tomoto 0.2.2 → 0.3.0

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Files changed (369) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +10 -0
  3. data/README.md +8 -10
  4. data/ext/tomoto/ct.cpp +11 -11
  5. data/ext/tomoto/dmr.cpp +14 -13
  6. data/ext/tomoto/dt.cpp +14 -14
  7. data/ext/tomoto/extconf.rb +7 -5
  8. data/ext/tomoto/gdmr.cpp +7 -7
  9. data/ext/tomoto/hdp.cpp +9 -9
  10. data/ext/tomoto/hlda.cpp +13 -13
  11. data/ext/tomoto/hpa.cpp +5 -5
  12. data/ext/tomoto/lda.cpp +42 -39
  13. data/ext/tomoto/llda.cpp +6 -6
  14. data/ext/tomoto/mglda.cpp +15 -15
  15. data/ext/tomoto/pa.cpp +6 -6
  16. data/ext/tomoto/plda.cpp +6 -6
  17. data/ext/tomoto/slda.cpp +8 -8
  18. data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
  19. data/ext/tomoto/utils.h +16 -70
  20. data/lib/tomoto/version.rb +1 -1
  21. data/lib/tomoto.rb +5 -1
  22. data/vendor/EigenRand/EigenRand/Core.h +10 -10
  23. data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
  24. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
  25. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
  26. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
  27. data/vendor/EigenRand/EigenRand/EigenRand +11 -6
  28. data/vendor/EigenRand/EigenRand/Macro.h +13 -7
  29. data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
  30. data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
  31. data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
  32. data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
  33. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
  34. data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
  35. data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
  36. data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
  37. data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
  38. data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
  39. data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
  40. data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
  41. data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
  42. data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
  43. data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
  44. data/vendor/EigenRand/EigenRand/doc.h +24 -12
  45. data/vendor/EigenRand/README.md +57 -4
  46. data/vendor/eigen/COPYING.APACHE +203 -0
  47. data/vendor/eigen/COPYING.BSD +1 -1
  48. data/vendor/eigen/COPYING.MINPACK +51 -52
  49. data/vendor/eigen/Eigen/Cholesky +0 -1
  50. data/vendor/eigen/Eigen/Core +112 -265
  51. data/vendor/eigen/Eigen/Eigenvalues +2 -3
  52. data/vendor/eigen/Eigen/Geometry +5 -8
  53. data/vendor/eigen/Eigen/Householder +0 -1
  54. data/vendor/eigen/Eigen/Jacobi +0 -1
  55. data/vendor/eigen/Eigen/KLUSupport +41 -0
  56. data/vendor/eigen/Eigen/LU +2 -5
  57. data/vendor/eigen/Eigen/OrderingMethods +0 -3
  58. data/vendor/eigen/Eigen/PaStiXSupport +1 -0
  59. data/vendor/eigen/Eigen/PardisoSupport +0 -0
  60. data/vendor/eigen/Eigen/QR +2 -3
  61. data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
  62. data/vendor/eigen/Eigen/SVD +0 -1
  63. data/vendor/eigen/Eigen/Sparse +0 -2
  64. data/vendor/eigen/Eigen/SparseCholesky +0 -8
  65. data/vendor/eigen/Eigen/SparseLU +4 -0
  66. data/vendor/eigen/Eigen/SparseQR +0 -1
  67. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
  68. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
  69. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
  70. data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
  71. data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
  72. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
  73. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
  74. data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
  75. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
  76. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
  77. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
  78. data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
  79. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
  80. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
  81. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
  82. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
  83. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
  84. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
  85. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
  86. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
  87. data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
  88. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
  89. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
  90. data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
  91. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
  92. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
  93. data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
  94. data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
  95. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
  96. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
  97. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
  98. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
  99. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
  100. data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
  101. data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
  102. data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
  103. data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
  104. data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
  105. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
  106. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
  107. data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
  108. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
  109. data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
  110. data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
  111. data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
  112. data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  113. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
  114. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
  115. data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
  116. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
  117. data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
  118. data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
  119. data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
  120. data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
  121. data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
  122. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
  123. data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
  124. data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
  125. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
  126. data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
  127. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
  128. data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
  129. data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
  130. data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
  131. data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
  132. data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
  133. data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
  134. data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
  135. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
  136. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
  137. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
  138. data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
  139. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
  140. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
  141. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
  142. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
  143. data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
  145. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
  146. data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
  148. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
  149. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
  153. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
  154. data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  155. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
  156. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  157. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  158. data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
  160. data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  161. data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
  162. data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  163. data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  164. data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  165. data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  166. data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  167. data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  168. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
  169. data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  170. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
  171. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
  172. data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  173. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
  174. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
  175. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
  176. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
  177. data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  178. data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  179. data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  180. data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  181. data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  182. data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  183. data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  184. data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  185. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
  186. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
  187. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
  188. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
  189. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
  190. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
  191. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
  192. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
  193. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
  194. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
  195. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
  196. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
  197. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
  198. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
  199. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
  200. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
