rubyneat 0.3.5.alpha.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +7 -0
- data/.directory +4 -0
- data/.gitignore.orig +20 -0
- data/.idea/.name +1 -0
- data/.idea/.rakeTasks +7 -0
- data/.idea/dictionaries/trader.xml +3 -0
- data/.idea/encodings.xml +5 -0
- data/.idea/misc.xml +5 -0
- data/.idea/modules.xml +9 -0
- data/.idea/rubyneat.iml +197 -0
- data/.idea/runConfigurations/invpend_neat.xml +26 -0
- data/.idea/runConfigurations/sigdebug_neat.xml +24 -0
- data/.idea/runConfigurations/xor_neat.xml +26 -0
- data/.idea/runConfigurations/xordebug_neat.xml +24 -0
- data/.idea/runConfigurations/xorsin_neat.xml +24 -0
- data/.idea/scopes/scope_settings.xml +5 -0
- data/.idea/vcs.xml +7 -0
- data/.idea/workspace.xml +1124 -0
- data/.semver +5 -0
- data/.yardoc/checksums +11 -0
- data/.yardoc/object_types +0 -0
- data/.yardoc/objects/root.dat +0 -0
- data/.yardoc/proxy_types +0 -0
- data/Gemfile +32 -0
- data/Gemfile.lock +135 -0
- data/Gemfile.lock.orig +147 -0
- data/Guardfile +8 -0
- data/Rakefile +61 -0
- data/bin/neat +83 -0
- data/config/application.rb +5 -0
- data/doc/ControllerPoint.html +125 -0
- data/doc/CuteA.html +286 -0
- data/doc/CuteB.html +297 -0
- data/doc/DSL.html +883 -0
- data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +518 -0
- data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +274 -0
- data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +366 -0
- data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +275 -0
- data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +274 -0
- data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +274 -0
- data/doc/NEAT/BasicNeuronTypes.html +136 -0
- data/doc/NEAT/Controller/NeatSettings.html +3985 -0
- data/doc/NEAT/Controller.html +2490 -0
- data/doc/NEAT/Critter/Genotype/Gene.html +979 -0
- data/doc/NEAT/Critter/Genotype.html +1601 -0
- data/doc/NEAT/Critter/Phenotype.html +603 -0
- data/doc/NEAT/Critter.html +1037 -0
- data/doc/NEAT/DSL.html +1255 -0
- data/doc/NEAT/Evaluator.html +420 -0
- data/doc/NEAT/Evolver/CritterOp.html +551 -0
- data/doc/NEAT/Evolver.html +602 -0
- data/doc/NEAT/Expressor.html +327 -0
- data/doc/NEAT/Graph/DependencyResolver.html +478 -0
- data/doc/NEAT/Graph/GraphException.html +123 -0
- data/doc/NEAT/Graph.html +402 -0
- data/doc/NEAT/NeatException.html +123 -0
- data/doc/NEAT/NeatOb.html +567 -0
- data/doc/NEAT/Neuron.html +1067 -0
- data/doc/NEAT/Operator.html +162 -0
- data/doc/NEAT/Population.html +1961 -0
- data/doc/NEAT/Trait.html +169 -0
- data/doc/NEAT.html +588 -0
- data/doc/_index.html +373 -0
- data/doc/class_list.html +54 -0
- data/doc/css/common.css +1 -0
- data/doc/css/full_list.css +57 -0
- data/doc/css/style.css +339 -0
- data/doc/file_list.html +53 -0
- data/doc/frames.html +26 -0
- data/doc/index.html +373 -0
- data/doc/js/app.js +219 -0
- data/doc/js/full_list.js +178 -0
- data/doc/js/jquery.js +4 -0
- data/doc/method_list.html +1415 -0
- data/doc/top-level-namespace.html +164 -0
- data/foo/foo_aquarium_example.rb +38 -0
- data/foo/foo_gosu.rb +99 -0
- data/foo/foo_rubygoo.rb +104 -0
- data/foo/foo_sdl.rb +34 -0
- data/foo/icon.png +0 -0
- data/lib/rubyneat/critter.rb +374 -0
- data/lib/rubyneat/default_neat.rb +10 -0
- data/lib/rubyneat/dsl.rb +130 -0
- data/lib/rubyneat/evaluator.rb +51 -0
- data/lib/rubyneat/evolver.rb +315 -0
- data/lib/rubyneat/expressor.rb +110 -0
- data/lib/rubyneat/graph.rb +95 -0
- data/lib/rubyneat/neuron.rb +152 -0
- data/lib/rubyneat/population.rb +227 -0
- data/lib/rubyneat/rubyneat.rb +429 -0
- data/lib/rubyneat.rb +8 -0
- data/neater/invpend_neat.rb +150 -0
- data/neater/rnlib/inverted_pendulum.rb +380 -0
- data/neater/rnlib/xor.rb +10 -0
- data/neater/sigdebug_neat.rb +136 -0
- data/neater/xor_neat.rb +137 -0
- data/neater/xoranalog_neat.rb +138 -0
- data/neater/xorsin_neat.rb +143 -0
- data/projectFilesBackup/.idea/rubyneat.iml +180 -0
- data/public/.directory +4 -0
- data/public/background.png +0 -0
- data/public/background.xcf +0 -0
- data/public/cart.png +0 -0
- data/public/cart.xcf +0 -0
- data/public/metalpoles_molton_ball_l.jpg +0 -0
- data/public/old_background.png +0 -0
- data/public/pointer.png +0 -0
- data/public/pointer.xcf +0 -0
- data/public/pole.kra +0 -0
- data/public/pole.png +0 -0
- data/public/pole.xcf +0 -0
- data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
- data/public/wheel.png +0 -0
- data/public/wheel.xcf +0 -0
- data/public/wood-planks-texture.jpg +0 -0
- data/rdoc/ControllerPoint.html +116 -0
- data/rdoc/CuteA.html +177 -0
- data/rdoc/CuteB.html +178 -0
- data/rdoc/DSLSetup.html +177 -0
- data/rdoc/GameTestWindow.html +242 -0
- data/rdoc/GameWindow.html +292 -0
- data/rdoc/Gemfile.html +215 -0
- data/rdoc/Gemfile_lock.html +327 -0
- data/rdoc/GraphTest.html +210 -0
- data/rdoc/Guardfile.html +198 -0
- data/rdoc/InvertedPendulum/Cart.html +668 -0
- data/rdoc/InvertedPendulum/DSL.html +259 -0
- data/rdoc/InvertedPendulum/InvPendWindow.html +402 -0
- data/rdoc/InvertedPendulum.html +198 -0
- data/rdoc/Logger.html +98 -0
- data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +265 -0
- data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +162 -0
- data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +206 -0
- data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +162 -0
- data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +162 -0
- data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +161 -0
- data/rdoc/NEAT/BasicNeuronTypes.html +107 -0
- data/rdoc/NEAT/Controller/NeatSettings.html +880 -0
- data/rdoc/NEAT/Controller.html +729 -0
- data/rdoc/NEAT/Critter/Genotype/Gene.html +457 -0
- data/rdoc/NEAT/Critter/Genotype.html +735 -0
- data/rdoc/NEAT/Critter/Phenotype.html +330 -0
- data/rdoc/NEAT/Critter.html +489 -0
