npm - molstar - Versions diffs - 2.3.5 → 2.3.9 - Mend

molstar 2.3.5 → 2.3.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1658) hide show

package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts CHANGED Viewed

@@ -14,14 +14,17 @@ export declare const IntraUnitBondCylinderParams: {
     tryUseImpostor: PD.BooleanParam;
     includeParent: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
     multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;
@@ -43,14 +46,17 @@ export declare function IntraUnitBondCylinderVisual(materialId: number, structur
     tryUseImpostor: PD.BooleanParam;
     includeParent: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
     multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;

package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.js CHANGED Viewed

@@ -198,6 +198,9 @@ function IntraUnitBondCylinderImpostorVisual(materialId) {
                 newProps.linkSpacing !== currentProps.linkSpacing ||
                 newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
                 newProps.linkCap !== currentProps.linkCap ||
+                newProps.aromaticScale !== currentProps.aromaticScale ||
+                newProps.aromaticSpacing !== currentProps.aromaticSpacing ||
+                newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
                 newProps.dashCount !== currentProps.dashCount ||
                 newProps.dashScale !== currentProps.dashScale ||
                 newProps.dashCap !== currentProps.dashCap ||
@@ -239,6 +242,9 @@ function IntraUnitBondCylinderMeshVisual(materialId) {
                 newProps.linkSpacing !== currentProps.linkSpacing ||
                 newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
                 newProps.linkCap !== currentProps.linkCap ||
+                newProps.aromaticScale !== currentProps.aromaticScale ||
+                newProps.aromaticSpacing !== currentProps.aromaticSpacing ||
+                newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
                 newProps.dashCount !== currentProps.dashCount ||
                 newProps.dashScale !== currentProps.dashScale ||
                 newProps.dashCap !== currentProps.dashCap ||

package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts CHANGED Viewed

@@ -7,13 +7,14 @@ import { ParamDefinition as PD } from '../../../mol-util/param-definition';
 import { UnitsVisual } from '../units-visual';
 export declare const IntraUnitBondLineParams: {
     includeParent: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
-    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
+    excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
     multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
     sizeFactor: PD.Numeric;

package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.js CHANGED Viewed

@@ -135,6 +135,7 @@ function IntraUnitBondLineVisual(materialId) {
             state.createGeometry = (newProps.sizeFactor !== currentProps.sizeFactor ||
                 newProps.linkScale !== currentProps.linkScale ||
                 newProps.linkSpacing !== currentProps.linkSpacing ||
+                newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
                 newProps.dashCount !== currentProps.dashCount ||
                 newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
                 !(0, mol_util_1.arrayEqual)(newProps.includeTypes, currentProps.includeTypes) ||

package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts CHANGED Viewed

@@ -10,6 +10,9 @@ export declare const CarbohydrateLinkParams: {
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;

package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts CHANGED Viewed

@@ -10,6 +10,9 @@ export declare const CarbohydrateTerminalLinkParams: {
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
+    aromaticScale: PD.Numeric;
+    aromaticSpacing: PD.Numeric;
+    aromaticDashCount: PD.Numeric;
     dashCount: PD.Numeric;
     dashScale: PD.Numeric;
     dashCap: PD.BooleanParam;

package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts CHANGED Viewed

@@ -22,7 +22,7 @@ export declare const GaussianDensityVolumeParams: {
     renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
         controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
         list: {
-            kind: "set" | "interpolate";
+            kind: "interpolate" | "set";
             colors: import("../../../mol-util/color/color").ColorListEntry[];
         };
     }>, "volume"> | PD.NamedParams<PD.Normalize<{
@@ -58,7 +58,7 @@ export declare const UnitsGaussianDensityVolumeParams: {
     renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
         controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
         list: {
-            kind: "set" | "interpolate";
+            kind: "interpolate" | "set";
             colors: import("../../../mol-util/color/color").ColorListEntry[];
         };
     }>, "volume"> | PD.NamedParams<PD.Normalize<{

