tomoto 0.2.2 → 0.3.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +10 -0
- data/README.md +8 -10
- data/ext/tomoto/ct.cpp +11 -11
- data/ext/tomoto/dmr.cpp +14 -13
- data/ext/tomoto/dt.cpp +14 -14
- data/ext/tomoto/extconf.rb +7 -5
- data/ext/tomoto/gdmr.cpp +7 -7
- data/ext/tomoto/hdp.cpp +9 -9
- data/ext/tomoto/hlda.cpp +13 -13
- data/ext/tomoto/hpa.cpp +5 -5
- data/ext/tomoto/lda.cpp +42 -39
- data/ext/tomoto/llda.cpp +6 -6
- data/ext/tomoto/mglda.cpp +15 -15
- data/ext/tomoto/pa.cpp +6 -6
- data/ext/tomoto/plda.cpp +6 -6
- data/ext/tomoto/slda.cpp +8 -8
- data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
- data/ext/tomoto/utils.h +16 -70
- data/lib/tomoto/version.rb +1 -1
- data/lib/tomoto.rb +5 -1
- data/vendor/EigenRand/EigenRand/Core.h +10 -10
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
- data/vendor/EigenRand/EigenRand/EigenRand +11 -6
- data/vendor/EigenRand/EigenRand/Macro.h +13 -7
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
- data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
- data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
- data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
- data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
- data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
- data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
- data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
- data/vendor/EigenRand/EigenRand/doc.h +24 -12
- data/vendor/EigenRand/README.md +57 -4
- data/vendor/eigen/COPYING.APACHE +203 -0
- data/vendor/eigen/COPYING.BSD +1 -1
- data/vendor/eigen/COPYING.MINPACK +51 -52
- data/vendor/eigen/Eigen/Cholesky +0 -1
- data/vendor/eigen/Eigen/Core +112 -265
- data/vendor/eigen/Eigen/Eigenvalues +2 -3
- data/vendor/eigen/Eigen/Geometry +5 -8
- data/vendor/eigen/Eigen/Householder +0 -1
- data/vendor/eigen/Eigen/Jacobi +0 -1
- data/vendor/eigen/Eigen/KLUSupport +41 -0
- data/vendor/eigen/Eigen/LU +2 -5
- data/vendor/eigen/Eigen/OrderingMethods +0 -3
- data/vendor/eigen/Eigen/PaStiXSupport +1 -0
- data/vendor/eigen/Eigen/PardisoSupport +0 -0
- data/vendor/eigen/Eigen/QR +2 -3
- data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
- data/vendor/eigen/Eigen/SVD +0 -1
- data/vendor/eigen/Eigen/Sparse +0 -2
- data/vendor/eigen/Eigen/SparseCholesky +0 -8
- data/vendor/eigen/Eigen/SparseLU +4 -0
- data/vendor/eigen/Eigen/SparseQR +0 -1
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
- data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
- data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
- data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
- data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
- data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
- data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
- data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
- data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
- data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
- data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
- data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
- data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
- data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
- data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
- data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
- data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
- data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
- data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
- data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
- data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
- data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
- data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
- data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
- data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
- data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
- data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
- data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
- data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
- data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
- data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
- data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
- data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
- data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
- data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
- data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
- data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
- data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
- data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
- data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
- data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
- data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
- data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
- data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
- data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
- data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
- data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
- data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
- data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
- data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
- data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
- data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
- data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
