tomoto 0.2.2 → 0.3.0

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Files changed (369) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +10 -0
  3. data/README.md +8 -10
  4. data/ext/tomoto/ct.cpp +11 -11
  5. data/ext/tomoto/dmr.cpp +14 -13
  6. data/ext/tomoto/dt.cpp +14 -14
  7. data/ext/tomoto/extconf.rb +7 -5
  8. data/ext/tomoto/gdmr.cpp +7 -7
  9. data/ext/tomoto/hdp.cpp +9 -9
  10. data/ext/tomoto/hlda.cpp +13 -13
  11. data/ext/tomoto/hpa.cpp +5 -5
  12. data/ext/tomoto/lda.cpp +42 -39
  13. data/ext/tomoto/llda.cpp +6 -6
  14. data/ext/tomoto/mglda.cpp +15 -15
  15. data/ext/tomoto/pa.cpp +6 -6
  16. data/ext/tomoto/plda.cpp +6 -6
  17. data/ext/tomoto/slda.cpp +8 -8
  18. data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
  19. data/ext/tomoto/utils.h +16 -70
  20. data/lib/tomoto/version.rb +1 -1
  21. data/lib/tomoto.rb +5 -1
  22. data/vendor/EigenRand/EigenRand/Core.h +10 -10
  23. data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
  24. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
  25. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
  26. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
  27. data/vendor/EigenRand/EigenRand/EigenRand +11 -6
  28. data/vendor/EigenRand/EigenRand/Macro.h +13 -7
  29. data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
  30. data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
  31. data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
  32. data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
  33. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
  34. data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
  35. data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
  36. data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
  37. data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
  38. data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
  39. data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
  40. data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
  41. data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
  42. data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
  43. data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
  44. data/vendor/EigenRand/EigenRand/doc.h +24 -12
  45. data/vendor/EigenRand/README.md +57 -4
  46. data/vendor/eigen/COPYING.APACHE +203 -0
  47. data/vendor/eigen/COPYING.BSD +1 -1
  48. data/vendor/eigen/COPYING.MINPACK +51 -52
  49. data/vendor/eigen/Eigen/Cholesky +0 -1
  50. data/vendor/eigen/Eigen/Core +112 -265
  51. data/vendor/eigen/Eigen/Eigenvalues +2 -3
  52. data/vendor/eigen/Eigen/Geometry +5 -8
  53. data/vendor/eigen/Eigen/Householder +0 -1
  54. data/vendor/eigen/Eigen/Jacobi +0 -1
  55. data/vendor/eigen/Eigen/KLUSupport +41 -0
  56. data/vendor/eigen/Eigen/LU +2 -5
  57. data/vendor/eigen/Eigen/OrderingMethods +0 -3
  58. data/vendor/eigen/Eigen/PaStiXSupport +1 -0
  59. data/vendor/eigen/Eigen/PardisoSupport +0 -0
  60. data/vendor/eigen/Eigen/QR +2 -3
  61. data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
  62. data/vendor/eigen/Eigen/SVD +0 -1
  63. data/vendor/eigen/Eigen/Sparse +0 -2
  64. data/vendor/eigen/Eigen/SparseCholesky +0 -8
  65. data/vendor/eigen/Eigen/SparseLU +4 -0
  66. data/vendor/eigen/Eigen/SparseQR +0 -1
  67. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
  68. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
  69. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
  70. data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
  71. data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
  72. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
  73. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
  74. data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
  75. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
  76. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
  77. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
  78. data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
  79. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
  80. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
  81. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
  82. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
  84. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
  85. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
  86. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
  87. data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
  88. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
  89. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
  90. data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
  91. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
  92. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
  93. data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
  94. data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
  95. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
  96. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
  97. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
  98. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
  99. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
  100. data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
  101. data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
  102. data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
  103. data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
  104. data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
  105. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
  106. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
  107. data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
  108. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
  109. data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
  110. data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
  111. data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
  112. data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  113. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
  114. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
  115. data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
  116. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
  117. data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
  118. data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
  119. data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
  120. data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
  121. data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
  122. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
  123. data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
  124. data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
  125. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
  126. data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
  127. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
  128. data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
  129. data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
  130. data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
  131. data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
  132. data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
  133. data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
  134. data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
  135. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
  136. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
  137. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
  138. data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
  139. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
  140. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
  141. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
  142. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
  143. data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
  145. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
  146. data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
  148. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
  149. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
  153. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
  154. data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
  156. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
  160. data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  161. data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
  162. data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  163. data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  164. data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  165. data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  166. data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  167. data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  168. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
  169. data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  170. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
  171. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
  172. data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  173. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
  174. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
  175. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
  176. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
  177. data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  178. data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  179. data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  180. data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  181. data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  182. data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  183. data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  184. data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  185. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
  186. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
  187. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
  188. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
  189. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
  190. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
  191. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
  192. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
  193. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
  194. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
  195. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
  196. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
  197. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
  198. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
  199. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
  200. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
  201. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
  202. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
  203. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
  204. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
  205. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
  206. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
  207. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
  208. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
  209. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
  210. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
  211. data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  212. data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
  213. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
  214. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
  215. data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  216. data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
  217. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
  218. data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
  219. data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
  220. data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
  221. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
  222. data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  223. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
  224. data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  225. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
  226. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
  227. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
  228. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
  229. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
  230. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
  231. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
  232. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
  233. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
  234. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
  235. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
  236. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
  237. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
  238. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
  239. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
  240. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
  241. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
  242. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
  243. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
  244. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
  245. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
  246. data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
  247. data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
  248. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
  249. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  250. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
  251. data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
  252. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
  253. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
  254. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
  255. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
  256. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
  257. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
  258. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
  259. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
  260. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
  261. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
  262. data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  263. data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
  264. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
  265. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
  266. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
  267. data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
  268. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
  269. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
  270. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
  271. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
  272. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
  273. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
  274. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
  275. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
  276. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
  277. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
  278. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
  279. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
  280. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
  281. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
  282. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
  283. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
  284. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
  285. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
  295. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
  296. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
  297. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
  298. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
  299. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
  300. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
  303. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
  304. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
  306. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
  307. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
  308. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
  309. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
  310. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
  311. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
  312. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
  313. data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
  314. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
  315. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
  316. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
  317. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
  318. data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  319. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
  320. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
  321. data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
  322. data/vendor/eigen/README.md +2 -0
  323. data/vendor/eigen/bench/btl/README +1 -1
  324. data/vendor/eigen/bench/tensors/README +6 -7
  325. data/vendor/eigen/ci/README.md +56 -0
  326. data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
  327. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
  328. data/vendor/eigen/unsupported/README.txt +1 -1
  329. data/vendor/tomotopy/README.kr.rst +78 -0
  330. data/vendor/tomotopy/README.rst +75 -0
  331. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
  332. data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
  333. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
  334. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
  335. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
  336. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
  337. data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
  338. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
  339. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
  340. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
  341. data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
  342. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
  343. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
  344. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
  345. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
  346. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
  347. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
  348. data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
  349. data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
  350. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
  351. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
  352. data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
  353. data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
  354. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
  355. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
  356. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
  357. data/vendor/tomotopy/src/Utils/exception.h +6 -0
  358. data/vendor/tomotopy/src/Utils/math.h +2 -2
  359. data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
  360. data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
  361. data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
  362. metadata +64 -18
  363. data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
  364. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
  365. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
  366. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
  367. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
  368. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
  369. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -10,7 +10,7 @@
10
10
  #ifndef EIGEN_MATH_FUNCTIONS_AVX_H
11
11
  #define EIGEN_MATH_FUNCTIONS_AVX_H
12
12
 