package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts CHANGED Viewed

@@ -12,10 +12,10 @@ export declare const GaussianSurfaceMeshParams: {
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+    }>, "on">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;
@@ -34,10 +34,10 @@ export declare const StructureGaussianSurfaceMeshParams: {
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+    }>, "on">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;
@@ -56,10 +56,10 @@ export declare function GaussianSurfaceVisual(materialId: number, structure: Str
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+    }>, "on">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;
@@ -77,10 +77,10 @@ export declare function StructureGaussianSurfaceVisual(materialId: number, struc
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+    }>, "on">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;

package/lib/commonjs/mol-repr/structure/visual/label-text.js CHANGED Viewed

@@ -60,7 +60,7 @@ function createChainText(ctx, structure, theme, props, text) {
         linear_algebra_1.Vec3.transformMat4(tmpVec, center, unit.conformation.operator.matrix);
         var authId = auth_asym_id(l);
         var labelId = label_asym_id(l);
-        var text_1 = authId === labelId ? labelId : labelId + " [" + authId + "]";
+        var text_1 = authId === labelId ? labelId : "".concat(labelId, " [").concat(authId, "]");
         builder.add(text_1, tmpVec[0], tmpVec[1], tmpVec[2], radius, chainScale, cumulativeUnitElementCount[i]);
     }
     return builder.getText();
@@ -103,7 +103,7 @@ function createResidueText(ctx, structure, theme, props, text) {
             var _a = boundaryHelper.getSphere(), center = _a.center, radius = _a.radius;
             var authSeqId = auth_seq_id(l);
             var compId = label_comp_id(l);
-            var text_2 = compId + " " + authSeqId;
+            var text_2 = "".concat(compId, " ").concat(authSeqId);
             builder.add(text_2, center[0], center[1], center[2], radius, residueScale, groupOffset + start);
         }
     }
@@ -129,7 +129,7 @@ function createElementText(ctx, structure, theme, props, text) {
             pos(l.element, tmpVec);
             var atomId = label_atom_id(l);
             var altId = label_alt_id(l);
-            var text_3 = altId ? atomId + "%" + altId : atomId;
+            var text_3 = altId ? "".concat(atomId, "%").concat(altId) : atomId;
             builder.add(text_3, tmpVec[0], tmpVec[1], tmpVec[2], sizeTheme.size(l), elementScale, groupOffset + j);
         }
     }

package/lib/commonjs/mol-repr/structure/visual/label-text.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts CHANGED Viewed

@@ -6,10 +6,10 @@
 import { ParamDefinition as PD } from '../../../mol-util/param-definition';
 import { UnitsVisual } from '../units-visual';
 export declare const MolecularSurfaceMeshParams: {
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+    }>, "on">>;
     ignoreHydrogens: PD.BooleanParam;
     traceOnly: PD.BooleanParam;
     includeParent: PD.BooleanParam;

package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts CHANGED Viewed

@@ -10,6 +10,7 @@ export declare const PolymerTraceMeshParams: {
     aspectRatio: PD.Numeric;
     arrowFactor: PD.Numeric;
     tubularHelices: PD.BooleanParam;
+    helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
     detail: PD.Numeric;
     linearSegments: PD.Numeric;
     radialSegments: PD.Numeric;
@@ -19,6 +20,7 @@ export declare const DefaultPolymerTraceMeshProps: PD.Values<{
     aspectRatio: PD.Numeric;
     arrowFactor: PD.Numeric;
     tubularHelices: PD.BooleanParam;
+    helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
     detail: PD.Numeric;
     linearSegments: PD.Numeric;
     radialSegments: PD.Numeric;
@@ -29,6 +31,7 @@ export declare const PolymerTraceParams: {
     aspectRatio: PD.Numeric;
     arrowFactor: PD.Numeric;
     tubularHelices: PD.BooleanParam;
+    helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
     detail: PD.Numeric;
     linearSegments: PD.Numeric;
     radialSegments: PD.Numeric;

