tomoto 0.2.2 → 0.3.0

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Files changed (369) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +10 -0
  3. data/README.md +8 -10
  4. data/ext/tomoto/ct.cpp +11 -11
  5. data/ext/tomoto/dmr.cpp +14 -13
  6. data/ext/tomoto/dt.cpp +14 -14
  7. data/ext/tomoto/extconf.rb +7 -5
  8. data/ext/tomoto/gdmr.cpp +7 -7
  9. data/ext/tomoto/hdp.cpp +9 -9
  10. data/ext/tomoto/hlda.cpp +13 -13
  11. data/ext/tomoto/hpa.cpp +5 -5
  12. data/ext/tomoto/lda.cpp +42 -39
  13. data/ext/tomoto/llda.cpp +6 -6
  14. data/ext/tomoto/mglda.cpp +15 -15
  15. data/ext/tomoto/pa.cpp +6 -6
  16. data/ext/tomoto/plda.cpp +6 -6
  17. data/ext/tomoto/slda.cpp +8 -8
  18. data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
  19. data/ext/tomoto/utils.h +16 -70
  20. data/lib/tomoto/version.rb +1 -1
  21. data/lib/tomoto.rb +5 -1
  22. data/vendor/EigenRand/EigenRand/Core.h +10 -10
  23. data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
  24. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
  25. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
  26. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
  27. data/vendor/EigenRand/EigenRand/EigenRand +11 -6
  28. data/vendor/EigenRand/EigenRand/Macro.h +13 -7
  29. data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
  30. data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
  31. data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
  32. data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
  33. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
  34. data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
  35. data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
  36. data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
  37. data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
  38. data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
  39. data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
  40. data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
  41. data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
  42. data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
  43. data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
  44. data/vendor/EigenRand/EigenRand/doc.h +24 -12
  45. data/vendor/EigenRand/README.md +57 -4
  46. data/vendor/eigen/COPYING.APACHE +203 -0
  47. data/vendor/eigen/COPYING.BSD +1 -1
  48. data/vendor/eigen/COPYING.MINPACK +51 -52
  49. data/vendor/eigen/Eigen/Cholesky +0 -1
  50. data/vendor/eigen/Eigen/Core +112 -265
  51. data/vendor/eigen/Eigen/Eigenvalues +2 -3
  52. data/vendor/eigen/Eigen/Geometry +5 -8
  53. data/vendor/eigen/Eigen/Householder +0 -1
  54. data/vendor/eigen/Eigen/Jacobi +0 -1
  55. data/vendor/eigen/Eigen/KLUSupport +41 -0
  56. data/vendor/eigen/Eigen/LU +2 -5
  57. data/vendor/eigen/Eigen/OrderingMethods +0 -3
  58. data/vendor/eigen/Eigen/PaStiXSupport +1 -0
  59. data/vendor/eigen/Eigen/PardisoSupport +0 -0
  60. data/vendor/eigen/Eigen/QR +2 -3
  61. data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
  62. data/vendor/eigen/Eigen/SVD +0 -1
  63. data/vendor/eigen/Eigen/Sparse +0 -2
  64. data/vendor/eigen/Eigen/SparseCholesky +0 -8
  65. data/vendor/eigen/Eigen/SparseLU +4 -0
  66. data/vendor/eigen/Eigen/SparseQR +0 -1
  67. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
  68. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
  69. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
  70. data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
  71. data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
  72. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
  73. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
  74. data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
  75. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
  76. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
  77. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
  78. data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
  79. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
  80. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
  81. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
  82. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
  84. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
  85. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
  86. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
  87. data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
  88. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
  89. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
  90. data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
  91. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
  92. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
  93. data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
  94. data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
  95. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
  96. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
  97. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
  98. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
  99. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
  100. data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
  101. data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
  102. data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
  103. data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
  104. data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
  105. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
  106. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
  107. data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
  108. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
  109. data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
  110. data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
  111. data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
  112. data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  113. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
  114. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
  115. data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
  116. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
  117. data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
  118. data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
  119. data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
  120. data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
  121. data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
  122. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
  123. data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
  124. data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
  125. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
  126. data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
  127. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
  128. data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
  129. data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
  130. data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
  131. data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
  132. data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
  133. data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
  134. data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
  135. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
  136. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
  137. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
  138. data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
  139. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
  140. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
  141. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
  142. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
  143. data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
  145. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
  146. data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
  148. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
  149. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
  153. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
  154. data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
  156. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
  160. data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  161. data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
  162. data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  163. data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  164. data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  165. data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  166. data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  167. data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  168. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
  169. data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  170. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
  171. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
  172. data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  173. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
  174. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
  175. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
  176. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
  177. data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  178. data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  179. data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  180. data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  181. data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  182. data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  183. data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  184. data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  185. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
  186. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
  187. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
  188. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
  189. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
  190. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
  191. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
  192. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
