npm - molstar - Versions diffs - 2.3.5 → 2.3.9 - Mend

molstar 2.3.5 → 2.3.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1658) hide show

package/lib/mol-repr/shape/loci/dihedral.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/mol-repr/shape/loci/distance.d.ts CHANGED Viewed

@@ -10,7 +10,7 @@ export interface DistanceData {
     pairs: Loci.Bundle<2>[];
 }
 export declare const DistanceParams: {
-    visuals: PD.MultiSelect<"text" | "lines">;
+    visuals: PD.MultiSelect<"lines" | "text">;
     unitLabel: PD.Text<string>;
     borderWidth: PD.Numeric;
     customText: PD.Text<string>;

package/lib/mol-repr/shape/loci/distance.js CHANGED Viewed

@@ -50,7 +50,7 @@ function setDistanceState(pair, state) {
 }
 var tmpState = getDistanceState();
 function getDistanceName(data, unitLabel) {
-    return data.pairs.length === 1 ? "Distance " + distanceLabel(data.pairs[0], { unitLabel: unitLabel, measureOnly: true }) : data.pairs.length + " Distances";
+    return data.pairs.length === 1 ? "Distance ".concat(distanceLabel(data.pairs[0], { unitLabel: unitLabel, measureOnly: true })) : "".concat(data.pairs.length, " Distances");
 }
 //
 function buildLines(data, props, lines) {
@@ -73,7 +73,7 @@ function buildText(data, props, text) {
     for (var i = 0, il = data.pairs.length; i < il; ++i) {
         setDistanceState(data.pairs[i], tmpState);
         var center = tmpState.center, distance = tmpState.distance, sphereA = tmpState.sphereA, sphereB = tmpState.sphereB;
-        var label = props.customText || distance.toFixed(2) + " " + props.unitLabel;
+        var label = props.customText || "".concat(distance.toFixed(2), " ").concat(props.unitLabel);
         var radius = Math.max(2, sphereA.radius, sphereB.radius);
         var scale = radius / 2;
         builder.add(label, center[0], center[1], center[2], 1, scale, i);

package/lib/mol-repr/shape/loci/distance.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/mol-repr/shape/loci/label.js CHANGED Viewed

@@ -26,7 +26,7 @@ function label(info, condensed) {
     return info.label || lociLabel(info.loci, { hidePrefix: true, htmlStyling: false, condensed: condensed });
 }
 function getLabelName(data) {
-    return data.infos.length === 1 ? label(data.infos[0]) : data.infos.length + " Labels";
+    return data.infos.length === 1 ? label(data.infos[0]) : "".concat(data.infos.length, " Labels");
 }
 //
 function buildText(data, props, text) {

