npm - molstar - Versions diffs - 2.3.5 → 2.3.9 - Mend

molstar 2.3.5 → 2.3.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1658) hide show

package/lib/cli/cifschema/util/cif-dic.js CHANGED Viewed

@@ -86,7 +86,7 @@ export function getFieldType(type, description, values, container) {
         case 'Integer':
             return wrapContainer('int', ',', description, container);
     }
-    console.log("unknown type '" + type + "'");
+    console.log("unknown type '".concat(type, "'"));
     return StrCol(description);
 }
 function ColFromType(type, description) {
@@ -108,17 +108,17 @@ function getImportFrames(d, imports) {
     var _loop_1 = function (g) {
         var file = g.file, save = g.save;
         if (!file || !save) {
-            console.warn("missing 'save' or 'file' for import in '" + d.header + "'");
+            console.warn("missing 'save' or 'file' for import in '".concat(d.header, "'"));
             return "continue";
         }
         var importFrames = imports.get(file);
         if (!importFrames) {
-            console.warn("missing '" + file + "' entry in imports");
+            console.warn("missing '".concat(file, "' entry in imports"));
             return "continue";
         }
         var importSave = importFrames.find(function (id) { return id.header.toLowerCase() === save.toLowerCase(); });
         if (!importSave) {
-            console.warn("missing '" + save + "' save frame in '" + file + "'");
+            console.warn("missing '".concat(save, "' save frame in '").concat(file, "'"));
             return "continue";
         }
         frames.push(importSave);
@@ -177,7 +177,7 @@ function getCode(d, imports, ctx) {
         return [code.str(0), getEnums(d, imports, ctx), getContainer(d, imports, ctx)];
     }
     else {
-        console.log("item_type.code or type.contents not found for '" + d.header + "'");
+        console.log("item_type.code or type.contents not found for '".concat(d.header, "'"));
     }
 }
 function getSubCategory(d, imports, ctx) {
@@ -306,7 +306,7 @@ export function generateSchema(frames, imports) {
             }
             descriptionField = category.getField('description');
             if (categoryKeyNames.size === 0) {
-                console.log("no key given for category '" + categoryName + "'");
+                console.log("no key given for category '".concat(categoryName, "'"));
             }
         }
         if ('description' in d.categories) {
@@ -318,7 +318,7 @@ export function generateSchema(frames, imports) {
                 .replace(/(\r\n|\r|\n)([ \t]+)/g, '\n'); // remove padding after newlines
         }
         else {
-            console.log("no description given for category '" + categoryName + "'");
+            console.log("no description given for category '".concat(categoryName, "'"));
         }
         tables[categoryName] = { description: description, key: categoryKeyNames, columns: {} };
         // console.log('++++++++++++++++++++++++++++++++++++++++++')
@@ -340,7 +340,7 @@ export function generateSchema(frames, imports) {
                     var childName = child_name.str(i);
                     var parentName = parent_name.str(i);
                     if (childName in links && links[childName] !== parentName) {
-                        console.log(childName + " linked to " + links[childName] + ", ignoring link to " + parentName);
+                        console.log("".concat(childName, " linked to ").concat(links[childName], ", ignoring link to ").concat(parentName));
                     }
                     links[childName] = parentName;
                 }
@@ -352,7 +352,7 @@ export function generateSchema(frames, imports) {
         var _a;
         var d = categories[fullName];
         if (!d) {
-            console.log("'" + fullName + "' not found, moving on");
+            console.log("'".concat(fullName, "' not found, moving on"));
             return;
         }
         var categoryName = d.header.substring(d.header[0] === '_' ? 1 : 0, d.header.indexOf('.'));
@@ -368,7 +368,7 @@ export function generateSchema(frames, imports) {
             fields = tables[categoryName].columns;
