niwrap-afni 0.6.3__py3-none-any.whl → 0.7.0__py3-none-any.whl

niwrap_afni/afni/{uber_skel.py → uber_skel_py.py}

@@ -5,16 +5,30 @@ import typing
 import pathlib
 from styxdefs import *
 
-UBER_SKEL_METADATA = Metadata(
-    id="9c8b94aec9b6f8e9660a86aa775db219d44ebe60.boutiques",
-    name="uber_skel",
+UBER_SKEL_PY_METADATA = Metadata(
+    id="cffaa20c63a073437a32d6e77269be9b2e0c7f94.boutiques",
+    name="uber_skel.py",
     package="afni",
     container_image_tag="afni/afni_make_build:AFNI_24.2.06",
 )
 
 
-UberSkelParameters = typing.TypedDict('UberSkelParameters', {
-    "__STYXTYPE__": typing.Literal["uber_skel"],
+UberSkelPyParameters = typing.TypedDict('UberSkelPyParameters', {
+    "@type": typing.NotRequired[typing.Literal["afni/uber_skel.py"]],
+    "qt_options": typing.NotRequired[str | None],
+    "no_gui_flag": bool,
+    "print_script": bool,
+    "save_script": typing.NotRequired[str | None],
+    "user_var": typing.NotRequired[list[str] | None],
+    "help_howto_program": bool,
+    "help": bool,
+    "help_gui": bool,
+    "history": bool,
+    "show_valid_opts": bool,
+    "version": bool,
+})
+UberSkelPyParametersTagged = typing.TypedDict('UberSkelPyParametersTagged', {
+    "@type": typing.Literal["afni/uber_skel.py"],
     "qt_options": typing.NotRequired[str | None],
     "no_gui_flag": bool,
     "print_script": bool,
@@ -29,46 +43,15 @@ UberSkelParameters = typing.TypedDict('UberSkelParameters', {
 })
 
 
-def dyn_cargs(
-    t: str,
-) -> typing.Any:
-    """
-    Get build cargs function by command type.
-    
-    Args:
-        t: Command type.
-    Returns:
-        Build cargs function.
-    """
-    return {
-        "uber_skel": uber_skel_cargs,
-    }.get(t)
-
-
-def dyn_outputs(
-    t: str,
-) -> typing.Any:
-    """
-    Get build outputs function by command type.
-    
-    Args:
-        t: Command type.
-    Returns:
-        Build outputs function.
-    """
-    return {
-    }.get(t)
-
-
-class UberSkelOutputs(typing.NamedTuple):
+class UberSkelPyOutputs(typing.NamedTuple):
     """
-    Output object returned when calling `uber_skel(...)`.
+    Output object returned when calling `UberSkelPyParameters(...)`.
     """
     root: OutputPathType
     """Output root folder. This is the root folder for all outputs."""
 
 
-def uber_skel_params(
+def uber_skel_py_params(
     qt_options: str | None = None,
     no_gui_flag: bool = False,
     print_script: bool = False,
@@ -80,7 +63,7 @@ def uber_skel_params(
     history: bool = False,
     show_valid_opts: bool = False,
     version: bool = False,
-) -> UberSkelParameters:
+) -> UberSkelPyParametersTagged:
     """
     Build parameters.
     
@@ -100,7 +83,7 @@ def uber_skel_params(
         Parameter dictionary
     """
     params = {
-        "__STYXTYPE__": "uber_skel",
+        "@type": "afni/uber_skel.py",
         "no_gui_flag": no_gui_flag,
         "print_script": print_script,
         "help_howto_program": help_howto_program,
@@ -119,8 +102,8 @@ def uber_skel_params(
     return params
 
 
-def uber_skel_cargs(
-    params: UberSkelParameters,
+def uber_skel_py_cargs(
+    params: UberSkelPyParameters,
     execution: Execution,
 ) -> list[str]:
     """
@@ -134,44 +117,44 @@ def uber_skel_cargs(
     """
     cargs = []
     cargs.append("uber_skel.py")
-    if params.get("qt_options") is not None:
+    if params.get("qt_options", None) is not None:
         cargs.extend([
             "-qt_opts",
-            params.get("qt_options")
+            params.get("qt_options", None)
         ])
-    if params.get("no_gui_flag"):
+    if params.get("no_gui_flag", False):
         cargs.append("-no_gui")
-    if params.get("print_script"):
+    if params.get("print_script", False):
         cargs.append("-print_script")
-    if params.get("save_script") is not None:
+    if params.get("save_script", None) is not None:
         cargs.extend([
             "-save_script",
-            params.get("save_script")
+            params.get("save_script", None)
         ])
-    if params.get("user_var") is not None:
+    if params.get("user_var", None) is not None:
         cargs.extend([
             "-uvar",
-            *params.get("user_var")
+            *params.get("user_var", None)
         ])
-    if params.get("help_howto_program"):
+    if params.get("help_howto_program", False):
         cargs.append("-help_howto_program")
-    if params.get("help"):
+    if params.get("help", False):
         cargs.append("-help")
-    if params.get("help_gui"):
+    if params.get("help_gui", False):
         cargs.append("-help_gui")
-    if params.get("history"):
+    if params.get("history", False):
         cargs.append("-hist")
-    if params.get("show_valid_opts"):
+    if params.get("show_valid_opts", False):
         cargs.append("-show_valid_opts")
-    if params.get("version"):
+    if params.get("version", False):
         cargs.append("-ver")
     return cargs
 