- data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
- data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
- data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
- data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
- data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
- data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
- data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
- data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
- data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
- data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
- data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
- data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
- data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
- data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
- data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
- data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
- data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
- data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
- data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
- data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
- data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
- data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
- data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
- data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
- data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
- data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
- data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
- data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
- data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
- data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
- data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
- data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
- data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
- data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
- data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
- data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
- data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
- data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
- data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
- data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
- data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
- data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
- data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
- data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
- data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
- data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
- data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
- data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
- data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
- data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
- data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
- data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
- data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
- data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
- data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/eigen/README.md +2 -0
- data/vendor/eigen/bench/btl/README +1 -1
- data/vendor/eigen/bench/tensors/README +6 -7
- data/vendor/eigen/ci/README.md +56 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
- data/vendor/eigen/unsupported/README.txt +1 -1
- data/vendor/tomotopy/README.kr.rst +78 -0
- data/vendor/tomotopy/README.rst +75 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
- data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
- data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
- data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
- data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
- data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
- data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
- data/vendor/tomotopy/src/Utils/exception.h +6 -0
- data/vendor/tomotopy/src/Utils/math.h +2 -2
- data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
- data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
- data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
- metadata +64 -18
- data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
- data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
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UniformRealGen(_Scalar _min = 0, _Scalar _max = 1)
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{
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RUtils{}.uniform_real(std::forward<Rng>(rng)), pset1<Packet>(slope)
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using
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using Balanced2Type = CwiseNullaryOp<internal::scalar_rng_adaptor<Balanced2Gen<typename Derived::Scalar>, typename Derived::Scalar, Urng, true>, const Derived>;
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/**
|
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|
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|
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|
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|
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|
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*
|
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|
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template<typename Derived, typename Urng>