- data/rdoc/NEAT/DSL.html +729 -0
- data/rdoc/NEAT/Evaluator.html +256 -0
- data/rdoc/NEAT/Evolver/CritterOp.html +349 -0
- data/rdoc/NEAT/Evolver.html +891 -0
- data/rdoc/NEAT/Expressor.html +402 -0
- data/rdoc/NEAT/Graph/DependencyResolver.html +291 -0
- data/rdoc/NEAT/Graph/GraphException.html +105 -0
- data/rdoc/NEAT/Graph.html +263 -0
- data/rdoc/NEAT/NeatException.html +105 -0
- data/rdoc/NEAT/NeatOb.html +325 -0
- data/rdoc/NEAT/Neuron.html +481 -0
- data/rdoc/NEAT/Operator.html +109 -0
- data/rdoc/NEAT/Population.html +935 -0
- data/rdoc/NEAT/Trait.html +117 -0
- data/rdoc/NEAT.html +422 -0
- data/rdoc/Object.html +384 -0
- data/rdoc/Phi.html +98 -0
- data/rdoc/Player.html +383 -0
- data/rdoc/Rakefile.html +254 -0
- data/rdoc/RubyNEAT/Application.html +105 -0
- data/rdoc/RubyNEAT.html +98 -0
- data/rdoc/SDL/Event2.html +98 -0
- data/rdoc/SDL.html +98 -0
- data/rdoc/Vector.html +195 -0
- data/rdoc/created.rid +125 -0
- data/rdoc/doc/ControllerPoint_html.html +299 -0
- data/rdoc/doc/CuteA_html.html +438 -0
- data/rdoc/doc/CuteB_html.html +436 -0
- data/rdoc/doc/DSL_html.html +992 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +617 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +413 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +498 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +413 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +413 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +412 -0
- data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +310 -0
- data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +3324 -0
- data/rdoc/doc/NEAT/Controller_html.html +2212 -0
- data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +997 -0
- data/rdoc/doc/NEAT/Critter/Genotype_html.html +1556 -0
- data/rdoc/doc/NEAT/Critter/Phenotype_html.html +687 -0
- data/rdoc/doc/NEAT/Critter_html.html +1037 -0
- data/rdoc/doc/NEAT/DSL_html.html +1349 -0
- data/rdoc/doc/NEAT/Evaluator_html.html +556 -0
- data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +690 -0
- data/rdoc/doc/NEAT/Evolver_html.html +677 -0
- data/rdoc/doc/NEAT/Expressor_html.html +468 -0
- data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +598 -0
- data/rdoc/doc/NEAT/Graph/GraphException_html.html +299 -0
- data/rdoc/doc/NEAT/Graph_html.html +527 -0
- data/rdoc/doc/NEAT/NeatException_html.html +299 -0
- data/rdoc/doc/NEAT/NeatOb_html.html +671 -0
- data/rdoc/doc/NEAT/Neuron_html.html +1095 -0
- data/rdoc/doc/NEAT/Operator_html.html +337 -0
- data/rdoc/doc/NEAT/Population_html.html +1795 -0
- data/rdoc/doc/NEAT/Trait_html.html +344 -0
- data/rdoc/doc/NEAT_html.html +736 -0
- data/rdoc/doc/_index_html.html +559 -0
- data/rdoc/doc/class_list_html.html +369 -0
- data/rdoc/doc/css/common_css.html +188 -0
- data/rdoc/doc/css/full_list_css.html +243 -0
- data/rdoc/doc/css/style_css.html +530 -0
- data/rdoc/doc/file_list_html.html +240 -0
- data/rdoc/doc/frames_html.html +217 -0
- data/rdoc/doc/index_html.html +559 -0
- data/rdoc/doc/js/app_js.html +423 -0
- data/rdoc/doc/js/full_list_js.html +372 -0
- data/rdoc/doc/js/jquery_js.html +1536 -0
- data/rdoc/doc/method_list_html.html +1375 -0
- data/rdoc/doc/top-level-namespace_html.html +317 -0
- data/rdoc/fonts/Lato-Light.ttf +0 -0
- data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
- data/rdoc/fonts/Lato-Regular.ttf +0 -0
- data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
- data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
- data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
- data/rdoc/fonts.css +167 -0
- data/rdoc/images/add.png +0 -0
- data/rdoc/images/arrow_up.png +0 -0
- data/rdoc/images/brick.png +0 -0
- data/rdoc/images/brick_link.png +0 -0
- data/rdoc/images/bug.png +0 -0
- data/rdoc/images/bullet_black.png +0 -0
- data/rdoc/images/bullet_toggle_minus.png +0 -0
- data/rdoc/images/bullet_toggle_plus.png +0 -0
- data/rdoc/images/date.png +0 -0
- data/rdoc/images/delete.png +0 -0
- data/rdoc/images/find.png +0 -0
- data/rdoc/images/loadingAnimation.gif +0 -0
- data/rdoc/images/macFFBgHack.png +0 -0
- data/rdoc/images/package.png +0 -0
- data/rdoc/images/page_green.png +0 -0
- data/rdoc/images/page_white_text.png +0 -0
- data/rdoc/images/page_white_width.png +0 -0
- data/rdoc/images/plugin.png +0 -0
- data/rdoc/images/ruby.png +0 -0
- data/rdoc/images/tag_blue.png +0 -0
- data/rdoc/images/tag_green.png +0 -0
- data/rdoc/images/transparent.png +0 -0
- data/rdoc/images/wrench.png +0 -0
- data/rdoc/images/wrench_orange.png +0 -0
- data/rdoc/images/zoom.png +0 -0
- data/rdoc/index.html +282 -0
- data/rdoc/js/darkfish.js +140 -0
- data/rdoc/js/jquery.js +18 -0
- data/rdoc/js/navigation.js +142 -0
- data/rdoc/js/search.js +109 -0
- data/rdoc/js/search_index.js +1 -0
- data/rdoc/js/searcher.js +228 -0
- data/rdoc/rdoc.css +580 -0
- data/rdoc/rubyneat_gemspec.html +387 -0
- data/rdoc/table_of_contents.html +2502 -0
- data/rdoc/xordebug_log.html +170598 -0
- data/rdoc/xorsin_log.html +22569 -0
- data/rubyneat.gemspec +347 -0
- data/rubyneat.gemspec.orig +375 -0
- data/spec/lib/rubyneat/rubyneat_spec.rb +132 -0
- metadata +555 -0
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<h1 id="class-NEAT::Controller-label-Controller+for+all+operations+of+RubyNEAT"><a href="Controller.html">Controller</a> for all operations of <a href="../RubyNEAT.html">RubyNEAT</a><span><a href="#class-NEAT::Controller-label-Controller+for+all+operations+of+RubyNEAT">¶</a> <a href="#documentation">↑</a></span></h1>
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<div class="method-description">
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<p>Compare function for fitness Cost function for integrating in the cost to