  201. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
  202. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
  203. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
  204. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
  205. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
  206. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
  207. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
  208. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
  209. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
  210. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
  211. data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  212. data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
  213. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
  214. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
  215. data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  216. data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
  217. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
  218. data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
  219. data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
  220. data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
  221. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
  222. data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  223. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
  224. data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  225. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
  226. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
  227. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
  228. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
  229. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
  230. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
  231. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
  232. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
  233. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
  234. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
  235. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
  236. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
  237. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
  238. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
  239. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
  240. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
  241. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
  242. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
  243. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
  244. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
  245. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
  246. data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
  247. data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
  248. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
  249. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  250. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
  251. data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
  252. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
  253. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
  254. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
  255. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
  256. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
  257. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
  258. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
  259. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
  260. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
  261. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
  262. data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  263. data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
  264. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
  265. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
  266. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
  267. data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
  268. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
  269. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
  270. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
  271. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
  272. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
  273. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
  274. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
  275. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
  276. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
  277. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
  278. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
  279. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
  280. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
  281. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
  282. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
  283. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
  284. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
  285. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
  286. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
  287. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
  288. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
  289. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
  290. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
  291. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
  292. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
  293. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
  294. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
  295. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
  296. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
  297. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
  298. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
  299. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
  300. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
  301. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
  302. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
  303. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
  304. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
  305. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
  306. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
  307. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
  308. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
  309. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
  310. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
  311. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
  312. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
  313. data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
  314. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
  315. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
  316. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
  317. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
  318. data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  319. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
  320. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
  321. data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
  322. data/vendor/eigen/README.md +2 -0
  323. data/vendor/eigen/bench/btl/README +1 -1
  324. data/vendor/eigen/bench/tensors/README +6 -7
  325. data/vendor/eigen/ci/README.md +56 -0
  326. data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
  327. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
  328. data/vendor/eigen/unsupported/README.txt +1 -1
  329. data/vendor/tomotopy/README.kr.rst +78 -0
  330. data/vendor/tomotopy/README.rst +75 -0
  331. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
  332. data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
  333. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
  334. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
  335. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
  336. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
  337. data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
  338. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
  339. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
  340. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
  341. data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
  342. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
  343. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
  344. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
  345. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
  346. data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
  347. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
  348. data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
  349. data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
  350. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
  351. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
  352. data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
  353. data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
  354. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
  355. data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
  356. data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
  357. data/vendor/tomotopy/src/Utils/exception.h +6 -0
  358. data/vendor/tomotopy/src/Utils/math.h +2 -2
  359. data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
  360. data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
  361. data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
  362. metadata +64 -18
  363. data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
  364. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
  365. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
  366. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
  367. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
  368. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
  369. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -109,7 +109,7 @@ struct functor_traits<scalar_abs2_op<Scalar> >
109
109
  template<typename Scalar> struct scalar_conjugate_op {
110
110
  EIGEN_EMPTY_STRUCT_CTOR(scalar_conjugate_op)
111
111
  EIGEN_DEVICE_FUNC
112
- EIGEN_STRONG_INLINE const Scalar operator() (const Scalar& a) const { using numext::conj; return conj(a); }
112
+ EIGEN_STRONG_INLINE const Scalar operator() (const Scalar& a) const { return numext::conj(a); }
113
113
  template<typename Packet>
114
114
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a) const { return internal::pconj(a); }
115
115
  };
@@ -117,7 +117,15 @@ template<typename Scalar>
117
117
  struct functor_traits<scalar_conjugate_op<Scalar> >
118
118
  {
119
119
  enum {
120
- Cost = NumTraits<Scalar>::IsComplex ? NumTraits<Scalar>::AddCost : 0,
120
+ Cost = 0,
121
+ // Yes the cost is zero even for complexes because in most cases for which
122
+ // the cost is used, conjugation turns to be a no-op. Some examples:
123
+ // cost(a*conj(b)) == cost(a*b)
124
+ // cost(a+conj(b)) == cost(a+b)
125
+ // <etc.
