molstar 2.3.5 → 2.3.9
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +176 -176
- package/build/viewer/embedded.html +43 -43
- package/build/viewer/index.html +94 -94
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/embedded.html +43 -43
- package/lib/apps/viewer/index.d.ts +290 -1
- package/lib/apps/viewer/index.html +94 -94
- package/lib/apps/viewer/index.js +91 -5
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/viewer/index.d.ts +289 -0
- package/lib/commonjs/apps/viewer/index.js +91 -5
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/index.js +0 -0
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.js +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.js +1 -1
- package/lib/commonjs/extensions/cellpack/curve.d.ts +2 -2
- package/lib/commonjs/extensions/cellpack/curve.js +2 -2
- package/lib/commonjs/extensions/cellpack/data.d.ts +32 -0
- package/lib/commonjs/extensions/cellpack/index.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/index.js +1 -1
- package/lib/commonjs/extensions/cellpack/model.d.ts +5 -3
- package/lib/commonjs/extensions/cellpack/model.js +203 -65
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/preset.d.ts +2 -1
- package/lib/commonjs/extensions/cellpack/preset.js +12 -15
- package/lib/commonjs/extensions/cellpack/preset.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/property.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/property.js +1 -1
- package/lib/commonjs/extensions/cellpack/representation.d.ts +53 -0
- package/lib/commonjs/extensions/cellpack/representation.js +47 -0
- package/lib/commonjs/extensions/cellpack/representation.js.map +1 -0
- package/lib/commonjs/extensions/cellpack/state.d.ts +16 -5
- package/lib/commonjs/extensions/cellpack/state.js +234 -27
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.d.ts +3 -1
- package/lib/commonjs/extensions/cellpack/util.js +34 -6
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +2 -2
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +3 -3
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +5 -5
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +4 -4
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.d.ts +12 -12
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +15 -0
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
- package/lib/commonjs/mol-canvas3d/canvas3d.js +3 -3
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js +19 -11
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +57 -15
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.d.ts +9 -0
- package/lib/commonjs/mol-gl/_spec/gl.js +33 -0
- package/lib/commonjs/mol-gl/_spec/gl.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +5 -5
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/image.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/renderer.spec.d.ts +7 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +7 -45
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/spheres.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +6 -4
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/extensions.js +5 -1
- package/lib/commonjs/mol-gl/webgl/extensions.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +2 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/shader.js +3 -3
- package/lib/commonjs/mol-gl/webgl/shader.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/state.d.ts +4 -1
- package/lib/commonjs/mol-gl/webgl/state.js +25 -1
- package/lib/commonjs/mol-gl/webgl/state.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/texture.js +2 -2
- package/lib/commonjs/mol-gl/webgl/texture.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/uniform.js +2 -2
- package/lib/commonjs/mol-gl/webgl/uniform.js.map +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js.map +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js.map +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/data-model.js +7 -7
- package/lib/commonjs/mol-io/reader/cif/data-model.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +12 -12
- package/lib/commonjs/mol-io/reader/cif/schema.js +7 -7
- package/lib/commonjs/mol-io/reader/cif/schema.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/text/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/cif/text/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/dcd/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/dcd/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/ply/schema.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/ply/schema.js +1 -1
- package/lib/commonjs/mol-io/reader/ply/schema.js.map +1 -1
- package/lib/commonjs/mol-io/reader/result.js +1 -1
- package/lib/commonjs/mol-io/reader/result.js.map +1 -1
- package/lib/commonjs/mol-io/writer/cif/encoder/text.js +3 -3
- package/lib/commonjs/mol-io/writer/cif/encoder/text.js.map +1 -1
- package/lib/commonjs/mol-io/writer/cif/encoder.js +5 -5
- package/lib/commonjs/mol-io/writer/cif/encoder.js.map +1 -1
- package/lib/commonjs/mol-io/writer/mol/encoder.js +4 -4
- package/lib/commonjs/mol-io/writer/mol/encoder.js.map +1 -1
- package/lib/commonjs/mol-io/writer/mol2/encoder.js +6 -6
- package/lib/commonjs/mol-io/writer/mol2/encoder.js.map +1 -1
- package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js +1 -1
- package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js.map +1 -1
- package/lib/commonjs/mol-math/geometry/primitives/axes3d.d.ts +2 -1
- package/lib/commonjs/mol-math/geometry/primitives/axes3d.js +9 -2
- package/lib/commonjs/mol-math/geometry/primitives/axes3d.js.map +1 -1
- package/lib/commonjs/mol-math/geometry/spacegroup/construction.js +8 -8
- package/lib/commonjs/mol-math/geometry/spacegroup/construction.js.map +1 -1
- package/lib/commonjs/mol-math/geometry/spacegroup/tables.js +1 -1