         }
         else {
-            console.log("category '" + categoryName + "' has no metadata");
+            console.log("category '".concat(categoryName, "' has no metadata"));
             fields = {};
             tables[categoryName] = {
                 description: '',
@@ -378,7 +378,7 @@ export function generateSchema(frames, imports) {
         }
         var itemAliases = getAliases(d, imports, ctx);
         if (itemAliases)
-            aliases[categoryName + "." + itemName] = itemAliases;
+            aliases["".concat(categoryName, ".").concat(itemName)] = itemAliases;
         var description = getDescription(d, imports, ctx) || '';
         // need to use regex to check for matrix or vector items
         // as sub_category assignment is missing for some entries
@@ -388,12 +388,12 @@ export function generateSchema(frames, imports) {
         }
         else if (FORCE_INT_FIELDS.includes(d.header)) {
             fields[itemName] = IntCol(description);
-            console.log("forcing int: " + d.header);
+            console.log("forcing int: ".concat(d.header));
         }
         else if (FORCE_MATRIX_FIELDS.includes(d.header)) {
             fields[itemName] = FloatCol(description);
             fields[FORCE_MATRIX_FIELDS_MAP[d.header]] = MatrixCol(3, 3, description);
-            console.log("forcing matrix: " + d.header);
+            console.log("forcing matrix: ".concat(d.header));
         }
         else if (subCategory === 'matrix') {
             fields[itemName.replace(reMatrixField, '')] = MatrixCol(3, 3, description);
@@ -404,11 +404,11 @@ export function generateSchema(frames, imports) {
         else {
             if (itemName.match(reMatrixField)) {
                 fields[itemName.replace(reMatrixField, '')] = MatrixCol(3, 3, description);
-                console.log(d.header + " should have 'matrix' _item_sub_category.id");
+                console.log("".concat(d.header, " should have 'matrix' _item_sub_category.id"));
             }
             else if (itemName.match(reVectorField)) {
                 fields[itemName.replace(reVectorField, '')] = VectorCol(3, description);
-                console.log(d.header + " should have 'vector' _item_sub_category.id");
+                console.log("".concat(d.header, " should have 'vector' _item_sub_category.id"));
             }
             else {
                 var code = getCode(d, imports, ctx);
@@ -417,15 +417,15 @@ export function generateSchema(frames, imports) {
                     if (fieldType.type === 'str') {
                         if (COMMA_SEPARATED_LIST_FIELDS.includes(d.header)) {
                             fieldType = ListCol('str', ',', description);
-                            console.log("forcing comma separated: " + d.header);
+                            console.log("forcing comma separated: ".concat(d.header));
                         }
                         else if (SPACE_SEPARATED_LIST_FIELDS.includes(d.header)) {
                             fieldType = ListCol('str', ' ', description);
-                            console.log("forcing space separated: " + d.header);
+                            console.log("forcing space separated: ".concat(d.header));
                         }
                         else if (SEMICOLON_SEPARATED_LIST_FIELDS.includes(d.header)) {
                             fieldType = ListCol('str', ';', description);
-                            console.log("forcing space separated: " + d.header);
+                            console.log("forcing space separated: ".concat(d.header));
                         }
                     }
                     if (d.header in EXTRA_ENUM_VALUES) {
@@ -433,7 +433,7 @@ export function generateSchema(frames, imports) {
                             (_a = fieldType.values).push.apply(_a, EXTRA_ENUM_VALUES[d.header]);
                         }
                         else {
-                            console.warn("expected enum: " + d.header);
+                            console.warn("expected enum: ".concat(d.header));
                         }
                     }
                     fields[itemName] = fieldType;

