npm - molstar - Versions diffs - 2.3.5 → 2.3.9 - Mend

molstar 2.3.5 → 2.3.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1658) hide show

package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js CHANGED Viewed

@@ -73,7 +73,7 @@ export function getContourLevelEmdb(plugin, taskCtx, emdbId) {
             switch (_a.label) {
                 case 0:
                     emdbHeaderServer = plugin.config.get(PluginConfig.VolumeStreaming.EmdbHeaderServer);
-                    return [4 /*yield*/, plugin.fetch({ url: emdbHeaderServer + "/" + emdbId.toUpperCase() + "/header/" + emdbId.toLowerCase() + ".xml", type: 'xml' }).runInContext(taskCtx)];
+                    return [4 /*yield*/, plugin.fetch({ url: "".concat(emdbHeaderServer, "/").concat(emdbId.toUpperCase(), "/header/").concat(emdbId.toLowerCase(), ".xml"), type: 'xml' }).runInContext(taskCtx)];
                 case 1:
                     header = _a.sent();
                     map = header.getElementsByTagName('map')[0];
@@ -92,7 +92,7 @@ export function getContourLevelPdbe(plugin, taskCtx, emdbId) {
                 case 0:
                     // TODO: parametrize URL in plugin settings?
                     emdbId = emdbId.toUpperCase();
-                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/emdb/api/entry/map/" + emdbId, type: 'json' }).runInContext(taskCtx)];
+                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/emdb/api/entry/map/".concat(emdbId), type: 'json' }).runInContext(taskCtx)];
                 case 1:
                     header = _e.sent();
                     contours = (_b = (_a = header === null || header === void 0 ? void 0 : header.map) === null || _a === void 0 ? void 0 : _a.contour_list) === null || _b === void 0 ? void 0 : _b.contour;
@@ -114,7 +114,7 @@ function getContourLevelPdbeLegacy(plugin, taskCtx, emdbId) {
                 case 0:
                     // TODO: parametrize URL in plugin settings?
                     emdbId = emdbId.toUpperCase();
-                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/emdb/entry/map/" + emdbId, type: 'json' }).runInContext(taskCtx)];
+                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/emdb/entry/map/".concat(emdbId), type: 'json' }).runInContext(taskCtx)];
                 case 1:
                     header = _d.sent();
                     emdbEntry = header === null || header === void 0 ? void 0 : header[emdbId];
@@ -133,7 +133,7 @@ export function getEmdbIds(plugin, taskCtx, pdbId) {
         var summary, summaryEntry, emdbIds, emdb;
         return __generator(this, function (_b) {
             switch (_b.label) {
-                case 0: return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/" + pdbId, type: 'json' }).runInContext(taskCtx)];
+                case 0: return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/".concat(pdbId), type: 'json' }).runInContext(taskCtx)];
                 case 1:
                     summary = _b.sent();
                     summaryEntry = summary === null || summary === void 0 ? void 0 : summary[pdbId];
@@ -141,12 +141,12 @@ export function getEmdbIds(plugin, taskCtx, pdbId) {
                     if ((_a = summaryEntry === null || summaryEntry === void 0 ? void 0 : summaryEntry[0]) === null || _a === void 0 ? void 0 : _a.related_structures) {
                         emdb = summaryEntry[0].related_structures.filter(function (s) { return s.resource === 'EMDB' && s.relationship === 'associated EM volume'; });
                         if (!emdb.length) {
-                            throw new Error("No related EMDB entry found for '" + pdbId + "'.");
+                            throw new Error("No related EMDB entry found for '".concat(pdbId, "'."));
                         }
                         emdbIds.push.apply(emdbIds, emdb.map(function (e) { return e.accession; }));
                     }
                     else {
-                        throw new Error("No related EMDB entry found for '" + pdbId + "'.");
+                        throw new Error("No related EMDB entry found for '".concat(pdbId, "'."));
                     }
                     return [2 /*return*/, emdbIds];
             }