package/lib/mol-repr/shape/loci/label.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"label.js","sourceRoot":"","sources":["../../../../src/mol-repr/shape/loci/label.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,IAAI,EAAE,MAAM,yBAAyB,CAAC;AAE/C,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAC3E,OAAO,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AACxD,OAAO,EAAE,cAAc,EAAqD,MAAM,sBAAsB,CAAC;AACzG,OAAO,EAAE,KAAK,EAAE,MAAM,0BAA0B,CAAC;AACjD,OAAO,EAAE,WAAW,EAAE,MAAM,6CAA6C,CAAC;AAC1E,OAAO,EAAE,QAAQ,EAAE,MAAM,4BAA4B,CAAC;AACtD,OAAO,EAAE,SAAS,EAAE,MAAM,0BAA0B,CAAC;AACrD,OAAO,EAAE,mBAAmB,EAAE,MAAM,UAAU,CAAC;AAM/C,IAAM,UAAU,yBACT,mBAAmB,KACtB,OAAO,EAAE,EAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,GACzD,CAAC;AAGF,IAAM,YAAY,GAAG;IACjB,MAAM,EAAE,UAAC,GAA0B,EAAE,SAA4D,IAAK,OAAA,mBAAmB,CAAC,YAAY,EAAE,IAAI,CAAC,KAAK,EAAE,EAAE,WAAW,EAAE,UAAA,CAAC,IAAI,OAAA,uBAAM,CAAC,KAAE,QAAQ,EAAE,KAAK,IAAG,EAA3B,CAA2B,EAAE,CAAC,EAAhG,CAAgG;CACzM,CAAC;AAEF,MAAM,CAAC,IAAM,WAAW,yBACjB,UAAU,KACb,aAAa,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC,EAC/B,OAAO,EAAE,EAAE,CAAC,WAAW,CAAC,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC,eAAe,CAAC,YAAY,CAAC,CAAC,GACtE,CAAC;AAKF,EAAE;AAEF,IAAM,SAAS,GAAG,QAAQ,EAAE,CAAC;AAE7B,SAAS,KAAK,CAAC,IAAoC,EAAE,SAAiB;IAAjB,0BAAA,EAAA,iBAAiB;IAClE,OAAO,IAAI,CAAC,KAAK,IAAI,SAAS,CAAC,IAAI,CAAC,IAAI,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,WAAW,EAAE,KAAK,EAAE,SAAS,WAAA,EAAE,CAAC,CAAC;AACnG,CAAC;AAED,SAAS,YAAY,CAAC,IAAe;IACjC,OAAO,IAAI,CAAC,KAAK,CAAC,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,UAAG,IAAI,CAAC,KAAK,CAAC,MAAM,YAAS,CAAC;AAC1F,CAAC;AAED,EAAE;AAEF,SAAS,SAAS,CAAC,IAAe,EAAE,KAAiB,EAAE,IAAW;IAC9D,IAAM,OAAO,GAAG,WAAW,CAAC,MAAM,CAAC,KAAK,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,CAAC,CAAC;IACzD,IAAM,WAAW,GAAG,KAAK,CAAC,UAAU,CAAC,IAAI,EAAE,CAAC;IAC5C,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;QACjD,IAAM,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC3B,IAAM,MAAM,GAAG,IAAI,CAAC,iBAAiB,CAAC,IAAI,CAAC,IAAI,EAAE,SAAS,CAAC,CAAC;QAC5D,IAAI,CAAC,MAAM;YAAE,SAAS;QACd,IAAA,MAAM,GAAa,MAAM,OAAnB,EAAE,MAAM,GAAK,MAAM,OAAX,CAAY;QAClC,IAAM,MAAI,GAAG,WAAW,IAAI,KAAK,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC;QAC9C,OAAO,CAAC,GAAG,CAAC,MAAI,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,KAAK,CAAC,aAAa,CAAC,CAAC,CAAC,MAAM,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,KAAK,CAAC,aAAa,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;KAChJ;IACD,OAAO,OAAO,CAAC,OAAO,EAAE,CAAC;AAC7B,CAAC;AAED,SAAS,YAAY,CAAC,GAAmB,EAAE,IAAe,EAAE,KAAiB,EAAE,KAAmB;IAC9F,IAAM,IAAI,GAAG,SAAS,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IAC7D,IAAM,IAAI,GAAG,YAAY,CAAC,IAAI,CAAC,CAAC;IAChC,IAAM,WAAW,GAAG,KAAK,CAAC,UAAU,CAAC,IAAI,EAAE,CAAC;IAC5C,IAAM,QAAQ,GAAG,WAAW;QACxB,CAAC,CAAC,UAAU,OAAe;YACvB,OAAO,WAAW,CAAC;QACvB,CAAC,CAAC,CAAC,CAAC,UAAU,OAAe;QACzB,OAAO,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;IACtC,CAAC,CAAC;IACN,OAAO,KAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,SAAS,EAAf,CAAe,EAAE,cAAM,OAAA,KAAK,CAAC,QAAQ,EAAd,CAAc,EAAE,QAAQ,CAAC,CAAC;AACjG,CAAC;AAKD,MAAM,UAAU,mBAAmB,CAAC,GAA0B,EAAE,SAA6D;IACzH,OAAO,cAAc,CAAC,WAAW,CAAC,OAAO,EAAE,GAAG,EAAE,SAAS,EAAE,cAAc,CAAC,YAAY,EAAE,YAAqE,CAAC,CAAC;AACnK,CAAC"}

