tomoto 0.2.2 → 0.3.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +10 -0
- data/README.md +8 -10
- data/ext/tomoto/ct.cpp +11 -11
- data/ext/tomoto/dmr.cpp +14 -13
- data/ext/tomoto/dt.cpp +14 -14
- data/ext/tomoto/extconf.rb +7 -5
- data/ext/tomoto/gdmr.cpp +7 -7
- data/ext/tomoto/hdp.cpp +9 -9
- data/ext/tomoto/hlda.cpp +13 -13
- data/ext/tomoto/hpa.cpp +5 -5
- data/ext/tomoto/lda.cpp +42 -39
- data/ext/tomoto/llda.cpp +6 -6
- data/ext/tomoto/mglda.cpp +15 -15
- data/ext/tomoto/pa.cpp +6 -6
- data/ext/tomoto/plda.cpp +6 -6
- data/ext/tomoto/slda.cpp +8 -8
- data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
- data/ext/tomoto/utils.h +16 -70
- data/lib/tomoto/version.rb +1 -1
- data/lib/tomoto.rb +5 -1
- data/vendor/EigenRand/EigenRand/Core.h +10 -10
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
- data/vendor/EigenRand/EigenRand/EigenRand +11 -6
- data/vendor/EigenRand/EigenRand/Macro.h +13 -7
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
- data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
- data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
- data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
- data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
- data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
- data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
- data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
- data/vendor/EigenRand/EigenRand/doc.h +24 -12
- data/vendor/EigenRand/README.md +57 -4
- data/vendor/eigen/COPYING.APACHE +203 -0
- data/vendor/eigen/COPYING.BSD +1 -1
- data/vendor/eigen/COPYING.MINPACK +51 -52
- data/vendor/eigen/Eigen/Cholesky +0 -1
- data/vendor/eigen/Eigen/Core +112 -265
- data/vendor/eigen/Eigen/Eigenvalues +2 -3
- data/vendor/eigen/Eigen/Geometry +5 -8
- data/vendor/eigen/Eigen/Householder +0 -1
- data/vendor/eigen/Eigen/Jacobi +0 -1
- data/vendor/eigen/Eigen/KLUSupport +41 -0
- data/vendor/eigen/Eigen/LU +2 -5
- data/vendor/eigen/Eigen/OrderingMethods +0 -3
- data/vendor/eigen/Eigen/PaStiXSupport +1 -0
- data/vendor/eigen/Eigen/PardisoSupport +0 -0
- data/vendor/eigen/Eigen/QR +2 -3
- data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
- data/vendor/eigen/Eigen/SVD +0 -1
- data/vendor/eigen/Eigen/Sparse +0 -2
- data/vendor/eigen/Eigen/SparseCholesky +0 -8
- data/vendor/eigen/Eigen/SparseLU +4 -0
- data/vendor/eigen/Eigen/SparseQR +0 -1
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
- data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
- data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
- data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
- data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
- data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
- data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
- data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
- data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
- data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
- data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
- data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
- data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
- data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
- data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
- data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
- data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
- data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
- data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
- data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
- data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
- data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
- data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
- data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
- data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
- data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
- data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
- data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
- data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
- data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
- data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
- data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
- data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
- data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
- data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
- data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
- data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
- data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
- data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
- data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
- data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
- data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
- data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
- data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
