molstar 2.3.5 → 2.3.9

package/lib/mol-repr/structure/registry.d.ts

@@ -14,7 +14,7 @@ export declare namespace StructureRepresentationRegistry {
         cartoon: import("./representation").StructureRepresentationProvider<{
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -28,6 +28,7 @@ export declare namespace StructureRepresentationRegistry {
             aspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             arrowFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             tubularHelices: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            helixProfile: import("../../mol-util/param-definition").ParamDefinition.Select<"square" | "elliptical" | "rounded">;
             linearSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "cartoon">;
         backbone: import("./representation").StructureRepresentationProvider<{
@@ -35,7 +36,7 @@ export declare namespace StructureRepresentationRegistry {
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -49,20 +50,23 @@ export declare namespace StructureRepresentationRegistry {
         }, "backbone">;
         'ball-and-stick': import("./representation").StructureRepresentationProvider<{
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
             tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             adjustCylinderLength: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-            excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+            includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+            excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             aromaticBonds: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"off" | "symmetric" | "offset">;
+            multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"off" | "offset" | "symmetric">;
             linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            aromaticScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticDashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -84,12 +88,15 @@ export declare namespace StructureRepresentationRegistry {
             linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            aromaticScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticDashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -105,19 +112,22 @@ export declare namespace StructureRepresentationRegistry {
         ellipsoid: import("./representation").StructureRepresentationProvider<{
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             adjustCylinderLength: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
             tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-            excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+            includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+            excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             aromaticBonds: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"off" | "symmetric" | "offset">;
+            multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"off" | "offset" | "symmetric">;
             linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticDashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -142,14 +152,14 @@ export declare namespace StructureRepresentationRegistry {
             resolution: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             radiusOffset: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             smoothness: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
             tryUseGpu: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
+            smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 resolutionFactor: number;
                 sampleStride: number;
-            }>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off">>;
+            }>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto">>;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -164,7 +174,7 @@ export declare namespace StructureRepresentationRegistry {
             resolution: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             radiusOffset: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             smoothness: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -197,11 +207,11 @@ export declare namespace StructureRepresentationRegistry {
             backgroundMargin: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             backgroundColor: import("../../mol-util/param-definition").ParamDefinition.Color;
             backgroundOpacity: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            level: import("../../mol-util/param-definition").ParamDefinition.Select<"residue" | "chain" | "element">;
+            level: import("../../mol-util/param-definition").ParamDefinition.Select<"residue" | "element" | "chain">;
             chainScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             residueScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             elementScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             borderWidth: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -222,10 +232,10 @@ export declare namespace StructureRepresentationRegistry {
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
         }, "label">;
         line: import("./representation").StructureRepresentationProvider<{
-            multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"off" | "symmetric" | "offset">;
+            multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"off" | "offset" | "symmetric">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
             lineSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -235,12 +245,13 @@ export declare namespace StructureRepresentationRegistry {
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
             pointSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"square" | "circle" | "fuzzy">;
-            includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-            excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+            pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"fuzzy" | "square" | "circle">;
+            includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+            excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
             aromaticBonds: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            aromaticDashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             dashCount: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "line">;
         'molecular-surface': import("./representation").StructureRepresentationProvider<{
@@ -252,14 +263,14 @@ export declare namespace StructureRepresentationRegistry {
             probeRadius: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             resolution: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             probePositions: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             lineSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
-            smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
+            smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 resolutionFactor: number;
                 sampleStride: number;
-            }>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off">>;
+            }>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto">>;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -270,7 +281,7 @@ export declare namespace StructureRepresentationRegistry {
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"orientation-ellipsoid-mesh">;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -284,10 +295,10 @@ export declare namespace StructureRepresentationRegistry {
             pointSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"square" | "circle" | "fuzzy">;
+            pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"fuzzy" | "square" | "circle">;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
         }, "point">;
@@ -295,7 +306,7 @@ export declare namespace StructureRepresentationRegistry {
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-tube">;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -313,7 +324,7 @@ export declare namespace StructureRepresentationRegistry {
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
-            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "atomic" | "gaussians">;
+            unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;