package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"util.js","sourceRoot":"","sources":["../../../../../src/mol-plugin/behavior/dynamic/volume-streaming/util.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAa,KAAK,EAAE,MAAM,iCAAiC,CAAC;AAInE,OAAO,EAAE,WAAW,EAAE,MAAM,+CAA+C,CAAC;AAC5E,OAAO,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAE/C,MAAM,UAAU,kBAAkB,CAAC,CAAa,EAAE,WAA4C;IAA5C,4BAAA,EAAA,qBAA4C;IAC1F,IAAI,CAAC,CAAC;QAAE,OAAO,WAAW,CAAC;IAE3B,IAAM,KAAK,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAC1B,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC;QAAE,OAAO,WAAW,CAAC;IAE1D,8FAA8F;IAC9F,8FAA8F;IAC9F,IAAI,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IACvC,IAAI,KAAK,CAAC,UAAU,CAAC,KAAK,CAAC;QAAE,OAAO,OAAO,CAAC;IAE5C,yCAAyC;IACzC,IAAI,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IACvC,IAAI,KAAK,CAAC,UAAU,CAAC,KAAK,CAAC;QAAE,OAAO,OAAO,CAAC;IAC5C,OAAO,WAAW,CAAC;AACvB,CAAC;AAED,oEAAoE;AACpE,MAAM,UAAU,QAAQ,CAAC,KAAY;IACjC,IAAM,GAAG,GAAa,EAAE,CAAC;IACzB,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC;QAAE,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAExD,IAAA,KAAmC,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC,EAAE,CAAC,qBAAqB,EAA/E,KAAK,WAAA,EAAE,OAAO,aAAA,EAAE,YAAY,kBAAmD,CAAC;IACxF,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAE/C,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,OAAO,CAAC,QAAQ,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;QAChD,IAAI,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,WAAW,EAAE,KAAK,MAAM,IAAI,YAAY,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,sBAAsB,EAAE;YAC/F,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;SAC5B;KACJ;IAED,OAAO,GAAG,CAAC;AACf,CAAC;AAED,MAAM,UAAU,UAAU,CAAC,KAAY;IACnC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;AAC3B,CAAC;AAED,MAAM,UAAU,MAAM,CAAC,MAA6B,EAAE,CAAa;IAC/D,IAAI,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,CAAC,MAAM;QAAE,OAAO,EAAE,CAAC;IACtC,IAAM,KAAK,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAC1B,QAAQ,MAAM,EAAE;QACZ,KAAK,IAAI,CAAC,CAAC,OAAO,QAAQ,CAAC,KAAK,CAAC,CAAC;QAClC,KAAK,OAAO,CAAC,CAAC,OAAO,UAAU,CAAC,KAAK,CAAC,CAAC;KAC1C;AACL,CAAC;AAED,MAAM,UAAgB,eAAe,CAAC,QAAyB,EAAE,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;YAC3H,QAAQ,QAAQ,EAAE;gBACd,KAAK,MAAM,CAAC,CAAC,sBAAO,mBAAmB,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,EAAC;gBACjE,KAAK,MAAM,CAAC,CAAC,sBAAO,mBAAmB,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,EAAC;aACpE;;;;CACJ;AAED,MAAM,UAAgB,mBAAmB,CAAC,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;;;;oBAC9F,gBAAgB,GAAG,MAAM,CAAC,MAAM,CAAC,GAAG,CAAC,YAAY,CAAC,eAAe,CAAC,gBAAgB,CAAC,CAAC;oBAC3E,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