- data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
- data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
- data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
- data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
- data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
- data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
- data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
- data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
- data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
- data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
- data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
- data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
- data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
- data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
- data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
- data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
- data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
- data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
- data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
- data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
- data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
- data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
- data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
- data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
- data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
- data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
- data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
- data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
- data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
- data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
- data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
- data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
- data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
- data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
- data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
- data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
- data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
- data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
- data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
- data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
- data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
- data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
- data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
- data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
- data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
- data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
- data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
- data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
- data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
- data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
- data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
- data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
- data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
- data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
- data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
- data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
- data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
- data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
- data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
- data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
- data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
- data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
- data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
- data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/eigen/README.md +2 -0
- data/vendor/eigen/bench/btl/README +1 -1
- data/vendor/eigen/bench/tensors/README +6 -7
- data/vendor/eigen/ci/README.md +56 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
- data/vendor/eigen/unsupported/README.txt +1 -1
- data/vendor/tomotopy/README.kr.rst +78 -0
- data/vendor/tomotopy/README.rst +75 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
- data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
- data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
- data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
- data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
- data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
- data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
- data/vendor/tomotopy/src/Utils/exception.h +6 -0
- data/vendor/tomotopy/src/Utils/math.h +2 -2
- data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
- data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
- data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
- metadata +64 -18
- data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