package/lib/mol-repr/shape/loci/orientation.d.ts CHANGED Viewed

@@ -1,18 +1,19 @@
 /**
- * Copyright (c) 2019 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ * Copyright (c) 2019-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
-import { Loci } from '../../../mol-model/loci';
 import { ParamDefinition as PD } from '../../../mol-util/param-definition';
 import { Representation, RepresentationParamsGetter, RepresentationContext } from '../../representation';
+import { StructureElement } from '../../../mol-model/structure';
 export interface OrientationData {
-    locis: Loci[];
+    locis: StructureElement.Loci[];
 }
 export declare const OrientationParams: {
-    visuals: PD.MultiSelect<"axes" | "ellipsoid" | "box">;
+    visuals: PD.MultiSelect<"box" | "axes" | "ellipsoid">;
     color: PD.Color;
-    scale: PD.Numeric;
+    scaleFactor: PD.Numeric;
+    radiusScale: PD.Numeric;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
     flatShaded: PD.BooleanParam;

package/lib/mol-repr/shape/loci/orientation.js CHANGED Viewed

@@ -1,10 +1,9 @@
 /**
- * Copyright (c) 2019 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ * Copyright (c) 2019-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 import { __assign } from "tslib";
-import { Loci } from '../../../mol-model/loci';
 import { ParamDefinition as PD } from '../../../mol-util/param-definition';
 import { ColorNames } from '../../../mol-util/color/names';
 import { ShapeRepresentation } from '../representation';
@@ -12,16 +11,18 @@ import { Representation } from '../../representation';
 import { Shape } from '../../../mol-model/shape';
 import { Mesh } from '../../../mol-geo/geometry/mesh/mesh';
 import { MeshBuilder } from '../../../mol-geo/geometry/mesh/mesh-builder';
-import { lociLabel } from '../../../mol-theme/label';
+import { structureElementLociLabelMany } from '../../../mol-theme/label';
 import { addAxes } from '../../../mol-geo/geometry/mesh/builder/axes';
 import { addOrientedBox } from '../../../mol-geo/geometry/mesh/builder/box';
 import { addEllipsoid } from '../../../mol-geo/geometry/mesh/builder/ellipsoid';
 import { Axes3D } from '../../../mol-math/geometry';
 import { Vec3 } from '../../../mol-math/linear-algebra';
 import { MarkerActions } from '../../../mol-util/marker-action';
+import { StructureElement } from '../../../mol-model/structure';
 var SharedParams = {
     color: PD.Color(ColorNames.orange),
-    scale: PD.Numeric(2, { min: 0.1, max: 10, step: 0.1 })
+    scaleFactor: PD.Numeric(1, { min: 0.1, max: 10, step: 0.1 }),
+    radiusScale: PD.Numeric(2, { min: 0.1, max: 10, step: 0.1 })
 };
 var AxesParams = __assign(__assign({}, Mesh.Params), SharedParams);
 var BoxParams = __assign(__assign({}, Mesh.Params), SharedParams);
@@ -31,79 +32,64 @@ var OrientationVisuals = {
     'box': function (ctx, getParams) { return ShapeRepresentation(getBoxShape, Mesh.Utils); },
     'ellipsoid': function (ctx, getParams) { return ShapeRepresentation(getEllipsoidShape, Mesh.Utils); },
 };
-export var OrientationParams = __assign(__assign(__assign({}, AxesParams), BoxParams), { visuals: PD.MultiSelect(['box'], PD.objectToOptions(OrientationVisuals)), color: PD.Color(ColorNames.orange), scale: PD.Numeric(2, { min: 0.1, max: 5, step: 0.1 }) });
+export var OrientationParams = __assign(__assign(__assign(__assign({}, AxesParams), BoxParams), EllipsoidParams), { visuals: PD.MultiSelect(['box'], PD.objectToOptions(OrientationVisuals)) });
 //
-function orientationLabel(loci) {
-    var label = lociLabel(loci, { countsOnly: true });
-    return "Principal Axes of " + label;
+function getAxesName(locis) {
+    var label = structureElementLociLabelMany(locis, { countsOnly: true });
+    return "Principal Axes of ".concat(label);
 }
-function getOrientationName(data) {
-    return data.locis.length === 1 ? orientationLabel(data.locis[0]) : data.locis.length + " Orientations";
-}
-//
 function buildAxesMesh(data, props, mesh) {
     var state = MeshBuilder.createState(256, 128, mesh);
-    for (var i = 0, il = data.locis.length; i < il; ++i) {
-        var principalAxes = Loci.getPrincipalAxes(data.locis[i]);
-        if (principalAxes) {
-            state.currentGroup = i;
-            addAxes(state, principalAxes.momentsAxes, props.scale, 2, 20);
