tomoto 0.2.2 → 0.3.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +10 -0
- data/README.md +8 -10
- data/ext/tomoto/ct.cpp +11 -11
- data/ext/tomoto/dmr.cpp +14 -13
- data/ext/tomoto/dt.cpp +14 -14
- data/ext/tomoto/extconf.rb +7 -5
- data/ext/tomoto/gdmr.cpp +7 -7
- data/ext/tomoto/hdp.cpp +9 -9
- data/ext/tomoto/hlda.cpp +13 -13
- data/ext/tomoto/hpa.cpp +5 -5
- data/ext/tomoto/lda.cpp +42 -39
- data/ext/tomoto/llda.cpp +6 -6
- data/ext/tomoto/mglda.cpp +15 -15
- data/ext/tomoto/pa.cpp +6 -6
- data/ext/tomoto/plda.cpp +6 -6
- data/ext/tomoto/slda.cpp +8 -8
- data/ext/tomoto/{ext.cpp → tomoto.cpp} +8 -8
- data/ext/tomoto/utils.h +16 -70
- data/lib/tomoto/version.rb +1 -1
- data/lib/tomoto.rb +5 -1
- data/vendor/EigenRand/EigenRand/Core.h +10 -10
- data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
- data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
- data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
- data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
- data/vendor/EigenRand/EigenRand/EigenRand +11 -6
- data/vendor/EigenRand/EigenRand/Macro.h +13 -7
- data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
- data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
- data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
- data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
- data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
- data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
- data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
- data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
- data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
- data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
- data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
- data/vendor/EigenRand/EigenRand/doc.h +24 -12
- data/vendor/EigenRand/README.md +57 -4
- data/vendor/eigen/COPYING.APACHE +203 -0
- data/vendor/eigen/COPYING.BSD +1 -1
- data/vendor/eigen/COPYING.MINPACK +51 -52
- data/vendor/eigen/Eigen/Cholesky +0 -1
- data/vendor/eigen/Eigen/Core +112 -265
- data/vendor/eigen/Eigen/Eigenvalues +2 -3
- data/vendor/eigen/Eigen/Geometry +5 -8
- data/vendor/eigen/Eigen/Householder +0 -1
- data/vendor/eigen/Eigen/Jacobi +0 -1
- data/vendor/eigen/Eigen/KLUSupport +41 -0
- data/vendor/eigen/Eigen/LU +2 -5
- data/vendor/eigen/Eigen/OrderingMethods +0 -3
- data/vendor/eigen/Eigen/PaStiXSupport +1 -0
- data/vendor/eigen/Eigen/PardisoSupport +0 -0
- data/vendor/eigen/Eigen/QR +2 -3
- data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
- data/vendor/eigen/Eigen/SVD +0 -1
- data/vendor/eigen/Eigen/Sparse +0 -2
- data/vendor/eigen/Eigen/SparseCholesky +0 -8
- data/vendor/eigen/Eigen/SparseLU +4 -0
- data/vendor/eigen/Eigen/SparseQR +0 -1
- data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
- data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
- data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
- data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
- data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
- data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
- data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
- data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
- data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
- data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
- data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
- data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
- data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
- data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
- data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
- data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
- data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
- data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
- data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
- data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
- data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
- data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
- data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
- data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
- data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
- data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
- data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
- data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
- data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
- data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
- data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
- data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
- data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
- data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
- data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
- data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
- data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
- data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
- data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
- data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
- data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
- data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
- data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
- data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
- data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
- data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
- data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
- data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
- data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
- data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
- data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
- data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
- data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
- data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
- data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
- data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
- data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
- data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
- data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
- data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
- data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
- data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
- data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
- data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
- data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
- data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
- data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
- data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
- data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
- data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
- data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
- data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
- data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
- data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
- data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
- data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
- data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
- data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
- data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
- data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
- data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
- data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
- data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
- data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
- data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
- data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
- data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
- data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
- data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
- data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
- data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