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|
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balanced(Index rows, Index cols, Urng&& urng, typename Derived::Scalar a, typename Derived::Scalar b)
|
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{
|
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return {
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rows, cols, { std::forward<Urng>(urng), Balanced2Gen<typename Derived::Scalar>{a, b} }
|
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};
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}
|
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/**
|
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* @brief generates reals in a range `[a, b]`
|
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*
|
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* @tparam Derived
|
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* @tparam Urng
|
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* @param o an instance of any type of Eigen::DenseBase
|
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* @param urng c++11-style random number generator
|
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|
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* @return a random matrix expression of the same shape as `o`
|
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*
|
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* @see Eigen::Rand::BalancedGen
|
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*/
|
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template<typename Derived, typename Urng>
|
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|
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inline const Balanced2Type<Derived, Urng>
|
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balancedLike(const Derived& o, Urng&& urng, typename Derived::Scalar a, typename Derived::Scalar b)
|
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{
|
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return {
|
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o.rows(), o.cols(), { std::forward<Urng>(urng), Balanced2Gen<typename Derived::Scalar>{a, b} }
|
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};
|
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}
|
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|
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template<typename Derived, typename Urng>
|
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using StdUniformRealType = CwiseNullaryOp<internal::scalar_rng_adaptor<StdUniformRealGen<typename Derived::Scalar>, typename Derived::Scalar, Urng, true>, const Derived>;
|
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/**
|
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|
@@ -483,7 +636,7 @@ namespace Eigen
|
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|
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|
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template<typename Derived, typename Urng>
|
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|
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inline const
|
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inline const StdUniformRealType<Derived, Urng>
|
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640
|
uniformReal(Index rows, Index cols, Urng&& urng)
|
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{
|
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return {
|
@@ -503,7 +656,7 @@ namespace Eigen
|
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* @see Eigen::Rand::UniformRealGen
|
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*/
|
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template<typename Derived, typename Urng>
|
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|
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inline const
|
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inline const StdUniformRealType<Derived, Urng>
|
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660
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uniformRealLike(Derived& o, Urng&& urng)
|
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{
|
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662
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return {
|
@@ -511,6 +664,52 @@ namespace Eigen
|
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};
|
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665
|
}
|
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666
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template<typename Derived, typename Urng>
|
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|
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using UniformRealType = CwiseNullaryOp<internal::scalar_rng_adaptor<UniformRealGen<typename Derived::Scalar>, typename Derived::Scalar, Urng, true>, const Derived>;
|
669
|
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|
670
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/**
|
671
|
+
* @brief generates reals in a range `[min, max)`
|
672
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*
|
673
|
+
* @tparam Derived a type of Eigen::DenseBase
|
674
|
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* @tparam Urng
|
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* @param rows the number of rows being generated
|
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* @param cols the number of columns being generated
