;&gt;
1952
+ &lt;h3 class=&quot;signature &quot; id=&quot;verbosity-instance_method&quot;&gt;
1953
+
1954
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;verbosity&lt;/strong&gt;</pre>
1955
+
1956
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1957
+
1958
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1959
+
1960
+ <p>&lt;p&gt;Global verbosity level: 1 - normal (the default) 2 - really
1961
+ verbose 3 - maximally verbose Use in conjunction with log.debug&lt;/p&gt;</p>
1962
+
1963
+ <pre>&lt;/div&gt;</pre>
1964
+
1965
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1966
+
1967
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1968
+
1969
+ <pre>&lt;tr&gt;
1970
+ &lt;td&gt;
1971
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
1972
+
1973
+ <p>184 185 186&lt;/pre&gt;</p>
1974
+
1975
+ <pre>&lt;/td&gt;
1976
+ &lt;td&gt;
1977
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 184&lt;/span&gt;</pre>
1978
+
1979
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1980
+ identifier rubyid_verbosity&#39;&gt;verbosity&lt;/span&gt;</p>
1981
+
1982
+ <pre>&lt;span class=&#39;ivar&#39;&gt;@verbosity&lt;/span&gt;</pre>
1983
+
1984
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1985
+
1986
+ <pre> &lt;/td&gt;
1987
+ &lt;/tr&gt;</pre>
1988
+
1989
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
1990
+
1991
+ <pre>&lt;/div&gt;
1992
+
1993
+ &lt;div id=&quot;instance_method_details&quot; class=&quot;method_details_list&quot;&gt;
1994
+ &lt;h2&gt;Instance Method Details&lt;/h2&gt;
1995
+
1996
+ &lt;div class=&quot;method_details first&quot;&gt;
1997
+ &lt;h3 class=&quot;signature first&quot; id=&quot;gaussian-instance_method&quot;&gt;
1998
+
1999
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;gaussian&lt;/strong&gt;</pre>
2000
+
2001
+ <p>&lt;/h3&gt;&lt;table class=“source_code”&gt;</p>
2002
+
2003
+ <pre>&lt;tr&gt;
2004
+ &lt;td&gt;
2005
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
2006
+
2007
+ <p>368&lt;/pre&gt;</p>
2008
+
2009
+ <pre>&lt;/td&gt;
2010
+ &lt;td&gt;
2011
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 368&lt;/span&gt;</pre>
2012
+
2013
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
2014
+ identifier rubyid_gaussian&#39;&gt;gaussian&lt;/span&gt; &lt;span
2015
+ class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2016
+ class=&#39;ivar&#39;&gt;@gaussian&lt;/span&gt;&lt;span
2017
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2018
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2019
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2020
+ class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2021
+ class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
2022
+
2023
+ <pre> &lt;/td&gt;
2024
+ &lt;/tr&gt;</pre>
2025
+
2026
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
2027
+
2028
+ <pre> &lt;div class=&quot;method_details &quot;&gt;
2029
+ &lt;h3 class=&quot;signature &quot; id=&quot;new_innovation-instance_method&quot;&gt;
2030
+
2031
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;new_innovation&lt;/strong&gt;</pre>
2032
+
2033
+ <p>&lt;/h3&gt;&lt;table class=“source_code”&gt;</p>
2034
+
2035
+ <pre>&lt;tr&gt;
2036
+ &lt;td&gt;
2037
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
2038
+
2039
+ <p>367&lt;/pre&gt;</p>
2040
+
2041
+ <pre>&lt;/td&gt;
2042
+ &lt;td&gt;
2043
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 367&lt;/span&gt;</pre>
2044
+
2045
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
2046
+ identifier rubyid_new_innovation&#39;&gt;new_innovation&lt;/span&gt;
2047
+ &lt;span class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2048
+ class=&#39;ivar&#39;&gt;@glob_innov_num&lt;/span&gt; &lt;span
2049
+ class=&#39;op&#39;&gt;+=&lt;/span&gt; &lt;span
2050
+ class=&#39;int&#39;&gt;1&lt;/span&gt;&lt;span
2051
+ class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2052
+ class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
2053
+
2054
+ <pre> &lt;/td&gt;
2055
+ &lt;/tr&gt;</pre>
2056
+
2057
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
2058
+
2059
+ <pre> &lt;div class=&quot;method_details &quot;&gt;
2060
+ &lt;h3 class=&quot;signature &quot; id=&quot;run-instance_method&quot;&gt;
2061
+
2062
+ - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;run&lt;/strong&gt;</pre>