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+
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@@ -7,15 +7,16 @@ import { ParamDefinition as PD } from '../../../mol-util/param-definition';
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7
7
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import { ComplexVisual } from '../complex-visual';
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8
8
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export declare const InterUnitBondLineParams: {
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9
9
|
includeParent: PD.BooleanParam;
|
|
10
|
-
includeTypes: PD.MultiSelect<"covalent" | "
|
|
11
|
-
excludeTypes: PD.MultiSelect<"covalent" | "
|
|
10
|
+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
11
|
+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
12
12
|
ignoreHydrogens: PD.BooleanParam;
|
|
13
13
|
aromaticBonds: PD.BooleanParam;
|
|
14
|
-
multipleBonds: PD.Select<"off" | "
|
|
14
|
+
multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
|
|
15
15
|
linkScale: PD.Numeric;
|
|
16
16
|
linkSpacing: PD.Numeric;
|
|
17
|
+
aromaticDashCount: PD.Numeric;
|
|
17
18
|
dashCount: PD.Numeric;
|
|
18
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
19
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
19
20
|
sizeFactor: PD.Numeric;
|
|
20
21
|
lineSizeAttenuation: PD.BooleanParam;
|
|
21
22
|
alpha: PD.Numeric;
|
|
@@ -114,6 +114,7 @@ export function InterUnitBondLineVisual(materialId) {
|
|
|
114
114
|
state.createGeometry = (newProps.sizeFactor !== currentProps.sizeFactor ||
|
|
115
115
|
newProps.linkScale !== currentProps.linkScale ||
|
|
116
116
|
newProps.linkSpacing !== currentProps.linkSpacing ||
|
|
117
|
+
newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
|
|
117
118
|
newProps.dashCount !== currentProps.dashCount ||
|
|
118
119
|
newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
|
|
119
120
|
!arrayEqual(newProps.includeTypes, currentProps.includeTypes) ||
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
{"version":3,"file":"bond-inter-unit-line.js","sourceRoot":"","sources":["../../../../src/mol-repr/structure/visual/bond-inter-unit-line.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAE3E,OAAO,EAAa,gBAAgB,EAAE,IAAI,EAAQ,MAAM,8BAA8B,CAAC;AAEvF,OAAO,EAAE,IAAI,EAAE,MAAM,kCAAkC,CAAC;AACxD,OAAO,EAAE,QAAQ,EAAE,UAAU,EAAE,MAAM,mBAAmB,CAAC;AACzD,OAAO,EAAa,eAAe,EAAoB,MAAM,aAAa,CAAC;AAC3E,OAAO,EAAiB,kBAAkB,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AAE1F,OAAO,EAAE,QAAQ,EAAE,MAAM,0CAA0C,CAAC;AACpE,OAAO,EAAE,YAAY,EAAE,gBAAgB,EAAE,aAAa,EAAE,cAAc,EAAE,uBAAuB,EAAE,MAAM,aAAa,CAAC;AACrH,OAAO,EAAE,KAAK,EAAE,MAAM,uCAAuC,CAAC;AAC9D,OAAO,EAAE,QAAQ,EAAE,MAAM,4BAA4B,CAAC;AAEtD,IAAM,eAAe,GAAG,IAAI,IAAI,CAAC,mBAAmB,EAAE,CAAC;AACvD,SAAS,cAAc,CAAC,GAAS,EAAE,SAAoB,EAAE,IAAiB,EAAE,KAAiC;IACzG,eAAe,CAAC,UAAU,CAAC,SAAS,EAAE,IAAI,EAAE,KAAK,CAAC,CAAC;IACnD,OAAO,eAAe,CAAC,OAAO,EAAE;QAC5B,IAAM,EAAE,GAAG,eAAe,CAAC,IAAI,EAAE,CAAC;QAClC,EAAE,CAAC,SAAS,CAAC,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC,SAAS,CAAC,QAAQ,CAAC,EAAE,CAAC,UAAU,CAAC,EAAE,GAAG,CAAC,CAAC;QAC9E,OAAO,GAAG,CAAC;KACd;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,wBAAwB,CAAC,GAAkB,EAAE,SAAoB,EAAE,KAAY,EAAE,KAAyC,EAAE,KAAa;IAC9I,IAAM,KAAK,GAAG,SAAS,CAAC,cAAc,CAAC;IAC/B,IAAA,SAAS,GAAY,KAAK,UAAjB,EAAE,KAAK,GAAK,KAAK,MAAV,CAAW;IAEnC,IAAI,CAAC,SAAS;QAAE,OAAO,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC;IAExC,IAAA,UAAU,GAAmC,KAAK,WAAxC,EAAE,aAAa,GAAoB,KAAK,cAAzB,EAAE,aAAa,GAAK,KAAK,cAAV,CAAW;IAE3D,IAAM,KAAK,GAAG,aAAa,KAAK,KAAK,CAAC;IACtC,IAAM,WAAW,GAAG,aAAa,KAAK,WAAW,CAAC;IAElD,IAAM,GAAG,GAAG,IAAI,EAAE,CAAC;IACnB,IAAM,GAAG,GAAG,gBAAgB,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC;IAE/C,IAAM,YAAY,GAAqB;QACnC,SAAS,EAAE,SAAS;QACpB,iBAAiB,EAAE,UAAC,SAAiB;YACjC,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,IAAI,KAAkB,EAAE,KAAkB,CAAC;YAC3C,IAAI,MAAkC,EAAE,MAAkC,CAAC;YAC3E,IAAI,CAAC,CAAC,KAAK,GAAG,CAAC,CAAC,KAAK,EAAE;gBACnB,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;gBACtD,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;gBACtD,MAAM,GAAG,CAAC,CAAC,MAAM,CAAC;gBAClB,MAAM,GAAG,CAAC,CAAC,MAAM,CAAC;aACrB;iBAAM,IAAI,CAAC,CAAC,KAAK,GAAG,CAAC,CAAC,KAAK,EAAE;gBAC1B,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;gBACtD,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;gBACtD,MAAM,GAAG,CAAC,CAAC,MAAM,CAAC;gBAClB,MAAM,GAAG,CAAC,CAAC,MAAM,CAAC;aACrB;iBAAM;gBACH,MAAM,IAAI,KAAK,CAAC,wCAAwC,CAAC,CAAC;aAC7D;YACD,OAAO,cAAc,CAAC,GAAG,EAAE,SAAS,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,cAAc,CAAC,GAAG,EAAE,SAAS,EAAE,KAAK,EAAE,MAAM,CAAC,CAAC;QAC1G,CAAC;QACD,QAAQ,EAAE,UAAC,IAAU,EAAE,IAAU,EAAE,SAAiB;YAChD,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,EAAE,CAAC,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,IAAI,CAAC,CAAC;YACtD,EAAE,CAAC,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,IAAI,CAAC,CAAC;QAC1D,CAAC;QACD,KAAK,EAAE,UAAC,SAAiB;YACrB,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC;YACvC,IAAM,CAAC,GAAG,QAAQ,CAAC,MAAM,CAAC,KAAK,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;YACvD,IAAI,QAAQ,CAAC,EAAE,CAAC,CAAC,+BAAqC,IAAI,QAAQ,CAAC,EAAE,CAAC,CAAC,uBAA6B,EAAE;gBAClG,uEAAuE;gBACvE,sBAAwB;aAC3B;iBAAM,IAAI,CAAC,KAAK,CAAC,EAAE;gBAChB,OAAO,KAAK,CAAC,CAAC,eAAiB,CAAC;oBAC5B,WAAW,CAAC,CAAC,gBAAkB,CAAC;4CACN,CAAC;aAClC;iBAAM,IAAI,aAAa,IAAI,QAAQ,CAAC,EAAE,CAAC,CAAC,oBAAyB,EAAE;gBAChE,wBAA0B;aAC7B;YAED,OAAO,CAAC,CAAC,KAAK,CAAC,IAAI,KAAK,CAAC,CAAC,CAAC,eAAiB,CAAC;gBACzC,WAAW,CAAC,CAAC,gBAAkB,CAAC;wCACN,CAAC;QACnC,CAAC;QACD,MAAM,EAAE,UAAC,SAAiB;YACtB,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,GAAG,CAAC,SAAS,GAAG,SAAS,CAAC;YAC1B,GAAG,CAAC,IAAI,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,GAAG,CAAC,OAAO,