13
- /* The sin, cos, exp, and log functions of this file are loosely derived from
13
+ /* The sin and cos functions of this file are loosely derived from
14
14
  * Julien Pommier's sse math library: http://gruntthepeon.free.fr/ssemath/
15
15
  */
16
16
 
@@ -18,187 +18,50 @@ namespace Eigen {
18
18
 
19
19
  namespace internal {
20
20
 
21
- inline Packet8i pshiftleft(Packet8i v, int n)
22
- {
23
- #ifdef EIGEN_VECTORIZE_AVX2
24
- return _mm256_slli_epi32(v, n);
25
- #else
26
- __m128i lo = _mm_slli_epi32(_mm256_extractf128_si256(v, 0), n);
27
- __m128i hi = _mm_slli_epi32(_mm256_extractf128_si256(v, 1), n);
28
- return _mm256_insertf128_si256(_mm256_castsi128_si256(lo), (hi), 1);
29
- #endif
21
+ template <>
22
+ EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
23
+ psin<Packet8f>(const Packet8f& _x) {
24
+ return psin_float(_x);
30
25
  }
31
26
 
32
- inline Packet8f pshiftright(Packet8f v, int n)
33
- {
34
- #ifdef EIGEN_VECTORIZE_AVX2
35
- return _mm256_cvtepi32_ps(_mm256_srli_epi32(_mm256_castps_si256(v), n));
36
- #else
37
- __m128i lo = _mm_srli_epi32(_mm256_extractf128_si256(_mm256_castps_si256(v), 0), n);
38
- __m128i hi = _mm_srli_epi32(_mm256_extractf128_si256(_mm256_castps_si256(v), 1), n);
39
- return _mm256_cvtepi32_ps(_mm256_insertf128_si256(_mm256_castsi128_si256(lo), (hi), 1));
40
- #endif
27
+ template <>
28
+ EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
29
+ pcos<Packet8f>(const Packet8f& _x) {
30
+ return pcos_float(_x);
41
31
  }
42
32
 