- data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
- data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
- data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
- data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
- data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
- data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
- data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
- data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
- data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
- data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
- data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
- data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
- data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
- data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
- data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
- data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
- data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
- data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
- data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
- data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
- data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
- data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
- data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
- data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
- data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
- data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
- data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
- data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
- data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
- data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
- data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
- data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
- data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
- data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
- data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
- data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
- data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
- data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
- data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
- data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
- data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
- data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
- data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
- data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
- data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
- data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
- data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
- data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
- data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
- data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
- data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
- data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
- data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
- data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
- data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
- data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
- data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
- data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
- data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
- data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
- data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
- data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
- data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
- data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
- data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
- data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
- data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
- data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
- data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
- data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
- data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
- data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
- data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
- data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
- data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
- data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
- data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
- data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
- data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
- data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
- data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
- data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
- data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
- data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
- data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
- data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
- data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
- data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
- data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
- data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
- data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
- data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
- data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
- data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
- data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
- data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
- data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
- data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
- data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
- data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
- data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
- data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
- data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
- data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
- data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
- data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
- data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
- data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
- data/vendor/eigen/README.md +2 -0
- data/vendor/eigen/bench/btl/README +1 -1
- data/vendor/eigen/bench/tensors/README +6 -7
- data/vendor/eigen/ci/README.md +56 -0
- data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
- data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
- data/vendor/eigen/unsupported/README.txt +1 -1
- data/vendor/tomotopy/README.kr.rst +78 -0
- data/vendor/tomotopy/README.rst +75 -0
- data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
- data/vendor/tomotopy/src/Labeling/Phraser.hpp +4 -4
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +7 -3
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +7 -3
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
- data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +57 -6
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +3 -2
- data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +5 -5
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +50 -19
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +6 -2
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +3 -2
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +6 -2
- data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
- data/vendor/tomotopy/src/TopicModel/PTModel.hpp +36 -3
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +6 -3
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +55 -26
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
- data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
- data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
- data/vendor/tomotopy/src/Utils/exception.h +6 -0
- data/vendor/tomotopy/src/Utils/math.h +2 -2
- data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
- data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