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;YAC1C,IAAM,KAAK,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;YACnC,GAAG,CAAC,IAAI,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,GAAG,CAAC,OAAO,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;YAC1C,IAAM,KAAK,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;YACnC,OAAO,IAAI,CAAC,GAAG,CAAC,KAAK,EAAE,KAAK,CAAC,GAAG,UAAU,CAAC;QAC/C,CAAC;QACD,MAAM,EAAE,uBAAuB,CAAC,SAAS,EAAE,KAAK,CAAC;KACpD,CAAC;IAEF,IAAM,CAAC,GAAG,eAAe,CAAC,GAAG,EAAE,YAAY,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;IAEnD,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAC5B,IAAM,MAAM,GAAG,QAAQ,CAAC,MAAM,CAAC,QAAQ,EAAE,EAAE,CAAC,KAAK,aAAL,KAAK,cAAL,KAAK,GAAI,SAAS,CAAC,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC;IACvG,CAAC,CAAC,iBAAiB,CAAC,MAAM,CAAC,CAAC;IAE5B,OAAO,CAAC,CAAC;AACb,CAAC;AAED,MAAM,CAAC,IAAM,uBAAuB,kCAC7B,kBAAkB,GAClB,cAAc,KACjB,aAAa,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC,GACnC,CAAC;AAGF,MAAM,UAAU,uBAAuB,CAAC,UAAkB;IACtD,OAAO,kBAAkB,CAA0B;QAC/C,YAAY,EAAE,EAAE,CAAC,gBAAgB,CAAC,uBAAuB,CAAC;QAC1D,cAAc,EAAE,wBAAwB;QACxC,sBAAsB,EAAE,YAAY,CAAC,aAAa;QAClD,OAAO,EAAE,gBAAgB;QACzB,YAAY,EAAE,aAAa;QAC3B,cAAc,EAAE,UAAC,K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@@ -14,20 +14,23 @@ export declare const IntraUnitBondCylinderParams: {
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14
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tryUseImpostor: PD.BooleanParam;
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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-
includeTypes: PD.MultiSelect<"covalent" | "
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-
excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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-
multipleBonds: PD.Select<"off" | "
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multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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linkCap: PD.BooleanParam;
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aromaticScale: PD.Numeric;
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aromaticSpacing: PD.Numeric;
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aromaticDashCount: PD.Numeric;
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dashCount: PD.Numeric;
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dashScale: PD.Numeric;
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dashCap: PD.BooleanParam;
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stubCap: PD.BooleanParam;
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radialSegments: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"spheres" | "
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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doubleSided: PD.BooleanParam;
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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@@ -43,20 +46,23 @@ export declare function IntraUnitBondCylinderVisual(materialId: number, structur
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46
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tryUseImpostor: PD.BooleanParam;
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44
47
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includeParent: PD.BooleanParam;
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45
48
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adjustCylinderLength: PD.BooleanParam;
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46
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-
includeTypes: PD.MultiSelect<"covalent" | "
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47
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-
excludeTypes: PD.MultiSelect<"covalent" | "
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49
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+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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50
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+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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48
51
|
ignoreHydrogens: PD.BooleanParam;
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49
52
|
aromaticBonds: PD.BooleanParam;
|
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50
|
-
multipleBonds: PD.Select<"off" | "
|
|
53
|
+
multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
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51
54
|
linkScale: PD.Numeric;
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52
55
|
linkSpacing: PD.Numeric;
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53
56
|
linkCap: PD.BooleanParam;
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57
|
+
aromaticScale: PD.Numeric;
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58
|
+
aromaticSpacing: PD.Numeric;
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59
|
+
aromaticDashCount: PD.Numeric;
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54
60
|
dashCount: PD.Numeric;
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55
61
|
dashScale: PD.Numeric;
|
|
56
62
|
dashCap: PD.BooleanParam;
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|
57
63
|
stubCap: PD.BooleanParam;
|
|
58
64
|
radialSegments: PD.Numeric;
|
|
59
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
65
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
60
66
|
doubleSided: PD.BooleanParam;
|
|
61
67
|
ignoreLight: PD.BooleanParam;
|
|
62
68
|
xrayShaded: PD.BooleanParam;
|
|
@@ -194,6 +194,9 @@ export function IntraUnitBondCylinderImpostorVisual(materialId) {
|
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|
194
194
|
newProps.linkSpacing !== currentProps.linkSpacing ||