-        }
-    }
+    var principalAxes = StructureElement.Loci.getPrincipalAxesMany(data.locis);
+    Axes3D.scale(principalAxes.momentsAxes, principalAxes.momentsAxes, props.scaleFactor);
+    state.currentGroup = 0;
+    addAxes(state, principalAxes.momentsAxes, props.radiusScale, 2, 20);
     return MeshBuilder.getMesh(state);
 }
 function getAxesShape(ctx, data, props, shape) {
     var mesh = buildAxesMesh(data, props, shape && shape.geometry);
-    var name = getOrientationName(data);
-    var getLabel = function (groupId) {
-        return orientationLabel(data.locis[groupId]);
-    };
-    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, getLabel);
+    var name = getAxesName(data.locis);
+    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, function () { return name; });
 }
 //
+function getBoxName(locis) {
+    var label = structureElementLociLabelMany(locis, { countsOnly: true });
+    return "Oriented Box of ".concat(label);
+}
 function buildBoxMesh(data, props, mesh) {
     var state = MeshBuilder.createState(256, 128, mesh);
-    for (var i = 0, il = data.locis.length; i < il; ++i) {
-        var principalAxes = Loci.getPrincipalAxes(data.locis[i]);
-        if (principalAxes) {
-            state.currentGroup = i;
-            addOrientedBox(state, principalAxes.boxAxes, props.scale, 2, 20);
-        }
-    }
+    var principalAxes = StructureElement.Loci.getPrincipalAxesMany(data.locis);
+    Axes3D.scale(principalAxes.boxAxes, principalAxes.boxAxes, props.scaleFactor);
+    state.currentGroup = 0;
+    addOrientedBox(state, principalAxes.boxAxes, props.radiusScale, 2, 20);
     return MeshBuilder.getMesh(state);
 }
 function getBoxShape(ctx, data, props, shape) {
     var mesh = buildBoxMesh(data, props, shape && shape.geometry);
-    var name = getOrientationName(data);
-    var getLabel = function (groupId) {
-        return orientationLabel(data.locis[groupId]);
-    };
-    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, getLabel);
+    var name = getBoxName(data.locis);
+    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, function () { return name; });
 }
 //
+function getEllipsoidName(locis) {
+    var label = structureElementLociLabelMany(locis, { countsOnly: true });
+    return "Oriented Ellipsoid of ".concat(label);
+}
 function buildEllipsoidMesh(data, props, mesh) {
     var state = MeshBuilder.createState(256, 128, mesh);
-    for (var i = 0, il = data.locis.length; i < il; ++i) {
-        var principalAxes = Loci.getPrincipalAxes(data.locis[i]);
-        if (principalAxes) {
-            var axes = principalAxes.boxAxes;
-            var origin_1 = axes.origin, dirA = axes.dirA, dirB = axes.dirB;
-            var size = Axes3D.size(Vec3(), axes);
-            Vec3.scale(size, size, 0.5);
-            var radiusScale = Vec3.create(size[2], size[1], size[0]);
-            state.currentGroup = i;
-            addEllipsoid(state, origin_1, dirA, dirB, radiusScale, 2);
-        }
-    }
+    var principalAxes = StructureElement.Loci.getPrincipalAxesMany(data.locis);
+    var axes = principalAxes.boxAxes;
+    var origin = axes.origin, dirA = axes.dirA, dirB = axes.dirB;
+    var size = Axes3D.size(Vec3(), axes);
+    Vec3.scale(size, size, 0.5 * props.scaleFactor);
+    var radiusScale = Vec3.create(size[2], size[1], size[0]);
+    state.currentGroup = 0;
+    addEllipsoid(state, origin, dirA, dirB, radiusScale, 2);
     return MeshBuilder.getMesh(state);
 }
 function getEllipsoidShape(ctx, data, props, shape) {
     var mesh = buildEllipsoidMesh(data, props, shape && shape.geometry);
-    var name = getOrientationName(data);
-    var getLabel = function (groupId) {
-        return orientationLabel(data.locis[groupId]);
-    };
-    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, getLabel);
+    var name = getEllipsoidName(data.locis);
+    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, function () { return name; });
 }
 export function OrientationRepresentation(ctx, getParams) {
     var repr = Representation.createMulti('Orientation', ctx, getParams, Representation.StateBuilder, OrientationVisuals);

package/lib/mol-repr/shape/loci/orientation.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/mol-repr/shape/loci/plane.d.ts ADDED Viewed