package/lib/cli/cifschema/util/cif-dic.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/cli/cifschema/util/generate.js CHANGED Viewed

@@ -6,10 +6,10 @@
 import { indentString } from '../../../mol-util/string';
 import { FieldPath } from '../../../mol-io/reader/cif/schema';
 function header(name, info, moldataImportPath) {
-    return "/**\n * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated '" + name + "' schema file. " + info + "\n *\n * @author molstar/ciftools package\n */\n\nimport { Database, Column } from '" + moldataImportPath + "/db';\n\nimport Schema = Column.Schema;";
+    return "/**\n * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated '".concat(name, "' schema file. ").concat(info, "\n *\n * @author molstar/ciftools package\n */\n\nimport { Database, Column } from '").concat(moldataImportPath, "/db';\n\nimport Schema = Column.Schema;");
 }
 function footer(name) {
-    return "\nexport type " + name + "_Schema = typeof " + name + "_Schema;\nexport interface " + name + "_Database extends Database<" + name + "_Schema> {};";
+    return "\nexport type ".concat(name, "_Schema = typeof ").concat(name, "_Schema;\nexport interface ").concat(name, "_Database extends Database<").concat(name, "_Schema> {};");
 }
 function getTypeShorthands(schema, fields) {
     var types = new Set();
@@ -61,31 +61,31 @@ function getTypeDef(c) {
         case 'float': return 'float';
         case 'coord': return 'coord';
         case 'enum':
-            return "Aliased<'" + c.values.map(function (v) { return v.replace(/'/g, '\\\''); }).join("' | '") + "'>(" + c.subType + ")";
+            return "Aliased<'".concat(c.values.map(function (v) { return v.replace(/'/g, '\\\''); }).join("' | '"), "'>(").concat(c.subType, ")");
         case 'matrix':
-            return "Matrix(" + c.rows + ", " + c.columns + ")";
+            return "Matrix(".concat(c.rows, ", ").concat(c.columns, ")");
         case 'vector':
-            return "Vector(" + c.length + ")";
+            return "Vector(".concat(c.length, ")");
         case 'list':
             if (c.subType === 'int') {
-                return "List('" + c.separator + "', x => parseInt(x, 10))";
+                return "List('".concat(c.separator, "', x => parseInt(x, 10))");
             }
             else if (c.subType === 'float' || c.subType === 'coord') {
-                return "List('" + c.separator + "', x => parseFloat(x))";
+                return "List('".concat(c.separator, "', x => parseFloat(x))");
             }
             else {
-                return "List('" + c.separator + "', x => x)";
+                return "List('".concat(c.separator, "', x => x)");
             }
     }
 }
 var reSafePropertyName = /^[a-zA-Z_$][0-9a-zA-Z_$]*$/;
-function safePropertyString(name) { return name.match(reSafePropertyName) ? name : "'" + name + "'"; }
+function safePropertyString(name) { return name.match(reSafePropertyName) ? name : "'".concat(name, "'"); }
 function doc(description, spacesCount) {
     var spaces = ' '.repeat(spacesCount);
     return [
-        spaces + "/**",
-        ("" + indentString(description, 1, spaces + " * ")).replace(/ +\n/g, '\n'),
-        spaces + " */"
+        "".concat(spaces, "/**"),
+        "".concat(indentString(description, 1, "".concat(spaces, " * "))).replace(/ +\n/g, '\n'),
+        "".concat(spaces, " */")
     ].join('\n');
 }
 export function generate(name, info, schema, fields, moldataImportPath, addAliases) {
@@ -96,23 +96,23 @@ export function generate(name, info, schema, fields, moldataImportPath, addAlias
                 var schemaTable_1 = schema.tables[table];
                 Object.keys(fields[table]).forEach(function (column) {
                     if (!(column in schemaTable_1.columns)) {
-                        console.log("filter field '" + table + "." + column + "' not found in schema");
+                        console.log("filter field '".concat(table, ".").concat(column, "' not found in schema"));
                     }
                 });
             }
             else {
-                console.log("filter category '" + table + "' not found in schema");
+                console.log("filter category '".concat(table, "' not found in schema"));
             }
         });
     }
-    codeLines.push("export const " + name + "_Schema = {");
+    codeLines.push("export const ".concat(name, "_Schema = {"));
     Object.keys(schema.tables).forEach(function (table) {
         if (fields && !fields[table])
             return;
         var _a = schema.tables[table], description = _a.description, columns = _a.columns;
         if (description)
             codeLines.push(doc(description, 4));
-        codeLines.push("    " + safePropertyString(table) + ": {");
+        codeLines.push("    ".concat(safePropertyString(table), ": {"));
         Object.keys(columns).forEach(function (columnName) {
             if (fields && !fields[table][columnName])
                 return;
@@ -120,14 +120,14 @@ export function generate(name, info, schema, fields, moldataImportPath, addAlias
             var typeDef = getTypeDef(c);
             if (c.description)
                 codeLines.push(doc(c.description, 8));
-            codeLines.push("        " + safePropertyString(columnName) + ": " + typeDef + ",");
+            codeLines.push("        ".concat(safePropertyString(columnName), ": ").concat(typeDef, ","));
         });
         codeLines.push('    },');
     });
     codeLines.push('};');
     if (addAliases) {
         codeLines.push('');
-        codeLines.push("export const " + name + "_Aliases = {");
+        codeLines.push("export const ".concat(name, "_Aliases = {"));
         Object.keys(schema.aliases).forEach(function (path) {
             var _a = path.split('.'), table = _a[0], columnName = _a[1];
             if (fields && !fields[table])
@@ -141,14 +141,14 @@ export function generate(name, info, schema, fields, moldataImportPath, addAlias
             });
             if (filteredAliases.size === 0)
                 return;
-            codeLines.push("    " + safePropertyString(path) + ": [");
+            codeLines.push("    ".concat(safePropertyString(path), ": ["));
             filteredAliases.forEach(function (alias) {
-                codeLines.push("        '" + alias + "',");
+                codeLines.push("        '".concat(alias, "',"));
             });
             codeLines.push('    ],');
         });
         codeLines.push('};');
     }
-    return header(name, info, moldataImportPath) + "\n\n" + getTypeShorthands(schema, fields) + "\n\n" + codeLines.join('\n') + "\n" + footer(name);
+    return "".concat(header(name, info, moldataImportPath), "\n\n").concat(getTypeShorthands(schema, fields), "\n\n").concat(codeLines.join('\n'), "\n").concat(footer(name));
 }
 //# sourceMappingURL=generate.js.map

