molstar 4.0.1 → 4.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +197 -197
- package/build/viewer/embedded.html +52 -52
- package/build/viewer/index.html +129 -129
- package/build/viewer/molstar.js +1 -1
- package/build/viewer/molstar.js.LICENSE.txt +0 -9
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/viewport.d.ts +8 -8
- package/lib/apps/mesoscale-explorer/behavior/camera.d.ts +1 -1
- package/lib/apps/mesoscale-explorer/behavior/select.d.ts +1 -1
- package/lib/apps/mesoscale-explorer/data/cellpack/model.d.ts +2 -2
- package/lib/apps/mesoscale-explorer/data/cellpack/preset.d.ts +1 -1
- package/lib/apps/mesoscale-explorer/data/cellpack/preset.js +5 -5
- package/lib/apps/mesoscale-explorer/data/generic/preset.d.ts +1 -1
- package/lib/apps/mesoscale-explorer/data/generic/preset.js +3 -3
- package/lib/apps/mesoscale-explorer/data/mmcif/preset.d.ts +1 -1
- package/lib/apps/mesoscale-explorer/data/mmcif/preset.js +3 -3
- package/lib/apps/mesoscale-explorer/data/petworld/preset.d.ts +1 -1
- package/lib/apps/mesoscale-explorer/data/petworld/preset.js +3 -3
- package/lib/apps/mesoscale-explorer/data/state.d.ts +19 -10
- package/lib/apps/mesoscale-explorer/data/state.js +14 -2
- package/lib/apps/mesoscale-explorer/index.html +100 -100
- package/lib/apps/mesoscale-explorer/style.scss +33 -33
- package/lib/apps/mesoscale-explorer/ui/entities.d.ts +19 -13
- package/lib/apps/mesoscale-explorer/ui/entities.js +23 -4
- package/lib/apps/viewer/app.d.ts +30 -24
- package/lib/apps/viewer/app.js +6 -6
- package/lib/apps/viewer/embedded.html +52 -52
- package/lib/apps/viewer/index.html +129 -129
- package/lib/cli/chem-comp-dict/create-ions.js +9 -9
- package/lib/cli/chem-comp-dict/create-saccharides.js +9 -9
- package/lib/cli/chem-comp-dict/util.d.ts +112 -112
- package/lib/cli/cifschema/util/cif-dic.js +1 -0
- package/lib/cli/cifschema/util/generate.js +12 -12
- package/lib/cli/lipid-params/index.js +9 -9
- package/lib/cli/mvs/mvs-print-schema.d.ts +1 -0
- package/lib/cli/mvs/mvs-print-schema.js +1 -0
- package/lib/cli/mvs/mvs-render.d.ts +1 -0
- package/lib/cli/mvs/mvs-render.js +1 -0
- package/lib/cli/mvs/mvs-validate.d.ts +1 -0
- package/lib/cli/mvs/mvs-validate.js +1 -0
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +8 -8
- package/lib/commonjs/apps/mesoscale-explorer/behavior/camera.d.ts +1 -1
- package/lib/commonjs/apps/mesoscale-explorer/behavior/select.d.ts +1 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/model.d.ts +2 -2
- package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/preset.d.ts +1 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/preset.js +5 -5
- package/lib/commonjs/apps/mesoscale-explorer/data/generic/preset.d.ts +1 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/generic/preset.js +3 -3
- package/lib/commonjs/apps/mesoscale-explorer/data/mmcif/preset.d.ts +1 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/mmcif/preset.js +3 -3
- package/lib/commonjs/apps/mesoscale-explorer/data/petworld/preset.d.ts +1 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/petworld/preset.js +3 -3
- package/lib/commonjs/apps/mesoscale-explorer/data/state.d.ts +19 -10
- package/lib/commonjs/apps/mesoscale-explorer/data/state.js +15 -3
- package/lib/commonjs/apps/mesoscale-explorer/ui/entities.d.ts +19 -13
- package/lib/commonjs/apps/mesoscale-explorer/ui/entities.js +22 -3
- package/lib/commonjs/apps/viewer/app.d.ts +30 -24
- package/lib/commonjs/apps/viewer/app.js +6 -6
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +9 -9
- package/lib/commonjs/cli/chem-comp-dict/create-saccharides.js +9 -9
- package/lib/commonjs/cli/chem-comp-dict/util.d.ts +112 -112
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +1 -0
- package/lib/commonjs/cli/cifschema/util/generate.js +12 -12
- package/lib/commonjs/cli/lipid-params/index.js +9 -9
- package/lib/commonjs/cli/mvs/mvs-print-schema.d.ts +1 -0
- package/lib/commonjs/cli/mvs/mvs-print-schema.js +1 -0
- package/lib/commonjs/cli/mvs/mvs-render.d.ts +1 -0
- package/lib/commonjs/cli/mvs/mvs-render.js +1 -0
- package/lib/commonjs/cli/mvs/mvs-validate.d.ts +1 -0
