tomoto 0.2.2 → 0.3.0

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Files changed (369) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +10 -0
  3. data/README.md +8 -10
  4. data/ext/tomoto/ct.cpp +11 -11
  5. data/ext/tomoto/dmr.cpp +14 -13
  6. data/ext/tomoto/dt.cpp +14 -14
  7. data/ext/tomoto/extconf.rb +7 -5
  8. data/ext/tomoto/gdmr.cpp +7 -7
  9. data/ext/tomoto/hdp.cpp +9 -9
  10. data/ext/tomoto/hlda.cpp +13 -13
  11. data/ext/tomoto/hpa.cpp +5 -5
  12. data/ext/tomoto/lda.cpp +42 -39
  13. data/ext/tomoto/llda.cpp +6 -6
  14. data/ext/tomoto/mglda.cpp +15 -15
  15. data/ext/tomoto/pa.cpp +6 -6
  16. data/ext/tomoto/plda.cpp +6 -6
  17. data/ext/tomoto/slda.cpp +8 -8
  18. data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
  19. data/ext/tomoto/utils.h +16 -70
  20. data/lib/tomoto/version.rb +1 -1
  21. data/lib/tomoto.rb +5 -1
  22. data/vendor/EigenRand/EigenRand/Core.h +10 -10
  23. data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
  24. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
  25. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
  26. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
  27. data/vendor/EigenRand/EigenRand/EigenRand +11 -6
  28. data/vendor/EigenRand/EigenRand/Macro.h +13 -7
  29. data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
  30. data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
  31. data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
  32. data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
  33. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
  34. data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
  35. data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
  36. data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
  37. data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
  38. data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
  39. data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
  40. data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
  41. data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
  42. data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
  43. data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
  44. data/vendor/EigenRand/EigenRand/doc.h +24 -12
  45. data/vendor/EigenRand/README.md +57 -4
  46. data/vendor/eigen/COPYING.APACHE +203 -0
  47. data/vendor/eigen/COPYING.BSD +1 -1
  48. data/vendor/eigen/COPYING.MINPACK +51 -52
  49. data/vendor/eigen/Eigen/Cholesky +0 -1
  50. data/vendor/eigen/Eigen/Core +112 -265
  51. data/vendor/eigen/Eigen/Eigenvalues +2 -3
  52. data/vendor/eigen/Eigen/Geometry +5 -8
  53. data/vendor/eigen/Eigen/Householder +0 -1
  54. data/vendor/eigen/Eigen/Jacobi +0 -1
  55. data/vendor/eigen/Eigen/KLUSupport +41 -0
  56. data/vendor/eigen/Eigen/LU +2 -5
  57. data/vendor/eigen/Eigen/OrderingMethods +0 -3
  58. data/vendor/eigen/Eigen/PaStiXSupport +1 -0
  59. data/vendor/eigen/Eigen/PardisoSupport +0 -0
  60. data/vendor/eigen/Eigen/QR +2 -3
  61. data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
  62. data/vendor/eigen/Eigen/SVD +0 -1
  63. data/vendor/eigen/Eigen/Sparse +0 -2
  64. data/vendor/eigen/Eigen/SparseCholesky +0 -8
  65. data/vendor/eigen/Eigen/SparseLU +4 -0
  66. data/vendor/eigen/Eigen/SparseQR +0 -1
  67. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
  68. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
  69. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
  70. data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
  71. data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
  72. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
  73. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
  74. data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
  75. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
  76. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
  77. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
  78. data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
  79. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
  80. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
  81. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
  82. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
  84. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
  85. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
  86. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
  87. data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
  88. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
  89. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
  90. data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
  91. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
  92. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
  93. data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
  94. data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
  95. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
  96. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
  97. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
  98. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
  99. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
  100. data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
  101. data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
  102. data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
  103. data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
  104. data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
  105. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
  106. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
  107. data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
  108. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
  109. data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
  110. data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
  111. data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
  112. data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  113. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
  114. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
  115. data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
  116. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
  117. data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
  118. data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
  119. data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
  120. data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
  121. data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
  122. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
  123. data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
  124. data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
  125. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
  126. data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
  127. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
  128. data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
  129. data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
  130. data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
  131. data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
  132. data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
  133. data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
  134. data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
  135. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
  136. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
  137. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
  138. data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
  139. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
  140. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
  141. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
  142. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
  143. data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
  145. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
  146. data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
  148. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
  149. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
  153. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
  154. data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
  156. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
  160. data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  161. data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
  162. data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  163. data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  164. data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  165. data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  166. data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  167. data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  168. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
  169. data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  170. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
  171. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
  172. data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  173. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
  174. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
  175. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
  176. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
  177. data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  178. data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  179. data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  180. data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  181. data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  182. data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  183. data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  184. data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  185. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
  186. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
  187. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
  188. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
  189. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
  190. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
  191. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
  192. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
  193. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
  194. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