  193. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
  194. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
  195. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
  196. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
  197. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
  198. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
  199. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
  200. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
  201. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
  202. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
  203. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
  204. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
  205. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
  206. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
  207. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
  208. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
  209. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
  210. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
  211. data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  212. data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
  213. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
  214. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
  215. data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  216. data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
  217. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
  218. data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
  219. data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
  220. data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
  221. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
  222. data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  223. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
  224. data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  225. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
  226. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
  227. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
  228. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
  229. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
  230. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
  231. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
  232. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
  233. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
  234. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
  235. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
  236. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
  237. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
  238. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
  239. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
  240. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
  241. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
  242. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
  243. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
  244. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
  245. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
  246. data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
  247. data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
  248. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
  249. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  250. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
  251. data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
  252. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
  253. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
  254. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
  255. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
  256. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
  257. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
  258. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
  259. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
  260. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
  261. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
  262. data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  263. data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
  264. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
  265. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
  266. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
  267. data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
  268. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
  269. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
  270. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
  271. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
  272. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
  273. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
  274. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
  275. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
  276. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
  277. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
  278. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
  279. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
  280. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
  281. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
  282. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
  283. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
  284. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
  285. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
  295. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
  296. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
  297. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
  298. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
  299. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
  300. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
  303. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
  304. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
  306. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
  307. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
  308. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
  309. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
  310. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
  311. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
  312. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
  313. data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
  314. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
  315. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
  316. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
  317. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
  318. data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  319. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
  320. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
  321. data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
  322. data/vendor/eigen/README.md +2 -0
  323. data/vendor/eigen/bench/btl/README +1 -1
  324. data/vendor/eigen/bench/tensors/README +6 -7
  325. data/vendor/eigen/ci/README.md +56 -0
  326. data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
  327. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
  328. data/vendor/eigen/unsupported/README.txt +1 -1
  329. data/vendor/tomotopy/README.kr.rst +78 -0
  330. data/vendor/tomotopy/README.rst +75 -0
  331. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
  332. data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
  333. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
  334. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
  335. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
  336. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
  337. data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
  338. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
  339. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
  340. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
  341. data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
  342. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
  343. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
  344. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
  345. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
  346. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
  347. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
  348. data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
  349. data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
  350. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
  351. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
  352. data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
  353. data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
  354. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
  355. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
  356. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
  357. data/vendor/tomotopy/src/Utils/exception.h +6 -0
  358. data/vendor/tomotopy/src/Utils/math.h +2 -2
  359. data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
  360. data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
  361. data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
  362. metadata +64 -18
  363. data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
  364. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
  365. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
  366. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
  367. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
  368. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
  369. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -0,0 +1,351 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2001 Intel Corporation
5
+ // Copyright (C) 2010 Gael Guennebaud <gael.guennebaud@inria.fr>
6
+ // Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
7
+ //
8
+ // This Source Code Form is subject to the terms of the Mozilla
9
+ // Public License v. 2.0. If a copy of the MPL was not distributed
10
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
11
+ //
12
+ // The algorithm below is a reimplementation of former \src\LU\Inverse_SSE.h using PacketMath.