package/lib/cli/cifschema/util/generate.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"generate.js","sourceRoot":"","sources":["../../../../src/cli/cifschema/util/generate.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAGH,OAAO,EAAE,YAAY,EAAE,MAAM,0BAA0B,CAAC;AACxD,OAAO,EAAE,SAAS,EAAE,MAAM,mCAAmC,CAAC;AAE9D,SAAS,MAAM,CAAC,IAAY,EAAE,IAAY,EAAE,iBAAyB;IACjE,OAAO,yIAGU,IAAI,4BAAkB,IAAI,iGAKX,iBAAiB,4CAEtB,CAAC;AAChC,CAAC;AAED,SAAS,MAAM,CAAC,IAAY;IACxB,OAAO,wBACG,IAAI,8BAAoB,IAAI,wCACvB,IAAI,wCAA8B,IAAI,iBAAc,CAAC;AACxE,CAAC;AAED,SAAS,iBAAiB,CAAC,MAAgB,EAAE,MAAe;IACxD,IAAM,KAAK,GAAG,IAAI,GAAG,EAAU,CAAC;IAChC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;QACpC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC;YAAE,OAAO;QAC7B,IAAA,OAAO,GAAK,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,QAAzB,CAA0B;QACzC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,UAAA,UAAU;YACnC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,UAAU,CAAC;gBAAE,OAAO;YACjD,KAAK,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,CAAC;QAC7D,CAAC,CAAC,CAAC;IACP,CAAC,CAAC,CAAC;IACH,IAAM,UAAU,GAAa,EAAE,CAAC;IAChC,KAAK,CAAC,OAAO,CAAC,UAAA,IAAI;QACd,QAAQ,IAAI,EAAE;YACV,KAAK,KAAK;gBAAE,UAAU,CAAC,IAAI,CAAC,yBAAyB,CAAC,CAAC;gBAAC,MAAM;YAC9D,KAAK,KAAK;gBAAE,UAAU,CAAC,IAAI,CAAC,yBAAyB,CAAC,CAAC;gBAAC,MAAM;YAC9D,KAAK,OAAO;gBAAE,UAAU,CAAC,IAAI,CAAC,6BAA6B,CAAC,CAAC;gBAAC,MAAM;YACpE,KAAK,OAAO;gBAAE,UAAU,CAAC,IAAI,CAAC,6BAA6B,CAAC,CAAC;gBAAC,MAAM;YACpE,KAAK,MAAM;gBAAE,UAAU,CAAC,IAAI,CAAC,iCAAiC,CAAC,CAAC;gBAAC,MAAM;YACvE,KAAK,QAAQ;gBAAE,UAAU,CAAC,IAAI,CAAC,+BAA+B,CAAC,CAAC;gBAAC,MAAM;YACvE,KAAK,QAAQ;gBAAE,UAAU,CAAC,IAAI,CAAC,+BAA+B,CAAC,CAAC;gBAAC,MAAM;YACvE,KAAK,MAAM;gBAAE,UAAU,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;gBAAC,MAAM;SACpE;IACL,CAAC,CAAC,CAAC;IACH,OAAO,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AACjC,CAAC;AAED,SAAS,UAAU,CAAC,CAAS;IACzB,QAAQ,CAAC,CAAC,IAAI,EAAE;QACZ,KAAK,KAAK,CAAC,CAAC,OAAO,KAAK,CAAC;QACzB,KAAK,KAAK,CAAC,CAAC,OAAO,KAAK,CAAC;QACzB,KAAK,OAAO,CAAC,CAAC,OAAO,OAAO,CAAC;QAC7B,KAAK,OAAO,CAAC,CAAC,OAAO,OAAO,CAAC;QAC7B,KAAK,MAAM;YACP,OAAO,mBAAY,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,OAAO,CAAC,IAAI,EAAE,MAAM,CAAC,EAAvB,CAAuB,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,gBAAM,CAAC,CAAC,OAAO,MAAG,CAAC;QAClG,KAAK,QAAQ;YACT,OAAO,iBAAU,CAAC,CAAC,IAAI,eAAK,CAAC,CAAC,OAAO,MAAG,CAAC;QAC7C,KAAK,QAAQ;YACT,OAAO,iBAAU,CAAC,CAAC,MAAM,MAAG,CAAC;QACjC,KAAK,MAAM;YACP,IAAI,CAAC,CAAC,OAAO,KAAK,KAAK,EAAE;gBACrB,OAAO,gBAAS,CAAC,CAAC,SAAS,6BAA0B,CAAC;aACzD;iBAAM,IAAI,CAAC,CAAC,OAAO,KAAK,OAAO,IAAI,CAAC,CAAC,OAAO,KAAK,OAAO,EAAE;gBACvD,OAAO,gBAAS,CAAC,CAAC,SAAS,2BAAwB,CAAC;aACvD;iBAAM;gBACH,OAAO,gBAAS,CAAC,CAAC,SAAS,eAAY,CAAC;aAC3C;KACR;AACL,CAAC;AAED,IAAM,kBAAkB,GAAG,4