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the fitness scalar.</p>
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</div>
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</div>
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<div id="attribute-i-cost_func" class="method-detail">
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<div class="method-heading attribute-method-heading">
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<span class="method-name">cost_func</span><span
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class="attribute-access-type">[RW]</span>
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</div>
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+
|
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<div class="method-description">
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<p>Compare function for fitness Cost function for integrating in the cost to
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the fitness scalar.</p>
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</div>
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</div>
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<div id="attribute-i-end_run_func" class="method-detail">
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<div class="method-heading attribute-method-heading">
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<span class="method-name">end_run_func</span><span
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class="attribute-access-type">[RW]</span>
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</div>
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<div class="method-description">
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<p>End run function to call at the end of each generational run Also <a
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href="Controller.html#attribute-i-report_hook">#report_hook</a> to dump
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reports for the user, etc.</p>
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</div>
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</div>
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<div id="attribute-i-evaluator" class="method-detail">
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<div class="method-heading attribute-method-heading">
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<span class="method-name">evaluator</span><span
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class="attribute-access-type">[RW]</span>
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</div>
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<div class="method-description">
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</div>
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</div>
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<div id="attribute-i-evaluator_class" class="method-detail">
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<div class="method-heading attribute-method-heading">
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<span class="method-name">evaluator_class</span><span
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class="attribute-access-type">[RW]</span>
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</div>
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<div class="method-description">
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</div>
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</div>
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|
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<div id="attribute-i-evolver" class="method-detail">
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<div class="method-heading attribute-method-heading">
|
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<span class="method-name">evolver</span><span
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class="attribute-access-type">[RW]</span>
|
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</div>
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<div class="method-description">
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</div>
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</div>
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|
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<div id="attribute-i-evolver_class" class="method-detail">
|
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<div class="method-heading attribute-method-heading">
|
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+
<span class="method-name">evolver_class</span><span
|
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class="attribute-access-type">[RW]</span>
|
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+
</div>
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+
|
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<div class="method-description">
|
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+
|
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+
|
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+
|
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</div>
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+
</div>
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+
|
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+
<div id="attribute-i-expressor" class="method-detail">
|
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+
<div class="method-heading attribute-method-heading">
|
|
221
|
+
<span class="method-name">expressor</span><span
|
|
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|
+
class="attribute-access-type">[RW]</span>
|
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|