13
+ // inv(M) = M#/|M|, where inv(M), M# and |M| denote the inverse of M,
14
+ // adjugate of M and determinant of M respectively. M# is computed block-wise
15
+ // using specific formulae. For proof, see:
16
+ // https://lxjk.github.io/2017/09/03/Fast-4x4-Matrix-Inverse-with-SSE-SIMD-Explained.html
17
+ // Variable names are adopted from \src\LU\Inverse_SSE.h.
18
+ //
19
+ // The SSE code for the 4x4 float and double matrix inverse in former (deprecated) \src\LU\Inverse_SSE.h
20
+ // comes from the following Intel's library:
21
+ // http://software.intel.com/en-us/articles/optimized-matrix-library-for-use-with-the-intel-pentiumr-4-processors-sse2-instructions/
22
+ //
23
+ // Here is the respective copyright and license statement:
24
+ //
25
+ // Copyright (c) 2001 Intel Corporation.
26
+ //
27
+ // Permition is granted to use, copy, distribute and prepare derivative works
28
+ // of this library for any purpose and without fee, provided, that the above
29
+ // copyright notice and this statement appear in all copies.
30
+ // Intel makes no representations about the suitability of this software for
31
+ // any purpose, and specifically disclaims all warranties.
32
+ // See LEGAL.TXT for all the legal information.
33
+ //
34
+ // TODO: Unify implementations of different data types (i.e. float and double).
35
+ #ifndef EIGEN_INVERSE_SIZE_4_H
36
+ #define EIGEN_INVERSE_SIZE_4_H
37
+
38
+ namespace Eigen
39
+ {
40
+ namespace internal
41
+ {
42
+ template <typename MatrixType, typename ResultType>
43
+ struct compute_inverse_size4<Architecture::Target, float, MatrixType, ResultType>
44
+ {
45
+ enum
46
+ {
47
+ MatrixAlignment = traits<MatrixType>::Alignment,
48
+ ResultAlignment = traits<ResultType>::Alignment,
49
+ StorageOrdersMatch = (MatrixType::Flags & RowMajorBit) == (ResultType::Flags & RowMajorBit)
50
+ };
51
+ typedef typename conditional<(MatrixType::Flags & LinearAccessBit), MatrixType const &, typename MatrixType::PlainObject>::type ActualMatrixType;
52
+
53
+ static void run(const MatrixType &mat, ResultType &result)
54
+ {
55
+ ActualMatrixType matrix(mat);
56
+
57
+ const float* data = matrix.data();
58
+ const Index stride = matrix.innerStride();
59
+ Packet4f _L1 = ploadt<Packet4f,MatrixAlignment>(data);
60
+ Packet4f _L2 = ploadt<Packet4f,MatrixAlignment>(data + stride*4);
61
+ Packet4f _L3 = ploadt<Packet4f,MatrixAlignment>(data + stride*8);
62
+ Packet4f _L4 = ploadt<Packet4f,MatrixAlignment>(data + stride*12);
63
+
64
+ // Four 2x2 sub-matrices of the input matrix
65
+ // input = [[A, B],
66
+ // [C, D]]
67
+ Packet4f A, B, C, D;
68
+
69
+ if (!StorageOrdersMatch)
70
+ {
71
+ A = vec4f_unpacklo(_L1, _L2);
72
+ B = vec4f_unpacklo(_L3, _L4);
73
+ C = vec4f_unpackhi(_L1, _L2);
74
+ D = vec4f_unpackhi(_L3, _L4);
75
+ }
76
+ else
77
+ {
78
+ A = vec4f_movelh(_L1, _L2);
79
+ B = vec4f_movehl(_L2, _L1);
80
+ C = vec4f_movelh(_L3, _L4);
81
+ D = vec4f_movehl(_L4, _L3);
82
+ }
83
+
84
+ Packet4f AB, DC;
85
+
86
+ // AB = A# * B, where A# denotes the adjugate of A, and * denotes matrix product.