,UAAG,gBAAgB,cAAI,MAAM,CAAC,WAAW,EAAE,qBAAW,MAAM,CAAC,WAAW,EAAE,SAAM,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAAzJ,MAAM,GAAG,SAAgJ;oBACzJ,GAAG,GAAG,MAAM,CAAC,oBAAoB,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;oBAC5C,YAAY,GAAG,UAAU,CAAC,GAAG,CAAC,oBAAoB,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,WAAY,CAAC,CAAC;oBAE1F,sBAAO,YAAY,EAAC;;;;CACvB;AAED,MAAM,UAAgB,mBAAmB,CAAC,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;;;;;oBACpG,4CAA4C;oBAC5C,MAAM,GAAG,MAAM,CAAC,WAAW,EAAE,CAAC;oBACf,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,mDAA4C,MAAM,CAAE,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAA9H,MAAM,GAAG,SAAqH;oBAC9H,QAAQ,GAAG,MAAA,MAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,GAAG,0CAAE,YAAY,0CAAE,OAAO,CAAC;oBAEpD,IAAI,CAAC,QAAQ,IAAI,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE;wBACpC,8BAA8B;wBAC9B,sBAAO,yBAAyB,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,EAAC;qBAC7D;oBAED,sBAAO,MAAA,MAAA,QAAQ,CAAC,IAAI,CAAC,UAAC,CAAM,IAAK,OAAA,CAAC,CAAC,OAAO,EAAT,CAAS,CAAC,0CAAE,KAAK,mCAAI,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAC;;;;CAC3E;AAED,SAAe,yBAAyB,CAAC,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;;;;;oBACnG,4CAA4C;oBAC5C,MAAM,GAAG,MAAM,CAAC,WAAW,EAAE,CAAC;oBACf,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,wDAAiD,MAAM,CAAE,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAAnI,MAAM,GAAG,SAA0H;oBACnI,SAAS,GAAG,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAG,MAAM,CAAC,CAAC;oBAC/B,YAAY,GAAuB,KAAK,CAAC,CAAC;oBAC9C,IAAI,CAAA,MAAA,MAAA,MAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAG,CAAC,CAAC,0CAAE,GAAG,0CAAE,aAAa,0CAAE,KAAK,MAAK,KAAK,CAAC,EAAE;wBACtD,YAAY,GAAG,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,aAAa,CAAC,KAAK,CAAC;qBACxD;oBAED,sBAAO,YAAY,EAAC;;;;CACvB;AAED,MAAM,UAAgB,UAAU,CAAC,MAAqB,EAAE,OAAuB,EAAE,KAAa;;;;;;wBAE1E,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,2DAAoD,KAAK,CAAE,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAAtI,OAAO,GAAG,SAA4H;oBAEtI,YAAY,GAAG,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAG,KAAK,CAAC,CAAC;oBAChC,OAAO,GAAa,EAAE,CAAC;oBAC7B,IAAI,MAAA,YAAY,aAAZ,YAAY,uBAAZ,YAAY,CAAG,CAAC,CAAC,0CAAE,kBAAkB,EAAE;wBACjC,IAAI,GAAG,YAAY,CAAC,CAAC,CAAC,CAAC,kBAAkB,CAAC,MAAM,CAAC,UAAC,CAAM,IAAK,OAAA,CAAC,CAAC,QAAQ,KAAK,MAAM,IAAI,CAAC,CAAC,YAAY,KAAK,sBAAsB,EAAlE,CAAkE,CAAC,CAAC;wBACvI,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;4BACd,MAAM,IAAI,KAAK,CAAC,2CAAoC,KAAK,OAAI,CAAC,CAAC;yBAClE;wBACD,OAAO,CAAC,IAAI,OAAZ,OAAO,EAAS,IAAI,CAAC,GAAG,CAAC,UAAC,CAAwB,IAAK,OAAA,CAAC,CAAC,SAAS,EAAX,CAAW,CAAC,EAAE;qBACxE;yBAAM;wBACH,MAAM,IAAI,KAAK,CAAC,2CAAoC,KAAK,OAAI,CAAC,CAAC;qBAClE;oBAED,sBAAO,OAAO,EAAC;;;;CAClB"}