126
+ // If we don't set it to zero, then:
127
+ // A.conjugate().lazyProduct(B.conjugate())
128
+ // will bake its operands. We definitely don't want that!
121
129
  PacketAccess = packet_traits<Scalar>::HasConj
122
130
  };
123
131
  };
@@ -130,7 +138,7 @@ struct functor_traits<scalar_conjugate_op<Scalar> >
130
138
  template<typename Scalar> struct scalar_arg_op {
131
139
  EIGEN_EMPTY_STRUCT_CTOR(scalar_arg_op)
132
140
  typedef typename NumTraits<Scalar>::Real result_type;
133
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const Scalar& a) const { using numext::arg; return arg(a); }
141
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const Scalar& a) const { return numext::arg(a); }
134
142
  template<typename Packet>
135
143
  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a) const
136
144
  { return internal::parg(a); }
@@ -158,6 +166,44 @@ template<typename Scalar, typename NewType>
158
166
  struct functor_traits<scalar_cast_op<Scalar,NewType> >
159
167
  { enum { Cost = is_same<Scalar, NewType>::value ? 0 : NumTraits<NewType>::AddCost, PacketAccess = false }; };
160
168
 
169
+ /** \internal
170
+ * \brief Template functor to arithmetically shift a scalar right by a number of bits
171
+ *
172
+ * \sa class CwiseUnaryOp, MatrixBase::shift_right()
173
+ */
174
+ template<typename Scalar, int N>
175
+ struct scalar_shift_right_op {
176
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_shift_right_op)
177
+
178
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Scalar operator() (const Scalar& a) const
179
+ { return a >> N; }
180
+ template<typename Packet>
181
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a) const
182
+ { return internal::parithmetic_shift_right<N>(a); }
183
+ };
184
+ template<typename Scalar, int N>
185
+ struct functor_traits<scalar_shift_right_op<Scalar,N> >
186
+ { enum { Cost = NumTraits<Scalar>::AddCost, PacketAccess = packet_traits<Scalar>::HasShift }; };
187
+
188
+ /** \internal
189
+ * \brief Template functor to logically shift a scalar left by a number of bits
190
+ *
191
+ * \sa class CwiseUnaryOp, MatrixBase::shift_left()
192
+ */
193
+ template<typename Scalar, int N>
194
+ struct scalar_shift_left_op {
195
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_shift_left_op)
196
+
197
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Scalar operator() (const Scalar& a) const
198
+ { return a << N; }
199
+ template<typename Packet>
200
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Packet packetOp(const Packet& a) const
201
+ { return internal::plogical_shift_left<N>(a); }
202
+ };
203
+ template<typename Scalar, int N>
204
+ struct functor_traits<scalar_shift_left_op<Scalar,N> >
205
+ { enum { Cost = NumTraits<Scalar>::AddCost, PacketAccess = packet_traits<Scalar>::HasShift }; };
206
+
161
207
  /** \internal
162
208
  * \brief Template functor to extract the real part of a complex
163
209
  *
@@ -262,6 +308,26 @@ struct functor_traits<scalar_exp_op<Scalar> > {
262
308
  };
263
309
  };
264
310
 
311
+ /** \internal
312
+ *
313
+ * \brief Template functor to compute the exponential of a scalar - 1.