43
- // Sine function
44
- // Computes sin(x) by wrapping x to the interval [-Pi/4,3*Pi/4] and
45
- // evaluating interpolants in [-Pi/4,Pi/4] or [Pi/4,3*Pi/4]. The interpolants
46
- // are (anti-)symmetric and thus have only odd/even coefficients
47
33
  template <>
48
34
  EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
49
- psin<Packet8f>(const Packet8f& _x) {
50
- Packet8f x = _x;
35
+ plog<Packet8f>(const Packet8f& _x) {
36
+ return plog_float(_x);
37
+ }
51
38
 
52
- // Some useful values.
53
- _EIGEN_DECLARE_CONST_Packet8i(one, 1);
54
- _EIGEN_DECLARE_CONST_Packet8f(one, 1.0f);
55
- _EIGEN_DECLARE_CONST_Packet8f(two, 2.0f);
56
- _EIGEN_DECLARE_CONST_Packet8f(one_over_four, 0.25f);
57
- _EIGEN_DECLARE_CONST_Packet8f(one_over_pi, 3.183098861837907e-01f);
58
- _EIGEN_DECLARE_CONST_Packet8f(neg_pi_first, -3.140625000000000e+00f);
59
- _EIGEN_DECLARE_CONST_Packet8f(neg_pi_second, -9.670257568359375e-04f);
60
- _EIGEN_DECLARE_CONST_Packet8f(neg_pi_third, -6.278329571784980e-07f);
61
- _EIGEN_DECLARE_CONST_Packet8f(four_over_pi, 1.273239544735163e+00f);
62
-
63
- // Map x from [-Pi/4,3*Pi/4] to z in [-1,3] and subtract the shifted period.
64
- Packet8f z = pmul(x, p8f_one_over_pi);
65
- Packet8f shift = _mm256_floor_ps(padd(z, p8f_one_over_four));
66
- x = pmadd(shift, p8f_neg_pi_first, x);
67
- x = pmadd(shift, p8f_neg_pi_second, x);
68
- x = pmadd(shift, p8f_neg_pi_third, x);
69
- z = pmul(x, p8f_four_over_pi);
70
-
71
- // Make a mask for the entries that need flipping, i.e. wherever the shift
72
- // is odd.
73
- Packet8i shift_ints = _mm256_cvtps_epi32(shift);
74
- Packet8i shift_isodd = _mm256_castps_si256(_mm256_and_ps(_mm256_castsi256_ps(shift_ints), _mm256_castsi256_ps(p8i_one)));
75
- Packet8i sign_flip_mask = pshiftleft(shift_isodd, 31);
76
-
77
- // Create a mask for which interpolant to use, i.e. if z > 1, then the mask
78
- // is set to ones for that entry.
79
- Packet8f ival_mask = _mm256_cmp_ps(z, p8f_one, _CMP_GT_OQ);
80
-
81
- // Evaluate the polynomial for the interval [1,3] in z.
82
- _EIGEN_DECLARE_CONST_Packet8f(coeff_right_0, 9.999999724233232e-01f);
83
- _EIGEN_DECLARE_CONST_Packet8f(coeff_right_2, -3.084242535619928e-01f);
84
- _EIGEN_DECLARE_CONST_Packet8f(coeff_right_4, 1.584991525700324e-02f);
85
- _EIGEN_DECLARE_CONST_Packet8f(coeff_right_6, -3.188805084631342e-04f);
86
- Packet8f z_minus_two = psub(z, p8f_two);
87
- Packet8f z_minus_two2 = pmul(z_minus_two, z_minus_two);
88
- Packet8f right = pmadd(p8f_coeff_right_6, z_minus_two2, p8f_coeff_right_4);
89
- right = pmadd(right, z_minus_two2, p8f_coeff_right_2);
90
- right = pmadd(right, z_minus_two2, p8f_coeff_right_0);
91
-
92
- // Evaluate the polynomial for the interval [-1,1] in z.
93
- _EIGEN_DECLARE_CONST_Packet8f(coeff_left_1, 7.853981525427295e-01f);
94
- _EIGEN_DECLARE_CONST_Packet8f(coeff_left_3, -8.074536727092352e-02f);
95
- _EIGEN_DECLARE_CONST_Packet8f(coeff_left_5, 2.489871967827018e-03f);
96
- _EIGEN_DECLARE_CONST_Packet8f(coeff_left_7, -3.587725841214251e-05f);
97
- Packet8f z2 = pmul(z, z);
98
- Packet8f left = pmadd(p8f_coeff_left_7, z2, p8f_coeff_left_5);
99
- left = pmadd(left, z2, p8f_coeff_left_3);
100
- left = pmadd(left, z2, p8f_coeff_left_1);
101
- left = pmul(left, z);
102
-
103
- // Assemble the results, i.e. select the left and right polynomials.
104
- left = _mm256_andnot_ps(ival_mask, left);
105
- right = _mm256_and_ps(ival_mask, right);
106
- Packet8f res = _mm256_or_ps(left, right);
107
-
108
- // Flip the sign on the odd intervals and return the result.
109
- res = _mm256_xor_ps(res, _mm256_castsi256_ps(sign_flip_mask));
110
- return res;
39
+ template <>
40
+ EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet4d
41
+ plog<Packet4d>(const Packet4d& _x) {
42
+ return plog_double(_x);
111
43
  }
112
44
 