87
+ AB = pmul(vec4f_swizzle2(A, A, 3, 3, 0, 0), B);
88
+ AB = psub(AB, pmul(vec4f_swizzle2(A, A, 1, 1, 2, 2), vec4f_swizzle2(B, B, 2, 3, 0, 1)));
89
+
90
+ // DC = D#*C
91
+ DC = pmul(vec4f_swizzle2(D, D, 3, 3, 0, 0), C);
92
+ DC = psub(DC, pmul(vec4f_swizzle2(D, D, 1, 1, 2, 2), vec4f_swizzle2(C, C, 2, 3, 0, 1)));
93
+
94
+ // determinants of the sub-matrices
95
+ Packet4f dA, dB, dC, dD;
96
+
97
+ dA = pmul(vec4f_swizzle2(A, A, 3, 3, 1, 1), A);
98
+ dA = psub(dA, vec4f_movehl(dA, dA));
99
+
100
+ dB = pmul(vec4f_swizzle2(B, B, 3, 3, 1, 1), B);
101
+ dB = psub(dB, vec4f_movehl(dB, dB));
102
+
103
+ dC = pmul(vec4f_swizzle2(C, C, 3, 3, 1, 1), C);
104
+ dC = psub(dC, vec4f_movehl(dC, dC));
105
+
106
+ dD = pmul(vec4f_swizzle2(D, D, 3, 3, 1, 1), D);
107
+ dD = psub(dD, vec4f_movehl(dD, dD));
108
+
109
+ Packet4f d, d1, d2;
110
+
111
+ d = pmul(vec4f_swizzle2(DC, DC, 0, 2, 1, 3), AB);
112
+ d = padd(d, vec4f_movehl(d, d));
113
+ d = padd(d, vec4f_swizzle2(d, d, 1, 0, 0, 0));
114
+ d1 = pmul(dA, dD);
115
+ d2 = pmul(dB, dC);
116
+
117
+ // determinant of the input matrix, det = |A||D| + |B||C| - trace(A#*B*D#*C)
118
+ Packet4f det = vec4f_duplane(psub(padd(d1, d2), d), 0);
119
+
120
+ // reciprocal of the determinant of the input matrix, rd = 1/det
121
+ Packet4f rd = pdiv(pset1<Packet4f>(1.0f), det);
122
+
123
+ // Four sub-matrices of the inverse
124
+ Packet4f iA, iB, iC, iD;
125
+
126
+ // iD = D*|A| - C*A#*B
127
+ iD = pmul(vec4f_swizzle2(C, C, 0, 0, 2, 2), vec4f_movelh(AB, AB));
128
+ iD = padd(iD, pmul(vec4f_swizzle2(C, C, 1, 1, 3, 3), vec4f_movehl(AB, AB)));
129
+ iD = psub(pmul(D, vec4f_duplane(dA, 0)), iD);
130
+
131
+ // iA = A*|D| - B*D#*C
132
+ iA = pmul(vec4f_swizzle2(B, B, 0, 0, 2, 2), vec4f_movelh(DC, DC));
133
+ iA = padd(iA, pmul(vec4f_swizzle2(B, B, 1, 1, 3, 3), vec4f_movehl(DC, DC)));
134
+ iA = psub(pmul(A, vec4f_duplane(dD, 0)), iA);
135
+
136
+ // iB = C*|B| - D * (A#B)# = C*|B| - D*B#*A
137
+ iB = pmul(D, vec4f_swizzle2(AB, AB, 3, 0, 3, 0));
138
+ iB = psub(iB, pmul(vec4f_swizzle2(D, D, 1, 0, 3, 2), vec4f_swizzle2(AB, AB, 2, 1, 2, 1)));
139
+ iB = psub(pmul(C, vec4f_duplane(dB, 0)), iB);
140
+
141
+ // iC = B*|C| - A * (D#C)# = B*|C| - A*C#*D
142
+ iC = pmul(A, vec4f_swizzle2(DC, DC, 3, 0, 3, 0));
