tomoto 0.2.2 → 0.3.0

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Files changed (369) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +10 -0
  3. data/README.md +8 -10
  4. data/ext/tomoto/ct.cpp +11 -11
  5. data/ext/tomoto/dmr.cpp +14 -13
  6. data/ext/tomoto/dt.cpp +14 -14
  7. data/ext/tomoto/extconf.rb +7 -5
  8. data/ext/tomoto/gdmr.cpp +7 -7
  9. data/ext/tomoto/hdp.cpp +9 -9
  10. data/ext/tomoto/hlda.cpp +13 -13
  11. data/ext/tomoto/hpa.cpp +5 -5
  12. data/ext/tomoto/lda.cpp +42 -39
  13. data/ext/tomoto/llda.cpp +6 -6
  14. data/ext/tomoto/mglda.cpp +15 -15
  15. data/ext/tomoto/pa.cpp +6 -6
  16. data/ext/tomoto/plda.cpp +6 -6
  17. data/ext/tomoto/slda.cpp +8 -8
  18. data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
  19. data/ext/tomoto/utils.h +16 -70
  20. data/lib/tomoto/version.rb +1 -1
  21. data/lib/tomoto.rb +5 -1
  22. data/vendor/EigenRand/EigenRand/Core.h +10 -10
  23. data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
  24. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
  25. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
  26. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
  27. data/vendor/EigenRand/EigenRand/EigenRand +11 -6
  28. data/vendor/EigenRand/EigenRand/Macro.h +13 -7
  29. data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
  30. data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
  31. data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
  32. data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
  33. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
  34. data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
  35. data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
  36. data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
  37. data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
  38. data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
  39. data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
  40. data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
  41. data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
  42. data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
  43. data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
  44. data/vendor/EigenRand/EigenRand/doc.h +24 -12
  45. data/vendor/EigenRand/README.md +57 -4
  46. data/vendor/eigen/COPYING.APACHE +203 -0
  47. data/vendor/eigen/COPYING.BSD +1 -1
  48. data/vendor/eigen/COPYING.MINPACK +51 -52
  49. data/vendor/eigen/Eigen/Cholesky +0 -1
  50. data/vendor/eigen/Eigen/Core +112 -265
  51. data/vendor/eigen/Eigen/Eigenvalues +2 -3
  52. data/vendor/eigen/Eigen/Geometry +5 -8
  53. data/vendor/eigen/Eigen/Householder +0 -1
  54. data/vendor/eigen/Eigen/Jacobi +0 -1
  55. data/vendor/eigen/Eigen/KLUSupport +41 -0
  56. data/vendor/eigen/Eigen/LU +2 -5
  57. data/vendor/eigen/Eigen/OrderingMethods +0 -3
  58. data/vendor/eigen/Eigen/PaStiXSupport +1 -0
  59. data/vendor/eigen/Eigen/PardisoSupport +0 -0
  60. data/vendor/eigen/Eigen/QR +2 -3
  61. data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
  62. data/vendor/eigen/Eigen/SVD +0 -1
  63. data/vendor/eigen/Eigen/Sparse +0 -2
  64. data/vendor/eigen/Eigen/SparseCholesky +0 -8
  65. data/vendor/eigen/Eigen/SparseLU +4 -0
  66. data/vendor/eigen/Eigen/SparseQR +0 -1
  67. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
  68. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
  69. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
  70. data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
  71. data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
  72. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
  73. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
  74. data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
  75. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
  76. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
  77. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
  78. data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
  79. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
  80. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
  81. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
  82. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
  84. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
  85. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
  86. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
  87. data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
  88. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
  89. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
  90. data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
  91. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
  92. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
  93. data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
  94. data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
  95. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
  96. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
  97. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
  98. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
  99. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
  100. data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
  101. data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
  102. data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
  103. data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
  104. data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
  105. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
  106. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
  107. data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
  108. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
  109. data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
  110. data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
  111. data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
  112. data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  113. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
  114. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
  115. data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
  116. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
  117. data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
  118. data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
  119. data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
  120. data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
  121. data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
  122. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
  123. data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
  124. data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
  125. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
  126. data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
  127. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
  128. data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
  129. data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
  130. data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
  131. data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
  132. data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
  133. data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
  134. data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
  135. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
  136. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
  137. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
  138. data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
  139. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
  140. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
  141. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
  142. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
  143. data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
  145. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
  146. data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
  148. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
  149. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
  153. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
  154. data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
  156. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
  160. data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  161. data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
  162. data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  163. data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  164. data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  165. data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  166. data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  167. data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  168. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
  169. data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  170. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
  171. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
  172. data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  173. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
  174. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
  175. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
  176. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
  177. data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  178. data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  179. data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  180. data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  181. data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  182. data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  183. data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  184. data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  185. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
  186. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
  187. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
  188. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
  189. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
  190. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
  191. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
  192. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
  193. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
  194. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
  195. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
  196. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
  197. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
  198. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
  199. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
  200. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
  201. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
  202. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
  203. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
  204. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
  205. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
  206. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
  207. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
  208. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
  209. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
  210. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
  211. data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  212. data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
  213. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
  214. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
  215. data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  216. data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
  217. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
  218. data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
  219. data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
  220. data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
  221. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
  222. data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  223. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
  224. data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  225. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
  226. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
  227. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
  228. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
  229. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
  230. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
  231. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
  232. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
  233. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
  234. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
  235. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
  236. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
  237. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
  238. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
  239. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
  240. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
  241. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
  242. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
  243. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
  244. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
  245. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
  246. data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
  247. data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
  248. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
  249. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  250. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
  251. data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
  252. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
  253. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
  254. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
  255. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
  256. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
  257. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
  258. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
  259. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
  260. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
  261. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
  262. data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  263. data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
  264. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
  265. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
  266. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
  267. data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
  268. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
  269. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
  270. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
  271. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
  272. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
  273. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
  274. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
  275. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
  276. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
  277. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
  278. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
  279. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
  280. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
  281. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
  282. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
  283. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
  284. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
  285. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
  295. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
  296. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
  297. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
  298. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
  299. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
  300. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
  303. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
  304. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
  306. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
  307. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
  308. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
  309. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
  310. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
  311. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
  312. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
  313. data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
  314. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
  315. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
  316. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
  317. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
  318. data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  319. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
  320. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
  321. data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
  322. data/vendor/eigen/README.md +2 -0
  323. data/vendor/eigen/bench/btl/README +1 -1
  324. data/vendor/eigen/bench/tensors/README +6 -7
  325. data/vendor/eigen/ci/README.md +56 -0
  326. data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
  327. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
  328. data/vendor/eigen/unsupported/README.txt +1 -1
  329. data/vendor/tomotopy/README.kr.rst +78 -0
  330. data/vendor/tomotopy/README.rst +75 -0
  331. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
  332. data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
  333. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
  334. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
  335. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
  336. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
  337. data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
  338. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
  339. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
  340. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
  341. data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
  342. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
  343. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
  344. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
  345. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
  346. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
  347. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
  348. data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
  349. data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
  350. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
  351. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
  352. data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
  353. data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
  354. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
  355. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
  356. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
  357. data/vendor/tomotopy/src/Utils/exception.h +6 -0
  358. data/vendor/tomotopy/src/Utils/math.h +2 -2
  359. data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
  360. data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
  361. data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
  362. metadata +64 -18
  363. data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
  364. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
  365. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
  366. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
  367. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
  368. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
  369. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -144,7 +144,7 @@ template<typename Scalar> struct swap_assign_op {
144
144
  EIGEN_EMPTY_STRUCT_CTOR(swap_assign_op)
145
145
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(Scalar& a, const Scalar& b) const
146
146
  {
147
- #ifdef __CUDACC__
147
+ #ifdef EIGEN_GPUCC
148
148
  // FIXME is there some kind of cuda::swap?
149
149
  Scalar t=b; const_cast<Scalar&>(b)=a; a=t;
150
150
  #else
@@ -157,7 +157,16 @@ template<typename Scalar>
157
157
  struct functor_traits<swap_assign_op<Scalar> > {
158
158
  enum {
159
159
  Cost = 3 * NumTraits<Scalar>::ReadCost,
160
- PacketAccess = packet_traits<Scalar>::Vectorizable
160
+ PacketAccess =
161
+ #if defined(EIGEN_VECTORIZE_AVX) && EIGEN_COMP_CLANG && (EIGEN_COMP_CLANG<800 || defined(__apple_build_version__))
162
+ // This is a partial workaround for a bug in clang generating bad code
163
+ // when mixing 256/512 bits loads and 128 bits moves.
164
+ // See http://eigen.tuxfamily.org/bz/show_bug.cgi?id=1684
165
+ // https://bugs.llvm.org/show_bug.cgi?id=40815
166
+ 0
167
+ #else
168
+ packet_traits<Scalar>::Vectorizable
169
+ #endif
161
170
  };
162
171
  };
163
172
 