+
</div>
|
|
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|
+
|
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|
+
<div class="method-description">
|
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+
|
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+
|
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+
|
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|
+
</div>
|
|
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|
+
</div>
|
|
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|
+
|
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|
+
<div id="attribute-i-expressor_class" class="method-detail">
|
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|
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<div class="method-heading attribute-method-heading">
|
|
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|
+
<span class="method-name">expressor_class</span><span
|
|
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|
+
class="attribute-access-type">[RW]</span>
|
|
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|
+
</div>
|
|
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|
+
|
|
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|
+
<div class="method-description">
|
|
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|
+
|
|
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|
+
|
|
241
|
+
|
|
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|
+
</div>
|
|
243
|
+
</div>
|
|
244
|
+
|
|
245
|
+
<div id="attribute-i-fitness_func" class="method-detail">
|
|
246
|
+
<div class="method-heading attribute-method-heading">
|
|
247
|
+
<span class="method-name">fitness_func</span><span
|
|
248
|
+
class="attribute-access-type">[RW]</span>
|
|
249
|
+
</div>
|
|
250
|
+
|
|
251
|
+
<div class="method-description">
|
|
252
|
+
|
|
253
|
+
<p>Fitness function that Critters shall be rated on.</p>
|
|
254
|
+
|
|
255
|
+
</div>
|
|
256
|
+
</div>
|
|
257
|
+
|
|
258
|
+
<div id="attribute-i-generation_num" class="method-detail">
|
|
259
|
+
<div class="method-heading attribute-method-heading">
|
|
260
|
+
<span class="method-name">generation_num</span><span
|
|
261
|
+
class="attribute-access-type">[R]</span>
|
|
262
|
+
</div>
|
|
263
|
+
|
|
264
|
+
<div class="method-description">
|
|
265
|
+
|
|
266
|
+
<p>Current generation count</p>
|
|
267
|
+
|
|
268
|
+
</div>
|
|
269
|
+
</div>
|
|
270
|
+
|
|
271
|
+
<div id="attribute-i-glob_innov_num" class="method-detail">
|
|
272
|
+
<div class="method-heading attribute-method-heading">
|
|
273
|
+
<span class="method-name">glob_innov_num</span><span
|
|
274
|
+
class="attribute-access-type">[R]</span>
|
|
275
|
+
</div>
|
|
276
|
+
|
|
277
|
+
<div class="method-description">
|
|
278
|
+
|
|
279
|
+
<p>global innovation number</p>
|
|
280
|
+
|
|
281
|
+
</div>
|
|
282
|
+
</div>
|
|
283
|
+
|
|
284
|
+
<div id="attribute-i-log" class="method-detail">
|
|
285
|
+
<div class="method-heading attribute-method-heading">
|
|
286
|
+
<span class="method-name">log</span><span
|
|
287
|
+
class="attribute-access-type">[R]</span>
|
|
288
|
+
</div>
|
|
289
|
+
|
|
290
|
+
<div class="method-description">
|
|
291
|
+
|
|
292
|
+
<p>Logger object for all of <a href="../RubyNEAT.html">RubyNEAT</a></p>
|
|
293
|
+
|
|
294
|
+
</div>
|
|
295
|
+
</div>
|
|
296
|
+
|
|
297
|
+
<div id="attribute-i-neural_hidden" class="method-detail">
|
|
298
|
+
<div class="method-heading attribute-method-heading">
|
|
299
|
+
<span class="method-name">neural_hidden</span><span
|
|
300
|
+
class="attribute-access-type">[RW]</span>
|
|
301
|
+
</div>
|
|
302
|
+
|
|
303
|
+
<div class="method-description">
|
|
304
|
+
|
|
305
|
+
<p>Class map of named input and output neurons (each critter will have
|
|
306
|
+
instantiations of these) name: InputNeuralClass (usually InputNeuron)</p>
|
|
307
|
+
|
|
308
|
+
</div>
|
|
309
|
+
</div>
|
|
310
|
+
|
|
311
|
+
<div id="attribute-i-neural_inputs" class="method-detail">
|
|
312
|
+
<div class="method-heading attribute-method-heading">
|
|
313
|
+
<span class="method-name">neural_inputs</span><span
|
|
314
|
+
class="attribute-access-type">[RW]</span>
|
|
315
|
+
</div>
|
|
316
|
+
|
|
317
|
+
<div class="method-description">
|
|
318
|
+
|
|
319
|
+
<p>Class map of named input and output neurons (each critter will have
|
|
320
|
+
instantiations of these) name: InputNeuralClass (usually InputNeuron)</p>
|
|
321
|
+
|
|
322
|
+
</div>
|
|
323
|
+
</div>
|
|
324
|
+
|
|
325
|
+
<div id="attribute-i-neural_outputs" class="method-detail">
|
|
326
|
+
<div class="method-heading attribute-method-heading">
|
|
327
|
+
<span class="method-name">neural_outputs</span><span
|
|
328
|
+
class="attribute-access-type">[RW]</span>
|
|
329
|
+
</div>
|
|
330
|
+
|
|
331
|
+
<div class="method-description">
|
|
332
|
+
|
|
333
|
+
<p>Class map of named input and output neurons (each critter will have
|
|
334
|
+
instantiations of these) name: InputNeuralClass (usually InputNeuron)</p>
|
|
335
|
+
|
|
336
|
+
</div>
|
|
337
|
+
</div>
|
|
338
|
+
|
|
339
|
+
<div id="attribute-i-neuron_catalog" class="method-detail">
|
|
340
|
+
<div class="method-heading attribute-method-heading">
|
|
341
|
+
<span class="method-name">neuron_catalog</span><span
|
|
342
|
+
class="attribute-access-type">[RW]</span>
|
|
343
|
+
</div>
|
|
344
|
+
|
|
345
|
+
<div class="method-description">
|
|
346
|
+
|
|
347
|
+
<p>catalog of neurons classes to use { weight => nclass, … }</p>
|
|
348
|
+
|
|
349
|
+
</div>
|
|
350
|
+
</div>
|
|
351
|
+
|
|
352
|
+
<div id="attribute-i-parms" class="method-detail">
|
|
353
|
+
<div class="method-heading attribute-method-heading">
|
|
354
|
+
<span class="method-name">parms</span><span
|