  195. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
  196. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
  197. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
  198. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
  199. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
  200. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
  201. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
  202. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
  203. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
  204. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
  205. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
  206. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
  207. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
  208. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
  209. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
  210. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
  211. data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  212. data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
  213. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
  214. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
  215. data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  216. data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
  217. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
  218. data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
  219. data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
  220. data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
  221. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
  222. data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  223. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
  224. data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  225. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
  226. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
  227. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
  228. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
  229. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
  230. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
  231. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
  232. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
  233. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
  234. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
  235. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
  236. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
  237. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
  238. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
  239. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
  240. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
  241. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
  242. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
  243. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
  244. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
  245. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
  246. data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
  247. data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
  248. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
  249. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  250. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
  251. data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
  252. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
  253. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
  254. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
  255. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
  256. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
  257. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
  258. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
  259. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
  260. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
  261. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
  262. data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  263. data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
  264. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
  265. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
  266. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
  267. data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
  268. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
  269. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
  270. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
  271. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
  272. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
  273. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
  274. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
  275. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
  276. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
  277. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
  278. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
  279. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
  280. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
  281. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
  282. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
  283. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
  284. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
  285. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
  295. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
  296. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
  297. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
  298. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
  299. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
  300. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
  303. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
  304. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
  306. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
  307. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
  308. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
  309. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
  310. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
  311. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
  312. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
  313. data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
  314. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
  315. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
  316. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
  317. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
  318. data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  319. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
  320. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
  321. data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
  322. data/vendor/eigen/README.md +2 -0
  323. data/vendor/eigen/bench/btl/README +1 -1
  324. data/vendor/eigen/bench/tensors/README +6 -7
  325. data/vendor/eigen/ci/README.md +56 -0
  326. data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
  327. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
  328. data/vendor/eigen/unsupported/README.txt +1 -1
  329. data/vendor/tomotopy/README.kr.rst +78 -0
  330. data/vendor/tomotopy/README.rst +75 -0
  331. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
  332. data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
  333. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
  334. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
  335. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
  336. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
  337. data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
  338. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
  339. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
  340. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
  341. data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
  342. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
  343. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
  344. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
  345. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
  346. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
  347. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
  348. data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
  349. data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
  350. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
  351. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
  352. data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
  353. data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
  354. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
  355. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
  356. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
  357. data/vendor/tomotopy/src/Utils/exception.h +6 -0
  358. data/vendor/tomotopy/src/Utils/math.h +2 -2
  359. data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
  360. data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
  361. data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
  362. metadata +64 -18
  363. data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
  364. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
  365. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
  366. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
  367. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
  368. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
  369. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -10,7 +10,7 @@ namespace tomoto
10
10
  template<typename _Ty = float>
11
11
  struct MultiNormalDistribution
12
12
  {
13
- static constexpr _Ty log2pi = 1.83787706641;
13
+ static constexpr _Ty log2pi = (_Ty)1.83787706641;
14
14
  Eigen::Matrix<_Ty, -1, 1> mean;
15
15
  Eigen::Matrix<_Ty, -1, -1> cov, l;
16
16
  _Ty logDet = 0;
@@ -58,7 +58,7 @@ namespace tomoto
58
58
  }
59
59
  else
60
60
  {
61
- z[j] = rtnorm::rtnorm(rng, lower_pos, upper_pos);
61
+ z[j] = (_Ty)rtnorm::rtnorm(rng, lower_pos, upper_pos);
62
62
  }
63
63
  }
64
64
  }
@@ -22,6 +22,12 @@ namespace tomoto
22
22
  public:
23
23
  using std::invalid_argument::invalid_argument;
24
24
  };
25
+
26
+ class EmptyWordArgument : public InvalidArgument
27
+ {
28
+ public:
29
+ using InvalidArgument::InvalidArgument;
30
+ };
25
31
  }
26
32
  }
27
33
 