@@ -39,32 +39,26 @@ struct scalar_sum_op : binary_op_base<LhsScalar,RhsScalar>
39
39
  EIGEN_SCALAR_BINARY_OP_PLUGIN
40
40
  }
41
41
  #endif
42
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a + b; }
42
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a + b; }
43
43
  template<typename Packet>
44
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
44
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet packetOp(const Packet& a, const Packet& b) const
45
45
  { return internal::padd(a,b); }
46
46
  template<typename Packet>
47
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type predux(const Packet& a) const
47
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type predux(const Packet& a) const
48
48
  { return internal::predux(a); }
49
49
  };
50
50
  template<typename LhsScalar,typename RhsScalar>
51
51
  struct functor_traits<scalar_sum_op<LhsScalar,RhsScalar> > {
52
52
  enum {
53
- Cost = (NumTraits<LhsScalar>::AddCost+NumTraits<RhsScalar>::AddCost)/2, // rough estimate!
53
+ Cost = (int(NumTraits<LhsScalar>::AddCost) + int(NumTraits<RhsScalar>::AddCost)) / 2, // rough estimate!
54
54
  PacketAccess = is_same<LhsScalar,RhsScalar>::value && packet_traits<LhsScalar>::HasAdd && packet_traits<RhsScalar>::HasAdd
55
55
  // TODO vectorize mixed sum
56
56
  };
57
57
  };
58
58
 