- package/lib/commonjs/cli/mvs/mvs-validate.js +1 -0
- package/lib/commonjs/examples/alpha-orbitals/example-data.js +160 -160
- package/lib/commonjs/extensions/alpha-orbitals/gpu/shader.frag.js +136 -136
- package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +2 -2
- package/lib/commonjs/extensions/anvil/behavior.d.ts +10 -9
- package/lib/commonjs/extensions/anvil/representation.d.ts +5 -0
- package/lib/commonjs/extensions/assembly-symmetry/behavior.d.ts +2 -1
- package/lib/commonjs/extensions/assembly-symmetry/prop.js +24 -24
- package/lib/commonjs/extensions/assembly-symmetry/representation.d.ts +1 -0
- package/lib/commonjs/extensions/backgrounds/index.d.ts +2 -2
- package/lib/commonjs/extensions/backgrounds/index.js +2 -1
- package/lib/commonjs/extensions/dnatco/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +10 -10
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.js +5 -5
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
- package/lib/commonjs/extensions/dnatco/ntc-tube/behavior.d.ts +10 -10
- package/lib/commonjs/extensions/dnatco/ntc-tube/behavior.js +5 -5
- package/lib/commonjs/extensions/dnatco/ntc-tube/representation.d.ts +3 -0
- package/lib/commonjs/extensions/g3d/format.d.ts +6 -6
- package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +6 -4
- package/lib/commonjs/extensions/geo-export/index.d.ts +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +41 -41
- package/lib/commonjs/extensions/meshes/mesh-extension.d.ts +2 -3
- package/lib/commonjs/extensions/meshes/mesh-streaming/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/meshes/mesh-streaming/server-info.d.ts +2 -2
- package/lib/commonjs/extensions/model-archive/quality-assessment/behavior.d.ts +9 -9
- package/lib/commonjs/extensions/model-export/index.d.ts +1 -1
- package/lib/commonjs/extensions/mp4-export/index.d.ts +1 -1
- package/lib/commonjs/extensions/mvs/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/mvs/camera.d.ts +2 -0
- package/lib/commonjs/extensions/mvs/camera.js +29 -2
- package/lib/commonjs/extensions/mvs/components/annotation-label/representation.d.ts +4 -0
- package/lib/commonjs/extensions/mvs/components/annotation-label/visual.d.ts +1 -0
- package/lib/commonjs/extensions/mvs/components/custom-label/representation.d.ts +4 -2
- package/lib/commonjs/extensions/mvs/components/custom-label/visual.d.ts +1 -0
- package/lib/commonjs/extensions/mvs/components/formats.d.ts +6 -4
- package/lib/commonjs/extensions/mvs/components/formats.js +2 -1
- package/lib/commonjs/extensions/mvs/load-helpers.d.ts +1 -1
- package/lib/commonjs/extensions/mvs/load.d.ts +2 -0
- package/lib/commonjs/extensions/mvs/load.js +12 -6
- package/lib/commonjs/extensions/mvs/tree/mvs/mvs-builder.d.ts +2 -8
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +22 -22
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -0
- package/lib/commonjs/extensions/sb-ncbr/partial-charges/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/sb-ncbr/partial-charges/preset.d.ts +4 -4
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-meshes.d.ts +1 -1
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-root.d.ts +5 -5
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-segmentation.d.ts +1 -1
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-state.d.ts +2 -2
- package/lib/commonjs/extensions/volumes-and-segmentations/global-state.d.ts +2 -2
- package/lib/commonjs/extensions/volumes-and-segmentations/helpers.d.ts +1 -1
- package/lib/commonjs/extensions/volumes-and-segmentations/index.d.ts +1 -1
- package/lib/commonjs/extensions/wwpdb/ccd/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/wwpdb/ccd/representation.d.ts +4 -4
- package/lib/commonjs/extensions/zenodo/index.d.ts +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +14 -2
- package/lib/commonjs/mol-canvas3d/canvas3d.js +2 -2
- package/lib/commonjs/mol-canvas3d/controls/trackball.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
- package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
- package/lib/commonjs/mol-canvas3d/passes/background.d.ts +6 -1
- package/lib/commonjs/mol-canvas3d/passes/background.js +13 -1