BAA4B,CAAC;AACxD,SAAS,kBAAkB,CAAC,IAAY,IAAI,OAAO,IAAI,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,WAAI,IAAI,MAAG,CAAC,CAAC,CAAC;AAEzG,SAAS,GAAG,CAAC,WAAmB,EAAE,WAAmB;IACjD,IAAM,MAAM,GAAG,GAAG,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;IACvC,OAAO;QACH,UAAG,MAAM,QAAK;QACd,UAAG,YAAY,CAAC,WAAW,EAAE,CAAC,EAAE,UAAG,MAAM,QAAK,CAAC,CAAE,CAAC,OAAO,CAAC,OAAO,EAAE,IAAI,CAAC;QACxE,UAAG,MAAM,QAAK;KACjB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AACjB,CAAC;AAED,MAAM,UAAU,QAAQ,CAAC,IAAY,EAAE,IAAY,EAAE,MAAgB,EAAE,MAA0B,EAAE,iBAAyB,EAAE,UAAmB;IAC7I,IAAM,SAAS,GAAa,EAAE,CAAC;IAE/B,IAAI,MAAM,EAAE;QACR,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;YAC7B,IAAI,KAAK,IAAI,MAAM,CAAC,MAAM,EAAE;gBACxB,IAAM,aAAW,GAAG,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;gBACzC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,MAAM;oBACrC,IAAI,CAAC,CAAC,MAAM,IAAI,aAAW,CAAC,OAAO,CAAC,EAAE;wBAClC,OAAO,CAAC,GAAG,CAAC,wBAAiB,KAAK,cAAI,MAAM,0BAAuB,CAAC,CAAC;qBACxE;gBACL,CAAC,CAAC,CAAC;aACN;iBAAM;gBACH,OAAO,CAAC,GAAG,CAAC,2BAAoB,KAAK,0BAAuB,CAAC,CAAC;aACjE;QACL,CAAC,CAAC,CAAC;KACN;IAED,SAAS,CAAC,IAAI,CAAC,uBAAgB,IAAI,gBAAa,CAAC,CAAC;IAClD,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;QACpC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC;YAAE,OAAO;QAC/B,IAAA,KAA2B,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,EAA7C,WAAW,iBAAA,EAAE,OAAO,aAAyB,CAAC;QACtD,IAAI,WAAW;YAAE,SAAS,CAAC,IAAI,CAAC,GAAG,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,CAAC;QACrD,SAAS,CAAC,IAAI,CAAC,cAAO,kBAAkB,CAAC,KAAK,CAAC,QAAK,CAAC,CAAC;QACtD,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,UAAA,UAAU;YACnC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,UAAU,CAAC;gBAAE,OAAO;YACjD,IAAM,CAAC,GAAG,OAAO,CAAC,UAAU,CAAC,CAAC;YAC9B,IAAM,OAAO,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;YAC9B,IAAI,CAAC,CAAC,WAAW;gBAAE,SAAS,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,CAAC;YACzD,SAAS,CAAC,IAAI,CAAC,kBAAW,kBAAkB,CAAC,UAAU,CAAC,eAAK,OAAO,MAAG,CAAC,CAAC;QAC7E,CAAC,CAAC,CAAC;QACH,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;IAC7B,CAAC,CAAC,CAAC;IACH,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAErB,IAAI,UAAU,EAAE;QACZ,SAAS,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACnB,SAAS,CAAC,IAAI,CAAC,uBAAgB,IAAI,iBAAc,CAAC,CAAC;QACnD,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,UAAA,IAAI;YAC9B,IAAA,KAAsB,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAApC,KAAK,QAAA,EAAE,UAAU,QAAmB,CAAC;YAC5C,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC;gBAAE,OAAO;YACrC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,UAAU,CAAC;gBAAE,OAAO;YAEjD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package/lib/cli/cifschema/util/schema.js CHANGED Viewed