59
- /** \internal
60
- * \brief Template specialization to deprecate the summation of boolean expressions.
61
- * This is required to solve Bug 426.
62
- * \sa DenseBase::count(), DenseBase::any(), ArrayBase::cast(), MatrixBase::cast()
63
- */
64
- template<> struct scalar_sum_op<bool,bool> : scalar_sum_op<int,int> {
65
- EIGEN_DEPRECATED
66
- scalar_sum_op() {}
67
- };
59
+
60
+ template<>
61
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool scalar_sum_op<bool,bool>::operator() (const bool& a, const bool& b) const { return a || b; }
68
62
 
69
63
 
70
64
  /** \internal
@@ -83,23 +77,27 @@ struct scalar_product_op : binary_op_base<LhsScalar,RhsScalar>
83
77
  EIGEN_SCALAR_BINARY_OP_PLUGIN
84
78
  }
85
79
  #endif
86
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a * b; }
80
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a * b; }
87
81
  template<typename Packet>
88
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
82
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet packetOp(const Packet& a, const Packet& b) const
89
83
  { return internal::pmul(a,b); }
90
84
  template<typename Packet>
91
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type predux(const Packet& a) const
85
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type predux(const Packet& a) const
92
86
  { return internal::predux_mul(a); }
93
87
  };
94
88
  template<typename LhsScalar,typename RhsScalar>
95
89
  struct functor_traits<scalar_product_op<LhsScalar,RhsScalar> > {
96
90
  enum {
97
- Cost = (NumTraits<LhsScalar>::MulCost + NumTraits<RhsScalar>::MulCost)/2, // rough estimate!
91
+ Cost = (int(NumTraits<LhsScalar>::MulCost) + int(NumTraits<RhsScalar>::MulCost))/2, // rough estimate!
98
92
  PacketAccess = is_same<LhsScalar,RhsScalar>::value && packet_traits<LhsScalar>::HasMul && packet_traits<RhsScalar>::HasMul
99
93
  // TODO vectorize mixed product
100
94
  };
101
95
  };
102
96
 
97
+ template<>
98
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool scalar_product_op<bool,bool>::operator() (const bool& a, const bool& b) const { return a && b; }
99
+
100
+
103
101
  /** \internal
104
102
  * \brief Template functor to compute the conjugate product of two scalars
105
103
  *
@@ -116,11 +114,11 @@ struct scalar_conj_product_op : binary_op_base<LhsScalar,RhsScalar>
116
114
  typedef typename ScalarBinaryOpTraits<LhsScalar,RhsScalar,scalar_conj_product_op>::ReturnType result_type;
117
115
 
118
116
  EIGEN_EMPTY_STRUCT_CTOR(scalar_conj_product_op)
119
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const
117
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const LhsScalar& a, const RhsScalar& b) const
120
118
  { return conj_helper<LhsScalar,RhsScalar,Conj,false>().pmul(a,b); }
121
119
 