@@ -141,9 +141,9 @@ namespace tomoto
141
141
  float forSmall(float x)
142
142
  {
143
143
  if (x == 0) return -INFINITY;
144
- return log(x + 2) - 0.5f / (x + 2) - 1 / 12.f / pow(x + 2, 2) - 1 / (x + 1) - 1 / x;
144
+ return logf(x + 2) - 0.5f / (x + 2) - 1 / 12.f / powf(x + 2, 2) - 1 / (x + 1) - 1 / x;
145
145
  }
146
- float forLarge(float x) { return log(x) - 0.5f / x - 1 / 12.f / pow(x, 2); }
146
+ float forLarge(float x) { return logf(x) - 0.5f / x - 1 / 12.f / powf(x, 2); }
147
147
  float forNonFinite(float x) { if (std::isnan(x) || x < 0) return NAN; return INFINITY;}
148
148
  };
149
149
 
@@ -1,10 +1,8 @@
1
1
  #pragma once
2
2
 
3
3
  #include <random>
4
- #ifdef __AVX__
4
+ #if defined(__AVX__) || defined(__SSE2__)
5
5
  #include <immintrin.h>
6
- #elif defined(__SSE2__) || defined(_WIN64)
7
- #include <xmmintrin.h>
8
6
  #else
9
7
 
10
8
  #endif
@@ -23,17 +21,21 @@ namespace tomoto
23
21
  return __popcnt(i);
24
22
  }
25
23
 
26
- #ifdef _WIN64
24
+ #ifdef _WIN64
27
25
  inline uint64_t log2_ceil(uint64_t i)
28
26
  {
29
- return 64 - __lzcnt64(i) - ((i & (i - 1)) == 0 ? 1 : 0);
27
+ unsigned long idx;
28
+ if (!_BitScanReverse64(&idx, i)) return 0;
29
+ return idx + 1 - ((i & (i - 1)) == 0 ? 1 : 0);
30
30
  }
31
- #else
31
+ #else
32
32
  inline uint32_t log2_ceil(uint32_t i)
33
33
  {
34
- return 32 - __lzcnt(i) - ((i & (i - 1)) == 0 ? 1 : 0);
34
+ unsigned long idx;
35
+ if (!_BitScanReverse(&idx, i)) return 0;
36
+ return idx + 1 - ((i & (i - 1)) == 0 ? 1 : 0);
35
37
  }
36
- #endif
38
+ #endif
37
39
 
38
40
  #else
39
41
  inline uint32_t popcnt(uint32_t i)
@@ -41,22 +43,22 @@ namespace tomoto
41
43
  return __builtin_popcount(i);
42
44
  }
43
45
 
44
- #ifdef __x86_64
46
+ #ifdef __x86_64
45
47
  inline uint64_t log2_ceil(uint64_t i)
46
48
  {
47
49
  return 64 - __builtin_clzll(i) - ((i & (i - 1)) == 0 ? 1 : 0);
48
50
  }
49
- #else
51
+ #else
50
52
  inline uint32_t log2_ceil(uint32_t i)
51
53
  {
52
54
  return 32 - __builtin_clz(i) - ((i & (i - 1)) == 0 ? 1 : 0);
53
55
  }
54
- #endif
56
+ #endif
55
57
 
56
58
  #endif
57
59
 
58
60
 
59
- #if defined(__SSE2__) || defined(_WIN64)
61
+ #if defined(__SSE2__)
60
62
  inline __m128 scan_SSE(__m128 x)
61
63
  {
62
64
  x = _mm_add_ps(x, _mm_castsi128_ps(_mm_slli_si128(_mm_castps_si128(x), 4)));
@@ -89,7 +89,7 @@ namespace tomoto
89
89
  template<> struct gen_seq<1> : seq<0> {};
90
90
 
91
91
  template <size_t _n, size_t ... _is>
92
- std::array<char, _n - 1> to_array(const char(&a)[_n], seq<_is...>)
92
+ constexpr std::array<char, sizeof... (_is)> to_array(const char(&a)[_n], seq<_is...>)
93
93
  {
94
94
  return { {a[_is]...} };
95
95
  }
@@ -101,7 +101,13 @@ namespace tomoto
101
101
  }
102
102
 