package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.js CHANGED Viewed

@@ -25,8 +25,9 @@ var geometry_1 = require("../../../mol-math/geometry");
 exports.PolymerTraceMeshParams = {
     sizeFactor: param_definition_1.ParamDefinition.Numeric(0.2, { min: 0, max: 10, step: 0.01 }),
     aspectRatio: param_definition_1.ParamDefinition.Numeric(5, { min: 0.1, max: 10, step: 0.1 }),
-    arrowFactor: param_definition_1.ParamDefinition.Numeric(1.5, { min: 0, max: 3, step: 0.1 }),
-    tubularHelices: param_definition_1.ParamDefinition.Boolean(false),
+    arrowFactor: param_definition_1.ParamDefinition.Numeric(1.5, { min: 0, max: 3, step: 0.1 }, { description: 'Size factor for sheet arrows' }),
+    tubularHelices: param_definition_1.ParamDefinition.Boolean(false, { description: 'Draw alpha helices as tubes' }),
+    helixProfile: param_definition_1.ParamDefinition.Select('elliptical', param_definition_1.ParamDefinition.arrayToOptions(['elliptical', 'rounded', 'square']), { description: 'Protein and nucleic helix trace profile' }),
     detail: param_definition_1.ParamDefinition.Numeric(0, { min: 0, max: 3, step: 1 }, base_1.BaseGeometry.CustomQualityParamInfo),
     linearSegments: param_definition_1.ParamDefinition.Numeric(8, { min: 1, max: 48, step: 1 }, base_1.BaseGeometry.CustomQualityParamInfo),
     radialSegments: param_definition_1.ParamDefinition.Numeric(16, { min: 2, max: 56, step: 2 }, base_1.BaseGeometry.CustomQualityParamInfo)
@@ -34,11 +35,10 @@ exports.PolymerTraceMeshParams = {
 exports.DefaultPolymerTraceMeshProps = param_definition_1.ParamDefinition.getDefaultValues(exports.PolymerTraceMeshParams);
 var tmpV1 = (0, linear_algebra_1.Vec3)();
 function createPolymerTraceMesh(ctx, unit, structure, theme, props, mesh) {
-    var _a, _b, _c;
     var polymerElementCount = unit.polymerElements.length;
     if (!polymerElementCount)
         return mesh_1.Mesh.createEmpty(mesh);
-    var sizeFactor = props.sizeFactor, detail = props.detail, linearSegments = props.linearSegments, radialSegments = props.radialSegments, aspectRatio = props.aspectRatio, arrowFactor = props.arrowFactor, tubularHelices = props.tubularHelices;
+    var sizeFactor = props.sizeFactor, detail = props.detail, linearSegments = props.linearSegments, radialSegments = props.radialSegments, aspectRatio = props.aspectRatio, arrowFactor = props.arrowFactor, tubularHelices = props.tubularHelices, helixProfile = props.helixProfile;
     var vertexCount = linearSegments * radialSegments * polymerElementCount + (radialSegments + 1) * polymerElementCount * 2;
     var builderState = mesh_builder_1.MeshBuilder.createState(vertexCount, vertexCount / 10, mesh);
     var isCoarse = structure_1.Unit.isCoarse(unit);
@@ -121,9 +121,6 @@ function createPolymerTraceMesh(ctx, unit, structure, theme, props, mesh) {
                 h0 = w0 * aspectRatio;
                 h1 = w1 * aspectRatio;
                 h2 = w2 * aspectRatio;
-                _a = [h0, w0], w0 = _a[0], h0 = _a[1];
-                _b = [h1, w1], w1 = _b[0], h1 = _b[1];
-                _c = [h2, w2], w2 = _c[0], h2 = _c[1];
             }
             else {
                 h0 = w0;
@@ -131,22 +128,31 @@ function createPolymerTraceMesh(ctx, unit, structure, theme, props, mesh) {
                 h2 = w2;
             }
             (0, polymer_1.interpolateSizes)(state, w0, w1, w2, h0, h1, h2, shift);
+            var _a = isNucleicType && !v.isCoarseBackbone ? [binormalVectors, normalVectors] : [normalVectors, binormalVectors], normals = _a[0], binormals = _a[1];
+            if (isNucleicType && !v.isCoarseBackbone) {
+                // TODO: find a cleaner way to swap normal and binormal for nucleic types
+                for (var i_1 = 0, il = normals.length; i_1 < il; i_1++)
+                    normals[i_1] *= -1;