|
|
195
195
|
newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
|
|
196
196
|
newProps.linkCap !== currentProps.linkCap ||
|
|
197
|
+
newProps.aromaticScale !== currentProps.aromaticScale ||
|
|
198
|
+
newProps.aromaticSpacing !== currentProps.aromaticSpacing ||
|
|
199
|
+
newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
|
|
197
200
|
newProps.dashCount !== currentProps.dashCount ||
|
|
198
201
|
newProps.dashScale !== currentProps.dashScale ||
|
|
199
202
|
newProps.dashCap !== currentProps.dashCap ||
|
|
@@ -234,6 +237,9 @@ export function IntraUnitBondCylinderMeshVisual(materialId) {
|
|
|
234
237
|
newProps.linkSpacing !== currentProps.linkSpacing ||
|
|
235
238
|
newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
|
|
236
239
|
newProps.linkCap !== currentProps.linkCap ||
|
|
240
|
+
newProps.aromaticScale !== currentProps.aromaticScale ||
|
|
241
|
+
newProps.aromaticSpacing !== currentProps.aromaticSpacing ||
|
|
242
|
+
newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
|
|
237
243
|
newProps.dashCount !== currentProps.dashCount ||
|
|
238
244
|
newProps.dashScale !== currentProps.dashScale ||
|
|
239
245
|
newProps.dashCap !== currentProps.dashCap ||
|
|
@@ -1 +1 @@
|
|
|
1
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-
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1
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+
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@@ -7,15 +7,16 @@ import { ParamDefinition as PD } from '../../../mol-util/param-definition';
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7
7
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import { UnitsVisual } from '../units-visual';
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8
8
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export declare const IntraUnitBondLineParams: {
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9
9
|
includeParent: PD.BooleanParam;
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10
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-
includeTypes: PD.MultiSelect<"covalent" | "
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11
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-
excludeTypes: PD.MultiSelect<"covalent" | "
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10
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+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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11
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+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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12
12
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ignoreHydrogens: PD.BooleanParam;
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13
13
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aromaticBonds: PD.BooleanParam;
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14
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-
multipleBonds: PD.Select<"off" | "
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14
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+
multipleBonds: PD.Select<"off" | "offset" | "symmetric">;
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15
15
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linkScale: PD.Numeric;
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16
16
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linkSpacing: PD.Numeric;
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17
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+
aromaticDashCount: PD.Numeric;
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17
18
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dashCount: PD.Numeric;
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18
|
-
unitKinds: PD.MultiSelect<"spheres" | "
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19
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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19
20
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sizeFactor: PD.Numeric;
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20
21
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lineSizeAttenuation: PD.BooleanParam;
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21
22
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alpha: PD.Numeric;
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@@ -132,6 +132,7 @@ export function IntraUnitBondLineVisual(materialId) {
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132
132
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state.createGeometry = (newProps.sizeFactor !== currentProps.sizeFactor ||
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133
133
|
newProps.linkScale !== currentProps.linkScale ||
|
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134
134
|
newProps.linkSpacing !== currentProps.linkSpacing ||
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135
|
+
newProps.aromaticDashCount !== currentProps.aromaticDashCount ||
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|
135
136
|
newProps.dashCount !== currentProps.dashCount ||
|
|
136
137
|
newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
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|
137
138
|
!arrayEqual(newProps.includeTypes, currentProps.includeTypes) ||
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@@ -1 +1 @@
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1
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-
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+