103
103
  template <size_t _n, size_t ... _is>
104
- std::array<char, _n> to_arrayz(const char(&a)[_n], seq<_is...>)
104
+ constexpr std::array<char, sizeof... (_is) + 1> to_arrayz(const char(&a)[_n], seq<_is...>)
105
+ {
106
+ return { {a[_is]..., 0} };
107
+ }
108
+
109
+ template <size_t _n, size_t ... _is>
110
+ constexpr std::array<char, sizeof... (_is) + 1> to_arrayz(const std::array<char, _n>& a, seq<_is...>)
105
111
  {
106
112
  return { {a[_is]..., 0} };
107
113
  }
@@ -132,17 +138,24 @@ namespace tomoto
132
138
  return std::string{ m.begin(), m.end() };
133
139
  }
134
140
 
135
- Key(const std::array<char, _len>& _m) : m(_m)
141
+ constexpr Key(const std::array<char, _len>& _m) : m(_m)
136
142
  {
137
143
  }
138
144
 
139
- Key(std::array<char, _len>&& _m) : m(_m)
145
+ constexpr Key(std::array<char, _len>&& _m) : m(_m)
140
146
  {
141
147
  }
142
148
 
143
- Key(const char(&a)[_len + 1]) : Key{ detail::to_array(a) }
149
+ constexpr Key(const char(&a)[_len + 1]) : Key{ detail::to_array(a) }
144
150
  {
145
151
  }
152
+
153
+ constexpr char operator[](size_t n) const
154
+ {
155
+ return n < _len ? m[n] : throw std::out_of_range("");
156
+ }
157
+
158
+ constexpr size_t size() const { return _len; }
146
159
  };
147
160
 
148
161
  template<typename _Ty>
@@ -161,12 +174,24 @@ namespace tomoto
161
174
  return Key<_n - 1>{detail::to_array(a)};
162
175
  }
163
176
 
177
+ template<size_t _n>
178
+ constexpr Key<_n> to_key(const Key<_n>& key)
179
+ {
180
+ return key;
181
+ }
182
+
164
183
  template<size_t _n>
165
184
  constexpr Key<_n> to_keyz(const char(&a)[_n])
166
185
  {
167
186
  return Key<_n>{detail::to_arrayz(a)};
168
187
  }
169
188
 
189
+ template<size_t _n>
190
+ constexpr Key<_n + 1> to_keyz(const Key<_n>& key)
191
+ {
192
+ return Key<_n + 1>{detail::to_arrayz(key.m, detail::GenSeq<_n>{})};
193
+ }
194
+
170
195
  template<typename _Ty, typename = void>
171
196
  struct Serializer;
172
197
 
@@ -1,7 +1,4 @@
1
1
  #pragma once
2
- #if _WIN64 || __x86_64__
3
- #define __SSE2__
4
- #endif
5
2
  #include "sse_mathfun.h"
6
3
 