|
355
|
+
class="attribute-access-type">[RW]</span>
|
|
356
|
+
</div>
|
|
357
|
+
|
|
358
|
+
<div class="method-description">
|
|
359
|
+
|
|
360
|
+
<p>Parameters for evolution (NeatParameters)</p>
|
|
361
|
+
|
|
362
|
+
</div>
|
|
363
|
+
</div>
|
|
364
|
+
|
|
365
|
+
<div id="attribute-i-population" class="method-detail">
|
|
366
|
+
<div class="method-heading attribute-method-heading">
|
|
367
|
+
<span class="method-name">population</span><span
|
|
368
|
+
class="attribute-access-type">[R]</span>
|
|
369
|
+
</div>
|
|
370
|
+
|
|
371
|
+
<div class="method-description">
|
|
372
|
+
|
|
373
|
+
<p>population object and class specification</p>
|
|
374
|
+
|
|
375
|
+
</div>
|
|
376
|
+
</div>
|
|
377
|
+
|
|
378
|
+
<div id="attribute-i-population_class" class="method-detail">
|
|
379
|
+
<div class="method-heading attribute-method-heading">
|
|
380
|
+
<span class="method-name">population_class</span><span
|
|
381
|
+
class="attribute-access-type">[R]</span>
|
|
382
|
+
</div>
|
|
383
|
+
|
|
384
|
+
<div class="method-description">
|
|
385
|
+
|
|
386
|
+
<p>population object and class specification</p>
|
|
387
|
+
|
|
388
|
+
</div>
|
|
389
|
+
</div>
|
|
390
|
+
|
|
391
|
+
<div id="attribute-i-population_history" class="method-detail">
|
|
392
|
+
<div class="method-heading attribute-method-heading">
|
|
393
|
+
<span class="method-name">population_history</span><span
|
|
394
|
+
class="attribute-access-type">[R]</span>
|
|
395
|
+
</div>
|
|
396
|
+
|
|
397
|
+
<div class="method-description">
|
|
398
|
+
|
|
399
|
+
<p>population object and class specification</p>
|
|
400
|
+
|
|
401
|
+
</div>
|
|
402
|
+
</div>
|
|
403
|
+
|
|
404
|
+
<div id="attribute-i-query_func" class="method-detail">
|
|
405
|
+
<div class="method-heading attribute-method-heading">
|
|
406
|
+
<span class="method-name">query_func</span><span
|
|
407
|
+
class="attribute-access-type">[RW]</span>
|
|
408
|
+
</div>
|
|
409
|
+
|
|
410
|
+
<div class="method-description">
|
|
411
|
+
|
|
412
|
+
<p>Query function that Critters shall call.</p>
|
|
413
|
+
|
|
414
|
+
</div>
|
|
415
|
+
</div>
|
|
416
|
+
|
|
417
|
+
<div id="attribute-i-recurrence_func" class="method-detail">
|
|
418
|
+
<div class="method-heading attribute-method-heading">
|
|
419
|
+
<span class="method-name">recurrence_func</span><span
|
|
420
|
+
class="attribute-access-type">[RW]</span>
|
|
421
|
+
</div>
|
|
422
|
+
|
|
423
|
+
<div class="method-description">
|
|
424
|
+
|
|
425
|
+
<p>Recurrence function that Critters will yield to.</p>
|
|
426
|
+
|
|
427
|
+
</div>
|
|
428
|
+
</div>
|
|
429
|
+
|
|
430
|
+
<div id="attribute-i-report_hook" class="method-detail">
|
|
431
|
+
<div class="method-heading attribute-method-heading">
|
|
432
|
+
<span class="method-name">report_hook</span><span
|
|
433
|
+
class="attribute-access-type">[RW]</span>
|
|
434
|
+
</div>
|
|
435
|
+
|
|
436
|
+
<div class="method-description">
|
|
437
|
+
|
|
438
|
+
<p>End run function to call at the end of each generational run Also <a
|
|
439
|
+
href="Controller.html#attribute-i-report_hook">#report_hook</a> to dump
|
|
440
|
+
reports for the user, etc.</p>
|
|
441
|
+
|
|
442
|
+
</div>
|
|
443
|
+
</div>
|
|
444
|
+
|
|
445
|
+
<div id="attribute-i-seq_num" class="method-detail">
|
|
446
|
+
<div class="method-heading attribute-method-heading">
|
|
447
|
+
<span class="method-name">seq_num</span><span
|
|
448
|
+
class="attribute-access-type">[R]</span>
|
|
449
|
+
</div>
|
|
450
|
+
|
|
451
|
+
<div class="method-description">
|
|
452
|
+
|
|
453
|
+
<p>current sequence number being evaluated</p>
|
|
454
|
+
|
|
455
|
+
</div>
|
|
456
|
+
</div>
|
|
457
|
+
|
|
458
|
+
<div id="attribute-i-stop_on_fit_func" class="method-detail">
|
|
459
|
+
<div class="method-heading attribute-method-heading">
|
|
460
|
+
<span class="method-name">stop_on_fit_func</span><span
|
|
461
|
+
class="attribute-access-type">[RW]</span>
|
|
462
|
+
</div>
|
|
463
|
+
|
|
464
|
+
<div class="method-description">
|
|
465
|
+
|
|
466
|
+
<p>Compare function for fitness Cost function for integrating in the cost to
|
|
467
|
+
the fitness scalar.</p>
|
|
468
|
+
|
|
469
|
+
</div>
|
|
470
|
+
</div>
|
|
471
|
+
|
|
472
|
+
<div id="attribute-i-verbosity" class="method-detail">
|
|
473
|
+
<div class="method-heading attribute-method-heading">
|
|
474
|
+
<span class="method-name">verbosity</span><span
|
|
475
|
+
class="attribute-access-type">[RW]</span>
|
|
476
|
+
</div>
|
|
477
|
+
|
|
478
|
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|
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<p>Global verbosity level:</p>
|
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481
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|
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<pre>1 - normal (the default)
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2 - really verbose
|
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3 - maximally verbose</pre>
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<p>Use in conjunction with log.debug</p>
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|
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</div>
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</div>
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<section id="public-class-5Buntitled-5D-method-details" class="method-section">
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<h3>Public Class Methods</h3>
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<div id="method-c-new" class="method-detail ">
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<div class="method-heading">
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<span class="method-name">new</span><span