|
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* @param urng c++11-style random number generator
|
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* @param min, max the range of reals being generated
|
679
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* @return a random matrix expression with a shape (`rows`, `cols`)
|
680
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*
|
681
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* @see Eigen::Rand::UniformRealGen
|
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*/
|
683
|
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template<typename Derived, typename Urng>
|
684
|
+
inline const UniformRealType<Derived, Urng>
|
685
|
+
uniformReal(Index rows, Index cols, Urng&& urng, typename Derived::Scalar min, typename Derived::Scalar max)
|
686
|
+
{
|
687
|
+
return {
|
688
|
+
rows, cols, { std::forward<Urng>(urng), UniformRealGen<typename Derived::Scalar>{ min, max } }
|
689
|
+
};
|
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|
+
}
|
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|
+
|
692
|
+
/**
|
693
|
+
* @brief generates reals in a range `[min, max)`
|
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|
+
*
|
695
|
+
* @tparam Derived
|
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|
+
* @tparam Urng
|
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|
+
* @param o an instance of any type of Eigen::DenseBase
|
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|
+
* @param urng c++11-style random number generator
|
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|
+
* @param min, max the range of reals being generated
|
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+
* @return a random matrix expression of the same shape as `o`
|
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+
*
|
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|
+
* @see Eigen::Rand::UniformRealGen
|
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|
+
*/
|
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|
+
template<typename Derived, typename Urng>
|
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|
+
inline const UniformRealType<Derived, Urng>
|
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|
+
uniformRealLike(Derived& o, Urng&& urng, typename Derived::Scalar min, typename Derived::Scalar max)
|
707
|
+
{
|
708
|
+
return {
|
709
|
+
o.rows(), o.cols(), { std::forward<Urng>(urng), UniformRealGen<typename Derived::Scalar>{ min, max } }
|
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|
+
};
|
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|
+
}
|
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|
+
|
514
713
|
template<typename Derived, typename Urng>
|
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714
|
using BernoulliType = CwiseNullaryOp<internal::scalar_rng_adaptor<BernoulliGen<typename Derived::Scalar>, typename Derived::Scalar, Urng, true>, const Derived>;
|
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|
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@@ -2,10 +2,10 @@
|
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2
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* @file Discrete.h
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* @author bab2min (bab2min@gmail.com)
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* @brief
|
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* @version 0.3.
|
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-
* @date
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* @version 0.3.3
|
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* @date 2021-03-31
|
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*
|
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|
-
* @copyright Copyright (c) 2020
|
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+
* @copyright Copyright (c) 2020-2021
|
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*
|
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*/
|
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@@ -49,11 +49,11 @@ namespace Eigen
|
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bitmask = o.bitmask;
|
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if (msize)
|
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{
|
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-
arr = std::unique_ptr<_Precision[]>(new _Precision[1 << bitsize]);
|
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-
alias = std::unique_ptr<_Size[]>(new _Size[1 << bitsize]);
|
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|
+
arr = std::unique_ptr<_Precision[]>(new _Precision[(size_t)1 << bitsize]);
|
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+
alias = std::unique_ptr<_Size[]>(new _Size[(size_t)1 << bitsize]);
|
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54
|
|
55
|
-
std::copy(o.arr.get(), o.arr.get() + (1 << bitsize), arr.get());
|
56
|
-
std::copy(o.alias.get(), o.alias.get() + (1 << bitsize), alias.get());
|
55
|
+
std::copy(o.arr.get(), o.arr.get() + ((size_t)1 << bitsize), arr.get());
|
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|
+
std::copy(o.alias.get(), o.alias.get() + ((size_t)1 << bitsize), alias.get());
|
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|
}
|
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return *this;
|
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|
}
|
@@ -125,7 +125,7 @@ namespace Eigen
|
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{