{"version":3,"file":"bond-intra-unit-line.js","sourceRoot":"","sources":["../../../../src/mol-repr/structure/visual/bond-intra-unit-line.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAE3E,OAAO,EAAE,IAAI,EAAa,gBAAgB,EAAE,MAAM,8BAA8B,CAAC;AAEjF,OAAO,EAAE,IAAI,EAAE,MAAM,kCAAkC,CAAC;AACxD,OAAO,EAAE,UAAU,EAAE,MAAM,mBAAmB,CAAC;AAC/C,OAAO,EAAa,eAAe,EAAoB,MAAM,aAAa,CAAC;AAC3E,OAAO,EAAe,gBAAgB,EAAE,gBAAgB,EAAE,MAAM,iBAAiB,CAAC;AAElF,OAAO,EAAE,QAAQ,EAAE,MAAM,0CAA0C,CAAC;AACpE,OAAO,EAAE,YAAY,EAAE,cAAc,EAAE,gBAAgB,EAAE,aAAa,EAAE,uBAAuB,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AACrI,OAAO,EAAE,QAAQ,EAAE,MAAM,4BAA4B,CAAC;AACtD,OAAO,EAAE,KAAK,EAAE,MAAM,uCAAuC,CAAC;AAC9D,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,qBAAqB,EAAE,MAAM,yBAAyB,CAAC;AAGhE,sEAAsE;AACtE,IAAM,UAAU,GAAG,QAAQ,CAAC,EAAE,CAAC;AAE/B,SAAS,wBAAwB,CAAC,GAAkB,EAAE,IAAU,EAAE,SAAoB,EAAE,KAAY,EAAE,KAAyC,EAAE,KAAa;IAC1J,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC;IAElD,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAC5B,IAAM,SAAS,GAAG,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC9C,IAAI,KAAK,IAAI,CAAC,SAAS;QAAE,OAAO,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC;IAEzD,IAAM,QAAQ,GAAG,gBAAgB,CAAC,QAAQ,CAAC,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,CAAC;IAEnE,IAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC;IAC/B,IAAM,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC;IACjB,IAAA,SAAS,GAA8B,KAAK,UAAnC,EAAE,CAAC,GAA2B,KAAK,EAAhC,EAAE,CAAC,GAAwB,KAAK,EAA7B,EAAE,SAAS,GAAa,KAAK,UAAlB,EAAE,MAAM,GAAK,KAAK,OAAV,CAAW;IACrD,IAAI,CAAC,SAAS;QAAE,OAAO,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC;IAExC,IAAO,MAAM,GAAoB,SAAS,MAA7B,EAAS,MAAM,GAAK,SAAS,MAAd,CAAe;IAC3C,IAAA,UAAU,GAA+D,KAAK,WAApE,EAAE,aAAa,GAAgD,KAAK,cAArD,EAAE,YAAY,GAAkC,KAAK,aAAvC,EAAE,YAAY,GAAoB,KAAK,aAAzB,EAAE,aAAa,GAAK,KAAK,cAAV,CAAW;IAEvF,IAAM,KAAK,GAAG,aAAa,KAAK,KAAK,CAAC;IACtC,IAAM,WAAW,GAAG,aAAa,KAAK,WAAW,CAAC;IAElD,IAAM,OAAO,GAAG,QAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,OAAO,GAAG,QAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,sBAAsB,GAAG,cAAc,CAAC,OAAO,EAAE,OAAO,oBAAyB,CAAC;IAExF,IAAM,IAAI,GAAG,IAAI,EAAE,CAAC;IACpB,IAAM,GAAG,GAAG,IAAI,CAAC,YAAY,CAAC,iBAAiB,CAAC;IAE1C,IAAA,KAAqD,IAAI,CAAC,KAAK,EAA7D,kBAAkB,wBAAA,EAAE,0BAA0B,gCAAe,CAAC;IAEtE,IAAM,YAAY,GAAqB;QACnC,SAAS,EAAE,SAAS,GAAG,CAAC;QACxB,iBAAiB,EAAE,UAAC,SAAiB;;YACjC,IAAI,EAAE,GAAG,CAAC,CAAC,SAAS,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC;YAEzC,IAAI,EAAE,GAAG,EAAE;gBAAE,KAAW,CAAC,EAAE,EAAE,EAAE,CAAC,EAAlB,EAAE,QAAA,EAAE,EAAE,QAAA,CAAa;YACjC,IAAI,MAAM,CAAC,EAAE,GAAG,CAAC,CAAC,GAAG,MAAM,CAAC,EAAE,CAAC,KAAK,CAAC;gBAAE,KAAW,CAAC,EAAE,EAAE,EAAE,CAAC,EAAlB,EAAE,QAAA,EAAE,EAAE,QAAA,CAAa;YAE3D,IAAM,EAAE,GAAG,kBAAkB,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;YACtC,IAAI,OAAO,GAAG,CAAC,CAAC;YAEhB,KAAK,IAAI,CAAC,GAAG,MAAM,CAAC,EAAE,CAAC,EAAE,EAAE,GAAG,MAAM,CAAC,EAAE,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;gBACvD,IAAM,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBACjB,IAAI,GAAG,KAAK,EAAE,IAAI,GAAG,KAAK,EAAE,EAAE;oBAC1B,IAAI,EAAE,EAAE;wBACJ,IAAM,GAAG,GAAG,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;wBACxC,IAAI,CAAC,GAAG;4BAAE,SAAS;wBAEnB,IAAM,IAAI,GAAG,qBAAqB,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC;wBAC5C,IAAI,IAAI,GAAG,OAAO,EAAE;4BAChB,OAAO,GAAG,IAAI,CAAC;4BACf,GAAG,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC;yBAC5B;qBACJ;yBAAM;wBACH,OAAO,GAAG,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC;qBACnC;iBACJ;aACJ;YACD,OAAO,OAAO,GAAG,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC;QACrC,CAAC;QACD,QAAQ,EAAE,UAAC,IAAU,EAAE,IAAU,EAAE,SAAiB;YAChD,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;YAClC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC;QACtC,CAAC;QACD,KAAK,EAAE,UAAC,SAAiB;YACrB,IAAM,CAAC,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC;YAC5B,IAAM,CAAC,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC;YAC5B,IAAI,UAAU,CAAC,CAAC,+BAAqC,IAAI,UAAU,CAAC,CAAC,uBAA6B,EAAE;gBAChG,uEAAuE;gBACvE,sBAAwB;aAC3B;iBAAM,IAAI,CAAC,KAAK,CAAC,EAAE;gBAChB,OAAO,KAAK,CAAC,CAAC,eAAiB,CAAC;oBAC5B,WAAW,CAAC,CAAC,gBAAkB,CAAC;4CACN,CAAC;aAClC;iBAAM,IAAI,aAAa,EAAE;gBACtB,IAAM,EAAE,GAAG,CAAC,CAAC,SAAS,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC;gBAC3C,IAAM,EAAE,GAAG,0BAA0B,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;gBAC9C,IAAM,EAAE,GAAG,0BAA0B,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;gBAC9C,IAAM,OAAO,GAAG,CAAC,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,qBAAqB,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBAE/D,IAAI,UAAU,CAAC,CAAC,oBAAyB,IAAI,CAAC,OAAO,IAAI,CAAC,sBAAsB,CAAC,EAAE;oBAC/E,IAAI,OAAO,KAAK,CAAC,EAAE;wBACf,gCAAkC;qBACrC;yBAAM;wBACH,wBAA0B;qBAC7B;iBACJ;aACJ;YAED,OAAO,CAAC,CAAC,KAAK,CAAC,IAAI,KAAK,CAAC,CAAC,CAAC,eAAiB,CAAC;gBACzC,WAAW,CAAC,CAAC,gBAAkB,CAAC;wCACN,CAAC;QACnC,CAAC;QACD,MAAM,EAAE,UAAC,SAAiB;YACtB,QAAQ,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC;YAC1C,IAAM,KAAK,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;YACxC,QAAQ,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC;YAC1C,IAAM,KAAK,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;YACxC,OAAO,IAAI,CAAC,GAAG,CAAC,KAAK,EAAE,KAAK,CAAC,GAAG,UAAU,CAAC;QAC/C,CAAC;QACD,MAAM,EAAE,uBAAuB,CAAC,SAAS,EAAE,IAAI,EAAE,KAAK,CAAC;KAC1D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@@ -10,12 +10,15 @@ export declare const CarbohydrateLinkParams: {
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10
10
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linkScale: PD.Numeric;
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11
11
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linkSpacing: PD.Numeric;
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12
12
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linkCap: PD.BooleanParam;
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13
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+