7
4
  // approximation : lgamma(z) ~= (z+2.5)ln(z+3) - z - 3 + 0.5 ln (2pi) + 1/12/(z + 3) - ln (z(z+1)(z+2))
metadata CHANGED
@@ -1,29 +1,29 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: tomoto
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.2.2
4
+ version: 0.3.0
5
5
  platform: ruby
6
6
  authors:
7
7
  - Andrew Kane
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2021-08-24 00:00:00.000000000 Z
11
+ date: 2022-10-04 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: rice
15
15
  requirement: !ruby/object:Gem::Requirement
16
16
  requirements:
17
- - - "~>"
17
+ - - ">="
18
18
  - !ruby/object:Gem::Version
19
- version: '3'
19
+ version: '4'
20
20
  type: :runtime
21
21
  prerelease: false
22
22
  version_requirements: !ruby/object:Gem::Requirement
23
23
  requirements:
24
- - - "~>"
24
+ - - ">="
25
25
  - !ruby/object:Gem::Version
26
- version: '3'
26
+ version: '4'
27
27
  description:
28
28
  email: andrew@ankane.org
29
29
  executables: []
@@ -37,7 +37,6 @@ files:
37
37
  - ext/tomoto/ct.cpp
38
38
  - ext/tomoto/dmr.cpp
39
39
  - ext/tomoto/dt.cpp
40
- - ext/tomoto/ext.cpp
41
40
  - ext/tomoto/extconf.rb
42
41
  - ext/tomoto/gdmr.cpp
43
42
  - ext/tomoto/hdp.cpp
@@ -49,6 +48,7 @@ files:
49
48
  - ext/tomoto/pa.cpp
50
49
  - ext/tomoto/plda.cpp
51
50
  - ext/tomoto/slda.cpp
51
+ - ext/tomoto/tomoto.cpp
52
52
  - ext/tomoto/utils.h
53
53
  - lib/tomoto.rb
54
54
  - lib/tomoto/ct.rb
@@ -78,16 +78,25 @@ files:
78
78
  - vendor/EigenRand/EigenRand/PacketFilter.h
79
79
  - vendor/EigenRand/EigenRand/PacketRandomEngine.h
80
80
  - vendor/EigenRand/EigenRand/RandUtils.h
81
+ - vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h
82
+ - vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h
83
+ - vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h
84
+ - vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h
85
+ - vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h
86
+ - vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h
87
+ - vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h
88
+ - vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h
89
+ - vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h
81
90
  - vendor/EigenRand/EigenRand/doc.h
82
91
  - vendor/EigenRand/LICENSE
83
92
  - vendor/EigenRand/README.md
93
+ - vendor/eigen/COPYING.APACHE
84
94
  - vendor/eigen/COPYING.BSD
85
95
  - vendor/eigen/COPYING.GPL
86
96
  - vendor/eigen/COPYING.LGPL
87
97
  - vendor/eigen/COPYING.MINPACK
88
98
  - vendor/eigen/COPYING.MPL2
89
99
  - vendor/eigen/COPYING.README
90
- - vendor/eigen/Eigen/CMakeLists.txt
91
100
  - vendor/eigen/Eigen/Cholesky
92
101
  - vendor/eigen/Eigen/CholmodSupport
93
102
  - vendor/eigen/Eigen/Core
@@ -98,6 +107,7 @@ files:
98
107
  - vendor/eigen/Eigen/Householder
99
108
  - vendor/eigen/Eigen/IterativeLinearSolvers
100
109
  - vendor/eigen/Eigen/Jacobi
110
+ - vendor/eigen/Eigen/KLUSupport
101
111
  - vendor/eigen/Eigen/LU
102
112
  - vendor/eigen/Eigen/MetisSupport
103
113
  - vendor/eigen/Eigen/OrderingMethods
@@ -121,6 +131,7 @@ files:
121
131
  - vendor/eigen/Eigen/src/Cholesky/LLT.h
122
132
  - vendor/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h
123
133
  - vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h
134
+ - vendor/eigen/Eigen/src/Core/ArithmeticSequence.h
124
135
  - vendor/eigen/Eigen/src/Core/Array.h
125
136
  - vendor/eigen/Eigen/src/Core/ArrayBase.h
126
137
  - vendor/eigen/Eigen/src/Core/ArrayWrapper.h
@@ -153,6 +164,7 @@ files:
153
164
  - vendor/eigen/Eigen/src/Core/GenericPacketMath.h
154
165
  - vendor/eigen/Eigen/src/Core/GlobalFunctions.h
155
166
  - vendor/eigen/Eigen/src/Core/IO.h
167
+ - vendor/eigen/Eigen/src/Core/IndexedView.h
156
168
  - vendor/eigen/Eigen/src/Core/Inverse.h
157
169
  - vendor/eigen/Eigen/src/Core/Map.h
158
170
  - vendor/eigen/Eigen/src/Core/MapBase.h
@@ -163,6 +175,7 @@ files:
163
175
  - vendor/eigen/Eigen/src/Core/NestByValue.h
164
176
  - vendor/eigen/Eigen/src/Core/NoAlias.h
165
177
  - vendor/eigen/Eigen/src/Core/NumTraits.h
178
+ - vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h
166
179
  - vendor/eigen/Eigen/src/Core/PermutationMatrix.h
167
180
  - vendor/eigen/Eigen/src/Core/PlainObjectBase.h
168
181
  - vendor/eigen/Eigen/src/Core/Product.h
@@ -171,6 +184,7 @@ files:
171
184
  - vendor/eigen/Eigen/src/Core/Redux.h
172
185
  - vendor/eigen/Eigen/src/Core/Ref.h
173
186
  - vendor/eigen/Eigen/src/Core/Replicate.h
187
+ - vendor/eigen/Eigen/src/Core/Reshaped.h
174
188
  - vendor/eigen/Eigen/src/Core/ReturnByValue.h
175
189
  - vendor/eigen/Eigen/src/Core/Reverse.h
176
190
  - vendor/eigen/Eigen/src/Core/Select.h