package/lib/mol-plugin/behavior/static/state.js CHANGED Viewed

@@ -180,7 +180,7 @@ export function Snapshots(ctx) {
     });
     PluginCommands.State.Snapshots.Upload.subscribe(ctx, function (_a) {
         var name = _a.name, description = _a.description, playOnLoad = _a.playOnLoad, serverUrl = _a.serverUrl, params = _a.params;
-        return fetch(urlCombine(serverUrl, "set?name=" + encodeURIComponent(name || '') + "&description=" + encodeURIComponent(description || '')), {
+        return fetch(urlCombine(serverUrl, "set?name=".concat(encodeURIComponent(name || ''), "&description=").concat(encodeURIComponent(description || ''))), {
             method: 'POST',
             mode: 'cors',
             referrer: 'no-referrer',
@@ -212,11 +212,11 @@ export function Snapshots(ctx) {
             return __generator(this, function (_b) {
                 switch (_b.label) {
                     case 0:
-                        filename = "mol-star_state_" + (name || getFormattedTime()) + "." + (type === 'json' ? 'molj' : 'molx');
+                        filename = "mol-star_state_".concat((name || getFormattedTime()), ".").concat(type === 'json' ? 'molj' : 'molx');
                         return [4 /*yield*/, ctx.managers.snapshot.serialize({ type: type, params: params })];
                     case 1:
                         data = _b.sent();
-                        download(data, "" + filename);
+                        download(data, "".concat(filename));
                         return [2 /*return*/];
                 }
             });
@@ -235,7 +235,7 @@ export function Snapshots(ctx) {
                     case 0: return [4 /*yield*/, ctx.runTask(ctx.fetch({ url: url, type: 'binary' }))];
                     case 1:
                         data = _b.sent();
-                        return [2 /*return*/, ctx.managers.snapshot.open(new File([data], "state." + type))];
+                        return [2 /*return*/, ctx.managers.snapshot.open(new File([data], "state.".concat(type)))];
                 }
             });
         });

package/lib/mol-plugin/behavior/static/state.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/mol-plugin/commands.d.ts CHANGED Viewed

@@ -259,13 +259,13 @@ export declare const PluginCommands: {
                     selectStrength: number;
                     markerPriority: number;
                     xrayEdgeFalloff: number;
-                    style: import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "flat"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "metallic"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<{
+                    style: import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<{
                         lightIntensity: any;
                         ambientIntensity: any;
                         metalness: any;
                         roughness: any;
                         reflectivity: any;
-                    }>, "custom"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "matte"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "glossy"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "plastic">;
+                    }>, "custom"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "matte"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "flat"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "glossy"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "metallic"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "plastic">;
                     clip: import("../mol-util/param-definition").ParamDefinition.Normalize<{
                         variant: any;
                         objects: any;

package/lib/mol-plugin/config.js CHANGED Viewed

@@ -16,10 +16,17 @@ var PluginConfigItem = /** @class */ (function () {
 }());
 export { PluginConfigItem };
 function item(key, defaultValue) { return new PluginConfigItem(key, defaultValue); }
-// adapted from https://stackoverflow.com/questions/9038625/detect-if-device-is-ios
-function is_iOS() {
+function preferWebGl1() {
     if (typeof navigator === 'undefined' || typeof window === 'undefined')
         return false;
+    // WebGL2 isn't working in MacOS 12.0.1 Safari 15.1 (but is working in Safari tech preview)
+    // prefer webgl 1 based on the userAgent substring
+    if (navigator.userAgent.indexOf('Version/15.1 Safari') > 0) {
+        return true;
+    }
+    // Check for iOS device which enabled WebGL2 recently but it doesn't seem
+    // to be full up to speed yet.
+    // adapted from https://stackoverflow.com/questions/9038625/detect-if-device-is-ios
     var isIOS = /iPad|iPhone|iPod/.test(navigator.userAgent);
     var isAppleDevice = navigator.userAgent.includes('Macintosh');
     var isTouchScreen = navigator.maxTouchPoints >= 4; // true for iOS 13 (and hopefully beyond)
@@ -37,7 +44,7 @@ export var PluginConfig = {
         EnableWboit: item('plugin-config.enable-wboit', true),
         // as of Oct 1 2021, WebGL 2 doesn't work on iOS 15.
         // TODO: check back in a few weeks to see if it was fixed
-        PreferWebGl1: item('plugin-config.prefer-webgl1', is_iOS()),
+        PreferWebGl1: item('plugin-config.prefer-webgl1', preferWebGl1()),
     },
     State: {
         DefaultServer: item('plugin-state.server', 'https://webchem.ncbr.muni.cz/molstar-state'),