- data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
- metadata +64 -18
- data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
- data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
- data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
- data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2008-2017 Gael Guennebaud <gael.guennebaud@inria.fr>
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// Copyright (C) 2014 yoco <peter.xiau@gmail.com>
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_RESHAPED_H
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#define EIGEN_RESHAPED_H
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namespace Eigen {
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/** \class Reshaped
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* \ingroup Core_Module
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*
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* \brief Expression of a fixed-size or dynamic-size reshape
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*
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* \tparam XprType the type of the expression in which we are taking a reshape
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* \tparam Rows the number of rows of the reshape we are taking at compile time (optional)
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* \tparam Cols the number of columns of the reshape we are taking at compile time (optional)
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* \tparam Order can be ColMajor or RowMajor, default is ColMajor.
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*
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* This class represents an expression of either a fixed-size or dynamic-size reshape.
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* It is the return type of DenseBase::reshaped(NRowsType,NColsType) and
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* most of the time this is the only way it is used.
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*
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* However, in C++98, if you want to directly maniputate reshaped expressions,
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* for instance if you want to write a function returning such an expression, you
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* will need to use this class. In C++11, it is advised to use the \em auto
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* keyword for such use cases.
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*
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* Here is an example illustrating the dynamic case:
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* \include class_Reshaped.cpp
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* Output: \verbinclude class_Reshaped.out
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*
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* Here is an example illustrating the fixed-size case:
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* \include class_FixedReshaped.cpp
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* Output: \verbinclude class_FixedReshaped.out
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*
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* \sa DenseBase::reshaped(NRowsType,NColsType)
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*/
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namespace internal {
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template<typename XprType, int Rows, int Cols, int Order>
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struct traits<Reshaped<XprType, Rows, Cols, Order> > : traits<XprType>
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{
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typedef typename traits<XprType>::Scalar Scalar;
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typedef typename traits<XprType>::StorageKind StorageKind;
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typedef typename traits<XprType>::XprKind XprKind;
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enum{
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MatrixRows = traits<XprType>::RowsAtCompileTime,
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MatrixCols = traits<XprType>::ColsAtCompileTime,
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RowsAtCompileTime = Rows,
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ColsAtCompileTime = Cols,
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MaxRowsAtCompileTime = Rows,
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MaxColsAtCompileTime = Cols,
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XpxStorageOrder = ((int(traits<XprType>::Flags) & RowMajorBit) == RowMajorBit) ? RowMajor : ColMajor,
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ReshapedStorageOrder = (RowsAtCompileTime == 1 && ColsAtCompileTime != 1) ? RowMajor
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: (ColsAtCompileTime == 1 && RowsAtCompileTime != 1) ? ColMajor
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: XpxStorageOrder,
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HasSameStorageOrderAsXprType = (ReshapedStorageOrder == XpxStorageOrder),
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InnerSize = (ReshapedStorageOrder==int(RowMajor)) ? int(ColsAtCompileTime) : int(RowsAtCompileTime),
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InnerStrideAtCompileTime = HasSameStorageOrderAsXprType
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? int(inner_stride_at_compile_time<XprType>::ret)
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: Dynamic,
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OuterStrideAtCompileTime = Dynamic,
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HasDirectAccess = internal::has_direct_access<XprType>::ret
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&& (Order==int(XpxStorageOrder))
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&& ((evaluator<XprType>::Flags&LinearAccessBit)==LinearAccessBit),
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MaskPacketAccessBit = (InnerSize == Dynamic || (InnerSize % packet_traits<Scalar>::size) == 0)
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&& (InnerStrideAtCompileTime == 1)
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? PacketAccessBit : 0,
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//MaskAlignedBit = ((OuterStrideAtCompileTime!=Dynamic) && (((OuterStrideAtCompileTime * int(sizeof(Scalar))) % 16) == 0)) ? AlignedBit : 0,
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FlagsLinearAccessBit = (RowsAtCompileTime == 1 || ColsAtCompileTime == 1) ? LinearAccessBit : 0,
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FlagsLvalueBit = is_lvalue<XprType>::value ? LvalueBit : 0,
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FlagsRowMajorBit = (ReshapedStorageOrder==int(RowMajor)) ? RowMajorBit : 0,
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FlagsDirectAccessBit = HasDirectAccess ? DirectAccessBit : 0,
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Flags0 = traits<XprType>::Flags & ( (HereditaryBits & ~RowMajorBit) | MaskPacketAccessBit),
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Flags = (Flags0 | FlagsLinearAccessBit | FlagsLvalueBit | FlagsRowMajorBit | FlagsDirectAccessBit)
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};
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};
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template<typename XprType, int Rows, int Cols, int Order, bool HasDirectAccess> class ReshapedImpl_dense;
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} // end namespace internal
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template<typename XprType, int Rows, int Cols, int Order, typename StorageKind> class ReshapedImpl;
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template<typename XprType, int Rows, int Cols, int Order> class Reshaped
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: public ReshapedImpl<XprType, Rows, Cols, Order, typename internal::traits<XprType>::StorageKind>