2063
+
2064
+ <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
2065
+
2066
+ <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
2067
+
2068
+ <p>&lt;p&gt;Run this evolution.&lt;/p&gt;</p>
2069
+
2070
+ <pre>&lt;/div&gt;</pre>
2071
+
2072
+ <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
2073
+
2074
+ <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
2075
+
2076
+ <pre>&lt;tr&gt;
2077
+ &lt;td&gt;
2078
+ &lt;pre class=&quot;lines&quot;&gt;</pre>
2079
+
2080
+ <p>371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389
2081
+ 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408
2082
+ 409 410 411&lt;/pre&gt;</p>
2083
+
2084
+ <pre>&lt;/td&gt;
2085
+ &lt;td&gt;
2086
+ &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 371&lt;/span&gt;</pre>
2087
+
2088
+ <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
2089
+ identifier rubyid_run&#39;&gt;run&lt;/span&gt;</p>
2090
+
2091
+ <pre>&lt;span class=&#39;id identifier rubyid_pre_run_initialize&#39;&gt;pre_run_initialize&lt;/span&gt;
2092
+ &lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;int&#39;&gt;1&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;..&lt;/span&gt;&lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_max_generations&#39;&gt;max_generations&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_gen_number&#39;&gt;gen_number&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
2093
+ &lt;span class=&#39;ivar&#39;&gt;@generation_num&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_gen_number&#39;&gt;gen_number&lt;/span&gt;
2094
+ &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;lt;&amp;lt;&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_nil?&#39;&gt;nil?&lt;/span&gt;
2095
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;
2096
+ &lt;span class=&#39;kw&#39;&gt;else&lt;/span&gt;
2097
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population_class&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;
2098
+ &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
2099
+ &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_shift&#39;&gt;shift&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_size&#39;&gt;size&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;lt;=&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_max_population_history&#39;&gt;max_population_history&lt;/span&gt;
2100
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_mutate!&#39;&gt;mutate!&lt;/span&gt;
2101
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_express!&#39;&gt;express!&lt;/span&gt;
2102
+
2103
+ &lt;span class=&#39;comment&#39;&gt;## Evaluate population</pre>
2104
+
2105
+ <p>&lt;/span&gt; &lt;span
2106
+ class=&#39;ivar&#39;&gt;@evaluator&lt;/span&gt;&lt;span
2107
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2108
+ rubyid_ready_for_evaluation&#39;&gt;ready_for_evaluation&lt;/span&gt;
2109
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;</p>
2110
+
2111
+ <pre>&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_start_sequence_at&#39;&gt;start_sequence_at&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;..&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_end_sequence_at&#39;&gt;end_sequence_at&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_snum&#39;&gt;snum&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
2112
+ &lt;span class=&#39;ivar&#39;&gt;@seq_num&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_snum&#39;&gt;snum&lt;/span&gt;
2113
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_evaluate!&#39;&gt;evaluate!&lt;/span&gt;
2114
+ &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
2115
+
2116
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_analyze!&#39;&gt;analyze!&lt;/span&gt;
2117
+ &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_speciate!&#39;&gt;speciate!&lt;/span&gt;
2118
+
2119
+ &lt;span class=&#39;gvar&#39;&gt;$log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_dump_s&#39;&gt;dump_s&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@verbosity&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;lt;&lt;/span&gt; &lt;span class=&#39;int&#39;&gt;3&lt;/span&gt;
2120
+
2121
+ &lt;span class=&#39;id identifier rubyid_new_pop&#39;&gt;new_pop&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_evolve&#39;&gt;evolve&lt;/span&gt;