314
+ *
315
+ * \sa class CwiseUnaryOp, ArrayBase::expm1()
316
+ */
317
+ template<typename Scalar> struct scalar_expm1_op {
318
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_expm1_op)
319
+ EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const { return numext::expm1(a); }
320
+ template <typename Packet>
321
+ EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::pexpm1(a); }
322
+ };
323
+ template <typename Scalar>
324
+ struct functor_traits<scalar_expm1_op<Scalar> > {
325
+ enum {
326
+ PacketAccess = packet_traits<Scalar>::HasExpm1,
327
+ Cost = functor_traits<scalar_exp_op<Scalar> >::Cost // TODO measure cost of expm1
328
+ };
329
+ };
330
+
265
331
  /** \internal
266
332
  *
267
333
  * \brief Template functor to compute the logarithm of a scalar
@@ -321,7 +387,7 @@ struct functor_traits<scalar_log1p_op<Scalar> > {
321
387
  */
322
388
  template<typename Scalar> struct scalar_log10_op {
323
389
  EIGEN_EMPTY_STRUCT_CTOR(scalar_log10_op)
324
- EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const { EIGEN_USING_STD_MATH(log10) return log10(a); }
390
+ EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const { EIGEN_USING_STD(log10) return log10(a); }
325
391
  template <typename Packet>
326
392
  EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::plog10(a); }
327
393
  };
@@ -329,6 +395,22 @@ template<typename Scalar>
329
395
  struct functor_traits<scalar_log10_op<Scalar> >
330
396
  { enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = packet_traits<Scalar>::HasLog10 }; };
331
397
 
398
+ /** \internal
399
+ *
400
+ * \brief Template functor to compute the base-2 logarithm of a scalar
401
+ *
402
+ * \sa class CwiseUnaryOp, Cwise::log2()
403
+ */
404
+ template<typename Scalar> struct scalar_log2_op {
405
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_log2_op)
406
+ EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const { return Scalar(EIGEN_LOG2E) * numext::log(a); }
407
+ template <typename Packet>
408
+ EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::plog2(a); }
409
+ };
410
+ template<typename Scalar>
411
+ struct functor_traits<scalar_log2_op<Scalar> >
412
+ { enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = packet_traits<Scalar>::HasLog }; };
413
+
332
414
  /** \internal
333
415
  * \brief Template functor to compute the square root of a scalar
334
416
  * \sa class CwiseUnaryOp, Cwise::sqrt()
@@ -356,13 +438,25 @@ struct functor_traits<scalar_sqrt_op<Scalar> > {
356
438
  };
357
439
  };
358
440
 
441
+ // Boolean specialization to eliminate -Wimplicit-conversion-floating-point-to-bool warnings.
442
+ template<> struct scalar_sqrt_op<bool> {
443
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_sqrt_op)
444
+ EIGEN_DEPRECATED EIGEN_DEVICE_FUNC inline bool operator() (const bool& a) const { return a; }
445
+ template <typename Packet>
446
+ EIGEN_DEPRECATED EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return a; }
447
+ };
448
+ template <>
449
+ struct functor_traits<scalar_sqrt_op<bool> > {
450
+ enum { Cost = 1, PacketAccess = packet_traits<bool>::Vectorizable };
451
+ };
452
+
359
453
  /** \internal
360
454
  * \brief Template functor to compute the reciprocal square root of a scalar
361
455
  * \sa class CwiseUnaryOp, Cwise::rsqrt()
362
456
  */
363
457
  template<typename Scalar> struct scalar_rsqrt_op {
364
458
  EIGEN_EMPTY_STRUCT_CTOR(scalar_rsqrt_op)
365
- EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const { return Scalar(1)/numext::sqrt(a); }
459
+ EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const { return numext::rsqrt(a); }
366
460
  template <typename Packet>
367
461
  EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::prsqrt(a); }
368
462
  };
@@ -528,6 +622,23 @@ struct functor_traits<scalar_tanh_op<Scalar> > {
528
622
  };
529
623
  };
530
624
 
625
+ #if EIGEN_HAS_CXX11_MATH
626
+ /** \internal
627
+ * \brief Template functor to compute the atanh of a scalar
628
+ * \sa class CwiseUnaryOp, ArrayBase::atanh()
629
+ */
630
+ template <typename Scalar>
631
+ struct scalar_atanh_op {
632
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_atanh_op)
633