@@ -30,7 +30,7 @@ export function mergeFilters() {
     filters.forEach(function (filter) {
         Object.keys(filter).forEach(function (category) {
             Object.keys(filter[category]).forEach(function (field) {
-                var key = category + "." + field;
+                var key = "".concat(category, ".").concat(field);
                 var value = fields.get(key) || 0;
                 fields.set(key, value + 1);
             });

package/lib/cli/cifschema/util/schema.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"schema.js","sourceRoot":"","sources":["../../../../src/cli/cifschema/util/schema.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAgBH,MAAM,UAAU,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAG5F,MAAM,UAAU,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAG5F,MAAM,UAAU,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAGlG,MAAM,UAAU,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAGlG,MAAM,UAAU,OAAO,CAAC,MAAgB,EAAE,OAAsB,EAAE,WAAmB;IACjF,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC1D,CAAC;AAGD,MAAM,UAAU,SAAS,CAAC,MAAc,EAAE,WAAmB;IACzD,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,CAAC;AACnD,CAAC;AAGD,MAAM,UAAU,SAAS,CAAC,OAAe,EAAE,IAAY,EAAE,WAAmB;IACxE,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,OAAO,SAAA,EAAE,IAAI,MAAA,EAAE,CAAC;AAC1D,CAAC;AAGD,MAAM,UAAU,OAAO,CAAC,OAA0C,EAAE,SAAiB,EAAE,WAAmB;IACtG,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,SAAS,WAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC7D,CAAC;AAID,MAAM,UAAU,YAAY;IAAC,iBAAoB;SAApB,UAAoB,EAApB,qBAAoB,EAApB,IAAoB;QAApB,4BAAoB;;IAC7C,IAAM,CAAC,GAAG,OAAO,CAAC,MAAM,CAAC;IACzB,IAAM,YAAY,GAAW,EAAE,CAAC;IAChC,IAAM,MAAM,GAAwB,IAAI,GAAG,EAAE,CAAC;IAC9C,OAAO,CAAC,OAAO,CAAC,UAAA,MAAM;QAClB,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,QAAQ;YAChC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;gBACvC,IAAM,GAAG,~~GAAM~~,QAAQ,~~SAAI~~,~~KAAO~~,CAAC;gBACnC,IAAM,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;gBACnC,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,GAAG,CAAC,CAAC,CAAC;YAC/B,CAAC,CAAC,CAAC;QACP,CAAC,CAAC,CAAC;IACP,CAAC,CAAC,CAAC;IACH,MAAM,CAAC,OAAO,CAAC,UAAC,CAAC,EAAE,CAAC;QAChB,IAAI,CAAC,KAAK,CAAC;YAAE,OAAO;QACd,IAAA,KAA4B,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,EAAvC,YAAY,QAAA,EAAE,SAAS,QAAgB,CAAC;QAC/C,IAAI,YAAY,IAAI,YAAY,EAAE;YAC9B,YAAY,CAAC,YAAY,CAAC,CAAC,SAAS,CAAC,GAAG,IAAI,CAAC;SAChD;aAAM;YACH,YAAY,CAAC,YAAY,CAAC,GAAG,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;SACpD;IACL,CAAC,CAAC,CAAC;IACH,OAAO,YAAY,CAAC;AACxB,CAAC"}
1	+ {"version":3,"file":"schema.js","sourceRoot":"","sources":["../../../../src/cli/cifschema/util/schema.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAgBH,MAAM,UAAU,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAG5F,MAAM,UAAU,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAG5F,MAAM,UAAU,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAGlG,MAAM,UAAU,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAGlG,MAAM,UAAU,OAAO,CAAC,MAAgB,EAAE,OAAsB,EAAE,WAAmB;IACjF,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC1D,CAAC;AAGD,MAAM,UAAU,SAAS,CAAC,MAAc,EAAE,WAAmB;IACzD,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,CAAC;AACnD,CAAC;AAGD,MAAM,UAAU,SAAS,CAAC,OAAe,EAAE,IAAY,EAAE,WAAmB;IACxE,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,OAAO,SAAA,EAAE,IAAI,MAAA,EAAE,CAAC;AAC1D,CAAC;AAGD,MAAM,UAAU,OAAO,CAAC,OAA0C,EAAE,SAAiB,EAAE,WAAmB;IACtG,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,SAAS,WAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC7D,CAAC;AAID,MAAM,UAAU,YAAY;IAAC,iBAAoB;SAApB,UAAoB,EAApB,qBAAoB,EAApB,IAAoB;QAApB,4BAAoB;;IAC7C,IAAM,CAAC,GAAG,OAAO,CAAC,MAAM,CAAC;IACzB,IAAM,YAAY,GAAW,EAAE,CAAC;IAChC,IAAM,MAAM,GAAwB,IAAI,GAAG,EAAE,CAAC;IAC9C,OAAO,CAAC,OAAO,CAAC,UAAA,MAAM;QAClB,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,QAAQ;YAChC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;gBACvC,IAAM,GAAG,GAAG,UAAG,QAAQ,cAAI,KAAK,CAAE,CAAC;gBACnC,IAAM,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;gBACnC,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,GAAG,CAAC,CAAC,CAAC;YAC/B,CAAC,CAAC,CAAC;QACP,CAAC,CAAC,CAAC;IACP,CAAC,CAAC,CAAC;IACH,MAAM,CAAC,OAAO,CAAC,UAAC,CAAC,EAAE,CAAC;QAChB,IAAI,CAAC,KAAK,CAAC;YAAE,OAAO;QACd,IAAA,KAA4B,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,EAAvC,YAAY,QAAA,EAAE,SAAS,QAAgB,CAAC;QAC/C,IAAI,YAAY,IAAI,YAAY,EAAE;YAC9B,YAAY,CAAC,YAAY,CAAC,CAAC,SAAS,CAAC,GAAG,IAAI,CAAC;SAChD;aAAM;YACH,YAAY,CAAC,YAAY,CAAC,GAAG,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;SACpD;IACL,CAAC,CAAC,CAAC;IACH,OAAO,YAAY,CAAC;AACxB,CAAC"}