122
120
  template<typename Packet>
123
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
121
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet packetOp(const Packet& a, const Packet& b) const
124
122
  { return conj_helper<Packet,Packet,Conj,false>().pmul(a,b); }
125
123
  };
126
124
  template<typename LhsScalar,typename RhsScalar>
@@ -136,21 +134,28 @@ struct functor_traits<scalar_conj_product_op<LhsScalar,RhsScalar> > {
136
134
  *
137
135
  * \sa class CwiseBinaryOp, MatrixBase::cwiseMin, class VectorwiseOp, MatrixBase::minCoeff()
138
136
  */
139
- template<typename LhsScalar,typename RhsScalar>
137
+ template<typename LhsScalar,typename RhsScalar, int NaNPropagation>
140
138
  struct scalar_min_op : binary_op_base<LhsScalar,RhsScalar>
141
139
  {
142
140
  typedef typename ScalarBinaryOpTraits<LhsScalar,RhsScalar,scalar_min_op>::ReturnType result_type;
143
141
  EIGEN_EMPTY_STRUCT_CTOR(scalar_min_op)
144
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return numext::mini(a, b); }
142
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const LhsScalar& a, const RhsScalar& b) const {
143
+ return internal::pmin<NaNPropagation>(a, b);
144
+ }
145
145
  template<typename Packet>
146
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
147
- { return internal::pmin(a,b); }
146
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet packetOp(const Packet& a, const Packet& b) const
147
+ {
148
+ return internal::pmin<NaNPropagation>(a,b);
149
+ }
148
150
  template<typename Packet>
149
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type predux(const Packet& a) const
150
- { return internal::predux_min(a); }
151
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type predux(const Packet& a) const
152
+ {
153
+ return internal::predux_min<NaNPropagation>(a);
154
+ }
151
155
  };
152
- template<typename LhsScalar,typename RhsScalar>
153
- struct functor_traits<scalar_min_op<LhsScalar,RhsScalar> > {
156
+
157
+ template<typename LhsScalar,typename RhsScalar, int NaNPropagation>
158
+ struct functor_traits<scalar_min_op<LhsScalar,RhsScalar, NaNPropagation> > {
154
159
  enum {
155
160
  Cost = (NumTraits<LhsScalar>::AddCost+NumTraits<RhsScalar>::AddCost)/2,
156
161
  PacketAccess = internal::is_same<LhsScalar, RhsScalar>::value && packet_traits<LhsScalar>::HasMin
@@ -162,21 +167,28 @@ struct functor_traits<scalar_min_op<LhsScalar,RhsScalar> > {
162
167
  *
163
168
  * \sa class CwiseBinaryOp, MatrixBase::cwiseMax, class VectorwiseOp, MatrixBase::maxCoeff()
164
169
  */
165
- template<typename LhsScalar,typename RhsScalar>
166
- struct scalar_max_op : binary_op_base<LhsScalar,RhsScalar>
170
+ template<typename LhsScalar,typename RhsScalar, int NaNPropagation>
171
+ struct scalar_max_op : binary_op_base<LhsScalar,RhsScalar>
167
172
  {
168
173
  typedef typename ScalarBinaryOpTraits<LhsScalar,RhsScalar,scalar_max_op>::ReturnType result_type;
169
174
  EIGEN_EMPTY_STRUCT_CTOR(scalar_max_op)
170
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return numext::maxi(a, b); }
175
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const LhsScalar& a, const RhsScalar& b) const {
176
+ return internal::pmax<NaNPropagation>(a,b);
177
+ }
171
178
  template<typename Packet>
172
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
173
- { return internal::pmax(a,b); }
179
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Packet packetOp(const Packet& a, const Packet& b) const
180
+ {
181
+ return internal::pmax<NaNPropagation>(a,b);
182
+ }
174
183
  template<typename Packet>
175
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type predux(const Packet& a) const
176
- { return internal::predux_max(a); }
184
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type predux(const Packet& a) const
185
+ {
186
+ return internal::predux_max<NaNPropagation>(a);
187
+ }
177
188
  };
178
- template<typename LhsScalar,typename RhsScalar>
179
- struct functor_traits<scalar_max_op<LhsScalar,RhsScalar> > {
189
+
190
+ template<typename LhsScalar,typename RhsScalar, int NaNPropagation>
191
+ struct functor_traits<scalar_max_op<LhsScalar,RhsScalar, NaNPropagation> > {
180
192
  enum {
181
193
  Cost = (NumTraits<LhsScalar>::AddCost+NumTraits<RhsScalar>::AddCost)/2,
182
194
  PacketAccess = internal::is_same<LhsScalar, RhsScalar>::value && packet_traits<LhsScalar>::HasMax
@@ -253,7 +265,6 @@ struct scalar_cmp_op<LhsScalar,RhsScalar, cmp_NEQ> : binary_op_base<LhsScalar,Rh
253
265
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool operator()(const LhsScalar& a, const RhsScalar& b) const {return a!=b;}
254
266
  };
255
267
 
256
-
257
268
  /** \internal
258
269
  * \brief Template functor to compute the hypot of two \b positive \b and \b real scalars
259
270
  *
@@ -287,6 +298,7 @@ struct functor_traits<scalar_hypot_op<Scalar,Scalar> > {
287
298
 