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{
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typedef ReshapedImpl<XprType, Rows, Cols, Order, typename internal::traits<XprType>::StorageKind> Impl;
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public:
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//typedef typename Impl::Base Base;
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typedef Impl Base;
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EIGEN_GENERIC_PUBLIC_INTERFACE(Reshaped)
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EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Reshaped)
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/** Fixed-size constructor
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*/
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EIGEN_DEVICE_FUNC
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inline Reshaped(XprType& xpr)
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: Impl(xpr)
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{
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EIGEN_STATIC_ASSERT(RowsAtCompileTime!=Dynamic && ColsAtCompileTime!=Dynamic,THIS_METHOD_IS_ONLY_FOR_FIXED_SIZE)
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eigen_assert(Rows * Cols == xpr.rows() * xpr.cols());
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}
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/** Dynamic-size constructor
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*/
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EIGEN_DEVICE_FUNC
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inline Reshaped(XprType& xpr,
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Index reshapeRows, Index reshapeCols)
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: Impl(xpr, reshapeRows, reshapeCols)
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{
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eigen_assert((RowsAtCompileTime==Dynamic || RowsAtCompileTime==reshapeRows)
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&& (ColsAtCompileTime==Dynamic || ColsAtCompileTime==reshapeCols));
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eigen_assert(reshapeRows * reshapeCols == xpr.rows() * xpr.cols());
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}
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};
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// The generic default implementation for dense reshape simply forward to the internal::ReshapedImpl_dense
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// that must be specialized for direct and non-direct access...
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template<typename XprType, int Rows, int Cols, int Order>
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class ReshapedImpl<XprType, Rows, Cols, Order, Dense>
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: public internal::ReshapedImpl_dense<XprType, Rows, Cols, Order,internal::traits<Reshaped<XprType,Rows,Cols,Order> >::HasDirectAccess>
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{
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typedef internal::ReshapedImpl_dense<XprType, Rows, Cols, Order,internal::traits<Reshaped<XprType,Rows,Cols,Order> >::HasDirectAccess> Impl;
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public:
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typedef Impl Base;
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EIGEN_INHERIT_ASSIGNMENT_OPERATORS(ReshapedImpl)
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EIGEN_DEVICE_FUNC inline ReshapedImpl(XprType& xpr) : Impl(xpr) {}
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EIGEN_DEVICE_FUNC inline ReshapedImpl(XprType& xpr, Index reshapeRows, Index reshapeCols)
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: Impl(xpr, reshapeRows, reshapeCols) {}
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};
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namespace internal {
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/** \internal Internal implementation of dense Reshaped in the general case. */
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template<typename XprType, int Rows, int Cols, int Order>
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class ReshapedImpl_dense<XprType,Rows,Cols,Order,false>
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: public internal::dense_xpr_base<Reshaped<XprType, Rows, Cols, Order> >::type
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{
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typedef Reshaped<XprType, Rows, Cols, Order> ReshapedType;
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public:
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typedef typename internal::dense_xpr_base<ReshapedType>::type Base;
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EIGEN_DENSE_PUBLIC_INTERFACE(ReshapedType)
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EIGEN_INHERIT_ASSIGNMENT_OPERATORS(ReshapedImpl_dense)
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typedef typename internal::ref_selector<XprType>::non_const_type MatrixTypeNested;
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typedef typename internal::remove_all<XprType>::type NestedExpression;
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class InnerIterator;
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/** Fixed-size constructor
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*/
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EIGEN_DEVICE_FUNC
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inline ReshapedImpl_dense(XprType& xpr)
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: m_xpr(xpr), m_rows(Rows), m_cols(Cols)
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{}
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/** Dynamic-size constructor
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*/
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EIGEN_DEVICE_FUNC
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inline ReshapedImpl_dense(XprType& xpr, Index nRows, Index nCols)
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: m_xpr(xpr), m_rows(nRows), m_cols(nCols)
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{}
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EIGEN_DEVICE_FUNC Index rows() const { return m_rows; }
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EIGEN_DEVICE_FUNC Index cols() const { return m_cols; }
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#ifdef EIGEN_PARSED_BY_DOXYGEN
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/** \sa MapBase::data() */
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EIGEN_DEVICE_FUNC inline const Scalar* data() const;
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EIGEN_DEVICE_FUNC inline Index innerStride() const;
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EIGEN_DEVICE_FUNC inline Index outerStride() const;
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#endif
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/** \returns the nested expression */
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EIGEN_DEVICE_FUNC
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const typename internal::remove_all<XprType>::type&
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nestedExpression() const { return m_xpr; }
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/** \returns the nested expression */
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EIGEN_DEVICE_FUNC
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typename internal::remove_reference<XprType>::type&
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nestedExpression() { return m_xpr; }
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protected:
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MatrixTypeNested m_xpr;
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const internal::variable_if_dynamic<Index, Rows> m_rows;
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const internal::variable_if_dynamic<Index, Cols> m_cols;