package/lib/mol-repr/structure/registry.js

@@ -26,7 +26,7 @@ var StructureRepresentationRegistry = /** @class */ (function (_super) {
         var _this = _super.call(this) || this;
         objectForEach(StructureRepresentationRegistry.BuiltIn, function (p, k) {
             if (p.name !== k)
-                throw new Error("Fix BuiltInStructureRepresentations to have matching names. " + p.name + " " + k);
+                throw new Error("Fix BuiltInStructureRepresentations to have matching names. ".concat(p.name, " ").concat(k));
             _this.add(p);
         });
         return _this;

package/lib/mol-repr/structure/registry.js.map

@@ -1 +1 @@
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package/lib/mol-repr/structure/representation/backbone.d.ts

@@ -13,7 +13,7 @@ export declare const BackboneParams: {
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -31,7 +31,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -50,7 +50,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;

package/lib/mol-repr/structure/representation/ball-and-stick.d.ts

@@ -10,20 +10,23 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
 import { Structure } from '../../../mol-model/structure';
 export declare const BallAndStickParams: {
     includeParent: PD.BooleanParam;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
     tryUseImpostor: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
-    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
+    multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
@@ -42,20 +45,23 @@ export declare const BallAndStickParams: {
 export declare type BallAndStickParams = typeof BallAndStickParams;
 export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structure: Structure): {
     includeParent: PD.BooleanParam;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
     tryUseImpostor: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
-    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
+    multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
@@ -75,20 +81,23 @@ export declare type BallAndStickRepresentation = StructureRepresentation<BallAnd
 export declare function BallAndStickRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, BallAndStickParams>): BallAndStickRepresentation;
 export declare const BallAndStickRepresentationProvider: StructureRepresentationProvider<{
     includeParent: PD.BooleanParam;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
     tryUseImpostor: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
-    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
+    multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;

package/lib/mol-repr/structure/representation/carbohydrate.d.ts

@@ -14,12 +14,15 @@ export declare const CarbohydrateParams: {
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -39,12 +42,15 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -65,12 +71,15 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;

package/lib/mol-repr/structure/representation/cartoon.d.ts

@@ -11,7 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../rep
 export declare const CartoonParams: {
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -25,13 +25,14 @@ export declare const CartoonParams: {
     aspectRatio: PD.Numeric;
     arrowFactor: PD.Numeric;
     tubularHelices: PD.BooleanParam;
+    helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
     linearSegments: PD.Numeric;
 };
 export declare type CartoonParams = typeof CartoonParams;
 export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: Structure): {
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -45,6 +46,7 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
     aspectRatio: PD.Numeric;
     arrowFactor: PD.Numeric;
     tubularHelices: PD.BooleanParam;
+    helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
     linearSegments: PD.Numeric;
 };
 export declare type CartoonRepresentation = StructureRepresentation<CartoonParams>;
@@ -52,7 +54,7 @@ export declare function CartoonRepresentation(ctx: RepresentationContext, getPar
 export declare const CartoonRepresentationProvider: StructureRepresentationProvider<{
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -66,5 +68,6 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
     aspectRatio: PD.Numeric;
     arrowFactor: PD.Numeric;
     tubularHelices: PD.BooleanParam;
+    helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
     linearSegments: PD.Numeric;
 }, "cartoon">;

package/lib/mol-repr/structure/representation/ellipsoid.d.ts

@@ -11,19 +11,22 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../../
 export declare const EllipsoidParams: {
     includeParent: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     linkCap: PD.BooleanParam;
     visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
     tryUseImpostor: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
-    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
+    multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
@@ -42,19 +45,22 @@ export declare type EllipsoidParams = typeof EllipsoidParams;
 export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure: Structure): {
     includeParent: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     linkCap: PD.BooleanParam;
     visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
     tryUseImpostor: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
-    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
+    multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
@@ -74,19 +80,22 @@ export declare function EllipsoidRepresentation(ctx: RepresentationContext, getP
 export declare const EllipsoidRepresentationProvider: StructureRepresentationProvider<{
     includeParent: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     linkCap: PD.BooleanParam;
     visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
     tryUseImpostor: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
-    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
+    multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;