288
299
  /** \internal
289
300
  * \brief Template functor to compute the pow of two scalars
301
+ * See the specification of pow in https://en.cppreference.com/w/cpp/numeric/math/pow
290
302
  */
291
303
  template<typename Scalar, typename Exponent>
292
304
  struct scalar_pow_op : binary_op_base<Scalar,Exponent>
@@ -301,16 +313,31 @@ struct scalar_pow_op : binary_op_base<Scalar,Exponent>
301
313
  EIGEN_SCALAR_BINARY_OP_PLUGIN
302
314
  }
303
315
  #endif
316
+
304
317
  EIGEN_DEVICE_FUNC
305
318
  inline result_type operator() (const Scalar& a, const Exponent& b) const { return numext::pow(a, b); }
319
+
320
+ template<typename Packet>
321
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
322
+ {
323
+ return generic_pow(a,b);
324
+ }
306
325
  };
326
+
307
327
  template<typename Scalar, typename Exponent>
308
328
  struct functor_traits<scalar_pow_op<Scalar,Exponent> > {
309
- enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = false };
329
+ enum {
330
+ Cost = 5 * NumTraits<Scalar>::MulCost,
331
+ PacketAccess = (!NumTraits<Scalar>::IsComplex && !NumTraits<Scalar>::IsInteger &&
332
+ packet_traits<Scalar>::HasExp && packet_traits<Scalar>::HasLog &&
333
+ packet_traits<Scalar>::HasRound && packet_traits<Scalar>::HasCmp &&
334
+ // Temporarly disable packet access for half/bfloat16 until
335
+ // accuracy is improved.
336
+ !is_same<Scalar, half>::value && !is_same<Scalar, bfloat16>::value
337
+ )
338
+ };
310
339
  };
311
340
 
312
-
313
-
314
341
  //---------- non associative binary functors ----------
315
342
 
316
343
  /** \internal
@@ -337,7 +364,7 @@ struct scalar_difference_op : binary_op_base<LhsScalar,RhsScalar>
337
364
  template<typename LhsScalar,typename RhsScalar>
338
365
  struct functor_traits<scalar_difference_op<LhsScalar,RhsScalar> > {
339
366
  enum {
340
- Cost = (NumTraits<LhsScalar>::AddCost+NumTraits<RhsScalar>::AddCost)/2,
367
+ Cost = (int(NumTraits<LhsScalar>::AddCost) + int(NumTraits<RhsScalar>::AddCost)) / 2,
341
368
  PacketAccess = is_same<LhsScalar,RhsScalar>::value && packet_traits<LhsScalar>::HasSub && packet_traits<RhsScalar>::HasSub
342
369
  };
343
370
  };
@@ -382,11 +409,14 @@ struct functor_traits<scalar_quotient_op<LhsScalar,RhsScalar> > {
382
409
  struct scalar_boolean_and_op {
383
410
  EIGEN_EMPTY_STRUCT_CTOR(scalar_boolean_and_op)
384
411
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool operator() (const bool& a, const bool& b) const { return a && b; }
412
+ template<typename Packet>
413
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
414
+ { return internal::pand(a,b); }
385
415
  };
386
416
  template<> struct functor_traits<scalar_boolean_and_op> {
387
417
  enum {
388
418
  Cost = NumTraits<bool>::AddCost,
389
- PacketAccess = false
419
+ PacketAccess = true
390
420
  };
391
421
  };
392
422
 
@@ -398,11 +428,14 @@ template<> struct functor_traits<scalar_boolean_and_op> {
398
428
  struct scalar_boolean_or_op {
399
429
  EIGEN_EMPTY_STRUCT_CTOR(scalar_boolean_or_op)
400
430
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool operator() (const bool& a, const bool& b) const { return a || b; }
431
+ template<typename Packet>
432
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
433
+ { return internal::por(a,b); }
401
434
  };
402
435
  template<> struct functor_traits<scalar_boolean_or_op> {
403
436
  enum {
404
437
  Cost = NumTraits<bool>::AddCost,
405
- PacketAccess = false
438
+ PacketAccess = true
406
439
  };
407
440
  };
408
441
 