- package/lib/commonjs/mol-canvas3d/passes/bloom.d.ts +37 -0
- package/lib/commonjs/mol-canvas3d/passes/bloom.js +272 -0
- package/lib/commonjs/mol-canvas3d/passes/dpoit.js +4 -2
- package/lib/commonjs/mol-canvas3d/passes/draw.d.ts +11 -7
- package/lib/commonjs/mol-canvas3d/passes/draw.js +29 -3
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +6 -0
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +31 -5
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +35 -40
- package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -1
- package/lib/commonjs/mol-geo/geometry/base.js +4 -1
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +4 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +4 -1
- package/lib/commonjs/mol-geo/geometry/emissive-data.d.ts +26 -0
- package/lib/commonjs/mol-geo/geometry/emissive-data.js +80 -0
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/image/image.js +4 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +3 -2
- package/lib/commonjs/mol-geo/geometry/lines/lines.js +4 -1
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +36 -2
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +11 -4
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +3 -2
- package/lib/commonjs/mol-geo/geometry/points/points.js +4 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +7 -3
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js +4 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +34 -2
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +14 -4
- package/lib/commonjs/mol-geo/util/location-iterator.d.ts +5 -2
- package/lib/commonjs/mol-geo/util/location-iterator.js +8 -3
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/image.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/lines.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/mesh.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/points.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/schema.d.ts +24 -1
- package/lib/commonjs/mol-gl/renderable/schema.js +15 -2
- package/lib/commonjs/mol-gl/renderable/spheres.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/text.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +10 -0
- package/lib/commonjs/mol-gl/renderable.d.ts +1 -1
- package/lib/commonjs/mol-gl/renderable.js +2 -2
- package/lib/commonjs/mol-gl/renderer.d.ts +2 -1
- package/lib/commonjs/mol-gl/renderer.js +58 -49
- package/lib/commonjs/mol-gl/scene.d.ts +3 -1
- package/lib/commonjs/mol-gl/scene.js +26 -1
- package/lib/commonjs/mol-gl/shader/background.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/background.frag.js +95 -94
- package/lib/commonjs/mol-gl/shader/background.vert.js +11 -11
- package/lib/commonjs/mol-gl/shader/blend-back-dpoit.frag.js +13 -13
- package/lib/commonjs/mol-gl/shader/bloom/blur.frag.d.ts +1 -0
- package/lib/commonjs/mol-gl/shader/bloom/blur.frag.js +32 -0
- package/lib/commonjs/mol-gl/shader/bloom/composite.frag.d.ts +1 -0
- package/lib/commonjs/mol-gl/shader/bloom/composite.frag.js +37 -0
- package/lib/commonjs/mol-gl/shader/bloom/luminosity.frag.d.ts +1 -0
- package/lib/commonjs/mol-gl/shader/bloom/luminosity.frag.js +56 -0
- package/lib/commonjs/mol-gl/shader/cas.frag.js +144 -144
- package/lib/commonjs/mol-gl/shader/chunks/apply-fog.glsl.js +31 -31
- package/lib/commonjs/mol-gl/shader/chunks/apply-interior-color.glsl.js +12 -12
- package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +78 -70
- package/lib/commonjs/mol-gl/shader/chunks/apply-marker-color.glsl.js +16 -16
- package/lib/commonjs/mol-gl/shader/chunks/assign-clipping-varying.glsl.js +8 -8
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +140 -112
- package/lib/commonjs/mol-gl/shader/chunks/assign-group.glsl.js +6 -6
- package/lib/commonjs/mol-gl/shader/chunks/assign-marker-varying.glsl.js +8 -8
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +112 -123
- package/lib/commonjs/mol-gl/shader/chunks/assign-position.glsl.js +14 -14
- package/lib/commonjs/mol-gl/shader/chunks/assign-size.glsl.js +18 -18
- package/lib/commonjs/mol-gl/shader/chunks/check-picking-alpha.glsl.js +12 -12
- package/lib/commonjs/mol-gl/shader/chunks/check-transparency.glsl.d.ts +1 -0