- data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -45,22 +45,24 @@ template <typename Scalar, typename Index,
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int ResStorageOrder, int
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int ResStorageOrder, int ResInnerStride,
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int Version = Specialized>
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struct product_triangular_matrix_matrix;
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int RhsStorageOrder, bool ConjugateRhs,
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int RhsStorageOrder, bool ConjugateRhs,
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int ResInnerStride, int Version>
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struct product_triangular_matrix_matrix<Scalar,Index,Mode,LhsIsTriangular,
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static EIGEN_STRONG_INLINE void run(
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product_triangular_matrix_matrix<Scalar, Index,
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ColMajor>
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::run(cols, rows, depth, rhs, rhsStride, lhs, lhsStride, res, resStride, alpha, blocking);
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::run(cols, rows, depth, rhs, rhsStride, lhs, lhsStride, res, resIncr, resStride, alpha, blocking);
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int RhsStorageOrder, bool ConjugateRhs,
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int ResInnerStride, int Version>
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struct product_triangular_matrix_matrix<Scalar,Index,Mode,true,
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int RhsStorageOrder, bool ConjugateRhs,
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int ResInnerStride, int Version>
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typedef const_blas_data_mapper<Scalar, Index, LhsStorageOrder> LhsMapper;
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int RhsStorageOrder, bool ConjugateRhs,
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typedef blas_data_mapper<typename Traits::ResScalar, Index, ColMajor, Unaligned, ResInnerStride> ResMapper;
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(internal::traits<Dest >::Flags&RowMajorBit) ? RowMajor : ColMajor>
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(internal::traits<Dest >::Flags&RowMajorBit) ? RowMajor : ColMajor, Dest::InnerStrideAtCompileTime>
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::run(
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&lhs.coeffRef(0,0), lhs.outerStride(), // lhs info
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&dst.coeffRef(0,0), dst.outerStride(), // result info
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&dst.coeffRef(0,0), dst.innerStride(), dst.outerStride(), // result info
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actualAlpha, blocking
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product_triangular_matrix_matrix<Scalar,Index,Mode,
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LhsIsTriangular,LhsStorageOrder,ConjugateLhs,
|
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RhsStorageOrder, ConjugateRhs, ResStorageOrder, BuiltIn> {};
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RhsStorageOrder, ConjugateRhs, ResStorageOrder, 1, BuiltIn> {};
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// try to go to BLAS specialization
|
@@ -55,13 +55,15 @@ template <typename Index, int Mode, \
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int LhsStorageOrder, bool ConjugateLhs, \
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int RhsStorageOrder, bool ConjugateRhs> \
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struct product_triangular_matrix_matrix<Scalar,Index, Mode, LhsIsTriangular, \
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LhsStorageOrder,ConjugateLhs, RhsStorageOrder,ConjugateRhs,ColMajor,Specialized> { \
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LhsStorageOrder,ConjugateLhs, RhsStorageOrder,ConjugateRhs,ColMajor,1,Specialized> { \
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static inline void run(Index _rows, Index _cols, Index _depth, const Scalar* _lhs, Index lhsStride,\
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const Scalar* _rhs, Index rhsStride, Scalar* res, Index resStride, Scalar alpha, level3_blocking<Scalar,Scalar>& blocking) { \
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const Scalar* _rhs, Index rhsStride, Scalar* res, Index resIncr, Index resStride, Scalar alpha, level3_blocking<Scalar,Scalar>& blocking) { \
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EIGEN_ONLY_USED_FOR_DEBUG(resIncr); \
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eigen_assert(resIncr == 1); \
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product_triangular_matrix_matrix_trmm<Scalar,Index,Mode, \