+ EIGEN_DEVICE_FUNC inline const Scalar operator()(const Scalar& a) const { return numext::atanh(a); }
634
+ };
635
+
636
+ template <typename Scalar>
637
+ struct functor_traits<scalar_atanh_op<Scalar> > {
638
+ enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = false };
639
+ };
640
+ #endif
641
+
531
642
  /** \internal
532
643
  * \brief Template functor to compute the sinh of a scalar
533
644
  * \sa class CwiseUnaryOp, ArrayBase::sinh()
@@ -547,6 +658,23 @@ struct functor_traits<scalar_sinh_op<Scalar> >
547
658
  };
548
659
  };
549
660
 
661
+ #if EIGEN_HAS_CXX11_MATH
662
+ /** \internal
663
+ * \brief Template functor to compute the asinh of a scalar
664
+ * \sa class CwiseUnaryOp, ArrayBase::asinh()
665
+ */
666
+ template <typename Scalar>
667
+ struct scalar_asinh_op {
668
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_asinh_op)
669
+ EIGEN_DEVICE_FUNC inline const Scalar operator()(const Scalar& a) const { return numext::asinh(a); }
670
+ };
671
+
672
+ template <typename Scalar>
673
+ struct functor_traits<scalar_asinh_op<Scalar> > {
674
+ enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = false };
675
+ };
676
+ #endif
677
+
550
678
  /** \internal
551
679
  * \brief Template functor to compute the cosh of a scalar
552
680
  * \sa class CwiseUnaryOp, ArrayBase::cosh()
@@ -566,6 +694,23 @@ struct functor_traits<scalar_cosh_op<Scalar> >
566
694
  };
567
695
  };
568
696
 
697
+ #if EIGEN_HAS_CXX11_MATH
698
+ /** \internal
699
+ * \brief Template functor to compute the acosh of a scalar
700
+ * \sa class CwiseUnaryOp, ArrayBase::acosh()
701
+ */
702
+ template <typename Scalar>
703
+ struct scalar_acosh_op {
704
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_acosh_op)
705
+ EIGEN_DEVICE_FUNC inline const Scalar operator()(const Scalar& a) const { return numext::acosh(a); }
706
+ };
707
+
708
+ template <typename Scalar>
709
+ struct functor_traits<scalar_acosh_op<Scalar> > {
710
+ enum { Cost = 5 * NumTraits<Scalar>::MulCost, PacketAccess = false };
711
+ };
712
+ #endif
713
+
569
714
  /** \internal
570
715
  * \brief Template functor to compute the inverse of a scalar
571
716
  * \sa class CwiseUnaryOp, Cwise::inverse()
@@ -578,9 +723,13 @@ struct scalar_inverse_op {
578
723
  EIGEN_DEVICE_FUNC inline const Packet packetOp(const Packet& a) const
579
724
  { return internal::pdiv(pset1<Packet>(Scalar(1)),a); }
580
725
  };
581
- template<typename Scalar>
582
- struct functor_traits<scalar_inverse_op<Scalar> >
583
- { enum { Cost = NumTraits<Scalar>::MulCost, PacketAccess = packet_traits<Scalar>::HasDiv }; };
726
+ template <typename Scalar>
727
+ struct functor_traits<scalar_inverse_op<Scalar> > {
728
+ enum {
729
+ PacketAccess = packet_traits<Scalar>::HasDiv,
730
+ Cost = scalar_div_cost<Scalar, PacketAccess>::value
731
+ };
732
+ };
584
733
 
585
734
  /** \internal
586
735
  * \brief Template functor to compute the square of a scalar
@@ -598,6 +747,19 @@ template<typename Scalar>
598
747
  struct functor_traits<scalar_square_op<Scalar> >
599
748
  { enum { Cost = NumTraits<Scalar>::MulCost, PacketAccess = packet_traits<Scalar>::HasMul }; };
600
749
 
750
+ // Boolean specialization to avoid -Wint-in-bool-context warnings on GCC.
751
+ template<>
752
+ struct scalar_square_op<bool> {
753
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_square_op)
754
+ EIGEN_DEPRECATED EIGEN_DEVICE_FUNC inline bool operator() (const bool& a) const { return a; }
755
+ template<typename Packet>
756
+ EIGEN_DEPRECATED EIGEN_DEVICE_FUNC inline const Packet packetOp(const Packet& a) const
757
+ { return a; }
758
+ };
759
+ template<>
760
+ struct functor_traits<scalar_square_op<bool> >
761
+ { enum { Cost = 0, PacketAccess = packet_traits<bool>::Vectorizable }; };
762
+
601
763
  /** \internal
602
764
  * \brief Template functor to compute the cube of a scalar
603
765
  * \sa class CwiseUnaryOp, Cwise::cube()
@@ -614,6 +776,19 @@ template<typename Scalar>
614
776
  struct functor_traits<scalar_cube_op<Scalar> >
615
777
  { enum { Cost = 2*NumTraits<Scalar>::MulCost, PacketAccess = packet_traits<Scalar>::HasMul }; };
616
778
 
779
+ // Boolean specialization to avoid -Wint-in-bool-context warnings on GCC.