aromaticScale: PD.Numeric;
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14
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+
aromaticSpacing: PD.Numeric;
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15
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+
aromaticDashCount: PD.Numeric;
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13
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dashCount: PD.Numeric;
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14
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dashScale: PD.Numeric;
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dashCap: PD.BooleanParam;
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stubCap: PD.BooleanParam;
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radialSegments: PD.Numeric;
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18
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-
unitKinds: PD.MultiSelect<"spheres" | "
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21
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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19
22
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -8,7 +8,7 @@ import { ComplexVisual } from '../representation';
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8
8
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export declare const CarbohydrateSymbolParams: {
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9
9
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detail: PD.Numeric;
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10
10
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sizeFactor: PD.Numeric;
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11
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-
unitKinds: PD.MultiSelect<"spheres" | "
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11
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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12
12
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includeParent: PD.BooleanParam;
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13
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -10,12 +10,15 @@ export declare const CarbohydrateTerminalLinkParams: {
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10
10
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linkScale: PD.Numeric;
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11
11
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linkSpacing: PD.Numeric;
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12
12
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linkCap: PD.BooleanParam;
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13
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+
aromaticScale: PD.Numeric;
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14
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+
aromaticSpacing: PD.Numeric;
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15
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+
aromaticDashCount: PD.Numeric;
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13
16
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dashCount: PD.Numeric;
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14
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dashScale: PD.Numeric;
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15
18
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dashCap: PD.BooleanParam;
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19
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stubCap: PD.BooleanParam;
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17
20
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radialSegments: PD.Numeric;
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18
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-
unitKinds: PD.MultiSelect<"spheres" | "
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21
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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19
22
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includeParent: PD.BooleanParam;
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20
23
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doubleSided: PD.BooleanParam;
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21
24
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flipSided: PD.BooleanParam;
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@@ -15,7 +15,7 @@ export declare const ElementCrossParams: {
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15
15
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traceOnly: PD.BooleanParam;
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16
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crosses: PD.Select<"all" | "lone">;
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17
17
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crossSize: PD.Numeric;
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18
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-
unitKinds: PD.MultiSelect<"spheres" | "
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18
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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19
19
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includeParent: PD.BooleanParam;
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20
20
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sizeFactor: PD.Numeric;
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21
21
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alpha: PD.Numeric;
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@@ -13,10 +13,10 @@ export declare const ElementPointParams: {