143
+ iC = psub(iC, pmul(vec4f_swizzle2(A, A, 1, 0, 3, 2), vec4f_swizzle2(DC, DC, 2, 1, 2, 1)));
144
+ iC = psub(pmul(B, vec4f_duplane(dC, 0)), iC);
145
+
146
+ const float sign_mask[4] = {0.0f, numext::bit_cast<float>(0x80000000u), numext::bit_cast<float>(0x80000000u), 0.0f};
147
+ const Packet4f p4f_sign_PNNP = ploadu<Packet4f>(sign_mask);
148
+ rd = pxor(rd, p4f_sign_PNNP);
149
+ iA = pmul(iA, rd);
150
+ iB = pmul(iB, rd);
151
+ iC = pmul(iC, rd);
152
+ iD = pmul(iD, rd);
153
+
154
+ Index res_stride = result.outerStride();
155
+ float *res = result.data();
156
+
157
+ pstoret<float, Packet4f, ResultAlignment>(res + 0, vec4f_swizzle2(iA, iB, 3, 1, 3, 1));
158
+ pstoret<float, Packet4f, ResultAlignment>(res + res_stride, vec4f_swizzle2(iA, iB, 2, 0, 2, 0));
159
+ pstoret<float, Packet4f, ResultAlignment>(res + 2 * res_stride, vec4f_swizzle2(iC, iD, 3, 1, 3, 1));
160
+ pstoret<float, Packet4f, ResultAlignment>(res + 3 * res_stride, vec4f_swizzle2(iC, iD, 2, 0, 2, 0));
161
+ }
162
+ };
163
+
164
+ #if !(defined EIGEN_VECTORIZE_NEON && !(EIGEN_ARCH_ARM64 && !EIGEN_APPLE_DOUBLE_NEON_BUG))
165
+ // same algorithm as above, except that each operand is split into
166
+ // halves for two registers to hold.
167
+ template <typename MatrixType, typename ResultType>
168
+ struct compute_inverse_size4<Architecture::Target, double, MatrixType, ResultType>
169
+ {
170
+ enum
171
+ {
172
+ MatrixAlignment = traits<MatrixType>::Alignment,
173
+ ResultAlignment = traits<ResultType>::Alignment,
174
+ StorageOrdersMatch = (MatrixType::Flags & RowMajorBit) == (ResultType::Flags & RowMajorBit)
175
+ };
176
+ typedef typename conditional<(MatrixType::Flags & LinearAccessBit),
177
+ MatrixType const &,
178
+ typename MatrixType::PlainObject>::type
179
+ ActualMatrixType;
180
+
181
+ static void run(const MatrixType &mat, ResultType &result)
182
+ {
183
+ ActualMatrixType matrix(mat);
184
+
185
+ // Four 2x2 sub-matrices of the input matrix, each is further divided into upper and lower
186
+ // row e.g. A1, upper row of A, A2, lower row of A
187
+ // input = [[A, B], = [[[A1, [B1,
188
+ // [C, D]] A2], B2]],
189
+ // [[C1, [D1,
190
+ // C2], D2]]]
191
+
192
+ Packet2d A1, A2, B1, B2, C1, C2, D1, D2;