|
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arr[under] = (_Precision)f[under];
|
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}
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-
alias[under] = over;
|
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+
alias[under] = (_Size)over;
|
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|
f[over] += f[under] - 1;
|
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|
if (f[over] >= 1 || mm <= over)
|
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|
{
|
@@ -152,7 +152,7 @@ namespace Eigen
|
|
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|
{
|
153
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|
arr[over] = 1;
|
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|
}
|
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|
-
alias[over] = over;
|
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|
+
alias[over] = (_Size)over;
|
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156
|
}
|
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|
}
|
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|
|
@@ -166,7 +166,7 @@ namespace Eigen
|
|
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|
{
|
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|
arr[under] = 1;
|
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|
}
|
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|
-
alias[under] = under;
|
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|
+
alias[under] = (_Size)under;
|
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|
for (under = mm; under < msize; ++under)
|
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|
{
|
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|
if (f[under] < 1)
|
@@ -179,7 +179,7 @@ namespace Eigen
|
|
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|
{
|
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|
arr[under] = 1;
|
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181
|
}
|
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|
-
alias[under] = under;
|
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|
+
alias[under] = (_Size)under;
|
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183
|
}
|
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184
|
}
|
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185
|
}
|
@@ -260,8 +260,9 @@ namespace Eigen
|
|
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|
else
|
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|
{
|
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|
size_t bitcnt = bitsize;
|
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|
-
|
263
|
+
for (int _i = 0; ; ++_i)
|
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|
{
|
265
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
265
266
|
_Scalar cands = (_Scalar)(rx & bitmask);
|
266
267
|
if (cands <= pdiff) return cands;
|
267
268
|
if (bitcnt + bitsize < 32)
|
@@ -293,8 +294,9 @@ namespace Eigen
|
|
293
294
|
auto& cm = Rand::detail::CompressMask<sizeof(Packet)>::get_inst();
|
294
295
|
auto plen = pset1<Packet>(pdiff + 1);
|
295
296
|
size_t bitcnt = bitsize;
|
296
|
-
|
297
|
+
for (int _i = 0; ; ++_i)
|
297
298
|
{
|
299
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
298
300
|
// accept cands that only < plen
|
299
301
|
auto cands = pand(rx, pbitmask);
|
300
302
|
bool full = false;
|
@@ -304,7 +306,7 @@ namespace Eigen
|
|
304
306
|
|
305
307
|
if (bitcnt + bitsize < 32)
|
306
308
|
{
|
307
|
-
rx = psrl(rx, bitsize);
|
309
|
+
rx = psrl<-1>(rx, bitsize);
|
308
310
|
bitcnt += bitsize;
|
309
311
|
}
|
310
312
|
else
|
@@ -417,7 +419,7 @@ namespace Eigen
|
|
417
419
|
auto rx = randbits(std::forward<Rng>(rng));
|
418
420
|
auto albit = rx & alias_table.get_bitmask();
|
419
421
|
uint32_t alx = (uint32_t)(rx >> (sizeof(rx) * 8 - 31));
|
420
|
-
if (alx < alias_table.get_prob()[albit]) return albit;
|
422
|
+
if (alx < alias_table.get_prob()[albit]) return (_Scalar)albit;
|
421
423
|
return alias_table.get_alias()[albit];
|
422
424
|
}
|
423
425
|
}
|
@@ -451,7 +453,7 @@ namespace Eigen
|
|
451
453
|
{
|
452
454
|
auto rx = randbits.template packetOp<PacketType>(std::forward<Rng>(rng));
|
453
455
|
auto albit = pand(rx, pset1<PacketType>(alias_table.get_bitmask()));
|
454
|
-
auto c = pcmplt(psrl(rx
|
456
|
+
auto c = pcmplt(psrl<1>(rx), pgather(alias_table.get_prob(), albit));
|
455
457
|
ret = pblendv(c, albit, pgather(alias_table.get_alias(), albit));
|
456
458
|
}
|
457
459
|
|
@@ -673,6 +675,8 @@ namespace Eigen
|
|
673
675
|
}
|
674
676
|
}
|
675
677
|
|
678
|
+
#ifdef EIGEN_VECTORIZE_NEON
|
679
|
+
#else
|
676
680
|
template<typename Packet, typename Rng>
|
677
681
|
EIGEN_STRONG_INLINE const Packet packetOp(Rng&& rng)
|
678
682
|
{
|
@@ -681,7 +685,7 @@ namespace Eigen
|
|
681
685
|
if (!cdf.empty())
|
682
686
|
{
|
683
687
|
auto ret = pset1<Packet>(cdf.size());
|
684
|
-
#ifdef EIGEN_VECTORIZE_AVX
|
688
|
+
#ifdef EIGEN_VECTORIZE_AVX
|
685
689
|
auto rx = ur.template packetOp<Packet4d>(std::forward<Rng>(rng));
|
686
690
|
for (auto& p : cdf)
|
687
691
|
{
|
@@ -689,7 +693,7 @@ namespace Eigen
|
|
689
693
|
auto r = combine_low32(c);
|
690
694
|
ret = padd(ret, r);
|
691
695
|
}
|
692
|
-
#else
|
696
|
+
#else
|
693
697
|
auto rx1 = ur.template packetOp<DPacket>(rng),
|
694
698
|
rx2 = ur.template packetOp<DPacket>(rng);
|
695
699
|
for (auto& p : cdf)
|
@@ -697,25 +701,26 @@ namespace Eigen
|
|
697
701
|
auto pp = pset1<decltype(rx1)>(p);
|
698
702
|