package/lib/cli/lipid-params/index.js CHANGED Viewed

@@ -21,7 +21,7 @@ function ensureAvailable(path, url) {
                 case 0:
                     if (!(FORCE_DOWNLOAD || !fs.existsSync(path))) return [3 /*break*/, 3];
                     name_1 = url.substr(url.lastIndexOf('/') + 1);
-                    console.log("downloading " + name_1 + "...");
+                    console.log("downloading ".concat(name_1, "..."));
                     return [4 /*yield*/, fetch(url)];
                 case 1:
                     data = _d.sent();
@@ -33,7 +33,7 @@ function ensureAvailable(path, url) {
                     return [4 /*yield*/, data.text()];
                 case 2:
                     _b.apply(_a, _c.concat([_d.sent()]));
-                    console.log("done downloading " + name_1);
+                    console.log("done downloading ".concat(name_1));
                     _d.label = 3;
                 case 3: return [2 /*return*/];
             }
@@ -72,7 +72,7 @@ function run(out) {
                     }
                     lipidNames = JSON.stringify(lipids.array);
                     if (out) {
-                        output = "/**\n * Copyright (c) 2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated lipid params file. Names extracted from Martini FF lipids itp.\n *\n * @author molstar/lipid-params cli\n */\n\nexport const LipidNames = new Set(" + lipidNames.replace(/"/g, "'").replace(/,/g, ', ') + ");\n";
+                        output = "/**\n * Copyright (c) 2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated lipid params file. Names extracted from Martini FF lipids itp.\n *\n * @author molstar/lipid-params cli\n */\n\nexport const LipidNames = new Set(".concat(lipidNames.replace(/"/g, "'").replace(/,/g, ', '), ");\n");
                         fs.writeFileSync(out, output);
                     }
                     else {

package/lib/cli/lipid-params/index.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/cli/state-docs/index.js CHANGED Viewed

@@ -24,10 +24,10 @@ function typeToString(o) {
     return o.map(function (o) { return o.name; }).join(' | ');
 }
 function writeTransformer(t) {
-    StringBuilder.write(builder, "## <a name=\"" + t.id.replace('.', '-') + "\"></a>" + t.id + " :: " + typeToString(t.definition.from) + " -> " + typeToString(t.definition.to));
+    StringBuilder.write(builder, "## <a name=\"".concat(t.id.replace('.', '-'), "\"></a>").concat(t.id, " :: ").concat(typeToString(t.definition.from), " -> ").concat(typeToString(t.definition.to)));
     StringBuilder.newline(builder);
     if (t.definition.display.description) {
-        StringBuilder.write(builder, "*" + t.definition.display.description + "*");
+        StringBuilder.write(builder, "*".concat(t.definition.display.description, "*"));
         StringBuilder.newline(builder);
     }
     StringBuilder.newline(builder);
@@ -39,7 +39,7 @@ function writeTransformer(t) {
         StringBuilder.newline(builder);
         StringBuilder.write(builder, "### Default Parameters");
         StringBuilder.newline(builder);
-        StringBuilder.write(builder, "```js\n" + JSON.stringify(ParamDefinition.getDefaultValues(params), null, 2) + "\n```");
+        StringBuilder.write(builder, "```js\n".concat(JSON.stringify(ParamDefinition.getDefaultValues(params), null, 2), "\n```"));
         StringBuilder.newline(builder);
     }
     StringBuilder.write(builder, '----------------------------');
@@ -50,7 +50,7 @@ StringBuilder.write(builder, '# Mol* Plugin State Transformer Reference');
 StringBuilder.newline(builder);
 StringBuilder.newline(builder);
 transformers.forEach(function (t) {
-    StringBuilder.write(builder, "* [" + t.id + "](#" + t.id.replace('.', '-') + ")");
+    StringBuilder.write(builder, "* [".concat(t.id, "](#").concat(t.id.replace('.', '-'), ")"));
     StringBuilder.newline(builder);
 });
 StringBuilder.newline(builder);