@@ -0,0 +1,27 @@
+/**
+ * Copyright (c) 2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ *
+ * @author Alexander Rose <alexander.rose@weirdbyte.de>
+ */
+import { ParamDefinition as PD } from '../../../mol-util/param-definition';
+import { Representation, RepresentationParamsGetter, RepresentationContext } from '../../representation';
+import { StructureElement } from '../../../mol-model/structure';
+export interface PlaneData {
+    locis: StructureElement.Loci[];
+}
+export declare const PlaneParams: {
+    visuals: PD.MultiSelect<"plane">;
+    color: PD.Color;
+    scaleFactor: PD.Numeric;
+    doubleSided: PD.BooleanParam;
+    flipSided: PD.BooleanParam;
+    flatShaded: PD.BooleanParam;
+    ignoreLight: PD.BooleanParam;
+    xrayShaded: PD.BooleanParam;
+    alpha: PD.Numeric;
+    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+};
+export declare type PlaneParams = typeof PlaneParams;
+export declare type PlaneProps = PD.Values<PlaneParams>;
+export declare type PlaneRepresentation = Representation<PlaneData, PlaneParams>;
+export declare function PlaneRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<PlaneData, PlaneParams>): PlaneRepresentation;

package/lib/mol-repr/shape/loci/plane.js ADDED Viewed

@@ -0,0 +1,57 @@
+/**
+ * Copyright (c) 2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ *
+ * @author Alexander Rose <alexander.rose@weirdbyte.de>
+ */
+import { __assign } from "tslib";
+import { ParamDefinition as PD } from '../../../mol-util/param-definition';
+import { ColorNames } from '../../../mol-util/color/names';
+import { ShapeRepresentation } from '../representation';
+import { Representation } from '../../representation';
+import { Shape } from '../../../mol-model/shape';
+import { Mesh } from '../../../mol-geo/geometry/mesh/mesh';
+import { MeshBuilder } from '../../../mol-geo/geometry/mesh/mesh-builder';
+import { structureElementLociLabelMany } from '../../../mol-theme/label';
+import { Mat4, Vec3 } from '../../../mol-math/linear-algebra';
+import { MarkerActions } from '../../../mol-util/marker-action';
+import { Plane } from '../../../mol-geo/primitive/plane';
+import { StructureElement } from '../../../mol-model/structure';
+import { Axes3D } from '../../../mol-math/geometry';
+var _PlaneParams = __assign(__assign({}, Mesh.Params), { color: PD.Color(ColorNames.orange), scaleFactor: PD.Numeric(1, { min: 0.1, max: 10, step: 0.1 }) });
+var PlaneVisuals = {
+    'plane': function (ctx, getParams) { return ShapeRepresentation(getPlaneShape, Mesh.Utils); },
+};
+export var PlaneParams = __assign(__assign({}, _PlaneParams), { visuals: PD.MultiSelect(['plane'], PD.objectToOptions(PlaneVisuals)) });
+//
+function getPlaneName(locis) {
+    var label = structureElementLociLabelMany(locis, { countsOnly: true });
+    return "Best Fit Plane of ".concat(label);
+}
+var tmpMat = Mat4();
+var tmpV = Vec3();
+function buildPlaneMesh(data, props, mesh) {
+    var state = MeshBuilder.createState(256, 128, mesh);
+    var principalAxes = StructureElement.Loci.getPrincipalAxesMany(data.locis);
+    var axes = principalAxes.boxAxes;
+    var plane = Plane();
+    Vec3.add(tmpV, axes.origin, axes.dirC);
+    Mat4.targetTo(tmpMat, tmpV, axes.origin, axes.dirB);
+    Mat4.scale(tmpMat, tmpMat, Axes3D.size(tmpV, axes));
+    Mat4.scaleUniformly(tmpMat, tmpMat, props.scaleFactor);
+    Mat4.setTranslation(tmpMat, axes.origin);
+    state.currentGroup = 0;
+    MeshBuilder.addPrimitive(state, tmpMat, plane);
+    MeshBuilder.addPrimitiveFlipped(state, tmpMat, plane);
+    return MeshBuilder.getMesh(state);
+}
+function getPlaneShape(ctx, data, props, shape) {
+    var mesh = buildPlaneMesh(data, props, shape && shape.geometry);
+    var name = getPlaneName(data.locis);
+    return Shape.create(name, data, mesh, function () { return props.color; }, function () { return 1; }, function () { return name; });
+}
+export function PlaneRepresentation(ctx, getParams) {
+    var repr = Representation.createMulti('Plane', ctx, getParams, Representation.StateBuilder, PlaneVisuals);
+    repr.setState({ markerActions: MarkerActions.Highlighting });
+    return repr;
+}
+//# sourceMappingURL=plane.js.map