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};
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/** \internal Internal implementation of dense Reshaped in the direct access case. */
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template<typename XprType, int Rows, int Cols, int Order>
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class ReshapedImpl_dense<XprType, Rows, Cols, Order, true>
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: public MapBase<Reshaped<XprType, Rows, Cols, Order> >
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{
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typedef Reshaped<XprType, Rows, Cols, Order> ReshapedType;
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typedef typename internal::ref_selector<XprType>::non_const_type XprTypeNested;
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public:
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typedef MapBase<ReshapedType> Base;
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EIGEN_DENSE_PUBLIC_INTERFACE(ReshapedType)
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EIGEN_INHERIT_ASSIGNMENT_OPERATORS(ReshapedImpl_dense)
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/** Fixed-size constructor
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*/
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EIGEN_DEVICE_FUNC
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inline ReshapedImpl_dense(XprType& xpr)
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: Base(xpr.data()), m_xpr(xpr)
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{}
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/** Dynamic-size constructor
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*/
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EIGEN_DEVICE_FUNC
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inline ReshapedImpl_dense(XprType& xpr, Index nRows, Index nCols)
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: Base(xpr.data(), nRows, nCols),
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m_xpr(xpr)
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{}
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EIGEN_DEVICE_FUNC
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const typename internal::remove_all<XprTypeNested>::type& nestedExpression() const
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{
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return m_xpr;
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}
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EIGEN_DEVICE_FUNC
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XprType& nestedExpression() { return m_xpr; }
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/** \sa MapBase::innerStride() */
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EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
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inline Index innerStride() const
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{
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return m_xpr.innerStride();
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}
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/** \sa MapBase::outerStride() */
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EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
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inline Index outerStride() const
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{
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return ((Flags&RowMajorBit)==RowMajorBit) ? this->cols() : this->rows();
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}
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protected:
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XprTypeNested m_xpr;
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};
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// Evaluators
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template<typename ArgType, int Rows, int Cols, int Order, bool HasDirectAccess> struct reshaped_evaluator;
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template<typename ArgType, int Rows, int Cols, int Order>
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struct evaluator<Reshaped<ArgType, Rows, Cols, Order> >
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: reshaped_evaluator<ArgType, Rows, Cols, Order, traits<Reshaped<ArgType,Rows,Cols,Order> >::HasDirectAccess>
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{
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typedef Reshaped<ArgType, Rows, Cols, Order> XprType;
|
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typedef typename XprType::Scalar Scalar;
|
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// TODO: should check for smaller packet types
|
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+
typedef typename packet_traits<Scalar>::type PacketScalar;
|
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+
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+
enum {
|
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CoeffReadCost = evaluator<ArgType>::CoeffReadCost,
|
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HasDirectAccess = traits<XprType>::HasDirectAccess,
|
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+
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// RowsAtCompileTime = traits<XprType>::RowsAtCompileTime,
|
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// ColsAtCompileTime = traits<XprType>::ColsAtCompileTime,
|
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// MaxRowsAtCompileTime = traits<XprType>::MaxRowsAtCompileTime,
|
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// MaxColsAtCompileTime = traits<XprType>::MaxColsAtCompileTime,
|
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//
|
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// InnerStrideAtCompileTime = traits<XprType>::HasSameStorageOrderAsXprType
|
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// ? int(inner_stride_at_compile_time<ArgType>::ret)
|
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|
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// : Dynamic,
|
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// OuterStrideAtCompileTime = Dynamic,
|
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+
|
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|
+
FlagsLinearAccessBit = (traits<XprType>::RowsAtCompileTime == 1 || traits<XprType>::ColsAtCompileTime == 1 || HasDirectAccess) ? LinearAccessBit : 0,
|
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+
FlagsRowMajorBit = (traits<XprType>::ReshapedStorageOrder==int(RowMajor)) ? RowMajorBit : 0,
|
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|
+
FlagsDirectAccessBit = HasDirectAccess ? DirectAccessBit : 0,
|
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|
+
Flags0 = evaluator<ArgType>::Flags & (HereditaryBits & ~RowMajorBit),
|
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|
+
Flags = Flags0 | FlagsLinearAccessBit | FlagsRowMajorBit | FlagsDirectAccessBit,
|
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+
|
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+
PacketAlignment = unpacket_traits<PacketScalar>::alignment,
|
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+
Alignment = evaluator<ArgType>::Alignment
|
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+
};
|
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|
+
typedef reshaped_evaluator<ArgType, Rows, Cols, Order, HasDirectAccess> reshaped_evaluator_type;
|
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|
+
EIGEN_DEVICE_FUNC explicit evaluator(const XprType& xpr) : reshaped_evaluator_type(xpr)
|
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|
+
{
|
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|
+
EIGEN_INTERNAL_CHECK_COST_VALUE(CoeffReadCost);
|
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+
}
|
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+
};
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+
|
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+
template<typename ArgType, int Rows, int Cols, int Order>