package/lib/cli/state-docs/index.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/cli/state-docs/pd-to-md.js CHANGED Viewed

@@ -14,7 +14,7 @@ function paramInfo(param, offset) {
         case 'number': return 'Numeric value';
         case 'converted': return paramInfo(param.converted, offset);
         case 'conditioned': return getParams(param.conditionParams, offset);
-        case 'multi-select': return "Array of " + oToS(param.options);
+        case 'multi-select': return "Array of ".concat(oToS(param.options));
         case 'color': return 'Color as 0xrrggbb';
         case 'color-list': return "A list of colors as 0xrrggbb";
         case 'vec3': return "3D vector [x, y, z]";
@@ -22,25 +22,25 @@ function paramInfo(param, offset) {
         case 'url': return "URL couple with unique identifier";
         case 'file': return "JavaScript File Handle";
         case 'file-list': return "JavaScript FileList Handle";
-        case 'select': return "One of " + oToS(param.options);
+        case 'select': return "One of ".concat(oToS(param.options));
         case 'value-ref': return "Reference to a runtime defined value.";
         case 'data-ref': return "Reference to a computed data value.";
         case 'text': return 'String';
         case 'interval': return "Interval [min, max]";
-        case 'group': return "Object with:\n" + getParams(param.params, offset + 2);
-        case 'mapped': return "Object { name: string, params: object } where name+params are:\n" + getMapped(param, offset + 2);
+        case 'group': return "Object with:\n".concat(getParams(param.params, offset + 2));
+        case 'mapped': return "Object { name: string, params: object } where name+params are:\n".concat(getMapped(param, offset + 2));
         case 'line-graph': return "A list of 2d vectors [xi, yi][]";
-        case 'object-list': return "Array of\n" + paramInfo(PD.Group(param.element), offset + 2);
+        case 'object-list': return "Array of\n".concat(paramInfo(PD.Group(param.element), offset + 2));
         // TODO: support more languages
         case 'script': return "An expression in the specified language { language: 'mol-script', expressiong: string }";
         default:
             var _ = param;
-            console.warn(_ + " has no associated UI component");
+            console.warn("".concat(_, " has no associated UI component"));
             return '';
     }
 }
 function oToS(options) {
-    return options.map(function (o) { return "'" + o[0] + "'"; }).join(', ');
+    return options.map(function (o) { return "'".concat(o[0], "'"); }).join(', ');
 }
 function offsetS(n) {
     return new Array(n + 1).join(' ') + '- ';
@@ -50,7 +50,7 @@ function getMapped(param, offset) {
     for (var _i = 0, _a = param.select.options; _i < _a.length; _i++) {
         var n = _a[_i][0];
         ret += offsetS(offset);
-        ret += "**" + n + "**:\n";
+        ret += "**".concat(n, "**:\n");
         ret += paramInfo(param.map(n), offset + 2);
         ret += '\n';
     }
@@ -62,12 +62,12 @@ function getParams(params, offset) {
         var k = _a[_i];
         var param = params[k];
         ret += offsetS(offset);
-        ret += "**" + k + "**" + (param.isOptional ? '?:' : ':') + " " + paramInfo(param, offset);
+        ret += "**".concat(k, "**").concat(param.isOptional ? '?:' : ':', " ").concat(paramInfo(param, offset));
         // if (param.defaultValue) {
         //     ret += ` = ${JSON.stringify(param.defaultValue)}`;
         // }
         if (param.description) {
-            ret += " *(" + param.description + ")*";
+            ret += " *(".concat(param.description, ")*");
         }
         ret += '\n';
     }

package/lib/cli/state-docs/pd-to-md.js.map CHANGED Viewed

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