ret = padd(ret, combine_low32(reinterpret_to_int(pcmplt(rx1, pp)), reinterpret_to_int(pcmplt(rx2, pp))));
|
699
703
|
}
|
700
|
-
#endif
|
704
|
+
#endif
|
701
705
|
return ret;
|
702
706
|
}
|
703
707
|
else
|
704
708
|
{
|
705
|
-
#ifdef EIGEN_VECTORIZE_AVX
|
709
|
+
#ifdef EIGEN_VECTORIZE_AVX
|
706
710
|
using RUtils = RawbitsMaker<Packet, Rng>;
|
707
711
|
auto albit = pand(RUtils{}.rawbits(rng), pset1<Packet>(alias_table.get_bitmask()));
|
708
712
|
auto c = reinterpret_to_int(pcmplt(ur.template packetOp<Packet4d>(rng), pgather(alias_table.get_prob(), _mm256_castsi128_si256(albit))));
|
709
713
|
return pblendv(combine_low32(c), albit, pgather(alias_table.get_alias(), albit));
|
710
|
-
#else
|
714
|
+
#else
|
711
715
|
using RUtils = RawbitsMaker<Packet, Rng>;
|
712
716
|
auto albit = pand(RUtils{}.rawbits(rng), pset1<Packet>(alias_table.get_bitmask()));
|
713
717
|
auto c1 = reinterpret_to_int(pcmplt(ur.template packetOp<DPacket>(rng), pgather(alias_table.get_prob(), albit)));
|
714
718
|
auto c2 = reinterpret_to_int(pcmplt(ur.template packetOp<DPacket>(rng), pgather(alias_table.get_prob(), albit, true)));
|
715
719
|
return pblendv(combine_low32(c1, c2), albit, pgather(alias_table.get_alias(), albit));
|
716
|
-
#endif
|
720
|
+
#endif
|
717
721
|
}
|
718
722
|
}
|
723
|
+
#endif
|
719
724
|
};
|
720
725
|
|
721
726
|
template<typename> class BinomialGen;
|
@@ -777,8 +782,9 @@ namespace Eigen
|
|
777
782
|
{
|
778
783
|
_Scalar res;
|
779
784
|
double yx;
|
780
|
-
|
785
|
+
for (int _i = 0; ; ++_i)
|
781
786
|
{
|
787
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
782
788
|
yx = std::tan(constant::pi * ur(rng));
|
783
789
|
res = (_Scalar)(sqrt_tmean * yx + mean);
|
784
790
|
if (res >= 0 && ur(rng) <= 0.9 * (1.0 + yx * yx)
|
@@ -800,8 +806,9 @@ namespace Eigen
|
|
800
806
|
{
|
801
807
|
Packet res = pset1<Packet>(0);
|
802
808
|
PacketType val = pset1<PacketType>(1), pne_mean = pset1<PacketType>(ne_mean);
|
803
|
-
|
809
|
+
for (int _i = 0; ; ++_i)
|
804
810
|
{
|
811
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
805
812
|
val = pmul(val, ur.template packetOp<PacketType>(rng));
|
806
813
|
auto c = reinterpret_to_int(pcmplt(pne_mean, val));
|
807
814
|
if (pmovemask(c) == 0) break;
|
@@ -817,15 +824,16 @@ namespace Eigen
|
|
817
824
|
pmean = pset1<PacketType>(mean),
|
818
825
|
plog_mean = pset1<PacketType>(log_mean),
|
819
826
|
pg1 = pset1<PacketType>(g1);
|
820
|
-
|
827
|
+
for (int _i = 0; ; ++_i)
|
821
828
|
{
|
829
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
822
830
|
PacketType fres, yx, psin, pcos;
|
823
831
|
psincos(pmul(ppi, ur.template packetOp<PacketType>(rng)), psin, pcos);
|
824
832
|
yx = pdiv(psin, pcos);
|
825
833
|
fres = ptruncate(padd(pmul(psqrt_tmean, yx), pmean));
|
826
834
|
|
827
835
|
auto p1 = pmul(padd(pmul(yx, yx), pset1<PacketType>(1)), pset1<PacketType>(0.9));
|
828
|
-
auto p2 = pexp(psub(psub(pmul(fres, plog_mean),
|
836
|
+
auto p2 = pexp(psub(psub(pmul(fres, plog_mean), plgamma_approx(padd(fres, pset1<PacketType>(1)))), pg1));
|
829
837
|
|
830
838
|
auto c1 = pcmple(pset1<PacketType>(0), fres);
|
831
839
|
auto c2 = pcmple(ur.template packetOp<PacketType>(rng), pmul(p1, p2));
|
@@ -852,7 +860,7 @@ namespace Eigen
|
|
852
860
|
|
853
861
|
PoissonGen<_Scalar> poisson;
|
854
862
|
_Scalar trials;
|
855
|
-
double p, small_p, g1, sqrt_v, log_small_p, log_small_q;
|
863
|
+
double p = 0, small_p = 0, g1 = 0, sqrt_v = 0, log_small_p = 0, log_small_q = 0;
|
856
864
|
|
857
865
|
public:
|
858
866
|
using Scalar = _Scalar;
|
@@ -903,8 +911,9 @@ namespace Eigen
|
|
903
911
|
}
|
904
912
|
else
|
905
913
|
{
|
906
|
-
|
914
|
+
for (int _i = 0; ; ++_i)
|
907
915
|
{
|
916
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
908
917
|
double ys;
|
909
918
|
ys = std::tan(constant::pi * poisson.ur(rng));
|
910
919
|
res = (_Scalar)(sqrt_v * ys + poisson.mean);
|
@@ -954,8 +963,9 @@ namespace Eigen
|
|
954
963
|
plog_small_p = pset1<PacketType>(log_small_p),
|
955
964
|
plog_small_q = pset1<PacketType>(log_small_q),
|
956
965
|
pg1 = pset1<PacketType>(g1);
|
957
|
-
|
966
|
+
for (int _i = 0; ; ++_i)
|
958
967
|
{
|
968
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
959
969
|
PacketType fres, ys, psin, pcos;
|
960
970
|
psincos(pmul(ppi, poisson.ur.template packetOp<PacketType>(rng)), psin, pcos);
|
961
971
|
ys = pdiv(psin, pcos);
|
@@ -964,8 +974,8 @@ namespace Eigen
|
|
964
974
|
auto p1 = pmul(pmul(pset1<PacketType>(1.2), psqrt_v), padd(pset1<PacketType>(1), pmul(ys, ys)));
|
965
975
|
auto p2 = pexp(
|
966
976
|
padd(padd(psub(
|
967
|
-
psub(pg1,
|
968
|
-
|
977
|
+
psub(pg1, plgamma_approx(padd(fres, pset1<PacketType>(1)))),
|
978
|
+
plgamma_approx(psub(padd(ptrials, pset1<PacketType>(1)), fres))
|
969
979
|
), pmul(fres, plog_small_p)), pmul(psub(ptrials, fres), plog_small_q))
|
970
980
|
);
|
971
981
|
|
@@ -1503,6 +1513,17 @@ namespace Eigen
|
|
1503
1513
|
};
|
1504
1514
|
}
|
1505
1515
|
}
|
1516
|
+
|
1517
|
+
#ifdef EIGEN_VECTORIZE_NEON
|
1518
|
+
namespace internal
|
1519
|
+
{
|
1520
|
+
template<typename _Scalar, typename Urng, bool _mutable>
|
1521
|
+
struct functor_traits<scalar_rng_adaptor<Rand::DiscreteGen<_Scalar, double>, _Scalar, Urng, _mutable> >
|
1522
|
+
{
|
1523
|
+
enum { Cost = HugeCost, PacketAccess = 0, IsRepeatable = false };
|
1524
|
+
};
|
1525
|
+
}
|
1526
|
+
#endif
|
1506
1527
|
}
|
1507
1528
|
|
1508
1529
|
#endif
|
@@ -2,10 +2,10 @@
|
|
2
2
|
* @file GammaPoisson.h
|
3
3
|
* @author bab2min (bab2min@gmail.com)
|
4
4
|
* @brief
|
5
|
-
* @version 0.3.