@@ -414,11 +447,44 @@ template<> struct functor_traits<scalar_boolean_or_op> {
414
447
  struct scalar_boolean_xor_op {
415
448
  EIGEN_EMPTY_STRUCT_CTOR(scalar_boolean_xor_op)
416
449
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE bool operator() (const bool& a, const bool& b) const { return a ^ b; }
450
+ template<typename Packet>
451
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
452
+ { return internal::pxor(a,b); }
417
453
  };
418
454
  template<> struct functor_traits<scalar_boolean_xor_op> {
419
455
  enum {
420
456
  Cost = NumTraits<bool>::AddCost,
421
- PacketAccess = false
457
+ PacketAccess = true
458
+ };
459
+ };
460
+
461
+ /** \internal
462
+ * \brief Template functor to compute the absolute difference of two scalars
463
+ *
464
+ * \sa class CwiseBinaryOp, MatrixBase::absolute_difference
465
+ */
466
+ template<typename LhsScalar,typename RhsScalar>
467
+ struct scalar_absolute_difference_op : binary_op_base<LhsScalar,RhsScalar>
468
+ {
469
+ typedef typename ScalarBinaryOpTraits<LhsScalar,RhsScalar,scalar_absolute_difference_op>::ReturnType result_type;
470
+ #ifndef EIGEN_SCALAR_BINARY_OP_PLUGIN
471
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_absolute_difference_op)
472
+ #else
473
+ scalar_absolute_difference_op() {
474
+ EIGEN_SCALAR_BINARY_OP_PLUGIN
475
+ }
476
+ #endif
477
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const
478
+ { return numext::absdiff(a,b); }
479
+ template<typename Packet>
480
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a, const Packet& b) const
481
+ { return internal::pabsdiff(a,b); }
482
+ };
483
+ template<typename LhsScalar,typename RhsScalar>
484
+ struct functor_traits<scalar_absolute_difference_op<LhsScalar,RhsScalar> > {
485
+ enum {
486
+ Cost = (NumTraits<LhsScalar>::AddCost+NumTraits<RhsScalar>::AddCost)/2,
487
+ PacketAccess = is_same<LhsScalar,RhsScalar>::value && packet_traits<LhsScalar>::HasAbsDiff
422
488
  };
423
489
  };
424
490
 
@@ -436,7 +502,7 @@ template<typename BinaryOp> struct bind1st_op : BinaryOp {
436
502
  typedef typename BinaryOp::second_argument_type second_argument_type;
437
503
  typedef typename BinaryOp::result_type result_type;
438
504
 
439
- bind1st_op(const first_argument_type &val) : m_value(val) {}
505
+ EIGEN_DEVICE_FUNC explicit bind1st_op(const first_argument_type &val) : m_value(val) {}
440
506
 
441
507
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const second_argument_type& b) const { return BinaryOp::operator()(m_value,b); }
442
508
 
@@ -455,7 +521,7 @@ template<typename BinaryOp> struct bind2nd_op : BinaryOp {
455
521
  typedef typename BinaryOp::second_argument_type second_argument_type;
456
522
  typedef typename BinaryOp::result_type result_type;
457
523
 
458
- bind2nd_op(const second_argument_type &val) : m_value(val) {}
524
+ EIGEN_DEVICE_FUNC explicit bind2nd_op(const second_argument_type &val) : m_value(val) {}
459
525
 
460
526
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const first_argument_type& a) const { return BinaryOp::operator()(a,m_value); }
461
527
 
@@ -37,26 +37,27 @@ template<typename Scalar>
37
37
  struct functor_traits<scalar_identity_op<Scalar> >
38
38
  { enum { Cost = NumTraits<Scalar>::AddCost, PacketAccess = false, IsRepeatable = true }; };
39
39
 
40
- template <typename Scalar, typename Packet, bool IsInteger> struct linspaced_op_impl;
40
+ template <typename Scalar, bool IsInteger> struct linspaced_op_impl;
41
41
 
42
- template <typename Scalar, typename Packet>
43
- struct linspaced_op_impl<Scalar,Packet,/*IsInteger*/false>
42
+ template <typename Scalar>
43
+ struct linspaced_op_impl<Scalar,/*IsInteger*/false>
44
44
  {
45
- linspaced_op_impl(const Scalar& low, const Scalar& high, Index num_steps) :
46
- m_low(low), m_high(high), m_size1(num_steps==1 ? 1 : num_steps-1), m_step(num_steps==1 ? Scalar() : (high-low)/Scalar(num_steps-1)),
45
+ typedef typename NumTraits<Scalar>::Real RealScalar;
46
+
47
+ EIGEN_DEVICE_FUNC linspaced_op_impl(const Scalar& low, const Scalar& high, Index num_steps) :
48
+ m_low(low), m_high(high), m_size1(num_steps==1 ? 1 : num_steps-1), m_step(num_steps==1 ? Scalar() : Scalar((high-low)/RealScalar(num_steps-1))),
47
49
  m_flip(numext::abs(high)<numext::abs(low))
48
50
  {}
49
51
 