package/lib/mol-plugin/config.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"config.js","sourceRoot":"","sources":["../../src/mol-plugin/config.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,SAAS,EAAE,KAAK,EAAE,MAAM,wBAAwB,CAAC;AAM1D;IAGI,0BAAmB,GAAW,EAAS,YAAgB;QAApC,QAAG,GAAH,GAAG,CAAQ;QAAS,iBAAY,GAAZ,YAAY,CAAI;IAAI,CAAC;IAF5D,mCAAQ,GAAR,cAAa,OAAO,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;IAC/B,kCAAO,GAAP,cAAY,OAAO,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;IAElC,uBAAC;AAAD,CAAC,AAJD,IAIC;;AAED,SAAS,IAAI,CAAI,GAAW,EAAE,YAAgB,IAAI,OAAO,IAAI,gBAAgB,CAAC,GAAG,EAAE,YAAY,CAAC,CAAC,CAAC,CAAC;AAGnG,SAAS,YAAY;IACjB,IAAI,OAAO,SAAS,KAAK,WAAW,IAAI,OAAO,MAAM,KAAK,WAAW;QAAE,OAAO,KAAK,CAAC;IAEpF,2FAA2F;IAC3F,kDAAkD;IAClD,IAAI,SAAS,CAAC,SAAS,CAAC,OAAO,CAAC,qBAAqB,CAAC,GAAG,CAAC,EAAE;QACxD,OAAO,IAAI,CAAC;KACf;IAED,yEAAyE;IACzE,8BAA8B;IAE9B,mFAAmF;IACnF,IAAM,KAAK,GAAG,kBAAkB,CAAC,IAAI,CAAC,SAAS,CAAC,SAAS,CAAC,CAAC;IAC3D,IAAM,aAAa,GAAG,SAAS,CAAC,SAAS,CAAC,QAAQ,CAAC,WAAW,CAAC,CAAC;IAChE,IAAM,aAAa,GAAG,SAAS,CAAC,cAAc,IAAI,CAAC,CAAC,CAAC,yCAAyC;IAC9F,OAAO,CAAE,MAAc,CAAC,QAAQ,IAAI,CAAC,KAAK,IAAI,CAAC,aAAa,IAAI,aAAa,CAAC,CAAC,CAAC;AACpF,CAAC;AAED,MAAM,CAAC,IAAM,YAAY,GAAG;IACxB,IAAI,MAAA;IACJ,OAAO,EAAE;QACL,eAAe,EAAE,IAAI,CAAC,+BAA+B,EAAE,GAAG,CAAC;QAC3D,mBAAmB,EAAE,IAAI,CAAC,oCAAoC,EAAE,KAAK,CAAC;QACtE,4BAA4B,EAAE,IAAI,CAAC,+CAA+C,EAAE,KAAK,CAAC;QAC1F,UAAU,EAAE,IAAI,CAAC,2BAA2B,EAAE,CAAC,CAAC;QAChD,SAAS,EAAE,IAAI,CAAC,0BAA0B,EAAE,IAAI,CAAC;QACjD,WAAW,EAAE,IAAI,CAAC,4BAA4B,EAAE,CAAC,CAAC;QAClD,WAAW,EAAE,IAAI,CAAC,4BAA4B,EAAE,IAAI,CAAC;QACrD,oDAAoD;QACpD,yDAAyD;QACzD,YAAY,EAAE,IAAI,CAAC,6BAA6B,EAAE,YAAY,EAAE,CAAC;KACpE;IACD,KAAK,EAAE;QACH,aAAa,EAAE,IAAI,CAAC,qBAAqB,EAAE,4CAA4C,CAAC;QACxF,aAAa,EAAE,IAAI,CAAC,qBAAqB,EAAE,4CAA4C,CAAC;QACxF,eAAe,EAAE,IAAI,CAAC,yBAAyB,EAAE,CAAC,CAAC;KACtD;IACD,eAAe,EAAE;QACb,OAAO,EAAE,IAAI,CAAC,0BAA0B,EAAE,IAAI,CAAC;QAC/C,aAAa,EAAE,IAAI,CAAC,yBAAyB,EAAE,wBAAwB,CAAC;QACxE,SAAS,EAAE,IAAI,CAAC,6BAA6B,EAAE,UAAC,CAAY,EAAE,MAAqB;YAC/E,OAAO,CAAC,CAAC,MAAM,CAAC,MAAM,KAAK,CAAC,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC;QAC7E,CAAC,CAAC;QACF,gBAAgB,EAAE,IAAI,CAAC,qCAAqC,EAAE,2CAA2C,CAAC;KAC7G;IACD,QAAQ,EAAE;QACN,UAAU,EAAE,IAAI,CAAC,2BAA2B,EAAE,IAAI,CAAC;QACnD,YAAY,EAAE,IAAI,CAAC,6BAA6B,EAAE,IAAI,CAAC;QACvD,YAAY,EAAE,IAAI,CAAC,6BAA6B,EAAE,IAAI,CAAC;QACvD,iBAAiB,EAAE,IAAI,CAAC,oCAAoC,EAAE,IAAI,CAAC;QACnE,aAAa,EAAE,IAAI,CAAC,8BAA8B,EAAE,IAAI,CAAC;KAC5D;IACD,QAAQ,EAAE;QACN,kBAAkB,EAAE,IAAI,CAAsB,+BAA+B,EAAE,MAAM,CAAC;QACtF,mBAAmB,EAAE,IAAI,CAAuB,gCAAgC,EAAE,MAAM,CAAC;KAC5F;IACD,SAAS,EAAE;QACP,cAAc,EAAE,IAAI,CAAC,2BAA2B,EAAE,SAAS,CAAC,qBAAqB,CAAC;QAClF,iCAAiC,EAAE,IAAI,CAAqD,gDAAgD,EAAE,EAAG,CAAC;KACrJ;CACJ,CAAC;AAEF;IAgBI,6BAAY,OAAuC;QAAnD,iBAGC;QAlBO,YAAO,GAAG,IAAI,GAAG,EAAkC,CAAC;QAgBxD,IAAI,CAAC,OAAO;YAAE,OAAO;QACrB,OAAO,CAAC,OAAO,CAAC,UAAC,EAAM;gBAAL,CAAC,QAAA,EAAE,CAAC,QAAA;YAAM,OAAA,KAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC;QAAtB,CAAsB,CAAC,CAAC;IACxD,CAAC;IAhBD,iCAAG,GAAH,UAAO,GAAwB;QAC3B,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC;YAAE,OAAO,GAAG,CAAC,YAAY,CAAC;QACpD,OAAO,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,CAAM,CAAC;IACtC,CAAC;IAED,iCAAG,GAAH,UAAO,GAAwB,EAAE,KAAQ;QACrC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,CAAC;IACjC,CAAC;IAED,oCAAM,GAAN,UAAU,GAAwB;QAC9B,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;IAC7B,CAAC;IAML,0BAAC;AAAD,CAAC,AApBD,IAoBC"}