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class="method-args">(neural_inputs: nil, neural_outputs: nil, neural_hidden: nil, parameters: NeatSettings.new, &block)</span>
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+
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<span class="method-click-advice">click to toggle source</span>
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</div>
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<ul><li>
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<p><a href="Controller.html#attribute-i-neural_inputs">#neural_inputs</a> –
|
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+
array of input classes</p>
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</li><li>
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<p><a href="Controller.html#attribute-i-neural_outputs">#neural_outputs</a> –
|
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+
array of output classes</p>
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</li><li>
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<p>parameters – NeatParameters object, or a path to a YAML file to create
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this.</p>
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</li></ul>
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<div class="method-calls-super">
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Calls superclass method
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<a href="NeatOb.html#method-c-new">NEAT::NeatOb.new</a>
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</div>
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<div class="method-source-code" id="new-source">
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<pre><span class="ruby-comment"># File lib/rubyneat/rubyneat.rb, line 334</span>
|
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535
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">neural_inputs</span><span class="ruby-operator">:</span> <span class="ruby-keyword">nil</span>,
|
|
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|
+
<span class="ruby-identifier">neural_outputs</span><span class="ruby-operator">:</span> <span class="ruby-keyword">nil</span>,
|
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+
<span class="ruby-identifier">neural_hidden</span><span class="ruby-operator">:</span> <span class="ruby-keyword">nil</span>,
|
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|
+
<span class="ruby-identifier">parameters</span><span class="ruby-operator">:</span> <span class="ruby-constant">NeatSettings</span>.<span class="ruby-identifier">new</span>,
|
|
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|
+
<span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
|
|
540
|
+
<span class="ruby-keyword">super</span>(<span class="ruby-keyword">self</span>)
|
|
541
|
+
<span class="ruby-ivar">@verbosity</span> = <span class="ruby-value">1</span>
|
|
542
|
+
<span class="ruby-ivar">@glob_innov_num</span> = <span class="ruby-value">0</span>
|
|
543
|
+
<span class="ruby-ivar">@gaussian</span> = <span class="ruby-constant">Distribution</span><span class="ruby-operator">::</span><span class="ruby-constant">Normal</span>.<span class="ruby-identifier">rng</span>
|
|
544
|
+
<span class="ruby-ivar">@population_history</span> = []
|
|
545
|
+
<span class="ruby-ivar">@evolver</span> = <span class="ruby-constant">Evolver</span>.<span class="ruby-identifier">new</span> <span class="ruby-keyword">self</span>
|
|
546
|
+
<span class="ruby-ivar">@expressor</span> = <span class="ruby-constant">Expressor</span>.<span class="ruby-identifier">new</span> <span class="ruby-keyword">self</span>
|
|
547
|
+
|
|
548
|
+
<span class="ruby-ivar">@neuron_catalog</span> = <span class="ruby-constant">Neuron</span><span class="ruby-operator">::</span><span class="ruby-identifier">neuron_types</span>.<span class="ruby-identifier">clone</span>
|
|
549
|
+
<span class="ruby-ivar">@neural_inputs</span> = <span class="ruby-identifier">neural_inputs</span>
|
|
550
|
+
<span class="ruby-ivar">@neural_outputs</span> = <span class="ruby-identifier">neural_outputs</span>
|
|
551
|
+
<span class="ruby-ivar">@neural_hidden</span> = <span class="ruby-identifier">neural_hidden</span>
|
|
552
|
+
|
|
553
|
+
<span class="ruby-comment"># Default classes for population and operators, etc.</span>
|
|
554
|
+
<span class="ruby-ivar">@population_class</span> = <span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-constant">Population</span>
|
|
555
|
+
<span class="ruby-ivar">@evaluator_class</span> = <span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-constant">Evaluator</span>
|
|
556
|
+
<span class="ruby-ivar">@expressor_class</span> = <span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-constant">Expressor</span>
|
|
557
|
+
<span class="ruby-ivar">@evolver_class</span> = <span class="ruby-constant">NEAT</span><span class="ruby-operator">::</span><span class="ruby-constant">Evolver</span>
|
|
558
|
+
|
|
559
|
+
<span class="ruby-comment"># Handle the parameters parameter. :-)</span>
|
|
560
|
+
<span class="ruby-ivar">@parms</span> = <span class="ruby-keyword">unless</span> <span class="ruby-identifier">parameters</span>.<span class="ruby-identifier">kind_of?</span> <span class="ruby-constant">String</span>
|
|
561
|
+
<span class="ruby-identifier">parameters</span>
|
|
562
|
+
<span class="ruby-keyword">else</span> <span class="ruby-comment"># load it from a file</span>
|
|
563
|
+