50
52
  template<typename IndexType>
51
53
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Scalar operator() (IndexType i) const {
52
- typedef typename NumTraits<Scalar>::Real RealScalar;
53
54
  if(m_flip)
54
- return (i==0)? m_low : (m_high - RealScalar(m_size1-i)*m_step);
55
+ return (i==0)? m_low : Scalar(m_high - RealScalar(m_size1-i)*m_step);
55
56
  else
56
- return (i==m_size1)? m_high : (m_low + RealScalar(i)*m_step);
57
+ return (i==m_size1)? m_high : Scalar(m_low + RealScalar(i)*m_step);
57
58
  }
58
59
 
59
- template<typename IndexType>
60
+ template<typename Packet, typename IndexType>
60
61
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(IndexType i) const
61
62
  {
62
63
  // Principle:
@@ -65,17 +66,17 @@ struct linspaced_op_impl<Scalar,Packet,/*IsInteger*/false>
65
66
  {
66
67
  Packet pi = plset<Packet>(Scalar(i-m_size1));
67
68
  Packet res = padd(pset1<Packet>(m_high), pmul(pset1<Packet>(m_step), pi));
68
- if(i==0)
69
- res = pinsertfirst(res, m_low);
70
- return res;
69
+ if (EIGEN_PREDICT_TRUE(i != 0)) return res;
70
+ Packet mask = pcmp_lt(pset1<Packet>(0), plset<Packet>(0));
71
+ return pselect<Packet>(mask, res, pset1<Packet>(m_low));
71
72
  }
72
73
  else
73
74
  {
74
75
  Packet pi = plset<Packet>(Scalar(i));
75
76
  Packet res = padd(pset1<Packet>(m_low), pmul(pset1<Packet>(m_step), pi));
76
- if(i==m_size1-unpacket_traits<Packet>::size+1)
77
- res = pinsertlast(res, m_high);
78
- return res;
77
+ if(EIGEN_PREDICT_TRUE(i != m_size1-unpacket_traits<Packet>::size+1)) return res;
78
+ Packet mask = pcmp_lt(plset<Packet>(0), pset1<Packet>(unpacket_traits<Packet>::size-1));
79
+ return pselect<Packet>(mask, res, pset1<Packet>(m_high));
79
80
  }
80
81
  }
81
82
 
@@ -86,10 +87,10 @@ struct linspaced_op_impl<Scalar,Packet,/*IsInteger*/false>
86
87
  const bool m_flip;
87
88
  };
88
89
 
89
- template <typename Scalar, typename Packet>
90
- struct linspaced_op_impl<Scalar,Packet,/*IsInteger*/true>
90
+ template <typename Scalar>
91
+ struct linspaced_op_impl<Scalar,/*IsInteger*/true>
91
92
  {
92
- linspaced_op_impl(const Scalar& low, const Scalar& high, Index num_steps) :
93
+ EIGEN_DEVICE_FUNC linspaced_op_impl(const Scalar& low, const Scalar& high, Index num_steps) :
93
94
  m_low(low),
94
95
  m_multiplier((high-low)/convert_index<Scalar>(num_steps<=1 ? 1 : num_steps-1)),
95
96
  m_divisor(convert_index<Scalar>((high>=low?num_steps:-num_steps)+(high-low))/((numext::abs(high-low)+1)==0?1:(numext::abs(high-low)+1))),
@@ -115,8 +116,8 @@ struct linspaced_op_impl<Scalar,Packet,/*IsInteger*/true>
115
116
  // Forward declaration (we default to random access which does not really give
116
117
  // us a speed gain when using packet access but it allows to use the functor in
117
118
  // nested expressions).
118
- template <typename Scalar, typename PacketType> struct linspaced_op;
119
- template <typename Scalar, typename PacketType> struct functor_traits< linspaced_op<Scalar,PacketType> >
119
+ template <typename Scalar> struct linspaced_op;
120
+ template <typename Scalar> struct functor_traits< linspaced_op<Scalar> >
120
121
  {
121
122
  enum
122
123
  {
@@ -126,9 +127,9 @@ template <typename Scalar, typename PacketType> struct functor_traits< linspaced
126
127
  IsRepeatable = true
127
128
  };
128
129
  };
129
- template <typename Scalar, typename PacketType> struct linspaced_op
130
+ template <typename Scalar> struct linspaced_op
130
131
  {
131
- linspaced_op(const Scalar& low, const Scalar& high, Index num_steps)
132
+ EIGEN_DEVICE_FUNC linspaced_op(const Scalar& low, const Scalar& high, Index num_steps)
132
133
  : impl((num_steps==1 ? high : low),high,num_steps)
133
134
  {}
134
135
 
@@ -136,11 +137,11 @@ template <typename Scalar, typename PacketType> struct linspaced_op
136
137
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Scalar operator() (IndexType i) const { return impl(i); }
137
138
 