|
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+
struct reshaped_evaluator<ArgType, Rows, Cols, Order, /* HasDirectAccess */ false>
|
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+
: evaluator_base<Reshaped<ArgType, Rows, Cols, Order> >
|
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+
{
|
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+
typedef Reshaped<ArgType, Rows, Cols, Order> XprType;
|
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+
|
309
|
+
enum {
|
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|
+
CoeffReadCost = evaluator<ArgType>::CoeffReadCost /* TODO + cost of index computations */,
|
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|
+
|
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|
+
Flags = (evaluator<ArgType>::Flags & (HereditaryBits /*| LinearAccessBit | DirectAccessBit*/)),
|
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|
+
|
314
|
+
Alignment = 0
|
315
|
+
};
|
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+
|
317
|
+
EIGEN_DEVICE_FUNC explicit reshaped_evaluator(const XprType& xpr) : m_argImpl(xpr.nestedExpression()), m_xpr(xpr)
|
318
|
+
{
|
319
|
+
EIGEN_INTERNAL_CHECK_COST_VALUE(CoeffReadCost);
|
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|
+
}
|
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|
+
|
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+
typedef typename XprType::Scalar Scalar;
|
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|
+
typedef typename XprType::CoeffReturnType CoeffReturnType;
|
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|
+
|
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|
+
typedef std::pair<Index, Index> RowCol;
|
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|
+
|
327
|
+
inline RowCol index_remap(Index rowId, Index colId) const
|
328
|
+
{
|
329
|
+
if(Order==ColMajor)
|
330
|
+
{
|
331
|
+
const Index nth_elem_idx = colId * m_xpr.rows() + rowId;
|
332
|
+
return RowCol(nth_elem_idx % m_xpr.nestedExpression().rows(),
|
333
|
+
nth_elem_idx / m_xpr.nestedExpression().rows());
|
334
|
+
}
|
335
|
+
else
|
336
|
+
{
|
337
|
+
const Index nth_elem_idx = colId + rowId * m_xpr.cols();
|
338
|
+
return RowCol(nth_elem_idx / m_xpr.nestedExpression().cols(),
|
339
|
+
nth_elem_idx % m_xpr.nestedExpression().cols());
|
340
|
+
}
|
341
|
+
}
|
342
|
+
|
343
|
+
EIGEN_DEVICE_FUNC
|
344
|
+
inline Scalar& coeffRef(Index rowId, Index colId)
|
345
|
+
{
|
346
|
+
EIGEN_STATIC_ASSERT_LVALUE(XprType)
|
347
|
+
const RowCol row_col = index_remap(rowId, colId);
|
348
|
+
return m_argImpl.coeffRef(row_col.first, row_col.second);
|
349
|
+
}
|
350
|
+
|
351
|
+
EIGEN_DEVICE_FUNC
|
352
|
+
inline const Scalar& coeffRef(Index rowId, Index colId) const
|
353
|
+
{
|
354
|
+
const RowCol row_col = index_remap(rowId, colId);
|
355
|
+
return m_argImpl.coeffRef(row_col.first, row_col.second);
|
356
|
+
}
|
357
|
+
|
358
|
+
EIGEN_DEVICE_FUNC
|
359
|
+
EIGEN_STRONG_INLINE const CoeffReturnType coeff(Index rowId, Index colId) const
|
360
|
+
{
|
361
|
+
const RowCol row_col = index_remap(rowId, colId);
|
362
|
+
return m_argImpl.coeff(row_col.first, row_col.second);
|
363
|
+
}
|
364
|
+
|
365
|
+
EIGEN_DEVICE_FUNC
|
366
|
+
inline Scalar& coeffRef(Index index)
|
367
|
+
{
|
368
|
+
EIGEN_STATIC_ASSERT_LVALUE(XprType)
|
369
|
+
const RowCol row_col = index_remap(Rows == 1 ? 0 : index,
|
370
|
+
Rows == 1 ? index : 0);
|
371
|
+
return m_argImpl.coeffRef(row_col.first, row_col.second);
|
372
|
+
|
373
|
+
}
|
374
|
+
|
375
|
+
EIGEN_DEVICE_FUNC
|
376
|
+
inline const Scalar& coeffRef(Index index) const
|
377
|
+
{
|
378
|
+
const RowCol row_col = index_remap(Rows == 1 ? 0 : index,
|
379
|
+
Rows == 1 ? index : 0);
|
380
|
+
return m_argImpl.coeffRef(row_col.first, row_col.second);
|
381
|
+
}
|
382
|
+
|
383
|
+
EIGEN_DEVICE_FUNC
|
384
|
+
inline const CoeffReturnType coeff(Index index) const
|
385
|
+
{
|
386
|
+
const RowCol row_col = index_remap(Rows == 1 ? 0 : index,
|
387
|
+
Rows == 1 ? index : 0);
|
388
|
+
return m_argImpl.coeff(row_col.first, row_col.second);
|
389
|
+
}
|
390
|
+
#if 0
|
391
|
+
EIGEN_DEVICE_FUNC
|
392
|
+
template<int LoadMode>
|
393
|
+
inline PacketScalar packet(Index rowId, Index colId) const
|
394
|
+
{
|
395
|
+
const RowCol row_col = index_remap(rowId, colId);
|
396
|
+
return m_argImpl.template packet<Unaligned>(row_col.first, row_col.second);
|
397
|
+
|
398
|
+
}
|
399
|
+
|
400
|
+
template<int LoadMode>
|
401
|
+
EIGEN_DEVICE_FUNC
|
402
|
+
inline void writePacket(Index rowId, Index colId, const PacketScalar& val)
|
403
|
+
{
|
404
|
+
const RowCol row_col = index_remap(rowId, colId);
|
405
|
+
m_argImpl.const_cast_derived().template writePacket<Unaligned>
|
406
|
+
(row_col.first, row_col.second, val);
|
407
|
+
}
|
408
|
+
|
409
|
+
template<int LoadMode>
|
410
|
+
EIGEN_DEVICE_FUNC
|
411
|
+
inline PacketScalar packet(Index index) const
|
412
|
+
{
|
413
|
+
const RowCol row_col = index_remap(RowsAtCompileTime == 1 ? 0 : index,
|
414
|
+
RowsAtCompileTime == 1 ? index : 0);
|
415
|
+
return m_argImpl.template packet<Unaligned>(row_col.first, row_col.second);
|
416
|
+
}
|
417
|
+
|
418
|
+
template<int LoadMode>
|
419
|
+
EIGEN_DEVICE_FUNC
|
420
|
+
inline void writePacket(Index index, const PacketScalar& val)
|
421
|
+
{
|
422
|
+
const RowCol row_col = index_remap(RowsAtCompileTime == 1 ? 0 : index,
|
423
|
+
RowsAtCompileTime == 1 ? index : 0);
|
424
|
+
return m_argImpl.template packet<Unaligned>(row_col.first, row_col.second, val);
|
425
|
+
}
|
426
|
+
#endif
|
427
|
+
protected:
|
428
|
+
|
429
|
+
evaluator<ArgType> m_argImpl;
|
430
|
+
const XprType& m_xpr;
|
431
|
+
|
432
|
+
};
|
433
|
+
|
434
|
+
template<typename ArgType, int Rows, int Cols, int Order>
|
435
|
+
struct reshaped_evaluator<ArgType, Rows, Cols, Order, /* HasDirectAccess */ true>
|
436
|
+
: mapbase_evaluator<Reshaped<ArgType, Rows, Cols, Order>,
|
437
|
+
typename Reshaped<ArgType, Rows, Cols, Order>::PlainObject>
|
438
|
+
{
|
439
|
+
typedef Reshaped<ArgType, Rows, Cols, Order> XprType;
|
440
|
+
typedef typename XprType::Scalar Scalar;
|
441
|
+
|
442
|
+
EIGEN_DEVICE_FUNC explicit reshaped_evaluator(const XprType& xpr)
|
443
|
+
: mapbase_evaluator<XprType, typename XprType::PlainObject>(xpr)
|
444
|
+
{
|
445
|
+
// TODO: for the 3.4 release, this should be turned to an internal assertion, but let's keep it as is for the beta lifetime
|
446
|
+
eigen_assert(((internal::UIntPtr(xpr.data()) % EIGEN_PLAIN_ENUM_MAX(1,evaluator<XprType>::Alignment)) == 0) && "data is not aligned");
|
447
|
+
}
|
448
|
+
};
|
449
|
+
|
450
|
+
} // end namespace internal
|
451
|
+
|
452
|
+
} // end namespace Eigen
|
453
|
+
|
454
|
+
#endif // EIGEN_RESHAPED_H
|
@@ -60,8 +60,10 @@ template<typename Derived> class ReturnByValue
|
|
60
60
|
EIGEN_DEVICE_FUNC
|
61
61
|
inline void evalTo(Dest& dst) const
|
62
62
|
{ static_cast<const Derived*>(this)->evalTo(dst); }
|
63
|
-
EIGEN_DEVICE_FUNC
|
64
|
-
|
63
|
+
EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
|
64
|
+
inline Index rows() const EIGEN_NOEXCEPT { return static_cast<const Derived*>(this)->rows(); }
|
65
|
+
EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
|
66
|
+
inline Index cols() const EIGEN_NOEXCEPT { return static_cast<const Derived*>(this)->cols(); }
|
65
67
|
|
66
68
|
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
67
69
|
#define Unusable YOU_ARE_TRYING_TO_ACCESS_A_SINGLE_COEFFICIENT_IN_A_SPECIAL_EXPRESSION_WHERE_THAT_IS_NOT_ALLOWED_BECAUSE_THAT_WOULD_BE_INEFFICIENT
|
@@ -79,7 +81,7 @@ template<typename Derived> class ReturnByValue
|
|
79
81
|
|
80
82
|
template<typename Derived>
|
81
83
|
template<typename OtherDerived>
|
82
|
-
Derived& DenseBase<Derived>::operator=(const ReturnByValue<OtherDerived>& other)
|
84
|
+
EIGEN_DEVICE_FUNC Derived& DenseBase<Derived>::operator=(const ReturnByValue<OtherDerived>& other)
|
83
85
|
{
|
84
86
|
other.evalTo(derived());
|
85
87
|
return derived();
|
@@ -90,7 +92,7 @@ namespace internal {
|
|
90
92
|
// Expression is evaluated in a temporary; default implementation of Assignment is bypassed so that
|
91
93
|
// when a ReturnByValue expression is assigned, the evaluator is not constructed.