package/lib/mol-repr/shape/loci/plane.js.map ADDED Viewed

@@ -0,0 +1 @@

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package/lib/mol-repr/shape/model/unitcell.d.ts CHANGED Viewed

@@ -14,7 +14,7 @@ interface UnitcellData {
 export declare const UnitcellParams: {
     cellColor: PD.Color;
     cellScale: PD.Numeric;
-    ref: PD.Select<"model" | "origin">;
+    ref: PD.Select<"origin" | "model">;
     attachment: PD.Select<"center" | "corner">;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;

package/lib/mol-repr/structure/complex-visual.d.ts CHANGED Viewed

@@ -40,7 +40,7 @@ interface ComplexVisualGeometryBuilder<P extends StructureParams, G extends Geom
 }
 export declare function ComplexVisual<G extends Geometry, P extends StructureParams & Geometry.Params<G>>(builder: ComplexVisualGeometryBuilder<P, G>, materialId: number): ComplexVisual<P>;
 export declare const ComplexMeshParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -55,7 +55,7 @@ export interface ComplexMeshVisualBuilder<P extends ComplexMeshParams> extends C
 }
 export declare function ComplexMeshVisual<P extends ComplexMeshParams>(builder: ComplexMeshVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexCylindersParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
@@ -70,7 +70,7 @@ export interface ComplexCylindersVisualBuilder<P extends ComplexCylindersParams>
 }
 export declare function ComplexCylindersVisual<P extends ComplexCylindersParams>(builder: ComplexCylindersVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexLinesParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     lineSizeAttenuation: PD.BooleanParam;
@@ -82,7 +82,7 @@ export interface ComplexLinesVisualBuilder<P extends ComplexLinesParams> extends
 }
 export declare function ComplexLinesVisual<P extends ComplexLinesParams>(builder: ComplexLinesVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexTextParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     borderWidth: PD.Numeric;
@@ -111,7 +111,7 @@ export interface ComplexTextVisualBuilder<P extends ComplexTextParams> extends C
 }
 export declare function ComplexTextVisual<P extends ComplexTextParams>(builder: ComplexTextVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexDirectVolumeParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -144,7 +144,7 @@ export interface ComplexDirectVolumeVisualBuilder<P extends ComplexDirectVolumeP
 }
 export declare function ComplexDirectVolumeVisual<P extends ComplexDirectVolumeParams>(builder: ComplexDirectVolumeVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexTextureMeshParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;

package/lib/mol-repr/structure/params.d.ts CHANGED Viewed

@@ -6,9 +6,9 @@
  */
 import { ParamDefinition as PD } from '../../mol-util/param-definition';
 import { UnitKind } from './visual/util/common';
-export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
 export declare const StructureParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
 };
 export declare type StructureParams = typeof StructureParams;
@@ -44,7 +44,7 @@ export declare type StructureCylindersParams = typeof StructureCylindersParams;
 export declare const StructurePointsParams: {
     sizeFactor: PD.Numeric;
     pointSizeAttenuation: PD.BooleanParam;
-    pointStyle: PD.Select<"square" | "circle" | "fuzzy">;
+    pointStyle: PD.Select<"fuzzy" | "square" | "circle">;
     alpha: PD.Numeric;
     quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
 };