package/lib/mol-plugin/context.js CHANGED Viewed

@@ -201,8 +201,7 @@ var PluginContext = /** @class */ (function () {
                 var pickPadding = (_c = this.config.get(PluginConfig.General.PickPadding)) !== null && _c !== void 0 ? _c : 1;
                 var enableWboit = this.config.get(PluginConfig.General.EnableWboit) || false;
                 var preferWebGl1 = this.config.get(PluginConfig.General.PreferWebGl1) || false;
-                this.canvas3dContext = Canvas3DContext.fromCanvas(canvas, { antialias: antialias, preserveDrawingBuffer: preserveDrawingBuffer, pixelScale: pixelScale, pickScale: pickScale, enableWboit: enableWboit, preferWebGl1: preferWebGl1 });
-                this.canvas3dContext = Canvas3DContext.fromCanvas(canvas, { antialias: antialias, preserveDrawingBuffer: preserveDrawingBuffer, pixelScale: pixelScale, pickScale: pickScale, pickPadding: pickPadding, enableWboit: enableWboit });
+                this.canvas3dContext = Canvas3DContext.fromCanvas(canvas, { antialias: antialias, preserveDrawingBuffer: preserveDrawingBuffer, pixelScale: pixelScale, pickScale: pickScale, pickPadding: pickPadding, enableWboit: enableWboit, preferWebGl1: preferWebGl1 });
             }
             this.canvas3d = Canvas3D.create(this.canvas3dContext);
             this.canvas3dInit.next(true);
@@ -423,7 +422,7 @@ var PluginContext = /** @class */ (function () {
                         return [4 /*yield*/, this.initBehaviors()];
                     case 1:
                         _a.sent();
-                        this.log.message("Mol* Plugin " + PLUGIN_VERSION + " [" + PLUGIN_VERSION_DATE.toLocaleString() + "]");
+                        this.log.message("Mol* Plugin ".concat(PLUGIN_VERSION, " [").concat(PLUGIN_VERSION_DATE.toLocaleString(), "]"));
                         if (!isProductionMode)
                             this.log.message("Development mode enabled");
                         if (isDebugMode)

package/lib/mol-plugin/context.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/mol-plugin/layout.d.ts CHANGED Viewed

@@ -12,10 +12,10 @@ export declare const PluginLayoutStateParams: {
     isExpanded: PD.BooleanParam;
     showControls: PD.BooleanParam;
     regionState: PD.Group<PD.Normalize<{
-        left: "full" | "collapsed" | "hidden";
-        top: "full" | "hidden";
-        right: "full" | "hidden";
-        bottom: "full" | "hidden";
+        left: "hidden" | "full" | "collapsed";
+        top: "hidden" | "full";
+        right: "hidden" | "full";
+        bottom: "hidden" | "full";
     }>>;
     controlsDisplay: PD.Value<PluginLayoutControlsDisplay>;
 };

package/lib/mol-plugin/util/viewport-screenshot.d.ts CHANGED Viewed

@@ -26,7 +26,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             height: number;
         }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "viewport"> | PD.NamedParams<PD.Normalize<unknown>, "hd"> | PD.NamedParams<PD.Normalize<unknown>, "full-hd"> | PD.NamedParams<PD.Normalize<unknown>, "ultra-hd">>;
         transparent: PD.BooleanParam;
-        axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
+        axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
             alpha: number;
             ignoreLight: boolean;
             colorX: Color;
@@ -38,7 +38,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             flatShaded: boolean;
             xrayShaded: boolean;
             quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
-        }>, "on">>;
+        }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     };
     readonly behaviors: {
         values: import("rxjs").BehaviorSubject<PD.Values<{
@@ -47,7 +47,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
                 height: number;
             }>, "custom">>;
             transparent: PD.BooleanParam;
-            axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
+            axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
                 alpha: number;
                 ignoreLight: boolean;
                 colorX: Color;
@@ -59,7 +59,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
                 flatShaded: boolean;
                 xrayShaded: boolean;
                 quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
-            }>, "on">>;
+            }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
         }>>;
         cropParams: import("rxjs").BehaviorSubject<{
             auto: boolean;
@@ -76,7 +76,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             height: number;
         }>, "custom">>;
         transparent: PD.BooleanParam;
-        axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
+        axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
             alpha: number;
             ignoreLight: boolean;
             colorX: Color;
@@ -88,7 +88,7 @@ declare class ViewportScreenshotHelper extends PluginComponent {
             flatShaded: boolean;
             xrayShaded: boolean;
             quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
-        }>, "on">>;
+        }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     }>;
     get cropParams(): {
         auto: boolean;

package/lib/mol-plugin/util/viewport-screenshot.js CHANGED Viewed

@@ -173,7 +173,7 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
         var uniqueIds = new Set();
         models.forEach(function (m) { return uniqueIds.add(m.entryId.toUpperCase()); });
         var idString = SetUtils.toArray(uniqueIds).join('-');
-        return "" + (idString || 'molstar-image') + extension;
+        return "".concat(idString || 'molstar-image').concat(extension);
     };
     ViewportScreenshotHelper.prototype.resetCrop = function () {
         this.behaviors.relativeCrop.next({ x: 0, y: 0, width: 1, height: 1 });

package/lib/mol-plugin/util/viewport-screenshot.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/mol-plugin/version.js CHANGED Viewed