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13
13
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pointSizeAttenuation: PD.BooleanParam;
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14
14
|
ignoreHydrogens: PD.BooleanParam;
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15
15
|
traceOnly: PD.BooleanParam;
|
|
16
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
16
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
17
17
|
includeParent: PD.BooleanParam;
|
|
18
18
|
sizeFactor: PD.Numeric;
|
|
19
|
-
pointStyle: PD.Select<"
|
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19
|
+
pointStyle: PD.Select<"fuzzy" | "square" | "circle">;
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20
20
|
alpha: PD.Numeric;
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21
21
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
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|
22
22
|
};
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@@ -14,7 +14,7 @@ export declare const ElementSphereParams: {
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14
14
|
ignoreHydrogens: PD.BooleanParam;
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15
15
|
traceOnly: PD.BooleanParam;
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16
16
|
tryUseImpostor: PD.BooleanParam;
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17
|
-
unitKinds: PD.MultiSelect<"spheres" | "
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17
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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18
18
|
includeParent: PD.BooleanParam;
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19
19
|
doubleSided: PD.BooleanParam;
|
|
20
20
|
ignoreLight: PD.BooleanParam;
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|
@@ -31,7 +31,7 @@ export declare function ElementSphereVisual(materialId: number, structure: Struc
|
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|
31
31
|
ignoreHydrogens: PD.BooleanParam;
|
|
32
32
|
traceOnly: PD.BooleanParam;
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|
33
33
|
tryUseImpostor: PD.BooleanParam;
|
|
34
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
34
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
35
35
|
includeParent: PD.BooleanParam;
|
|
36
36
|
doubleSided: PD.BooleanParam;
|
|
37
37
|
ignoreLight: PD.BooleanParam;
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|
@@ -13,7 +13,7 @@ export declare const EllipsoidMeshParams: {
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13
13
|
sizeFactor: PD.Numeric;
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|
14
14
|
detail: PD.Numeric;
|
|
15
15
|
ignoreHydrogens: PD.BooleanParam;
|
|
16
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
16
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
17
17
|
includeParent: PD.BooleanParam;
|
|
18
18
|
doubleSided: PD.BooleanParam;
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|
19
19
|
flipSided: PD.BooleanParam;
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|
@@ -13,7 +13,7 @@ export declare const GaussianDensityVolumeParams: {
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|
13
13
|
resolution: PD.Numeric;
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|
14
14
|
radiusOffset: PD.Numeric;
|
|
15
15
|
smoothness: PD.Numeric;
|
|
16
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
16
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
17
17
|
doubleSided: PD.BooleanParam;
|
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18
18
|
flipSided: PD.BooleanParam;
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|
19
19
|
flatShaded: PD.BooleanParam;
|
|
@@ -49,7 +49,7 @@ export declare const UnitsGaussianDensityVolumeParams: {
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|
49
49
|
resolution: PD.Numeric;
|
|
50
50
|
radiusOffset: PD.Numeric;
|
|
51
51
|
smoothness: PD.Numeric;
|
|
52
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
52
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
53
53
|
doubleSided: PD.BooleanParam;
|
|
54
54
|
flipSided: PD.BooleanParam;
|
|
55
55
|
flatShaded: PD.BooleanParam;
|
|
@@ -12,15 +12,15 @@ export declare const GaussianSurfaceMeshParams: {
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|
12
12
|
ignoreHydrogens: PD.BooleanParam;
|
|
13
13
|
tryUseGpu: PD.BooleanParam;
|
|
14
14
|
includeParent: PD.BooleanParam;
|
|
15
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
15
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
|
|
16
16
|
resolutionFactor: number;
|
|
17
17
|
sampleStride: number;
|
|
18
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
18
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "auto">>;
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19
19
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traceOnly: PD.BooleanParam;
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20
20
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resolution: PD.Numeric;
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21
21
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radiusOffset: PD.Numeric;
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22
22
|
smoothness: PD.Numeric;
|
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23
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
23
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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24
24
|
doubleSided: PD.BooleanParam;
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25
25
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flipSided: PD.BooleanParam;
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26
26
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flatShaded: PD.BooleanParam;