113
- // Natural logarithm
114
- // Computes log(x) as log(2^e * m) = C*e + log(m), where the constant C =log(2)
115
- // and m is in the range [sqrt(1/2),sqrt(2)). In this range, the logarithm can
116
- // be easily approximated by a polynomial centered on m=1 for stability.
117
- // TODO(gonnet): Further reduce the interval allowing for lower-degree
118
- // polynomial interpolants -> ... -> profit!
119
45
  template <>
120
46
  EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
121
- plog<Packet8f>(const Packet8f& _x) {
122
- Packet8f x = _x;
123
- _EIGEN_DECLARE_CONST_Packet8f(1, 1.0f);
124
- _EIGEN_DECLARE_CONST_Packet8f(half, 0.5f);
125
- _EIGEN_DECLARE_CONST_Packet8f(126f, 126.0f);
126
-
127
- _EIGEN_DECLARE_CONST_Packet8f_FROM_INT(inv_mant_mask, ~0x7f800000);
128
-
129
- // The smallest non denormalized float number.
130
- _EIGEN_DECLARE_CONST_Packet8f_FROM_INT(min_norm_pos, 0x00800000);
131
- _EIGEN_DECLARE_CONST_Packet8f_FROM_INT(minus_inf, 0xff800000);
132
-
133
- // Polynomial coefficients.
134
- _EIGEN_DECLARE_CONST_Packet8f(cephes_SQRTHF, 0.707106781186547524f);
135
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p0, 7.0376836292E-2f);
136
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p1, -1.1514610310E-1f);
137
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p2, 1.1676998740E-1f);
138
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p3, -1.2420140846E-1f);
139
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p4, +1.4249322787E-1f);
140
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p5, -1.6668057665E-1f);
141
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p6, +2.0000714765E-1f);
142
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p7, -2.4999993993E-1f);
143
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_p8, +3.3333331174E-1f);
144
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_q1, -2.12194440e-4f);
145
- _EIGEN_DECLARE_CONST_Packet8f(cephes_log_q2, 0.693359375f);
146
-
147
- Packet8f invalid_mask = _mm256_cmp_ps(x, _mm256_setzero_ps(), _CMP_NGE_UQ); // not greater equal is true if x is NaN
148
- Packet8f iszero_mask = _mm256_cmp_ps(x, _mm256_setzero_ps(), _CMP_EQ_OQ);
149
-
150
- // Truncate input values to the minimum positive normal.
151
- x = pmax(x, p8f_min_norm_pos);
152
-
153
- Packet8f emm0 = pshiftright(x,23);
154
- Packet8f e = _mm256_sub_ps(emm0, p8f_126f);
155
-
156
- // Set the exponents to -1, i.e. x are in the range [0.5,1).
157
- x = _mm256_and_ps(x, p8f_inv_mant_mask);
158
- x = _mm256_or_ps(x, p8f_half);
159
-
160
- // part2: Shift the inputs from the range [0.5,1) to [sqrt(1/2),sqrt(2))
161
- // and shift by -1. The values are then centered around 0, which improves
162
- // the stability of the polynomial evaluation.
163
- // if( x < SQRTHF ) {
164
- // e -= 1;
165
- // x = x + x - 1.0;
166
- // } else { x = x - 1.0; }
167
- Packet8f mask = _mm256_cmp_ps(x, p8f_cephes_SQRTHF, _CMP_LT_OQ);
168
- Packet8f tmp = _mm256_and_ps(x, mask);
169
- x = psub(x, p8f_1);
170
- e = psub(e, _mm256_and_ps(p8f_1, mask));
171
- x = padd(x, tmp);
172
-
173
- Packet8f x2 = pmul(x, x);
174
- Packet8f x3 = pmul(x2, x);
175
-
176
- // Evaluate the polynomial approximant of degree 8 in three parts, probably
177
- // to improve instruction-level parallelism.
178
- Packet8f y, y1, y2;
179
- y = pmadd(p8f_cephes_log_p0, x, p8f_cephes_log_p1);
180
- y1 = pmadd(p8f_cephes_log_p3, x, p8f_cephes_log_p4);
181
- y2 = pmadd(p8f_cephes_log_p6, x, p8f_cephes_log_p7);
182
- y = pmadd(y, x, p8f_cephes_log_p2);
183
- y1 = pmadd(y1, x, p8f_cephes_log_p5);
184
- y2 = pmadd(y2, x, p8f_cephes_log_p8);
185
- y = pmadd(y, x3, y1);
186
- y = pmadd(y, x3, y2);
187
- y = pmul(y, x3);
188
-
189
- // Add the logarithm of the exponent back to the result of the interpolation.
190
- y1 = pmul(e, p8f_cephes_log_q1);
191
- tmp = pmul(x2, p8f_half);
192
- y = padd(y, y1);
193
- x = psub(x, tmp);
194
- y2 = pmul(e, p8f_cephes_log_q2);
195
- x = padd(x, y);
196
- x = padd(x, y2);
197
-
198
- // Filter out invalid inputs, i.e. negative arg will be NAN, 0 will be -INF.
199
- return _mm256_or_ps(
200
- _mm256_andnot_ps(iszero_mask, _mm256_or_ps(x, invalid_mask)),
201
- _mm256_and_ps(iszero_mask, p8f_minus_inf));
47
+ plog2<Packet8f>(const Packet8f& _x) {
48
+ return plog2_float(_x);
49
+ }
50
+
51
+ template <>
52
+ EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet4d
53
+ plog2<Packet4d>(const Packet4d& _x) {
54
+ return plog2_double(_x);
55
+ }
56
+
57
+ template<> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
58
+ Packet8f plog1p<Packet8f>(const Packet8f& _x) {
59
+ return generic_plog1p(_x);
60
+ }
61
+
62
+ template<> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
63
+ Packet8f pexpm1<Packet8f>(const Packet8f& _x) {
64
+ return generic_expm1(_x);
202
65
  }
203
66
 