780
+ template<>
781
+ struct scalar_cube_op<bool> {
782
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_cube_op)
783
+ EIGEN_DEPRECATED EIGEN_DEVICE_FUNC inline bool operator() (const bool& a) const { return a; }
784
+ template<typename Packet>
785
+ EIGEN_DEPRECATED EIGEN_DEVICE_FUNC inline const Packet packetOp(const Packet& a) const
786
+ { return a; }
787
+ };
788
+ template<>
789
+ struct functor_traits<scalar_cube_op<bool> >
790
+ { enum { Cost = 0, PacketAccess = packet_traits<bool>::Vectorizable }; };
791
+
617
792
  /** \internal
618
793
  * \brief Template functor to compute the rounded value of a scalar
619
794
  * \sa class CwiseUnaryOp, ArrayBase::round()
@@ -652,6 +827,25 @@ struct functor_traits<scalar_floor_op<Scalar> >
652
827
  };
653
828
  };
654
829
 
830
+ /** \internal
831
+ * \brief Template functor to compute the rounded (with current rounding mode) value of a scalar
832
+ * \sa class CwiseUnaryOp, ArrayBase::rint()
833
+ */
834
+ template<typename Scalar> struct scalar_rint_op {
835
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_rint_op)
836
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const Scalar operator() (const Scalar& a) const { return numext::rint(a); }
837
+ template <typename Packet>
838
+ EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::print(a); }
839
+ };
840
+ template<typename Scalar>
841
+ struct functor_traits<scalar_rint_op<Scalar> >
842
+ {
843
+ enum {
844
+ Cost = NumTraits<Scalar>::MulCost,
845
+ PacketAccess = packet_traits<Scalar>::HasRint
846
+ };
847
+ };
848
+
655
849
  /** \internal
656
850
  * \brief Template functor to compute the ceil of a scalar
657
851
  * \sa class CwiseUnaryOp, ArrayBase::ceil()
@@ -678,7 +872,13 @@ struct functor_traits<scalar_ceil_op<Scalar> >
678
872
  template<typename Scalar> struct scalar_isnan_op {
679
873
  EIGEN_EMPTY_STRUCT_CTOR(scalar_isnan_op)
680
874
  typedef bool result_type;
681
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const Scalar& a) const { return (numext::isnan)(a); }
875
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const Scalar& a) const {
876
+ #if defined(SYCL_DEVICE_ONLY)
877
+ return numext::isnan(a);
878
+ #else
879
+ return (numext::isnan)(a);
880
+ #endif
881
+ }
682
882
  };
683
883
  template<typename Scalar>
684
884
  struct functor_traits<scalar_isnan_op<Scalar> >
@@ -696,7 +896,13 @@ struct functor_traits<scalar_isnan_op<Scalar> >
696
896
  template<typename Scalar> struct scalar_isinf_op {
697
897
  EIGEN_EMPTY_STRUCT_CTOR(scalar_isinf_op)
698
898
  typedef bool result_type;
699
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const Scalar& a) const { return (numext::isinf)(a); }
899
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const Scalar& a) const {
900
+ #if defined(SYCL_DEVICE_ONLY)
901
+ return numext::isinf(a);
902
+ #else
903
+ return (numext::isinf)(a);
904
+ #endif
905
+ }
700
906
  };
701
907
  template<typename Scalar>
702
908
  struct functor_traits<scalar_isinf_op<Scalar> >
@@ -714,7 +920,13 @@ struct functor_traits<scalar_isinf_op<Scalar> >
714
920
  template<typename Scalar> struct scalar_isfinite_op {
715
921
  EIGEN_EMPTY_STRUCT_CTOR(scalar_isfinite_op)
716
922
  typedef bool result_type;
717
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const Scalar& a) const { return (numext::isfinite)(a); }
923
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE result_type operator() (const Scalar& a) const {
924
+ #if defined(SYCL_DEVICE_ONLY)
925
+ return numext::isfinite(a);
926
+ #else
927
+ return (numext::isfinite)(a);
928
+ #endif
929
+ }
718
930
  };
719
931
  template<typename Scalar>
720
932
  struct functor_traits<scalar_isfinite_op<Scalar> >
@@ -746,9 +958,9 @@ struct functor_traits<scalar_boolean_not_op<Scalar> > {
746
958
  * \brief Template functor to compute the signum of a scalar
747
959
  * \sa class CwiseUnaryOp, Cwise::sign()
748
960
  */
749
- template<typename Scalar,bool iscpx=(NumTraits<Scalar>::IsComplex!=0) > struct scalar_sign_op;
961