138
139
  template<typename Packet,typename IndexType>
139
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(IndexType i) const { return impl.packetOp(i); }
140
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(IndexType i) const { return impl.template packetOp<Packet>(i); }
140
141
 
141
142
  // This proxy object handles the actual required temporaries and the different
142
143
  // implementations (integer vs. floating point).
143
- const linspaced_op_impl<Scalar,PacketType,NumTraits<Scalar>::IsInteger> impl;
144
+ const linspaced_op_impl<Scalar,NumTraits<Scalar>::IsInteger> impl;
144
145
  };
145
146
 
146
147
  // Linear access is automatically determined from the operator() prototypes available for the given functor.
@@ -166,12 +167,12 @@ struct has_unary_operator<scalar_identity_op<Scalar>,IndexType> { enum { value =
166
167
  template<typename Scalar,typename IndexType>
167
168
  struct has_binary_operator<scalar_identity_op<Scalar>,IndexType> { enum { value = 1}; };
168
169
 
169
- template<typename Scalar, typename PacketType,typename IndexType>
170
- struct has_nullary_operator<linspaced_op<Scalar,PacketType>,IndexType> { enum { value = 0}; };
171
- template<typename Scalar, typename PacketType,typename IndexType>
172
- struct has_unary_operator<linspaced_op<Scalar,PacketType>,IndexType> { enum { value = 1}; };
173
- template<typename Scalar, typename PacketType,typename IndexType>
174
- struct has_binary_operator<linspaced_op<Scalar,PacketType>,IndexType> { enum { value = 0}; };
170
+ template<typename Scalar,typename IndexType>
171
+ struct has_nullary_operator<linspaced_op<Scalar>,IndexType> { enum { value = 0}; };
172
+ template<typename Scalar,typename IndexType>
173
+ struct has_unary_operator<linspaced_op<Scalar>,IndexType> { enum { value = 1}; };
174
+ template<typename Scalar,typename IndexType>
175
+ struct has_binary_operator<linspaced_op<Scalar>,IndexType> { enum { value = 0}; };
175
176
 
176
177
  template<typename Scalar,typename IndexType>
177
178
  struct has_nullary_operator<scalar_random_op<Scalar>,IndexType> { enum { value = 1}; };
@@ -12,6 +12,28 @@
12
12
 
13
13
  namespace Eigen {
14
14
 
15
+ // Portable replacements for certain functors.
16
+ namespace numext {
17
+
18
+ template<typename T = void>
19
+ struct equal_to {
20
+ typedef bool result_type;
21
+ EIGEN_DEVICE_FUNC bool operator()(const T& lhs, const T& rhs) const {
22
+ return lhs == rhs;
23
+ }
24
+ };
25
+
26
+ template<typename T = void>
27
+ struct not_equal_to {
28
+ typedef bool result_type;
29
+ EIGEN_DEVICE_FUNC bool operator()(const T& lhs, const T& rhs) const {
30
+ return lhs != rhs;
31
+ }
32
+ };
33
+
34
+ }
35
+
36
+
15
37
  namespace internal {
16
38
 
17
39
  // default functor traits for STL functors:
@@ -68,11 +90,19 @@ template<typename T>
68
90
  struct functor_traits<std::equal_to<T> >
69
91
  { enum { Cost = 1, PacketAccess = false }; };
70
92
 
93
+ template<typename T>
94
+ struct functor_traits<numext::equal_to<T> >
95
+ : functor_traits<std::equal_to<T> > {};
96
+
71
97
  template<typename T>
72
98
  struct functor_traits<std::not_equal_to<T> >
73
99
  { enum { Cost = 1, PacketAccess = false }; };
74
100
 
75
- #if (__cplusplus < 201103L) && (EIGEN_COMP_MSVC <= 1900)
101
+ template<typename T>
102
+ struct functor_traits<numext::not_equal_to<T> >
103
+ : functor_traits<std::not_equal_to<T> > {};
104
+
105
+ #if (EIGEN_COMP_CXXVER < 11)
76
106
  // std::binder* are deprecated since c++11 and will be removed in c++17
77
107
  template<typename T>
78
108
  struct functor_traits<std::binder2nd<T> >
@@ -83,7 +113,7 @@ struct functor_traits<std::binder1st<T> >
83
113
  { enum { Cost = functor_traits<T>::Cost, PacketAccess = false }; };
84
114
  #endif
85
115
 
86
- #if (__cplusplus < 201703L) && (EIGEN_COMP_MSVC < 1910)
116
+ #if (EIGEN_COMP_CXXVER < 17)
87
117
  // std::unary_negate is deprecated since c++17 and will be removed in c++20
88
118
  template<typename T>
89
119
  struct functor_traits<std::unary_negate<T> >