193
+
194
+ const double* data = matrix.data();
195
+ const Index stride = matrix.innerStride();
196
+ if (StorageOrdersMatch)
197
+ {
198
+ A1 = ploadt<Packet2d,MatrixAlignment>(data + stride*0);
199
+ B1 = ploadt<Packet2d,MatrixAlignment>(data + stride*2);
200
+ A2 = ploadt<Packet2d,MatrixAlignment>(data + stride*4);
201
+ B2 = ploadt<Packet2d,MatrixAlignment>(data + stride*6);
202
+ C1 = ploadt<Packet2d,MatrixAlignment>(data + stride*8);
203
+ D1 = ploadt<Packet2d,MatrixAlignment>(data + stride*10);
204
+ C2 = ploadt<Packet2d,MatrixAlignment>(data + stride*12);
205
+ D2 = ploadt<Packet2d,MatrixAlignment>(data + stride*14);
206
+ }
207
+ else
208
+ {
209
+ Packet2d temp;
210
+ A1 = ploadt<Packet2d,MatrixAlignment>(data + stride*0);
211
+ C1 = ploadt<Packet2d,MatrixAlignment>(data + stride*2);
212
+ A2 = ploadt<Packet2d,MatrixAlignment>(data + stride*4);
213
+ C2 = ploadt<Packet2d,MatrixAlignment>(data + stride*6);
214
+ temp = A1;
215
+ A1 = vec2d_unpacklo(A1, A2);
216
+ A2 = vec2d_unpackhi(temp, A2);
217
+
218
+ temp = C1;
219
+ C1 = vec2d_unpacklo(C1, C2);
220
+ C2 = vec2d_unpackhi(temp, C2);
221
+
222
+ B1 = ploadt<Packet2d,MatrixAlignment>(data + stride*8);
223
+ D1 = ploadt<Packet2d,MatrixAlignment>(data + stride*10);
224
+ B2 = ploadt<Packet2d,MatrixAlignment>(data + stride*12);
225
+ D2 = ploadt<Packet2d,MatrixAlignment>(data + stride*14);
226
+
227
+ temp = B1;
228
+ B1 = vec2d_unpacklo(B1, B2);
229
+ B2 = vec2d_unpackhi(temp, B2);
230
+
231
+ temp = D1;
232
+ D1 = vec2d_unpacklo(D1, D2);
233
+ D2 = vec2d_unpackhi(temp, D2);
234
+ }
235
+
236
+ // determinants of the sub-matrices
237
+ Packet2d dA, dB, dC, dD;
238
+
239
+ dA = vec2d_swizzle2(A2, A2, 1);
240
+ dA = pmul(A1, dA);
241
+ dA = psub(dA, vec2d_duplane(dA, 1));
242
+
243
+ dB = vec2d_swizzle2(B2, B2, 1);
244
+ dB = pmul(B1, dB);
245
+ dB = psub(dB, vec2d_duplane(dB, 1));
246
+
247
+ dC = vec2d_swizzle2(C2, C2, 1);
248
+ dC = pmul(C1, dC);
249
+ dC = psub(dC, vec2d_duplane(dC, 1));
250
+
251
+ dD = vec2d_swizzle2(D2, D2, 1);
252
+ dD = pmul(D1, dD);
253
+ dD = psub(dD, vec2d_duplane(dD, 1));
254
+
255
+ Packet2d DC1, DC2, AB1, AB2;
256
+
257
+ // AB = A# * B, where A# denotes the adjugate of A, and * denotes matrix product.