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|
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_rows, _cols, _depth, _lhs, lhsStride, _rhs, rhsStride, res, resStride, alpha, blocking); \
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} \
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@@ -115,8 +117,8 @@ struct product_triangular_matrix_matrix_trmm<EIGTYPE,Index,Mode,true, \
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if (((nthr==1) && (((std::max)(rows,depth)-diagSize)/(double)diagSize < 0.5))) { \
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/* Most likely no benefit to call TRMM or GEMM from BLAS */ \
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product_triangular_matrix_matrix<EIGTYPE,Index,Mode,true, \
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LhsStorageOrder,ConjugateLhs, RhsStorageOrder, ConjugateRhs, ColMajor, BuiltIn>::run( \
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_rows, _cols, _depth, _lhs, lhsStride, _rhs, rhsStride, res, resStride, alpha, blocking); \
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LhsStorageOrder,ConjugateLhs, RhsStorageOrder, ConjugateRhs, ColMajor, 1, BuiltIn>::run( \
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_rows, _cols, _depth, _lhs, lhsStride, _rhs, rhsStride, res, 1, resStride, alpha, blocking); \
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gemm_blocking_space<ColMajor,EIGTYPE,EIGTYPE,Dynamic,Dynamic,Dynamic> gemm_blocking(_rows,_cols,_depth, 1, true); \
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general_matrix_matrix_product<Index,EIGTYPE,LhsStorageOrder,ConjugateLhs,EIGTYPE,RhsStorageOrder,ConjugateRhs,ColMajor>::run( \
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rows, cols, depth, aa_tmp.data(), aStride, _rhs, rhsStride, res, resStride, alpha, gemm_blocking, 0); \
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rows, cols, depth, aa_tmp.data(), aStride, _rhs, rhsStride, res, 1, resStride, alpha, gemm_blocking, 0); \
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\
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_rows, _cols, _depth, _lhs, lhsStride, _rhs, rhsStride, res, resStride, alpha, blocking); \
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LhsStorageOrder,ConjugateLhs, RhsStorageOrder, ConjugateRhs, ColMajor, 1, BuiltIn>::run( \
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_rows, _cols, _depth, _lhs, lhsStride, _rhs, rhsStride, res, 1, resStride, alpha, blocking); \
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general_matrix_matrix_product<Index,EIGTYPE,LhsStorageOrder,ConjugateLhs,EIGTYPE,RhsStorageOrder,ConjugateRhs,ColMajor>::run( \
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rows, cols, depth, _lhs, lhsStride, aa_tmp.data(), aStride, res, resStride, alpha, gemm_blocking, 0); \
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general_matrix_matrix_product<Index,EIGTYPE,LhsStorageOrder,ConjugateLhs,EIGTYPE,RhsStorageOrder,ConjugateRhs,ColMajor,1>::run( \
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rows, cols, depth, _lhs, lhsStride, aa_tmp.data(), aStride, res, 1, resStride, alpha, gemm_blocking, 0); \
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\
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@@ -15,48 +15,48 @@ namespace Eigen {
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namespace internal {
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// if the rhs is row major, let's transpose the product
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template <typename Scalar, typename Index, int Side, int Mode, bool Conjugate, int TriStorageOrder>
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struct triangular_solve_matrix<Scalar,Index,Side,Mode,Conjugate,TriStorageOrder,RowMajor>
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template <typename Scalar, typename Index, int Side, int Mode, bool Conjugate, int TriStorageOrder, int OtherInnerStride>
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struct triangular_solve_matrix<Scalar,Index,Side,Mode,Conjugate,TriStorageOrder,RowMajor,OtherInnerStride>
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{
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static void run(
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const Scalar* tri, Index triStride,
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Scalar* _other, Index otherStride,
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Scalar* _other, Index otherIncr, Index otherStride,
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level3_blocking<Scalar,Scalar>& blocking)
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{
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triangular_solve_matrix<
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Scalar, Index, Side==OnTheLeft?OnTheRight:OnTheLeft,
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(Mode&UnitDiag) | ((Mode&Upper) ? Lower : Upper),