204
67
  // Exponential function. Works by writing "x = m*log(2) + r" where
@@ -207,149 +70,21 @@ plog<Packet8f>(const Packet8f& _x) {
207
70
  template <>
208
71
  EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
209
72
  pexp<Packet8f>(const Packet8f& _x) {
210
- _EIGEN_DECLARE_CONST_Packet8f(1, 1.0f);
211
- _EIGEN_DECLARE_CONST_Packet8f(half, 0.5f);
212
- _EIGEN_DECLARE_CONST_Packet8f(127, 127.0f);
213
-
214
- _EIGEN_DECLARE_CONST_Packet8f(exp_hi, 88.3762626647950f);
215
- _EIGEN_DECLARE_CONST_Packet8f(exp_lo, -88.3762626647949f);
216
-
217
- _EIGEN_DECLARE_CONST_Packet8f(cephes_LOG2EF, 1.44269504088896341f);
218
-
219
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_p0, 1.9875691500E-4f);
220
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_p1, 1.3981999507E-3f);
221
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_p2, 8.3334519073E-3f);
222
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_p3, 4.1665795894E-2f);
223
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_p4, 1.6666665459E-1f);
224
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_p5, 5.0000001201E-1f);
225
-
226
- // Clamp x.
227
- Packet8f x = pmax(pmin(_x, p8f_exp_hi), p8f_exp_lo);
228
-
229
- // Express exp(x) as exp(m*ln(2) + r), start by extracting
230
- // m = floor(x/ln(2) + 0.5).
231
- Packet8f m = _mm256_floor_ps(pmadd(x, p8f_cephes_LOG2EF, p8f_half));
232
-
233
- // Get r = x - m*ln(2). If no FMA instructions are available, m*ln(2) is
234
- // subtracted out in two parts, m*C1+m*C2 = m*ln(2), to avoid accumulating
235
- // truncation errors. Note that we don't use the "pmadd" function here to
236
- // ensure that a precision-preserving FMA instruction is used.
237
- #ifdef EIGEN_VECTORIZE_FMA
238
- _EIGEN_DECLARE_CONST_Packet8f(nln2, -0.6931471805599453f);
239
- Packet8f r = _mm256_fmadd_ps(m, p8f_nln2, x);
240
- #else
241
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_C1, 0.693359375f);
242
- _EIGEN_DECLARE_CONST_Packet8f(cephes_exp_C2, -2.12194440e-4f);
243
- Packet8f r = psub(x, pmul(m, p8f_cephes_exp_C1));
244
- r = psub(r, pmul(m, p8f_cephes_exp_C2));
245
- #endif
246
-
247
- Packet8f r2 = pmul(r, r);
248
-
249
- // TODO(gonnet): Split into odd/even polynomials and try to exploit
250
- // instruction-level parallelism.
251
- Packet8f y = p8f_cephes_exp_p0;
252
- y = pmadd(y, r, p8f_cephes_exp_p1);
253
- y = pmadd(y, r, p8f_cephes_exp_p2);
254
- y = pmadd(y, r, p8f_cephes_exp_p3);
255
- y = pmadd(y, r, p8f_cephes_exp_p4);
256
- y = pmadd(y, r, p8f_cephes_exp_p5);
257
- y = pmadd(y, r2, r);
258
- y = padd(y, p8f_1);
259
-
260
- // Build emm0 = 2^m.
261
- Packet8i emm0 = _mm256_cvttps_epi32(padd(m, p8f_127));
262
- emm0 = pshiftleft(emm0, 23);
263
-
264
- // Return 2^m * exp(r).
265
- return pmax(pmul(y, _mm256_castsi256_ps(emm0)), _x);
73
+ return pexp_float(_x);
266
74
  }
267
75
 