|
|
@@ -34,15 +34,15 @@ export declare const StructureGaussianSurfaceMeshParams: {
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34
34
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ignoreHydrogens: PD.BooleanParam;
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35
35
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tryUseGpu: PD.BooleanParam;
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36
36
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includeParent: PD.BooleanParam;
|
|
37
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
37
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
|
|
38
38
|
resolutionFactor: number;
|
|
39
39
|
sampleStride: number;
|
|
40
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
40
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "auto">>;
|
|
41
41
|
traceOnly: PD.BooleanParam;
|
|
42
42
|
resolution: PD.Numeric;
|
|
43
43
|
radiusOffset: PD.Numeric;
|
|
44
44
|
smoothness: PD.Numeric;
|
|
45
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
45
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
46
46
|
doubleSided: PD.BooleanParam;
|
|
47
47
|
flipSided: PD.BooleanParam;
|
|
48
48
|
flatShaded: PD.BooleanParam;
|
|
@@ -56,15 +56,15 @@ export declare function GaussianSurfaceVisual(materialId: number, structure: Str
|
|
|
56
56
|
ignoreHydrogens: PD.BooleanParam;
|
|
57
57
|
tryUseGpu: PD.BooleanParam;
|
|
58
58
|
includeParent: PD.BooleanParam;
|
|
59
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
59
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
|
|
60
60
|
resolutionFactor: number;
|
|
61
61
|
sampleStride: number;
|
|
62
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
62
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "auto">>;
|
|
63
63
|
traceOnly: PD.BooleanParam;
|
|
64
64
|
resolution: PD.Numeric;
|
|
65
65
|
radiusOffset: PD.Numeric;
|
|
66
66
|
smoothness: PD.Numeric;
|
|
67
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
67
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
68
68
|
doubleSided: PD.BooleanParam;
|
|
69
69
|
flipSided: PD.BooleanParam;
|
|
70
70
|
flatShaded: PD.BooleanParam;
|
|
@@ -77,15 +77,15 @@ export declare function StructureGaussianSurfaceVisual(materialId: number, struc
|
|
|
77
77
|
ignoreHydrogens: PD.BooleanParam;
|
|
78
78
|
tryUseGpu: PD.BooleanParam;
|
|
79
79
|
includeParent: PD.BooleanParam;
|
|
80
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
80
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
|
|
81
81
|
resolutionFactor: number;
|
|
82
82
|
sampleStride: number;
|
|
83
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
83
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "auto">>;
|
|
84
84
|
traceOnly: PD.BooleanParam;
|
|
85
85
|
resolution: PD.Numeric;
|
|
86
86
|
radiusOffset: PD.Numeric;
|
|
87
87
|
smoothness: PD.Numeric;
|
|
88
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
88
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
89
89
|
doubleSided: PD.BooleanParam;
|
|
90
90
|
flipSided: PD.BooleanParam;
|
|
91
91
|
flatShaded: PD.BooleanParam;
|
|
@@ -14,7 +14,7 @@ export declare const GaussianWireframeParams: {
|
|
|
14
14
|
resolution: PD.Numeric;
|
|
15
15
|
radiusOffset: PD.Numeric;
|
|
16
16
|
smoothness: PD.Numeric;
|
|
17
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
17
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
18
18
|
alpha: PD.Numeric;
|
|
19
19
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
20
20
|
};
|
|
@@ -11,11 +11,11 @@ export declare const LabelTextParams: {
|
|
|
11
11
|
backgroundMargin: PD.Numeric;
|
|
12
12
|
backgroundColor: PD.Color;
|
|
13
13
|
backgroundOpacity: PD.Numeric;
|
|
14
|
-
level: PD.Select<"residue" | "
|
|
14
|
+
level: PD.Select<"residue" | "element" | "chain">;
|
|
15
15
|
chainScale: PD.Numeric;
|
|
16
16
|
residueScale: PD.Numeric;
|
|
17
17
|
elementScale: PD.Numeric;
|
|
18
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
18
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
19
19
|
includeParent: PD.BooleanParam;
|
|
20
20
|
sizeFactor: PD.Numeric;
|
|
21
21
|
borderWidth: PD.Numeric;
|
|
@@ -56,7 +56,7 @@ function createChainText(ctx, structure, theme, props, text) {
|
|
|
56
56
|
Vec3.transformMat4(tmpVec, center, unit.conformation.operator.matrix);
|
|
57
57
|
var authId = auth_asym_id(l);
|
|
58
58
|
var labelId = label_asym_id(l);
|
|
59
|
-
var text_1 = authId === labelId ? labelId : labelId
|
|
59
|
+
var text_1 = authId === labelId ? labelId : "".concat(labelId, " [").concat(authId, "]");
|
|
60
60
|
builder.add(text_1, tmpVec[0], tmpVec[1], tmpVec[2], radius, chainScale, cumulativeUnitElementCount[i]);
|
|
61
61
|
}
|
|
62
62
|
return builder.getText();
|
|
@@ -99,7 +99,7 @@ function createResidueText(ctx, structure, theme, props, text) {
|
|
|
99
99
|
var _a = boundaryHelper.getSphere(), center = _a.center, radius = _a.radius;
|
|
100
100
|
var authSeqId = auth_seq_id(l);
|
|
101
101
|
var compId = label_comp_id(l);
|
|
102
|
-
var text_2 = compId
|
|
102
|
+
var text_2 = "".concat(compId, " ").concat(authSeqId);
|
|
103
103
|
builder.add(text_2, center[0], center[1], center[2], radius, residueScale, groupOffset + start);
|
|
104
104
|
}
|
|
105
105
|
}
|
|
@@ -125,7 +125,7 @@ function createElementText(ctx, structure, theme, props, text) {
|
|
|
125
125
|
pos(l.element, tmpVec);
|
|
126
126
|
var atomId = label_atom_id(l);
|
|
127
127
|
var altId = label_alt_id(l);
|
|
128
|
-
var text_3 = altId ? atomId
|
|
128
|
+
var text_3 = altId ? "".concat(atomId, "%").concat(altId) : atomId;
|
|
129
129
|
builder.add(text_3, tmpVec[0], tmpVec[1], tmpVec[2], sizeTheme.size(l), elementScale, groupOffset + j);
|
|
130
130
|
}
|
|
131
131
|
}
|