<span class="ruby-identifier">open</span>(<span class="ruby-identifier">parameters</span>, <span class="ruby-string">'r'</span>) { <span class="ruby-operator">|</span><span class="ruby-identifier">fd</span><span class="ruby-operator">|</span> <span class="ruby-constant">YAML</span><span class="ruby-operator">::</span><span class="ruby-identifier">load</span> <span class="ruby-identifier">fd</span>.<span class="ruby-identifier">read</span> }
|
|
564
|
+
<span class="ruby-keyword">end</span>
|
|
565
|
+
<span class="ruby-identifier">block</span>.(<span class="ruby-keyword">self</span>) <span class="ruby-keyword">unless</span> <span class="ruby-identifier">block</span>.<span class="ruby-identifier">nil?</span>
|
|
566
|
+
<span class="ruby-keyword">end</span></pre>
|
|
567
|
+
</div>
|
|
568
|
+
|
|
569
|
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</div>
|
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|
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|
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|
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</div>
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|
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|
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|
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</section>
|
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|
|
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|
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<section id="public-instance-5Buntitled-5D-method-details" class="method-section">
|
|
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|
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<header>
|
|
581
|
+
<h3>Public Instance Methods</h3>
|
|
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|
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</header>
|
|
583
|
+
|
|
584
|
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|
|
585
|
+
<div id="method-i-gaussian" class="method-detail ">
|
|
586
|
+
|
|
587
|
+
<div class="method-heading">
|
|
588
|
+
<span class="method-name">gaussian</span><span
|
|
589
|
+
class="method-args">()</span>
|
|
590
|
+
|
|
591
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
592
|
+
|
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593
|
+
</div>
|
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|
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|
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|
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<div class="method-description">
|
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|
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|
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|
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|
|
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|
+
|
|
603
|
+
<div class="method-source-code" id="gaussian-source">
|
|
604
|
+
<pre><span class="ruby-comment"># File lib/rubyneat/rubyneat.rb, line 368</span>
|
|
605
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">gaussian</span> ; <span class="ruby-ivar">@gaussian</span>.() ; <span class="ruby-keyword">end</span></pre>
|
|
606
|
+
</div>
|
|
607
|
+
|
|
608
|
+
</div>
|
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609
|
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|
|
610
|
+
|
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611
|
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|
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612
|
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|
|
613
|
+
</div>
|
|
614
|
+
|
|
615
|
+
|
|
616
|
+
<div id="method-i-new_innovation" class="method-detail ">
|
|
617
|
+
|
|
618
|
+
<div class="method-heading">
|
|
619
|
+
<span class="method-name">new_innovation</span><span
|
|
620
|
+
class="method-args">()</span>
|
|
621
|
+
|
|
622
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
623
|
+
|
|
624
|
+
</div>
|
|
625
|
+
|
|
626
|
+
|
|
627
|
+
<div class="method-description">
|
|
628
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+
|
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629
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|
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|
|
631
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+
|
|
632
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+
|
|
633
|
+
|
|
634
|
+
<div class="method-source-code" id="new_innovation-source">
|
|
635
|
+
<pre><span class="ruby-comment"># File lib/rubyneat/rubyneat.rb, line 367</span>
|
|
636
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">new_innovation</span> ; <span class="ruby-ivar">@glob_innov_num</span> <span class="ruby-operator">+=</span> <span class="ruby-value">1</span>; <span class="ruby-keyword">end</span></pre>
|
|
637
|
+
</div>
|
|
638
|
+
|
|
639
|
+
</div>
|
|
640
|
+
|
|
641
|
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|
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642
|
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|
|
643
|
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|
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644
|
+
</div>
|
|
645
|
+
|
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646
|
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|
|
647
|
+
<div id="method-i-run" class="method-detail ">
|
|
648
|
+
|
|
649
|
+
<div class="method-heading">
|
|
650
|
+
<span class="method-name">run</span><span
|
|
651
|
+
class="method-args">()</span>
|
|
652
|
+
|
|
653
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
654
|
+
|
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655
|
+
</div>
|
|
656
|
+
|
|
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|
+
|
|
658
|
+
<div class="method-description">
|
|
659
|
+
|
|
660
|
+
<p>Run this evolution.</p>
|
|
661
|
+
|
|
662
|
+
|
|
663
|
+
|
|
664
|
+
|
|