268
76
  // Hyperbolic Tangent function.
269
77
  template <>
270
78
  EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
271
- ptanh<Packet8f>(const Packet8f& x) {
272
- return internal::generic_fast_tanh_float(x);
79
+ ptanh<Packet8f>(const Packet8f& _x) {
80
+ return internal::generic_fast_tanh_float(_x);
273
81
  }
274
82
 
83
+ // Exponential function for doubles.
275
84
  template <>
276
85
  EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet4d
277
86
  pexp<Packet4d>(const Packet4d& _x) {
278
- Packet4d x = _x;
279
-
280
- _EIGEN_DECLARE_CONST_Packet4d(1, 1.0);
281
- _EIGEN_DECLARE_CONST_Packet4d(2, 2.0);
282
- _EIGEN_DECLARE_CONST_Packet4d(half, 0.5);
283
-
284
- _EIGEN_DECLARE_CONST_Packet4d(exp_hi, 709.437);
285
- _EIGEN_DECLARE_CONST_Packet4d(exp_lo, -709.436139303);
286
-
287
- _EIGEN_DECLARE_CONST_Packet4d(cephes_LOG2EF, 1.4426950408889634073599);
288
-
289
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_p0, 1.26177193074810590878e-4);
290
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_p1, 3.02994407707441961300e-2);
291
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_p2, 9.99999999999999999910e-1);
292
-
293
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_q0, 3.00198505138664455042e-6);
294
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_q1, 2.52448340349684104192e-3);
295
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_q2, 2.27265548208155028766e-1);
296
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_q3, 2.00000000000000000009e0);
297
-
298
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_C1, 0.693145751953125);
299
- _EIGEN_DECLARE_CONST_Packet4d(cephes_exp_C2, 1.42860682030941723212e-6);
300
- _EIGEN_DECLARE_CONST_Packet4i(1023, 1023);
301
-
302
- Packet4d tmp, fx;
303
-
304
- // clamp x
305
- x = pmax(pmin(x, p4d_exp_hi), p4d_exp_lo);
306
- // Express exp(x) as exp(g + n*log(2)).
307
- fx = pmadd(p4d_cephes_LOG2EF, x, p4d_half);
308
-
309
- // Get the integer modulus of log(2), i.e. the "n" described above.
310
- fx = _mm256_floor_pd(fx);
311
-
312
- // Get the remainder modulo log(2), i.e. the "g" described above. Subtract
313
- // n*log(2) out in two steps, i.e. n*C1 + n*C2, C1+C2=log2 to get the last
314
- // digits right.
315
- tmp = pmul(fx, p4d_cephes_exp_C1);
316
- Packet4d z = pmul(fx, p4d_cephes_exp_C2);
317
- x = psub(x, tmp);
318
- x = psub(x, z);
319
-
320
- Packet4d x2 = pmul(x, x);
321
-
322
- // Evaluate the numerator polynomial of the rational interpolant.
323
- Packet4d px = p4d_cephes_exp_p0;
324
- px = pmadd(px, x2, p4d_cephes_exp_p1);
325
- px = pmadd(px, x2, p4d_cephes_exp_p2);
326
- px = pmul(px, x);
327
-
328
- // Evaluate the denominator polynomial of the rational interpolant.
329
- Packet4d qx = p4d_cephes_exp_q0;
330
- qx = pmadd(qx, x2, p4d_cephes_exp_q1);
331
- qx = pmadd(qx, x2, p4d_cephes_exp_q2);
332
- qx = pmadd(qx, x2, p4d_cephes_exp_q3);
333
-
334
- // I don't really get this bit, copied from the SSE2 routines, so...
335
- // TODO(gonnet): Figure out what is going on here, perhaps find a better
336
- // rational interpolant?
337
- x = _mm256_div_pd(px, psub(qx, px));
338
- x = pmadd(p4d_2, x, p4d_1);
339
-
340
- // Build e=2^n by constructing the exponents in a 128-bit vector and
341
- // shifting them to where they belong in double-precision values.
342
- __m128i emm0 = _mm256_cvtpd_epi32(fx);
343
- emm0 = _mm_add_epi32(emm0, p4i_1023);
344
- emm0 = _mm_shuffle_epi32(emm0, _MM_SHUFFLE(3, 1, 2, 0));
345
- __m128i lo = _mm_slli_epi64(emm0, 52);
346
- __m128i hi = _mm_slli_epi64(_mm_srli_epi64(emm0, 32), 52);
347
- __m256i e = _mm256_insertf128_si256(_mm256_setzero_si256(), lo, 0);
348
- e = _mm256_insertf128_si256(e, hi, 1);
349
-
350
- // Construct the result 2^n * exp(g) = e * x. The max is used to catch
351
- // non-finite values in the input.
352
- return pmax(pmul(x, _mm256_castsi256_pd(e)), _x);
87
+ return pexp_double(_x);
353
88
  }
354
89
 