@@ -180,6 +194,7 @@ files:
180
194
  - vendor/eigen/Eigen/src/Core/SolveTriangular.h
181
195
  - vendor/eigen/Eigen/src/Core/SolverBase.h
182
196
  - vendor/eigen/Eigen/src/Core/StableNorm.h
197
+ - vendor/eigen/Eigen/src/Core/StlIterators.h
183
198
  - vendor/eigen/Eigen/src/Core/Stride.h
184
199
  - vendor/eigen/Eigen/src/Core/Swap.h
185
200
  - vendor/eigen/Eigen/src/Core/Transpose.h
@@ -192,26 +207,48 @@ files:
192
207
  - vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h
193
208
  - vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h
194
209
  - vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h
210
+ - vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h
195
211
  - vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h
196
212
  - vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h
213
+ - vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h
197
214
  - vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h
198
215
  - vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h
216
+ - vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
217
+ - vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
218
+ - vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
199
219
  - vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h
200
220
  - vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h
201
- - vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h
202
- - vendor/eigen/Eigen/src/Core/arch/CUDA/MathFunctions.h
203
- - vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h
204
- - vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h
205
- - vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h
221
+ - vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h
206
222
  - vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h
223
+ - vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h
224
+ - vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h
225
+ - vendor/eigen/Eigen/src/Core/arch/Default/Half.h
207
226
  - vendor/eigen/Eigen/src/Core/arch/Default/Settings.h
227
+ - vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h
228
+ - vendor/eigen/Eigen/src/Core/arch/GPU/MathFunctions.h
229
+ - vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h
230
+ - vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h
231
+ - vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h
232
+ - vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h
233
+ - vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h
234
+ - vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h
208
235
  - vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h
236
+ - vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
209
237
  - vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h
210
238
  - vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h
239
+ - vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h
211
240
  - vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h
212
241
  - vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h
213
242
  - vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h
214
243
  - vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h
244
+ - vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h
245
+ - vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h
246
+ - vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h
247
+ - vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h
248
+ - vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h
249
+ - vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h
250
+ - vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
251
+ - vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h
215
252
  - vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h
216
253
  - vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h
217
254
  - vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h
@@ -243,16 +280,21 @@ files:
243
280
  - vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h
244
281
  - vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h
245
282
  - vendor/eigen/Eigen/src/Core/util/BlasUtil.h
283
+ - vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h
246
284
  - vendor/eigen/Eigen/src/Core/util/Constants.h
247
285
  - vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h
248
286
  - vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h
287
+ - vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h
288
+ - vendor/eigen/Eigen/src/Core/util/IntegralConstant.h
249
289
  - vendor/eigen/Eigen/src/Core/util/MKL_support.h
250
290
  - vendor/eigen/Eigen/src/Core/util/Macros.h
251
291