258
+ AB1 = pmul(B1, vec2d_duplane(A2, 1));
259
+ AB2 = pmul(B2, vec2d_duplane(A1, 0));
260
+ AB1 = psub(AB1, pmul(B2, vec2d_duplane(A1, 1)));
261
+ AB2 = psub(AB2, pmul(B1, vec2d_duplane(A2, 0)));
262
+
263
+ // DC = D#*C
264
+ DC1 = pmul(C1, vec2d_duplane(D2, 1));
265
+ DC2 = pmul(C2, vec2d_duplane(D1, 0));
266
+ DC1 = psub(DC1, pmul(C2, vec2d_duplane(D1, 1)));
267
+ DC2 = psub(DC2, pmul(C1, vec2d_duplane(D2, 0)));
268
+
269
+ Packet2d d1, d2;
270
+
271
+ // determinant of the input matrix, det = |A||D| + |B||C| - trace(A#*B*D#*C)
272
+ Packet2d det;
273
+
274
+ // reciprocal of the determinant of the input matrix, rd = 1/det
275
+ Packet2d rd;
276
+
277
+ d1 = pmul(AB1, vec2d_swizzle2(DC1, DC2, 0));
278
+ d2 = pmul(AB2, vec2d_swizzle2(DC1, DC2, 3));
279
+ rd = padd(d1, d2);
280
+ rd = padd(rd, vec2d_duplane(rd, 1));
281
+
282
+ d1 = pmul(dA, dD);
283
+ d2 = pmul(dB, dC);
284
+
285
+ det = padd(d1, d2);
286
+ det = psub(det, rd);
287
+ det = vec2d_duplane(det, 0);
288
+ rd = pdiv(pset1<Packet2d>(1.0), det);
289
+
290
+ // rows of four sub-matrices of the inverse
291
+ Packet2d iA1, iA2, iB1, iB2, iC1, iC2, iD1, iD2;
292
+
293
+ // iD = D*|A| - C*A#*B
294
+ iD1 = pmul(AB1, vec2d_duplane(C1, 0));
295
+ iD2 = pmul(AB1, vec2d_duplane(C2, 0));
296
+ iD1 = padd(iD1, pmul(AB2, vec2d_duplane(C1, 1)));
297
+ iD2 = padd(iD2, pmul(AB2, vec2d_duplane(C2, 1)));
298
+ dA = vec2d_duplane(dA, 0);
299
+ iD1 = psub(pmul(D1, dA), iD1);
300
+ iD2 = psub(pmul(D2, dA), iD2);
301
+
302
+ // iA = A*|D| - B*D#*C
303
+ iA1 = pmul(DC1, vec2d_duplane(B1, 0));
304
+ iA2 = pmul(DC1, vec2d_duplane(B2, 0));
305
+ iA1 = padd(iA1, pmul(DC2, vec2d_duplane(B1, 1)));
306
+ iA2 = padd(iA2, pmul(DC2, vec2d_duplane(B2, 1)));
307
+ dD = vec2d_duplane(dD, 0);
308
+ iA1 = psub(pmul(A1, dD), iA1);
309
+ iA2 = psub(pmul(A2, dD), iA2);
310
+
311
+ // iB = C*|B| - D * (A#B)# = C*|B| - D*B#*A
312
+ iB1 = pmul(D1, vec2d_swizzle2(AB2, AB1, 1));
313
+ iB2 = pmul(D2, vec2d_swizzle2(AB2, AB1, 1));
314
+ iB1 = psub(iB1, pmul(vec2d_swizzle2(D1, D1, 1), vec2d_swizzle2(AB2, AB1, 2)));
315
+ iB2 = psub(iB2, pmul(vec2d_swizzle2(D2, D2, 1), vec2d_swizzle2(AB2, AB1, 2)));
316
+ dB = vec2d_duplane(dB, 0);
317
+ iB1 = psub(pmul(C1, dB), iB1);
318
+ iB2 = psub(pmul(C2, dB), iB2);
319
+
320
+ // iC = B*|C| - A * (D#C)# = B*|C| - A*C#*D
321
+ iC1 = pmul(A1, vec2d_swizzle2(DC2, DC1, 1));
322
+ iC2 = pmul(A2, vec2d_swizzle2(DC2, DC1, 1));
323
+ iC1 = psub(iC1, pmul(vec2d_swizzle2(A1, A1, 1), vec2d_swizzle2(DC2, DC1, 2)));
324
+ iC2 = psub(iC2, pmul(vec2d_swizzle2(A2, A2, 1), vec2d_swizzle2(DC2, DC1, 2)));
325
+ dC = vec2d_duplane(dC, 0);
326
+ iC1 = psub(pmul(B1, dC), iC1);
327
+ iC2 = psub(pmul(B2, dC), iC2);
328
+
329
+ const double sign_mask1[2] = {0.0, numext::bit_cast<double>(0x8000000000000000ull)};
330
+ const double sign_mask2[2] = {numext::bit_cast<double>(0x8000000000000000ull), 0.0};