355
90
  // Functions for sqrt.
@@ -362,37 +97,39 @@ pexp<Packet4d>(const Packet4d& _x) {
362
97
  // For detail see here: http://www.beyond3d.com/content/articles/8/
363
98
  #if EIGEN_FAST_MATH
364
99
  template <>
365
- EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED Packet8f
366
- psqrt<Packet8f>(const Packet8f& _x) {
367
- Packet8f half = pmul(_x, pset1<Packet8f>(.5f));
368
- Packet8f denormal_mask = _mm256_and_ps(
369
- _mm256_cmp_ps(_x, pset1<Packet8f>((std::numeric_limits<float>::min)()),
370
- _CMP_LT_OQ),
371
- _mm256_cmp_ps(_x, _mm256_setzero_ps(), _CMP_GE_OQ));
100
+ EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
101
+ Packet8f psqrt<Packet8f>(const Packet8f& _x) {
102
+ Packet8f minus_half_x = pmul(_x, pset1<Packet8f>(-0.5f));
103
+ Packet8f denormal_mask = pandnot(
104
+ pcmp_lt(_x, pset1<Packet8f>((std::numeric_limits<float>::min)())),
105
+ pcmp_lt(_x, pzero(_x)));
372
106
 
373
107
  // Compute approximate reciprocal sqrt.
374
108
  Packet8f x = _mm256_rsqrt_ps(_x);
375
109
  // Do a single step of Newton's iteration.
376
- x = pmul(x, psub(pset1<Packet8f>(1.5f), pmul(half, pmul(x,x))));
110
+ x = pmul(x, pmadd(minus_half_x, pmul(x,x), pset1<Packet8f>(1.5f)));
377
111
  // Flush results for denormals to zero.
378
- return _mm256_andnot_ps(denormal_mask, pmul(_x,x));
112
+ return pandnot(pmul(_x,x), denormal_mask);
379
113
  }
114
+
380
115
  #else
116
+
381
117
  template <> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
382
- Packet8f psqrt<Packet8f>(const Packet8f& x) {
383
- return _mm256_sqrt_ps(x);
118
+ Packet8f psqrt<Packet8f>(const Packet8f& _x) {
119
+ return _mm256_sqrt_ps(_x);
384
120
  }
121
+
385
122
  #endif
123
+
386
124
  template <> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
387
- Packet4d psqrt<Packet4d>(const Packet4d& x) {
388
- return _mm256_sqrt_pd(x);
125
+ Packet4d psqrt<Packet4d>(const Packet4d& _x) {
126
+ return _mm256_sqrt_pd(_x);
389
127
  }
390
- #if EIGEN_FAST_MATH
391
128
 
129
+ #if EIGEN_FAST_MATH
392
130
  template<> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
393
131
  Packet8f prsqrt<Packet8f>(const Packet8f& _x) {
394
132
  _EIGEN_DECLARE_CONST_Packet8f_FROM_INT(inf, 0x7f800000);
395
- _EIGEN_DECLARE_CONST_Packet8f_FROM_INT(nan, 0x7fc00000);
396
133
  _EIGEN_DECLARE_CONST_Packet8f(one_point_five, 1.5f);
397
134
  _EIGEN_DECLARE_CONST_Packet8f(minus_half, -0.5f);
398
135
  _EIGEN_DECLARE_CONST_Packet8f_FROM_INT(flt_min, 0x00800000);
@@ -401,36 +138,88 @@ Packet8f prsqrt<Packet8f>(const Packet8f& _x) {
401
138
 