665
|
+
<div class="method-source-code" id="run-source">
|
|
666
|
+
<pre><span class="ruby-comment"># File lib/rubyneat/rubyneat.rb, line 371</span>
|
|
667
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">run</span>
|
|
668
|
+
<span class="ruby-identifier">pre_run_initialize</span>
|
|
669
|
+
(<span class="ruby-value">1</span><span class="ruby-operator">..</span><span class="ruby-ivar">@parms</span>.<span class="ruby-identifier">max_generations</span>).<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">gen_number</span><span class="ruby-operator">|</span>
|
|
670
|
+
<span class="ruby-ivar">@generation_num</span> = <span class="ruby-identifier">gen_number</span>
|
|
671
|
+
<span class="ruby-ivar">@population_history</span> <span class="ruby-operator"><<</span> <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">nil?</span>
|
|
672
|
+
<span class="ruby-ivar">@population</span>
|
|
673
|
+
<span class="ruby-keyword">else</span>
|
|
674
|
+
<span class="ruby-ivar">@population</span> = <span class="ruby-ivar">@population_class</span>.<span class="ruby-identifier">new</span>(<span class="ruby-keyword">self</span>)
|
|
675
|
+
<span class="ruby-keyword">end</span>
|
|
676
|
+
<span class="ruby-ivar">@population_history</span>.<span class="ruby-identifier">shift</span> <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@population_history</span>.<span class="ruby-identifier">size</span> <span class="ruby-operator"><=</span> <span class="ruby-ivar">@parms</span>.<span class="ruby-identifier">max_population_history</span>
|
|
677
|
+
<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">mutate!</span>
|
|
678
|
+
<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">express!</span>
|
|
679
|
+
|
|
680
|
+
<span class="ruby-comment">## Evaluate population</span>
|
|
681
|
+
<span class="ruby-ivar">@evaluator</span>.<span class="ruby-identifier">ready_for_evaluation</span> <span class="ruby-ivar">@population</span>
|
|
682
|
+
(<span class="ruby-ivar">@parms</span>.<span class="ruby-identifier">start_sequence_at</span> <span class="ruby-operator">..</span> <span class="ruby-ivar">@parms</span>.<span class="ruby-identifier">end_sequence_at</span>).<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">snum</span><span class="ruby-operator">|</span>
|
|
683
|
+
<span class="ruby-ivar">@seq_num</span> = <span class="ruby-identifier">snum</span>
|
|
684
|
+
<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">evaluate!</span>
|
|
685
|
+
<span class="ruby-keyword">end</span>
|
|
686
|
+
|
|
687
|
+
<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">analyze!</span>
|
|
688
|
+
<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">speciate!</span>
|
|
689
|
+
|
|
690
|
+
<span class="ruby-identifier">$log</span>.<span class="ruby-identifier">debug</span> <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">dump_s</span> <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@verbosity</span> <span class="ruby-operator"><</span> <span class="ruby-value">3</span>
|
|
691
|
+
|
|
692
|
+
<span class="ruby-identifier">new_pop</span> = <span class="ruby-ivar">@population</span>.<span class="ruby-identifier">evolve</span>
|
|
693
|
+
|
|
694
|
+
<span class="ruby-comment">## Report hook for evaluation</span>
|
|
695
|
+
<span class="ruby-ivar">@report_hook</span>.(<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">report</span>) <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@report_hook</span>.<span class="ruby-identifier">nil?</span>
|
|
696
|
+
|
|
697
|
+
<span class="ruby-comment">## Exit if fitness criteria is reached</span>
|
|
698
|
+
<span class="ruby-comment">#FIXME handle this exit condition better!!!!!</span>
|
|
699
|
+
<span class="ruby-identifier">exit</span> <span class="ruby-keyword">if</span> <span class="ruby-ivar">@stop_on_fit_func</span>.(<span class="ruby-ivar">@population</span>.<span class="ruby-identifier">report</span>[<span class="ruby-value">:fitness</span>], <span class="ruby-keyword">self</span>) <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@stop_on_fit_func</span>.<span class="ruby-identifier">nil?</span>
|
|
700
|
+
|
|
701
|
+
<span class="ruby-comment">## Evolve population</span>
|
|
702
|
+
<span class="ruby-ivar">@population</span> = <span class="ruby-identifier">new_pop</span>
|
|
703
|
+
|
|
704
|
+
<span class="ruby-comment">## Finish up this run</span>
|
|
705
|
+
<span class="ruby-ivar">@end_run_func</span>.(<span class="ruby-keyword">self</span>) <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@end_run_func</span>.<span class="ruby-identifier">nil?</span>
|
|
706
|
+
<span class="ruby-keyword">end</span>
|
|
707
|
+
<span class="ruby-keyword">end</span></pre>
|
|
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|
+
</div>
|
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709
|
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|
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|
+
</div>
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</div>
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</section>
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</main>
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<footer id="validator-badges" role="contentinfo">
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<p><a href="http://validator.w3.org/check/referer">Validate</a>
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<p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
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+
<p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
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</footer>
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