@@ -1,2 +1,2 @@
-export var PLUGIN_VERSION = '2.3.5';
-export var PLUGIN_VERSION_DATE = new Date(typeof __MOLSTAR_DEBUG_TIMESTAMP__ !== 'undefined' ? __MOLSTAR_DEBUG_TIMESTAMP__ : 1634660519467);
+export var PLUGIN_VERSION = '2.3.9';
+export var PLUGIN_VERSION_DATE = new Date(typeof __MOLSTAR_DEBUG_TIMESTAMP__ !== 'undefined' ? __MOLSTAR_DEBUG_TIMESTAMP__ : 1637456207413);

package/lib/mol-plugin-state/actions/file.js CHANGED Viewed

@@ -15,7 +15,7 @@ export var OpenFiles = StateAction.build({
     params: function (a, ctx) {
         var _a = ctx.dataFormats, extensions = _a.extensions, options = _a.options;
         return {
-            files: PD.FileList({ accept: Array.from(extensions.values()).map(function (e) { return "." + e; }).join(',') + ',.gz,.zip', multiple: true }),
+            files: PD.FileList({ accept: Array.from(extensions.values()).map(function (e) { return ".".concat(e); }).join(',') + ',.gz,.zip', multiple: true }),
             format: PD.MappedStatic('auto', {
                 auto: PD.EmptyGroup(),
                 specific: PD.Select(options[0][0], options)
@@ -57,7 +57,7 @@ export var OpenFiles = StateAction.build({
                                             ? plugin.dataFormats.auto(info, (_b = data.cell) === null || _b === void 0 ? void 0 : _b.obj)
                                             : plugin.dataFormats.get(params.format.params);
                                         if (!provider) {
-                                            plugin.log.warn("OpenFiles: could not find data provider for '" + info.name + "." + info.ext + "'");
+                                            plugin.log.warn("OpenFiles: could not find data provider for '".concat(info.name, ".").concat(info.ext, "'"));
                                             return [3 /*break*/, 8];
                                         }
                                         return [4 /*yield*/, provider.parse(plugin, data)];
@@ -115,7 +115,7 @@ export var DownloadFile = StateAction.build({
                                         _b.trys.push([0, 5, , 6]);
                                         provider = plugin.dataFormats.get(params.format);
                                         if (!provider) {
-                                            plugin.log.warn("DownloadFile: could not find data provider for '" + params.format + "'");
+                                            plugin.log.warn("DownloadFile: could not find data provider for '".concat(params.format, "'"));
                                             return [2 /*return*/];
                                         }
                                         return [4 /*yield*/, plugin.builders.data.download({ url: params.url, isBinary: params.isBinary })];

package/lib/mol-plugin-state/actions/file.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/mol-plugin-state/actions/structure.d.ts CHANGED Viewed

@@ -9,10 +9,10 @@ import { ParamDefinition as PD } from '../../mol-util/param-definition';
 import { PluginStateObject } from '../objects';
 export declare const PdbDownloadProvider: {
     rcsb: PD.Group<PD.Normalize<{
-        encoding: "bcif" | "cif";
+        encoding: "cif" | "bcif";
     }>>;
     pdbe: PD.Group<PD.Normalize<{
-        variant: "updated-bcif" | "updated" | "updtaed-bcif" | "archival";
+        variant: "updated" | "updated-bcif" | "updtaed-bcif" | "archival";
     }>>;
 };
 export declare type PdbDownloadProvider = keyof typeof PdbDownloadProvider;