|
6
|
-
* @date
|
5
|
+
* @version 0.3.3
|
6
|
+
* @date 2021-03-31
|
7
7
|
*
|
8
|
-
* @copyright Copyright (c) 2020
|
8
|
+
* @copyright Copyright (c) 2020-2021
|
9
9
|
*
|
10
10
|
*/
|
11
11
|
|
@@ -58,7 +58,6 @@ namespace Eigen
|
|
58
58
|
EIGEN_STRONG_INLINE const Packet packetOp(Rng&& rng)
|
59
59
|
{
|
60
60
|
using namespace Eigen::internal;
|
61
|
-
using ur_base = UniformRealGen<float>;
|
62
61
|
using PacketType = decltype(reinterpret_to_float(std::declval<Packet>()));
|
63
62
|
|
64
63
|
auto mean = gamma.template packetOp<PacketType>(rng);
|
@@ -66,8 +65,9 @@ namespace Eigen
|
|
66
65
|
PacketType val = pset1<PacketType>(1), pne_mean = pexp(pnegate(mean));
|
67
66
|
if (pmovemask(pcmplt(pset1<PacketType>(12), mean)) == 0)
|
68
67
|
{
|
69
|
-
|
68
|
+
for (int _i = 0; ; ++_i)
|
70
69
|
{
|
70
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
71
71
|
val = pmul(val, ur.template packetOp<PacketType>(rng));
|
72
72
|
auto c = reinterpret_to_int(pcmplt(pne_mean, val));
|
73
73
|
if (pmovemask(c) == 0) break;
|
@@ -81,16 +81,17 @@ namespace Eigen
|
|
81
81
|
const PacketType ppi = pset1<PacketType>(constant::pi),
|
82
82
|
psqrt_tmean = psqrt(pmul(pset1<PacketType>(2), mean)),
|
83
83
|
plog_mean = plog(mean),
|
84
|
-
pg1 = psub(pmul(mean, plog_mean),
|
85
|
-
|
84
|
+
pg1 = psub(pmul(mean, plog_mean), plgamma_approx(padd(mean, pset1<PacketType>(1))));
|
85
|
+
for (int _i = 0; ; ++_i)
|
86
86
|
{
|
87
|
+
EIGENRAND_CHECK_INFINITY_LOOP();
|
87
88
|
PacketType fres, yx, psin, pcos;
|
88
89
|
psincos(pmul(ppi, ur.template packetOp<PacketType>(rng)), psin, pcos);
|
89
90
|
yx = pdiv(psin, pcos);
|
90
91
|
fres = ptruncate(padd(pmul(psqrt_tmean, yx), mean));
|
91
92
|
|
92
93
|
auto p1 = pmul(padd(pmul(yx, yx), pset1<PacketType>(1)), pset1<PacketType>(0.9));
|
93
|
-
auto p2 = pexp(psub(psub(pmul(fres, plog_mean),
|
94
|
+
auto p2 = pexp(psub(psub(pmul(fres, plog_mean), plgamma_approx(padd(fres, pset1<PacketType>(1)))), pg1));
|
94
95
|
|
95
96
|
auto c1 = pcmple(pset1<PacketType>(0), fres);
|
96
97
|
auto c2 = pcmple(ur.template packetOp<PacketType>(rng), pmul(p1, p2));
|