+ template<typename Scalar,bool is_complex=(NumTraits<Scalar>::IsComplex!=0), bool is_integer=(NumTraits<Scalar>::IsInteger!=0) > struct scalar_sign_op;
750
962
  template<typename Scalar>
751
- struct scalar_sign_op<Scalar,false> {
963
+ struct scalar_sign_op<Scalar, false, true> {
752
964
  EIGEN_EMPTY_STRUCT_CTOR(scalar_sign_op)
753
965
  EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const
754
966
  {
@@ -758,8 +970,21 @@ struct scalar_sign_op<Scalar,false> {
758
970
  //template <typename Packet>
759
971
  //EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::psign(a); }
760
972
  };
973
+
761
974
  template<typename Scalar>
762
- struct scalar_sign_op<Scalar,true> {
975
+ struct scalar_sign_op<Scalar, false, false> {
976
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_sign_op)
977
+ EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const
978
+ {
979
+ return (numext::isnan)(a) ? a : Scalar( (a>Scalar(0)) - (a<Scalar(0)) );
980
+ }
981
+ //TODO
982
+ //template <typename Packet>
983
+ //EIGEN_DEVICE_FUNC inline Packet packetOp(const Packet& a) const { return internal::psign(a); }
984
+ };
985
+
986
+ template<typename Scalar, bool is_integer>
987
+ struct scalar_sign_op<Scalar,true, is_integer> {
763
988
  EIGEN_EMPTY_STRUCT_CTOR(scalar_sign_op)
764
989
  EIGEN_DEVICE_FUNC inline const Scalar operator() (const Scalar& a) const
765
990
  {
@@ -768,7 +993,7 @@ struct scalar_sign_op<Scalar,true> {
768
993
  if (aa==real_type(0))
769
994
  return Scalar(0);
770
995
  aa = real_type(1)/aa;
771
- return Scalar(real(a)*aa, imag(a)*aa );
996
+ return Scalar(a.real()*aa, a.imag()*aa );
772
997
  }
773
998
  //TODO
774
999
  //template <typename Packet>
@@ -777,7 +1002,7 @@ struct scalar_sign_op<Scalar,true> {
777
1002
  template<typename Scalar>
778
1003
  struct functor_traits<scalar_sign_op<Scalar> >
779
1004
  { enum {
780
- Cost =
1005
+ Cost =
781
1006
  NumTraits<Scalar>::IsComplex
782
1007
  ? ( 8*NumTraits<Scalar>::MulCost ) // roughly
783
1008
  : ( 3*NumTraits<Scalar>::AddCost),
@@ -785,6 +1010,120 @@ struct functor_traits<scalar_sign_op<Scalar> >
785
1010
  };
786
1011
  };
787
1012
 
1013
+ /** \internal
1014
+ * \brief Template functor to compute the logistic function of a scalar
1015
+ * \sa class CwiseUnaryOp, ArrayBase::logistic()
1016
+ */
1017
+ template <typename T>
1018
+ struct scalar_logistic_op {
1019
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_logistic_op)
1020
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE T operator()(const T& x) const {
1021
+ return packetOp(x);
1022
+ }
1023
+
1024
+ template <typename Packet> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
1025
+ Packet packetOp(const Packet& x) const {
1026
+ const Packet one = pset1<Packet>(T(1));
1027
+ return pdiv(one, padd(one, pexp(pnegate(x))));
1028
+ }
1029
+ };
1030
+
1031
+ #ifndef EIGEN_GPU_COMPILE_PHASE
1032
+ /** \internal
1033
+ * \brief Template specialization of the logistic function for float.
1034
+ *
1035
+ * Uses just a 9/10-degree rational interpolant which
1036
+ * interpolates 1/(1+exp(-x)) - 0.5 up to a couple of ulps in the range
1037
+ * [-9, 18]. Below -9 we use the more accurate approximation
1038
+ * 1/(1+exp(-x)) ~= exp(x), and above 18 the logistic function is 1 withing
1039
+ * one ulp. The shifted logistic is interpolated because it was easier to
1040
+ * make the fit converge.
1041
+ *
1042
+ */
1043
+ template <>
1044
+ struct scalar_logistic_op<float> {
1045
+ EIGEN_EMPTY_STRUCT_CTOR(scalar_logistic_op)
1046
+ EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float operator()(const float& x) const {
1047
+ return packetOp(x);
1048
+ }
1049
+
1050
+ template <typename Packet> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
1051
+ Packet packetOp(const Packet& _x) const {
1052
+ const Packet cutoff_lower = pset1<Packet>(-9.f);
1053
+ const Packet lt_mask = pcmp_lt<Packet>(_x, cutoff_lower);
1054
+ const bool any_small = predux_any(lt_mask);
1055
+
1056
+ // The upper cut-off is the smallest x for which the rational approximation evaluates to 1.