402
139
  // select only the inverse sqrt of positive normal inputs (denormals are
403
140
  // flushed to zero and cause infs as well).
404
- Packet8f le_zero_mask = _mm256_cmp_ps(_x, p8f_flt_min, _CMP_LT_OQ);
405
- Packet8f x = _mm256_andnot_ps(le_zero_mask, _mm256_rsqrt_ps(_x));
406
-
407
- // Fill in NaNs and Infs for the negative/zero entries.
408
- Packet8f neg_mask = _mm256_cmp_ps(_x, _mm256_setzero_ps(), _CMP_LT_OQ);
409
- Packet8f zero_mask = _mm256_andnot_ps(neg_mask, le_zero_mask);
410
- Packet8f infs_and_nans = _mm256_or_ps(_mm256_and_ps(neg_mask, p8f_nan),
411
- _mm256_and_ps(zero_mask, p8f_inf));
412
-
413
- // Do a single step of Newton's iteration.
414
- x = pmul(x, pmadd(neg_half, pmul(x, x), p8f_one_point_five));
415
-
416
- // Insert NaNs and Infs in all the right places.
417
- return _mm256_or_ps(x, infs_and_nans);
141
+ Packet8f lt_min_mask = _mm256_cmp_ps(_x, p8f_flt_min, _CMP_LT_OQ);
142
+ Packet8f inf_mask = _mm256_cmp_ps(_x, p8f_inf, _CMP_EQ_OQ);
143
+ Packet8f not_normal_finite_mask = _mm256_or_ps(lt_min_mask, inf_mask);
144
+
145
+ // Compute an approximate result using the rsqrt intrinsic.
146
+ Packet8f y_approx = _mm256_rsqrt_ps(_x);
147
+
148
+ // Do a single step of Newton-Raphson iteration to improve the approximation.
149
+ // This uses the formula y_{n+1} = y_n * (1.5 - y_n * (0.5 * x) * y_n).
150
+ // It is essential to evaluate the inner term like this because forming
151
+ // y_n^2 may over- or underflow.
152
+ Packet8f y_newton = pmul(y_approx, pmadd(y_approx, pmul(neg_half, y_approx), p8f_one_point_five));
153
+
154
+ // Select the result of the Newton-Raphson step for positive normal arguments.
155
+ // For other arguments, choose the output of the intrinsic. This will
156
+ // return rsqrt(+inf) = 0, rsqrt(x) = NaN if x < 0, and rsqrt(x) = +inf if
157
+ // x is zero or a positive denormalized float (equivalent to flushing positive
158
+ // denormalized inputs to zero).
159
+ return pselect<Packet8f>(not_normal_finite_mask, y_approx, y_newton);
418
160
  }
419
161
 
420
162
  #else
421
163
  template <> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
422
- Packet8f prsqrt<Packet8f>(const Packet8f& x) {
164
+ Packet8f prsqrt<Packet8f>(const Packet8f& _x) {
423
165
  _EIGEN_DECLARE_CONST_Packet8f(one, 1.0f);
424
- return _mm256_div_ps(p8f_one, _mm256_sqrt_ps(x));
166
+ return _mm256_div_ps(p8f_one, _mm256_sqrt_ps(_x));
425
167
  }
426
168
  #endif
427
169
 
428
170
  template <> EIGEN_DEFINE_FUNCTION_ALLOWING_MULTIPLE_DEFINITIONS EIGEN_UNUSED
429
- Packet4d prsqrt<Packet4d>(const Packet4d& x) {
171
+ Packet4d prsqrt<Packet4d>(const Packet4d& _x) {
430
172
  _EIGEN_DECLARE_CONST_Packet4d(one, 1.0);
431
- return _mm256_div_pd(p4d_one, _mm256_sqrt_pd(x));
173
+ return _mm256_div_pd(p4d_one, _mm256_sqrt_pd(_x));
432
174
  }
433
175
 
176
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, psin)
177
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, pcos)
178
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, plog)
179
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, plog2)
180
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, plog1p)
181
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, pexpm1)
182
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, pexp)
183
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, ptanh)
184
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, psqrt)
185
+ F16_PACKET_FUNCTION(Packet8f, Packet8h, prsqrt)
186
+
187
+ template <>
188
+ EIGEN_STRONG_INLINE Packet8h pfrexp(const Packet8h& a, Packet8h& exponent) {
189
+ Packet8f fexponent;
190
+ const Packet8h out = float2half(pfrexp<Packet8f>(half2float(a), fexponent));
191
+ exponent = float2half(fexponent);
192
+ return out;
193
+ }
194
+
195
+ template <>
196
+ EIGEN_STRONG_INLINE Packet8h pldexp(const Packet8h& a, const Packet8h& exponent) {
197
+ return float2half(pldexp<Packet8f>(half2float(a), half2float(exponent)));
198
+ }
199
+
200
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, psin)
201
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, pcos)
202
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, plog)
203
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, plog2)
204
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, plog1p)
205
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, pexpm1)
206
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, pexp)
207
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, ptanh)
208
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, psqrt)
209
+ BF16_PACKET_FUNCTION(Packet8f, Packet8bf, prsqrt)
210
+
211
+ template <>
212
+ EIGEN_STRONG_INLINE Packet8bf pfrexp(const Packet8bf& a, Packet8bf& exponent) {
213
+ Packet8f fexponent;
214
+ const Packet8bf out = F32ToBf16(pfrexp<Packet8f>(Bf16ToF32(a), fexponent));
215
+ exponent = F32ToBf16(fexponent);
216
+ return out;
217
+ }
218
+
219
+ template <>
220
+ EIGEN_STRONG_INLINE Packet8bf pldexp(const Packet8bf& a, const Packet8bf& exponent) {
221
+ return F32ToBf16(pldexp<Packet8f>(Bf16ToF32(a), Bf16ToF32(exponent)));
222
+ }
434
223
 
435
224
  } // end namespace internal
436
225