+            }
             if (radialSegments === 2) {
                 if (isNucleicType && !v.isCoarseBackbone) {
-                    // TODO find a cleaner way to swap normal and binormal for nucleic types
-                    for (var i_1 = 0, il = binormalVectors.length; i_1 < il; i_1++)
-                        binormalVectors[i_1] *= -1;
-                    (0, ribbon_1.addRibbon)(builderState, curvePoints, binormalVectors, normalVectors, segmentCount, heightValues, widthValues, 0);
+                    (0, ribbon_1.addRibbon)(builderState, curvePoints, normals, binormals, segmentCount, heightValues, widthValues, 0);
                 }
                 else {
-                    (0, ribbon_1.addRibbon)(builderState, curvePoints, normalVectors, binormalVectors, segmentCount, widthValues, heightValues, 0);
+                    (0, ribbon_1.addRibbon)(builderState, curvePoints, normals, binormals, segmentCount, widthValues, heightValues, 0);
                 }
             }
             else if (radialSegments === 4) {
-                (0, sheet_1.addSheet)(builderState, curvePoints, normalVectors, binormalVectors, segmentCount, widthValues, heightValues, 0, startCap, endCap);
+                (0, sheet_1.addSheet)(builderState, curvePoints, normals, binormals, segmentCount, widthValues, heightValues, 0, startCap, endCap);
+            }
+            else if (h1 === w1) {
+                (0, tube_1.addTube)(builderState, curvePoints, normals, binormals, segmentCount, radialSegments, widthValues, heightValues, startCap, endCap, 'elliptical');
+            }
+            else if (helixProfile === 'square') {
+                (0, sheet_1.addSheet)(builderState, curvePoints, normals, binormals, segmentCount, widthValues, heightValues, 0, startCap, endCap);
             }
             else {
-                (0, tube_1.addTube)(builderState, curvePoints, normalVectors, binormalVectors, segmentCount, radialSegments, widthValues, heightValues, startCap, endCap);
+                (0, tube_1.addTube)(builderState, curvePoints, normals, binormals, segmentCount, radialSegments, widthValues, heightValues, startCap, endCap, helixProfile);
             }
         }
         ++i;
@@ -171,7 +177,8 @@ function PolymerTraceVisual(materialId) {
                 newProps.linearSegments !== currentProps.linearSegments ||
                 newProps.radialSegments !== currentProps.radialSegments ||
                 newProps.aspectRatio !== currentProps.aspectRatio ||
-                newProps.arrowFactor !== currentProps.arrowFactor);
+                newProps.arrowFactor !== currentProps.arrowFactor ||
+                newProps.helixProfile !== currentProps.helixProfile);
             var secondaryStructureHash = secondary_structure_1.SecondaryStructureProvider.get(newStructureGroup.structure).version;
             if (state.info.secondaryStructureHash !== secondaryStructureHash) {
                 state.createGeometry = true;

package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.js CHANGED Viewed

@@ -82,7 +82,7 @@ function createPolymerTubeMesh(ctx, unit, structure, theme, props, mesh) {
             (0, sheet_1.addSheet)(builderState, curvePoints, normalVectors, binormalVectors, segmentCount, widthValues, heightValues, 0, startCap, endCap);
         }
         else {
-            (0, tube_1.addTube)(builderState, curvePoints, normalVectors, binormalVectors, segmentCount, radialSegments, widthValues, heightValues, startCap, endCap);
+            (0, tube_1.addTube)(builderState, curvePoints, normalVectors, binormalVectors, segmentCount, radialSegments, widthValues, heightValues, startCap, endCap, 'elliptical');
         }
         ++i;
     }

package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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