1057
+ // Choosing this value saves us a few instructions clamping the results at the end.
1058
+ #ifdef EIGEN_VECTORIZE_FMA
1059
+ const Packet cutoff_upper = pset1<Packet>(15.7243833541870117f);
1060
+ #else
1061
+ const Packet cutoff_upper = pset1<Packet>(15.6437711715698242f);
1062
+ #endif
1063
+ const Packet x = pmin(_x, cutoff_upper);
1064
+
1065
+ // The monomial coefficients of the numerator polynomial (odd).
1066
+ const Packet alpha_1 = pset1<Packet>(2.48287947061529e-01f);
1067
+ const Packet alpha_3 = pset1<Packet>(8.51377133304701e-03f);
1068
+ const Packet alpha_5 = pset1<Packet>(6.08574864600143e-05f);
1069
+ const Packet alpha_7 = pset1<Packet>(1.15627324459942e-07f);
1070
+ const Packet alpha_9 = pset1<Packet>(4.37031012579801e-11f);
1071
+
1072
+ // The monomial coefficients of the denominator polynomial (even).
1073
+ const Packet beta_0 = pset1<Packet>(9.93151921023180e-01f);
1074
+ const Packet beta_2 = pset1<Packet>(1.16817656904453e-01f);
1075
+ const Packet beta_4 = pset1<Packet>(1.70198817374094e-03f);
1076
+ const Packet beta_6 = pset1<Packet>(6.29106785017040e-06f);
1077
+ const Packet beta_8 = pset1<Packet>(5.76102136993427e-09f);
1078
+ const Packet beta_10 = pset1<Packet>(6.10247389755681e-13f);
1079
+
1080
+ // Since the polynomials are odd/even, we need x^2.
1081
+ const Packet x2 = pmul(x, x);
1082
+
1083
+ // Evaluate the numerator polynomial p.
1084
+ Packet p = pmadd(x2, alpha_9, alpha_7);
1085
+ p = pmadd(x2, p, alpha_5);
1086
+ p = pmadd(x2, p, alpha_3);
1087
+ p = pmadd(x2, p, alpha_1);
1088
+ p = pmul(x, p);
1089
+
1090
+ // Evaluate the denominator polynomial q.
1091
+ Packet q = pmadd(x2, beta_10, beta_8);
1092
+ q = pmadd(x2, q, beta_6);
1093
+ q = pmadd(x2, q, beta_4);
1094
+ q = pmadd(x2, q, beta_2);
1095
+ q = pmadd(x2, q, beta_0);
1096
+ // Divide the numerator by the denominator and shift it up.
1097
+ const Packet logistic = padd(pdiv(p, q), pset1<Packet>(0.5f));
1098
+ if (EIGEN_PREDICT_FALSE(any_small)) {
1099
+ const Packet exponential = pexp(_x);
1100
+ return pselect(lt_mask, exponential, logistic);
1101
+ } else {
1102
+ return logistic;
1103
+ }
1104
+ }
1105
+ };
1106
+ #endif // #ifndef EIGEN_GPU_COMPILE_PHASE
1107
+
1108
+ template <typename T>
1109
+ struct functor_traits<scalar_logistic_op<T> > {
1110
+ enum {
1111
+ // The cost estimate for float here here is for the common(?) case where
1112
+ // all arguments are greater than -9.
1113
+ Cost = scalar_div_cost<T, packet_traits<T>::HasDiv>::value +
1114
+ (internal::is_same<T, float>::value
1115
+ ? NumTraits<T>::AddCost * 15 + NumTraits<T>::MulCost * 11
1116
+ : NumTraits<T>::AddCost * 2 +
1117
+ functor_traits<scalar_exp_op<T> >::Cost),
1118
+ PacketAccess =
1119
+ packet_traits<T>::HasAdd && packet_traits<T>::HasDiv &&
1120
+ (internal::is_same<T, float>::value
1121
+ ? packet_traits<T>::HasMul && packet_traits<T>::HasMax &&
1122
+ packet_traits<T>::HasMin
1123
+ : packet_traits<T>::HasNegate && packet_traits<T>::HasExp)
1124
+ };
1125
+ };
1126
+
788
1127
  } // end namespace internal
789
1128
 
790
1129
  } // end namespace Eigen