|
92
94
|
// TODO: Finalize port to new regime; ReturnByValue should not exist in the expression world
|
93
|
-
|
95
|
+
|
94
96
|
template<typename Derived>
|
95
97
|
struct evaluator<ReturnByValue<Derived> >
|
96
98
|
: public evaluator<typename internal::traits<Derived>::ReturnType>
|
@@ -98,7 +100,7 @@ struct evaluator<ReturnByValue<Derived> >
|
|
98
100
|
typedef ReturnByValue<Derived> XprType;
|
99
101
|
typedef typename internal::traits<Derived>::ReturnType PlainObject;
|
100
102
|
typedef evaluator<PlainObject> Base;
|
101
|
-
|
103
|
+
|
102
104
|
EIGEN_DEVICE_FUNC explicit evaluator(const XprType& xpr)
|
103
105
|
: m_result(xpr.rows(), xpr.cols())
|
104
106
|
{
|
@@ -12,7 +12,7 @@
|
|
12
12
|
#ifndef EIGEN_REVERSE_H
|
13
13
|
#define EIGEN_REVERSE_H
|
14
14
|
|
15
|
-
namespace Eigen {
|
15
|
+
namespace Eigen {
|
16
16
|
|
17
17
|
namespace internal {
|
18
18
|
|
@@ -44,7 +44,7 @@ template<typename PacketType> struct reverse_packet_cond<PacketType,false>
|
|
44
44
|
static inline PacketType run(const PacketType& x) { return x; }
|
45
45
|
};
|
46
46
|
|
47
|
-
} // end namespace internal
|
47
|
+
} // end namespace internal
|
48
48
|
|
49
49
|
/** \class Reverse
|
50
50
|
* \ingroup Core_Module
|
@@ -89,8 +89,10 @@ template<typename MatrixType, int Direction> class Reverse
|
|
89
89
|
|
90
90
|
EIGEN_INHERIT_ASSIGNMENT_OPERATORS(Reverse)
|
91
91
|
|
92
|
-
EIGEN_DEVICE_FUNC
|
93
|
-
|
92
|
+
EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
|
93
|
+
inline Index rows() const EIGEN_NOEXCEPT { return m_matrix.rows(); }
|
94
|
+
EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
|
95
|
+
inline Index cols() const EIGEN_NOEXCEPT { return m_matrix.cols(); }
|
94
96
|
|
95
97
|
EIGEN_DEVICE_FUNC inline Index innerStride() const
|
96
98
|
{
|
@@ -98,7 +100,7 @@ template<typename MatrixType, int Direction> class Reverse
|
|
98
100
|
}
|
99
101
|
|
100
102
|
EIGEN_DEVICE_FUNC const typename internal::remove_all<typename MatrixType::Nested>::type&
|
101
|
-
nestedExpression() const
|
103
|
+
nestedExpression() const
|
102
104
|
{
|
103
105
|
return m_matrix;
|
104
106
|
}
|
@@ -114,7 +116,7 @@ template<typename MatrixType, int Direction> class Reverse
|
|
114
116
|
*
|
115
117
|
*/
|
116
118
|
template<typename Derived>
|
117
|
-
inline typename DenseBase<Derived>::ReverseReturnType
|
119
|
+
EIGEN_DEVICE_FUNC inline typename DenseBase<Derived>::ReverseReturnType
|
118
120
|
DenseBase<Derived>::reverse()
|
119
121
|
{
|
120
122
|
return ReverseReturnType(derived());
|
@@ -136,7 +138,7 @@ DenseBase<Derived>::reverse()
|
|
136
138
|
*
|
137
139
|
* \sa VectorwiseOp::reverseInPlace(), reverse() */
|
138
140
|
template<typename Derived>
|
139
|
-
inline void DenseBase<Derived>::reverseInPlace()
|
141
|
+
EIGEN_DEVICE_FUNC inline void DenseBase<Derived>::reverseInPlace()
|
140
142
|
{
|
141
143
|
if(cols()>rows())
|
142
144
|
{
|
@@ -161,7 +163,7 @@ inline void DenseBase<Derived>::reverseInPlace()
|
|
161
163
|
}
|
162
164
|
|
163
165
|
namespace internal {
|
164
|
-
|
166
|
+
|
165
167
|
template<int Direction>
|
166
168
|
struct vectorwise_reverse_inplace_impl;
|
167
169
|
|
@@ -171,8 +173,10 @@ struct vectorwise_reverse_inplace_impl<Vertical>
|
|
171
173
|
template<typename ExpressionType>
|
172
174
|
static void run(ExpressionType &xpr)
|
173
175
|
{
|
176
|
+
const int HalfAtCompileTime = ExpressionType::RowsAtCompileTime==Dynamic?Dynamic:ExpressionType::RowsAtCompileTime/2;
|
174
177
|
Index half = xpr.rows()/2;
|
175
|
-
xpr.topRows(
|
178
|
+
xpr.topRows(fix<HalfAtCompileTime>(half))
|
179
|
+
.swap(xpr.bottomRows(fix<HalfAtCompileTime>(half)).colwise().reverse());
|
176
180
|
}
|
177
181
|
};
|
178
182
|
|
@@ -182,8 +186,10 @@ struct vectorwise_reverse_inplace_impl<Horizontal>
|
|
182
186
|
template<typename ExpressionType>
|
183
187
|
static void run(ExpressionType &xpr)
|
184
188
|
{
|
189
|
+
const int HalfAtCompileTime = ExpressionType::ColsAtCompileTime==Dynamic?Dynamic:ExpressionType::ColsAtCompileTime/2;
|
185
190
|
Index half = xpr.cols()/2;
|
186
|
-
xpr.leftCols(
|
191
|
+
xpr.leftCols(fix<HalfAtCompileTime>(half))
|
192
|
+
.swap(xpr.rightCols(fix<HalfAtCompileTime>(half)).rowwise().reverse());
|
187
193
|
}
|
188
194
|
};
|
189
195
|
|
@@ -201,9 +207,9 @@ struct vectorwise_reverse_inplace_impl<Horizontal>
|
|
201
207
|
*
|
202
208
|
* \sa DenseBase::reverseInPlace(), reverse() */
|
203
209
|
template<typename ExpressionType, int Direction>
|
204
|
-
void VectorwiseOp<ExpressionType,Direction>::reverseInPlace()
|
210
|
+
EIGEN_DEVICE_FUNC void VectorwiseOp<ExpressionType,Direction>::reverseInPlace()
|
205
211
|
{
|
206
|
-