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NumTraits<Scalar>::IsComplex && Conjugate,
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TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor>
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::run(size, cols, tri, triStride, _other, otherStride, blocking);
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+
TriStorageOrder==RowMajor ? ColMajor : RowMajor, ColMajor, OtherInnerStride>
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::run(size, cols, tri, triStride, _other, otherIncr, otherStride, blocking);
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}
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};
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/* Optimized triangular solver with multiple right hand side and the triangular matrix on the left
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*/
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template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder>
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struct triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conjugate,TriStorageOrder,ColMajor>
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+
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder,int OtherInnerStride>
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struct triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conjugate,TriStorageOrder,ColMajor,OtherInnerStride>
|
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{
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static EIGEN_DONT_INLINE void run(
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Index size, Index otherSize,
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const Scalar* _tri, Index triStride,
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Scalar* _other, Index otherStride,
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+
Scalar* _other, Index otherIncr, Index otherStride,
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level3_blocking<Scalar,Scalar>& blocking);
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};
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-
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder>
|
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-
EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conjugate,TriStorageOrder,ColMajor>::run(
|
47
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+
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder, int OtherInnerStride>
|
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|
+
EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conjugate,TriStorageOrder,ColMajor,OtherInnerStride>::run(
|
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Index size, Index otherSize,
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const Scalar* _tri, Index triStride,
|
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-
Scalar* _other, Index otherStride,
|
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+
Scalar* _other, Index otherIncr, Index otherStride,
|
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|
level3_blocking<Scalar,Scalar>& blocking)
|
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53
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{
|
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Index cols = otherSize;
|
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|
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typedef const_blas_data_mapper<Scalar, Index, TriStorageOrder> TriMapper;
|
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|
-
typedef blas_data_mapper<Scalar, Index, ColMajor> OtherMapper;
|
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+
typedef blas_data_mapper<Scalar, Index, ColMajor, Unaligned, OtherInnerStride> OtherMapper;
|
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|
TriMapper tri(_tri, triStride);
|
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|
-
OtherMapper other(_other, otherStride);
|
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+
OtherMapper other(_other, otherStride, otherIncr);
|
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|
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|
typedef gebp_traits<Scalar,Scalar> Traits;
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|
|
@@ -76,7 +76,7 @@ EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conju
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|
77
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|
conj_if<Conjugate> conj;
|
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78
|
gebp_kernel<Scalar, Scalar, Index, OtherMapper, Traits::mr, Traits::nr, Conjugate, false> gebp_kernel;
|
79
|
-
gemm_pack_lhs<Scalar, Index, TriMapper, Traits::mr, Traits::LhsProgress, TriStorageOrder> pack_lhs;
|
79
|
+
gemm_pack_lhs<Scalar, Index, TriMapper, Traits::mr, Traits::LhsProgress, typename Traits::LhsPacket4Packing, TriStorageOrder> pack_lhs;
|