 
-def uber_skel_outputs(
-    params: UberSkelParameters,
+def uber_skel_py_outputs(
+    params: UberSkelPyParameters,
     execution: Execution,
-) -> UberSkelOutputs:
+) -> UberSkelPyOutputs:
     """
     Build outputs object containing output file paths and possibly stdout/stderr.
     
@@ -181,19 +164,21 @@ def uber_skel_outputs(
     Returns:
         Outputs object.
     """
-    ret = UberSkelOutputs(
+    ret = UberSkelPyOutputs(
         root=execution.output_file("."),
     )
     return ret
 
 
-def uber_skel_execute(
-    params: UberSkelParameters,
-    execution: Execution,
-) -> UberSkelOutputs:
+def uber_skel_py_execute(
+    params: UberSkelPyParameters,
+    runner: Runner | None = None,
+) -> UberSkelPyOutputs:
     """
-    Sample uber processing program for initializing user and control variables, with
-    options for both GUI and non-GUI modes.
+    uber_skel.py
+    
+    Sample uber processing program for initializing user and control variables,
+    with options for both GUI and non-GUI modes.
     
     Author: AFNI Developers
     
@@ -201,18 +186,20 @@ def uber_skel_execute(
     
     Args:
         params: The parameters.
-        execution: The execution object.
+        runner: Command runner.
     Returns:
-        NamedTuple of outputs (described in `UberSkelOutputs`).
+        NamedTuple of outputs (described in `UberSkelPyOutputs`).
     """
+    runner = runner or get_global_runner()
+    execution = runner.start_execution(UBER_SKEL_PY_METADATA)
     params = execution.params(params)
-    cargs = uber_skel_cargs(params, execution)
-    ret = uber_skel_outputs(params, execution)
+    cargs = uber_skel_py_cargs(params, execution)
+    ret = uber_skel_py_outputs(params, execution)
     execution.run(cargs)
     return ret
 
 
-def uber_skel(
+def uber_skel_py(
     qt_options: str | None = None,
     no_gui_flag: bool = False,
     print_script: bool = False,
@@ -225,10 +212,12 @@ def uber_skel(
     show_valid_opts: bool = False,
     version: bool = False,
     runner: Runner | None = None,
-) -> UberSkelOutputs:
+) -> UberSkelPyOutputs:
     """
-    Sample uber processing program for initializing user and control variables, with
-    options for both GUI and non-GUI modes.
+    uber_skel.py
+    
+    Sample uber processing program for initializing user and control variables,
+    with options for both GUI and non-GUI modes.
     
     Author: AFNI Developers
     
@@ -248,11 +237,9 @@ def uber_skel(
         version: Show version.
         runner: Command runner.
     Returns:
-        NamedTuple of outputs (described in `UberSkelOutputs`).
+        NamedTuple of outputs (described in `UberSkelPyOutputs`).
     """
-    runner = runner or get_global_runner()
-    execution = runner.start_execution(UBER_SKEL_METADATA)
-    params = uber_skel_params(
+    params = uber_skel_py_params(
         qt_options=qt_options,
         no_gui_flag=no_gui_flag,
         print_script=print_script,
@@ -265,13 +252,13 @@ def uber_skel(
         show_valid_opts=show_valid_opts,
         version=version,
     )
-    return uber_skel_execute(params, execution)
+    return uber_skel_py_execute(params, runner)
 
 
 __all__ = [
-    "UBER_SKEL_METADATA",
-    "UberSkelOutputs",
-    "UberSkelParameters",
-    "uber_skel",
-    "uber_skel_params",
+    "UBER_SKEL_PY_METADATA",
+    "UberSkelPyOutputs",
+    "uber_skel_py",
+    "uber_skel_py_execute",
+    "uber_skel_py_params",
 ]