internal::vectorwise_reverse_inplace_impl<Direction>::run(
|
212
|
+
internal::vectorwise_reverse_inplace_impl<Direction>::run(m_matrix);
|
207
213
|
}
|
208
214
|
|
209
215
|
} // end namespace Eigen
|
@@ -10,7 +10,7 @@
|
|
10
10
|
#ifndef EIGEN_SELECT_H
|
11
11
|
#define EIGEN_SELECT_H
|
12
12
|
|
13
|
-
namespace Eigen {
|
13
|
+
namespace Eigen {
|
14
14
|
|
15
15
|
/** \class Select
|
16
16
|
* \ingroup Core_Module
|
@@ -67,8 +67,10 @@ class Select : public internal::dense_xpr_base< Select<ConditionMatrixType, Then
|
|
67
67
|
eigen_assert(m_condition.cols() == m_then.cols() && m_condition.cols() == m_else.cols());
|
68
68
|
}
|
69
69
|
|
70
|
-
inline EIGEN_DEVICE_FUNC
|
71
|
-
|
70
|
+
inline EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
|
71
|
+
Index rows() const EIGEN_NOEXCEPT { return m_condition.rows(); }
|
72
|
+
inline EIGEN_DEVICE_FUNC EIGEN_CONSTEXPR
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73
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+
Index cols() const EIGEN_NOEXCEPT { return m_condition.cols(); }
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inline EIGEN_DEVICE_FUNC
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const Scalar coeff(Index i, Index j) const
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@@ -120,7 +122,7 @@ class Select : public internal::dense_xpr_base< Select<ConditionMatrixType, Then
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*/
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template<typename Derived>
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template<typename ThenDerived,typename ElseDerived>
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123
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-
inline const Select<Derived,ThenDerived,ElseDerived>
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+
inline EIGEN_DEVICE_FUNC const Select<Derived,ThenDerived,ElseDerived>
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DenseBase<Derived>::select(const DenseBase<ThenDerived>& thenMatrix,
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const DenseBase<ElseDerived>& elseMatrix) const
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{
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@@ -134,7 +136,7 @@ DenseBase<Derived>::select(const DenseBase<ThenDerived>& thenMatrix,
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*/
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template<typename Derived>
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template<typename ThenDerived>
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137
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-
inline const Select<Derived,ThenDerived, typename ThenDerived::ConstantReturnType>
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139
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+
inline EIGEN_DEVICE_FUNC const Select<Derived,ThenDerived, typename ThenDerived::ConstantReturnType>
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DenseBase<Derived>::select(const DenseBase<ThenDerived>& thenMatrix,
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141
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const typename ThenDerived::Scalar& elseScalar) const
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{
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@@ -149,7 +151,7 @@ DenseBase<Derived>::select(const DenseBase<ThenDerived>& thenMatrix,
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149
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*/
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150
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template<typename Derived>
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151
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template<typename ElseDerived>
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152
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-
inline const Select<Derived, typename ElseDerived::ConstantReturnType, ElseDerived >
|
154
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+
inline EIGEN_DEVICE_FUNC const Select<Derived, typename ElseDerived::ConstantReturnType, ElseDerived >
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153
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DenseBase<Derived>::select(const typename ElseDerived::Scalar& thenScalar,
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154
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const DenseBase<ElseDerived>& elseMatrix) const
|
155
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{
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