- package/lib/commonjs/mol-gl/shader/chunks/check-transparency.glsl.js +20 -0
- package/lib/commonjs/mol-gl/shader/chunks/clip-instance.glsl.js +7 -7
- package/lib/commonjs/mol-gl/shader/chunks/clip-pixel.glsl.js +5 -5
- package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js +60 -51
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +122 -92
- package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.js +104 -104
- package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.js +150 -149
- package/lib/commonjs/mol-gl/shader/chunks/common-vert-params.glsl.js +61 -61
- package/lib/commonjs/mol-gl/shader/chunks/common.glsl.js +234 -234
- package/lib/commonjs/mol-gl/shader/chunks/dpoit-write.glsl.js +62 -62
- package/lib/commonjs/mol-gl/shader/chunks/fade-lod.glsl.js +42 -42
- package/lib/commonjs/mol-gl/shader/chunks/float-to-rgba.glsl.js +39 -39
- package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.js +127 -127
- package/lib/commonjs/mol-gl/shader/chunks/matrix-scale.glsl.js +5 -5
- package/lib/commonjs/mol-gl/shader/chunks/normal-frag-params.glsl.js +2 -2
- package/lib/commonjs/mol-gl/shader/chunks/read-from-texture.glsl.js +14 -14
- package/lib/commonjs/mol-gl/shader/chunks/rgba-to-float.glsl.js +84 -84
- package/lib/commonjs/mol-gl/shader/chunks/size-vert-params.glsl.js +11 -11
- package/lib/commonjs/mol-gl/shader/chunks/texture3d-from-1d-trilinear.glsl.js +23 -23
- package/lib/commonjs/mol-gl/shader/chunks/texture3d-from-2d-linear.glsl.js +17 -17
- package/lib/commonjs/mol-gl/shader/chunks/texture3d-from-2d-nearest.glsl.js +8 -8
- package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.js +25 -25
- package/lib/commonjs/mol-gl/shader/compose.frag.js +12 -12
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +23 -23
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +43 -43
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js +15 -15
- package/lib/commonjs/mol-gl/shader/copy.frag.js +11 -11
- package/lib/commonjs/mol-gl/shader/cylinders.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/cylinders.frag.js +267 -264
- package/lib/commonjs/mol-gl/shader/cylinders.vert.js +89 -89
- package/lib/commonjs/mol-gl/shader/depth-merge.frag.js +23 -23
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +362 -356
- package/lib/commonjs/mol-gl/shader/direct-volume.vert.js +41 -41
- package/lib/commonjs/mol-gl/shader/evaluate-dpoit.frag.js +10 -10
- package/lib/commonjs/mol-gl/shader/evaluate-wboit.frag.js +17 -17
- package/lib/commonjs/mol-gl/shader/fxaa.frag.js +228 -228
- package/lib/commonjs/mol-gl/shader/gaussian-density.frag.js +49 -49
- package/lib/commonjs/mol-gl/shader/gaussian-density.vert.js +27 -27
- package/lib/commonjs/mol-gl/shader/hi-z.frag.js +18 -18
- package/lib/commonjs/mol-gl/shader/histogram-pyramid/reduction.frag.js +58 -58
- package/lib/commonjs/mol-gl/shader/histogram-pyramid/sum.frag.js +19 -19
- package/lib/commonjs/mol-gl/shader/image.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/image.frag.js +170 -161
- package/lib/commonjs/mol-gl/shader/image.vert.js +21 -21
- package/lib/commonjs/mol-gl/shader/lines.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/lines.frag.js +43 -40
- package/lib/commonjs/mol-gl/shader/lines.vert.js +117 -117
- package/lib/commonjs/mol-gl/shader/marching-cubes/active-voxels.frag.js +70 -70
- package/lib/commonjs/mol-gl/shader/marching-cubes/isosurface.frag.js +311 -311
- package/lib/commonjs/mol-gl/shader/marking/edge.frag.js +28 -28
- package/lib/commonjs/mol-gl/shader/marking/overlay.frag.js +26 -26
- package/lib/commonjs/mol-gl/shader/mesh.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/mesh.frag.js +66 -63
- package/lib/commonjs/mol-gl/shader/mesh.vert.js +49 -49
- package/lib/commonjs/mol-gl/shader/outlines.frag.js +95 -95
- package/lib/commonjs/mol-gl/shader/points.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/points.frag.js +60 -56
- package/lib/commonjs/mol-gl/shader/points.vert.js +38 -38
- package/lib/commonjs/mol-gl/shader/postprocessing.frag.js +150 -150
- package/lib/commonjs/mol-gl/shader/quad.vert.js +10 -10