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80
|
gemm_pack_rhs<Scalar, Index, OtherMapper, Traits::nr, ColMajor, false, true> pack_rhs;
|
81
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|
|
82
82
|
// the goal here is to subdivise the Rhs panels such that we keep some cache
|
@@ -128,19 +128,21 @@ EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conju
|
|
128
128
|
{
|
129
129
|
Scalar b(0);
|
130
130
|
const Scalar* l = &tri(i,s);
|
131
|
-
|
131
|
+
typename OtherMapper::LinearMapper r = other.getLinearMapper(s,j);
|
132
132
|
for (Index i3=0; i3<k; ++i3)
|
133
|
-
b += conj(l[i3]) * r
|
133
|
+
b += conj(l[i3]) * r(i3);
|
134
134
|
|
135
135
|
other(i,j) = (other(i,j) - b)*a;
|
136
136
|
}
|
137
137
|
else
|
138
138
|
{
|
139
|
-
Scalar
|
140
|
-
|
141
|
-
|
139
|
+
Scalar& otherij = other(i,j);
|
140
|
+
otherij *= a;
|
141
|
+
Scalar b = otherij;
|
142
|
+
typename OtherMapper::LinearMapper r = other.getLinearMapper(s,j);
|
143
|
+
typename TriMapper::LinearMapper l = tri.getLinearMapper(s,i);
|
142
144
|
for (Index i3=0;i3<rs;++i3)
|
143
|
-
r
|
145
|
+
r(i3) -= b * conj(l(i3));
|
144
146
|
}
|
145
147
|
}
|
146
148
|
}
|
@@ -185,28 +187,28 @@ EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheLeft,Mode,Conju
|
|
185
187
|
|
186
188
|
/* Optimized triangular solver with multiple left hand sides and the triangular matrix on the right
|
187
189
|
*/
|
188
|
-
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder>
|
189
|
-
struct triangular_solve_matrix<Scalar,Index,OnTheRight,Mode,Conjugate,TriStorageOrder,ColMajor>
|
190
|
+
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder, int OtherInnerStride>
|
191
|
+
struct triangular_solve_matrix<Scalar,Index,OnTheRight,Mode,Conjugate,TriStorageOrder,ColMajor,OtherInnerStride>
|
190
192
|
{
|
191
193
|
static EIGEN_DONT_INLINE void run(
|
192
194
|
Index size, Index otherSize,
|
193
195
|
const Scalar* _tri, Index triStride,
|
194
|
-
Scalar* _other, Index otherStride,
|
196
|
+
Scalar* _other, Index otherIncr, Index otherStride,
|
195
197
|
level3_blocking<Scalar,Scalar>& blocking);
|
196
198
|
};
|
197
|
-
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder>
|
198
|
-
EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheRight,Mode,Conjugate,TriStorageOrder,ColMajor>::run(
|
199
|
+
template <typename Scalar, typename Index, int Mode, bool Conjugate, int TriStorageOrder, int OtherInnerStride>
|
200
|
+
EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheRight,Mode,Conjugate,TriStorageOrder,ColMajor,OtherInnerStride>::run(
|
199
201
|
Index size, Index otherSize,
|
200
202
|
const Scalar* _tri, Index triStride,
|
201
|
-
Scalar* _other, Index otherStride,
|
203
|
+
Scalar* _other, Index otherIncr, Index otherStride,
|
202
204
|
level3_blocking<Scalar,Scalar>& blocking)
|
203
205
|
{
|
204
206
|
Index rows = otherSize;
|
205
207
|
typedef typename NumTraits<Scalar>::Real RealScalar;
|
206
208
|
|
207
|
-
typedef blas_data_mapper<Scalar, Index, ColMajor> LhsMapper;
|
209
|
+
typedef blas_data_mapper<Scalar, Index, ColMajor, Unaligned, OtherInnerStride> LhsMapper;
|
208
210
|
typedef const_blas_data_mapper<Scalar, Index, TriStorageOrder> RhsMapper;
|
209
|
-
LhsMapper lhs(_other, otherStride);
|
211
|
+
LhsMapper lhs(_other, otherStride, otherIncr);
|
210
212
|
RhsMapper rhs(_tri, triStride);
|
211
213
|
|
212
214
|
typedef gebp_traits<Scalar,Scalar> Traits;
|
@@ -229,7 +231,7 @@ EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheRight,Mode,Conj
|
|
229
231
|
gebp_kernel<Scalar, Scalar, Index, LhsMapper, Traits::mr, Traits::nr, false, Conjugate> gebp_kernel;
|
230
232
|
gemm_pack_rhs<Scalar, Index, RhsMapper, Traits::nr, RhsStorageOrder> pack_rhs;
|
231
233
|
gemm_pack_rhs<Scalar, Index, RhsMapper, Traits::nr, RhsStorageOrder,false,true> pack_rhs_panel;
|
232
|
-
gemm_pack_lhs<Scalar, Index, LhsMapper, Traits::mr, Traits::LhsProgress, ColMajor, false, true> pack_lhs_panel;
|
234
|
+
gemm_pack_lhs<Scalar, Index, LhsMapper, Traits::mr, Traits::LhsProgress, typename Traits::LhsPacket4Packing, ColMajor, false, true> pack_lhs_panel;
|
233
235
|
|
234
236
|
for(Index k2=IsLower ? size : 0;
|
235
237
|
IsLower ? k2>0 : k2<size;
|
@@ -297,24 +299,24 @@ EIGEN_DONT_INLINE void triangular_solve_matrix<Scalar,Index,OnTheRight,Mode,Conj
|
|
297
299
|
{
|
298
300
|
Index j = IsLower ? absolute_j2+actualPanelWidth-k-1 : absolute_j2+k;
|
299
301
|
|
300
|
-
|
302
|
+
typename LhsMapper::LinearMapper r = lhs.getLinearMapper(i2,j);
|
301
303
|
for (Index k3=0; k3<k; ++k3)
|
302
304
|
{
|
303
305
|
Scalar b = conj(rhs(IsLower ? j+1+k3 : absolute_j2+k3,j));
|
304
|
-
|
306
|
+
typename LhsMapper::LinearMapper a = lhs.getLinearMapper(i2,IsLower ? j+1+k3 : absolute_j2+k3);
|
305
307
|
for (Index i=0; i<actual_mc; ++i)
|
306
|
-
r
|
308
|
+
r(i) -= a(i) * b;
|
307
309
|
}
|
308
310
|
if((Mode & UnitDiag)==0)
|
309
311
|
{
|
310
312
|
Scalar inv_rjj = RealScalar(1)/conj(rhs(j,j));
|
311
313
|
for (Index i=0; i<actual_mc; ++i)