2122
+
2123
+ &lt;span class=&#39;comment&#39;&gt;## Report hook for evaluation</pre>
2124
+
2125
+ <p>&lt;/span&gt; &lt;span
2126
+ class=&#39;ivar&#39;&gt;@report_hook&lt;/span&gt;&lt;span
2127
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2128
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2129
+ class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span
2130
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2131
+ rubyid_report&#39;&gt;report&lt;/span&gt;&lt;span
2132
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2133
+ class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span
2134
+ class=&#39;ivar&#39;&gt;@report_hook&lt;/span&gt;&lt;span
2135
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2136
+ rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</p>
2137
+
2138
+ <pre>&lt;span class=&#39;comment&#39;&gt;## Exit if fitness criteria is reached</pre>
2139
+
2140
+ <p>&lt;/span&gt; &lt;span class=&#39;comment&#39;&gt;#FIXME handle this
2141
+ exit condition better!!!!! &lt;/span&gt; &lt;span class=&#39;id
2142
+ identifier rubyid_exit&#39;&gt;exit&lt;/span&gt; &lt;span
2143
+ class=&#39;kw&#39;&gt;if&lt;/span&gt; &lt;span
2144
+ class=&#39;ivar&#39;&gt;@stop_on_fit_func&lt;/span&gt;&lt;span
2145
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2146
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2147
+ class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span
2148
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2149
+ rubyid_report&#39;&gt;report&lt;/span&gt;&lt;span
2150
+ class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span
2151
+ class=&#39;symbol&#39;&gt;:fitness&lt;/span&gt;&lt;span
2152
+ class=&#39;rbracket&#39;&gt;]&lt;/span&gt;&lt;span
2153
+ class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span
2154
+ class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span
2155
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2156
+ class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span
2157
+ class=&#39;ivar&#39;&gt;@stop_on_fit_func&lt;/span&gt;&lt;span
2158
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2159
+ rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</p>
2160
+
2161
+ <pre>&lt;span class=&#39;comment&#39;&gt;## Evolve population</pre>
2162
+
2163
+ <p>&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;
2164
+ &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id
2165
+ identifier rubyid_new_pop&#39;&gt;new_pop&lt;/span&gt;</p>
2166
+
2167
+ <pre>&lt;span class=&#39;comment&#39;&gt;## Finish up this run</pre>
2168
+
2169
+ <p>&lt;/span&gt; &lt;span
2170
+ class=&#39;ivar&#39;&gt;@end_run_func&lt;/span&gt;&lt;span
2171
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2172
+ class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2173
+ class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span
2174
+ class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2175
+ class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span
2176
+ class=&#39;ivar&#39;&gt;@end_run_func&lt;/span&gt;&lt;span
2177
+ class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2178
+ rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</p>
2179
+
2180
+ <pre>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;</pre>
2181
+
2182
+ <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
2183
+
2184
+ <pre> &lt;/td&gt;
2185
+ &lt;/tr&gt;</pre>
2186
+
2187
+ <p>&lt;/table&gt; &lt;/div&gt;</p>
2188
+
2189
+ <pre>&lt;/div&gt;</pre>
2190
+
2191
+ <p>&lt;/div&gt;</p>
2192
+
2193
+ <pre> &lt;div id=&quot;footer&quot;&gt;
2194
+ Generated on Sun Mar 16 16:36:52 2014 by
2195
+ &lt;a href=&quot;http://yardoc.org&quot; title=&quot;Yay! A Ruby Documentation Tool&quot; target=&quot;_parent&quot;&gt;yard&lt;/a&gt;
2196
+ 0.8.7.3 (ruby-2.1.1).</pre>
2197
+
2198
+ <p>&lt;/div&gt;</p>
2199
+
2200
+ <pre>&lt;/body&gt;</pre>
2201
+
2202
+ <p>&lt;/html&gt;</p>
2203
+ </main>
2204
+
2205
+
2206
+
2207
+ <footer id="validator-badges" role="contentinfo">
2208
+ <p><a href="http://validator.w3.org/check/referer">Validate</a>
2209
+ <p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
2210
+ <p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
2211
+ </footer>
2212
+