  - vendor/eigen/Eigen/src/Core/util/Memory.h
252
292
  - vendor/eigen/Eigen/src/Core/util/Meta.h
253
293
  - vendor/eigen/Eigen/src/Core/util/NonMPL2.h
254
294
  - vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h
295
+ - vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h
255
296
  - vendor/eigen/Eigen/src/Core/util/StaticAssert.h
297
+ - vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h
256
298
  - vendor/eigen/Eigen/src/Core/util/XprHelper.h
257
299
  - vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h
258
300
  - vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h
@@ -282,7 +324,7 @@ files:
282
324
  - vendor/eigen/Eigen/src/Geometry/Transform.h
283
325
  - vendor/eigen/Eigen/src/Geometry/Translation.h
284
326
  - vendor/eigen/Eigen/src/Geometry/Umeyama.h
285
- - vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h
327
+ - vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h
286
328
  - vendor/eigen/Eigen/src/Householder/BlockHouseholder.h
287
329
  - vendor/eigen/Eigen/src/Householder/Householder.h
288
330
  - vendor/eigen/Eigen/src/Householder/HouseholderSequence.h
@@ -295,12 +337,13 @@ files:
295
337
  - vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h
296
338
  - vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h
297
339
  - vendor/eigen/Eigen/src/Jacobi/Jacobi.h
340
+ - vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h
298
341
  - vendor/eigen/Eigen/src/LU/Determinant.h
299
342
  - vendor/eigen/Eigen/src/LU/FullPivLU.h
300
343
  - vendor/eigen/Eigen/src/LU/InverseImpl.h
301
344
  - vendor/eigen/Eigen/src/LU/PartialPivLU.h
302
345
  - vendor/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h
303
- - vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h
346
+ - vendor/eigen/Eigen/src/LU/arch/InverseSize4.h
304
347
  - vendor/eigen/Eigen/src/MetisSupport/MetisSupport.h
305
348
  - vendor/eigen/Eigen/src/OrderingMethods/Amd.h
306
349
  - vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h
@@ -387,14 +430,17 @@ files:
387
430
  - vendor/eigen/Eigen/src/plugins/BlockMethods.h
388
431
  - vendor/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h
389
432
  - vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h
433
+ - vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h
390
434
  - vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h
391
435
  - vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h
436
+ - vendor/eigen/Eigen/src/plugins/ReshapedMethods.h
392
437
  - vendor/eigen/README.md
393
438
  - vendor/eigen/bench/README.txt
394
439
  - vendor/eigen/bench/btl/COPYING
395
440
  - vendor/eigen/bench/btl/README
396
441
  - vendor/eigen/bench/tensors/README
397
442
  - vendor/eigen/blas/README.txt
443
+ - vendor/eigen/ci/README.md
398
444
  - vendor/eigen/demos/mandelbrot/README
399
445
  - vendor/eigen/demos/mix_eigen_and_c/README
400
446
  - vendor/eigen/demos/opengl/README
@@ -487,7 +533,7 @@ files:
487
533
  - vendor/variant/include/mapbox/recursive_wrapper.hpp
488
534
  - vendor/variant/include/mapbox/variant.hpp
489
535
  - vendor/variant/include/mapbox/variant_io.hpp
490
- homepage: https://github.com/ankane/tomoto
536
+ homepage: https://github.com/ankane/tomoto-ruby
491
537
  licenses:
492
538
  - MIT
493
539
  metadata: {}
@@ -499,14 +545,14 @@ required_ruby_version: !ruby/object:Gem::Requirement
499
545
  requirements:
500
546
  - - ">="
501
547
  - !ruby/object:Gem::Version
502
- version: '2.6'
548
+ version: '2.7'
503
549
  required_rubygems_version: !ruby/object:Gem::Requirement
504
550
  requirements:
505
551
  - - ">="
506
552
  - !ruby/object:Gem::Version
507
553
  version: '0'
508
554
  requirements: []
509
- rubygems_version: 3.2.22
555
+ rubygems_version: 3.3.7
510
556
  signing_key:
511
557
  specification_version: 4
512
558
  summary: High performance topic modeling for Ruby
@@ -1,19 +0,0 @@
1
- include(RegexUtils)
2
- test_escape_string_as_regex()
3
-
4
- file(GLOB Eigen_directory_files "*")
5
-
6
- escape_string_as_regex(ESCAPED_CMAKE_CURRENT_SOURCE_DIR "${CMAKE_CURRENT_SOURCE_DIR}")
7
-
8
- foreach(f ${Eigen_directory_files})
9
- if(NOT f MATCHES "\\.txt" AND NOT f MATCHES "${ESCAPED_CMAKE_CURRENT_SOURCE_DIR}/[.].+" AND NOT f MATCHES "${ESCAPED_CMAKE_CURRENT_SOURCE_DIR}/src")
10
- list(APPEND Eigen_directory_files_to_install ${f})
11
- endif()
12
- endforeach(f ${Eigen_directory_files})
13
-
14
- install(FILES
15
- ${Eigen_directory_files_to_install}
16
- DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen COMPONENT Devel
17
- )
18
-
19
- install(DIRECTORY src DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen COMPONENT Devel FILES_MATCHING PATTERN "*.h")