|
312
|
-
r
|
314
|
+
r(i) *= inv_rjj;
|
313
315
|
}
|
314
316
|
}
|
315
317
|
|
316
318
|
// pack the just computed part of lhs to A
|
317
|
-
pack_lhs_panel(blockA,
|
319
|
+
pack_lhs_panel(blockA, lhs.getSubMapper(i2,absolute_j2),
|
318
320
|
actualPanelWidth, actual_mc,
|
319
321
|
actual_kc, j2);
|
320
322
|
}
|
@@ -40,7 +40,7 @@ namespace internal {
|
|
40
40
|
// implements LeftSide op(triangular)^-1 * general
|
41
41
|
#define EIGEN_BLAS_TRSM_L(EIGTYPE, BLASTYPE, BLASFUNC) \
|
42
42
|
template <typename Index, int Mode, bool Conjugate, int TriStorageOrder> \
|
43
|
-
struct triangular_solve_matrix<EIGTYPE,Index,OnTheLeft,Mode,Conjugate,TriStorageOrder,ColMajor> \
|
43
|
+
struct triangular_solve_matrix<EIGTYPE,Index,OnTheLeft,Mode,Conjugate,TriStorageOrder,ColMajor,1> \
|
44
44
|
{ \
|
45
45
|
enum { \
|
46
46
|
IsLower = (Mode&Lower) == Lower, \
|
@@ -51,8 +51,10 @@ struct triangular_solve_matrix<EIGTYPE,Index,OnTheLeft,Mode,Conjugate,TriStorage
|
|
51
51
|
static void run( \
|
52
52
|
Index size, Index otherSize, \
|
53
53
|
const EIGTYPE* _tri, Index triStride, \
|
54
|
-
EIGTYPE* _other, Index otherStride, level3_blocking<EIGTYPE,EIGTYPE>& /*blocking*/) \
|
54
|
+
EIGTYPE* _other, Index otherIncr, Index otherStride, level3_blocking<EIGTYPE,EIGTYPE>& /*blocking*/) \
|
55
55
|
{ \
|
56
|
+
EIGEN_ONLY_USED_FOR_DEBUG(otherIncr); \
|
57
|
+
eigen_assert(otherIncr == 1); \
|
56
58
|
BlasIndex m = convert_index<BlasIndex>(size), n = convert_index<BlasIndex>(otherSize), lda, ldb; \
|
57
59
|
char side = 'L', uplo, diag='N', transa; \
|
58
60
|
/* Set alpha_ */ \
|
@@ -99,7 +101,7 @@ EIGEN_BLAS_TRSM_L(scomplex, float, ctrsm_)
|
|
99
101
|
// implements RightSide general * op(triangular)^-1
|
100
102
|
#define EIGEN_BLAS_TRSM_R(EIGTYPE, BLASTYPE, BLASFUNC) \
|
101
103
|
template <typename Index, int Mode, bool Conjugate, int TriStorageOrder> \
|
102
|
-
struct triangular_solve_matrix<EIGTYPE,Index,OnTheRight,Mode,Conjugate,TriStorageOrder,ColMajor> \
|
104
|
+
struct triangular_solve_matrix<EIGTYPE,Index,OnTheRight,Mode,Conjugate,TriStorageOrder,ColMajor,1> \
|
103
105
|
{ \
|
104
106
|
enum { \
|
105
107
|
IsLower = (Mode&Lower) == Lower, \
|
@@ -110,8 +112,10 @@ struct triangular_solve_matrix<EIGTYPE,Index,OnTheRight,Mode,Conjugate,TriStorag
|
|
110
112
|
static void run( \
|
111
113
|
Index size, Index otherSize, \
|
112
114
|
const EIGTYPE* _tri, Index triStride, \
|
113
|
-
EIGTYPE* _other, Index otherStride, level3_blocking<EIGTYPE,EIGTYPE>& /*blocking*/) \
|
115
|
+
EIGTYPE* _other, Index otherIncr, Index otherStride, level3_blocking<EIGTYPE,EIGTYPE>& /*blocking*/) \
|
114
116
|
{ \
|
117
|
+
EIGEN_ONLY_USED_FOR_DEBUG(otherIncr); \
|
118
|
+
eigen_assert(otherIncr == 1); \
|
115
119
|
BlasIndex m = convert_index<BlasIndex>(otherSize), n = convert_index<BlasIndex>(size), lda, ldb; \
|
116
120
|
char side = 'R', uplo, diag='N', transa; \
|
117
121
|
/* Set alpha_ */ \
|
@@ -58,7 +58,7 @@ struct triangular_solve_vector<LhsScalar, RhsScalar, Index, OnTheLeft, Mode, Con
|
|
58
58
|
{
|
59
59
|
// let's directly call the low level product function because:
|
60
60
|
// 1 - it is faster to compile
|
61
|
-
// 2 - it is
|
61
|
+
// 2 - it is slightly faster at runtime
|
62
62
|
Index startRow = IsLower ? pi : pi-actualPanelWidth;
|
63
63
|
Index startCol = IsLower ? 0 : pi;
|
64
64
|
|
@@ -77,7 +77,7 @@ struct triangular_solve_vector<LhsScalar, RhsScalar, Index, OnTheLeft, Mode, Con
|
|
77
77
|
if (k>0)
|
78
78
|
rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map<const Matrix<RhsScalar,Dynamic,1> >(rhs+s,k))).sum();
|
79
79
|
|
80
|
-
if(!(Mode & UnitDiag))
|
80
|
+
if((!(Mode & UnitDiag)) && numext::not_equal_strict(rhs[i],RhsScalar(0)))
|
81
81
|
rhs[i] /= cjLhs(i,i);
|
82
82
|
}
|
83
83
|
}
|
@@ -114,20 +114,23 @@ struct triangular_solve_vector<LhsScalar, RhsScalar, Index, OnTheLeft, Mode, Con
|
|
114
114
|
for(Index k=0; k<actualPanelWidth; ++k)
|
115
115
|
{
|
116
116
|
Index i = IsLower ? pi+k : pi-k-1;
|
117
|
-
if(
|
118
|
-
|
119
|
-
|
120
|
-
|
121
|
-
|
122
|
-
|
123
|
-
|
117
|
+
if(numext::not_equal_strict(rhs[i],RhsScalar(0)))
|
118
|
+
{
|
119
|
+
if(!(Mode & UnitDiag))
|
120
|
+
rhs[i] /= cjLhs.coeff(i,i);
|
121
|
+
|
122
|
+
Index r = actualPanelWidth - k - 1; // remaining size
|
123
|
+
Index s = IsLower ? i+1 : i-r;
|
124
|
+
if (r>0)
|
125
|
+
Map<Matrix<RhsScalar,Dynamic,1> >(rhs+s,r) -= rhs[i] * cjLhs.col(i).segment(s,r);
|
126
|
+
}
|
124
127
|
}
|
125
128
|
Index r = IsLower ? size - endBlock : startBlock; // remaining size
|
126
129
|
if (r > 0)
|
127
130
|
{
|
128
131
|
// let's directly call the low level product function because:
|
129
132
|
// 1 - it is faster to compile
|
130
|
-
// 2 - it is
|
133
|
+
// 2 - it is slightly faster at runtime
|
131
134
|
general_matrix_vector_product<Index,LhsScalar,LhsMapper,ColMajor,Conjugate,RhsScalar,RhsMapper,false>::run(
|
132
135
|
r, actualPanelWidth,
|
133
136
|
LhsMapper(&lhs.coeffRef(endBlock,startBlock), lhsStride),
|