331
+ const Packet2d sign_PN = ploadu<Packet2d>(sign_mask1);
332
+ const Packet2d sign_NP = ploadu<Packet2d>(sign_mask2);
333
+ d1 = pxor(rd, sign_PN);
334
+ d2 = pxor(rd, sign_NP);
335
+
336
+ Index res_stride = result.outerStride();
337
+ double *res = result.data();
338
+ pstoret<double, Packet2d, ResultAlignment>(res + 0, pmul(vec2d_swizzle2(iA2, iA1, 3), d1));
339
+ pstoret<double, Packet2d, ResultAlignment>(res + res_stride, pmul(vec2d_swizzle2(iA2, iA1, 0), d2));
340
+ pstoret<double, Packet2d, ResultAlignment>(res + 2, pmul(vec2d_swizzle2(iB2, iB1, 3), d1));
341
+ pstoret<double, Packet2d, ResultAlignment>(res + res_stride + 2, pmul(vec2d_swizzle2(iB2, iB1, 0), d2));
342
+ pstoret<double, Packet2d, ResultAlignment>(res + 2 * res_stride, pmul(vec2d_swizzle2(iC2, iC1, 3), d1));
343
+ pstoret<double, Packet2d, ResultAlignment>(res + 3 * res_stride, pmul(vec2d_swizzle2(iC2, iC1, 0), d2));
344
+ pstoret<double, Packet2d, ResultAlignment>(res + 2 * res_stride + 2, pmul(vec2d_swizzle2(iD2, iD1, 3), d1));
345
+ pstoret<double, Packet2d, ResultAlignment>(res + 3 * res_stride + 2, pmul(vec2d_swizzle2(iD2, iD1, 0), d2));
346
+ }
347
+ };
348
+ #endif
349
+ } // namespace internal
350
+ } // namespace Eigen
351
+ #endif
@@ -2,32 +2,22 @@
2
2
  // for linear algebra.
3
3
  //
4
4
  // Copyright (C) 2010 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ //
6
+ // This Source Code Form is subject to the terms of the Mozilla
7
+ // Public License v. 2.0. If a copy of the MPL was not distributed
8
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
5
9
 
6
10
  /*
7
-
8
11
  NOTE: this routine has been adapted from the CSparse library:
9
12
 
10
13
  Copyright (c) 2006, Timothy A. Davis.
11
14
  http://www.suitesparse.com
12
15
 
13
- CSparse is free software; you can redistribute it and/or
14
- modify it under the terms of the GNU Lesser General Public
15
- License as published by the Free Software Foundation; either
16
- version 2.1 of the License, or (at your option) any later version.
17
-
18
- CSparse is distributed in the hope that it will be useful,
19
- but WITHOUT ANY WARRANTY; without even the implied warranty of
20
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
21
- Lesser General Public License for more details.
22
-
23
- You should have received a copy of the GNU Lesser General Public
24
- License along with this Module; if not, write to the Free Software
25
- Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
26
-
16
+ The author of CSparse, Timothy A. Davis., has executed a license with Google LLC
17
+ to permit distribution of this code and derivative works as part of Eigen under
18
+ the Mozilla Public License v. 2.0, as stated at the top of this file.
27
19
  */
28
20
 
29
- #include "../Core/util/NonMPL2.h"
30
-
31
21
  #ifndef EIGEN_SPARSE_AMD_H
32
22
  #define EIGEN_SPARSE_AMD_H
33
23