- package/lib/commonjs/mol-gl/shader/shadows.frag.js +123 -123
- package/lib/commonjs/mol-gl/shader/smaa/blend.frag.js +56 -56
- package/lib/commonjs/mol-gl/shader/smaa/blend.vert.js +25 -25
- package/lib/commonjs/mol-gl/shader/smaa/edges.frag.js +66 -66
- package/lib/commonjs/mol-gl/shader/smaa/edges.vert.js +26 -26
- package/lib/commonjs/mol-gl/shader/smaa/weights.frag.js +206 -206
- package/lib/commonjs/mol-gl/shader/smaa/weights.vert.js +32 -32
- package/lib/commonjs/mol-gl/shader/spheres.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/spheres.frag.js +149 -143
- package/lib/commonjs/mol-gl/shader/spheres.vert.js +132 -132
- package/lib/commonjs/mol-gl/shader/ssao-blur.frag.d.ts +3 -2
- package/lib/commonjs/mol-gl/shader/ssao-blur.frag.js +99 -100
- package/lib/commonjs/mol-gl/shader/ssao.frag.d.ts +3 -2
- package/lib/commonjs/mol-gl/shader/ssao.frag.js +213 -174
- package/lib/commonjs/mol-gl/shader/text.frag.d.ts +2 -2
- package/lib/commonjs/mol-gl/shader/text.frag.js +86 -84
- package/lib/commonjs/mol-gl/shader/text.vert.js +85 -85
- package/lib/commonjs/mol-gl/shader/util/grid3d-template.frag.js +46 -46
- package/lib/commonjs/mol-gl/shader-code.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +24 -18
- package/lib/commonjs/mol-gl/webgl/compat.js +12 -12
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +1 -1
- package/lib/commonjs/mol-io/common/binary-cif/array-encoder.d.ts +1 -1
- package/lib/commonjs/mol-io/common/binary-cif/array-encoder.js +5 -2
- package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd-extras.d.ts +4 -4
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
- package/lib/commonjs/mol-io/reader/cif.d.ts +1 -1
- package/lib/commonjs/mol-io/writer/cif/encoder/binary.d.ts +1 -1
- package/lib/commonjs/mol-io/writer/cif/encoder/binary.js +10 -2
- package/lib/commonjs/mol-math/linear-algebra/3d/mat3.d.ts +3 -1
- package/lib/commonjs/mol-math/linear-algebra/3d/mat3.js +8 -1
- package/lib/commonjs/mol-math/linear-algebra/3d/vec3.d.ts +6 -0
- package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js +20 -0
- package/lib/commonjs/mol-model/structure/model/types/saccharides.js +1 -1
- package/lib/commonjs/mol-model/structure/structure/properties.d.ts +2 -2
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/data.d.ts +9 -6
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/data.js +1 -1
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.d.ts +1 -1
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +7 -4
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.d.ts +1 -1
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +10 -6
- package/lib/commonjs/mol-model/structure/structure/unit.d.ts +2 -2
- package/lib/commonjs/mol-model/structure/structure/unit.js +5 -2
- package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -0
- package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +118 -118
- package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +2 -2
- package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.d.ts +4 -1
- package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.js +6 -3
- package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
- package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
- package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -0
- package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
- package/lib/commonjs/mol-plugin/behavior/behavior.d.ts +6 -6
- package/lib/commonjs/mol-plugin/behavior/dynamic/camera.d.ts +3 -3
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/interactions.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/secondary-structure.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/integrative/cross-link-restraint.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/sequence/sifts-mapping.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/structure-info.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +4 -4
- package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +2 -2
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -2
- package/lib/commonjs/mol-plugin/commands.d.ts +1 -208
- package/lib/commonjs/mol-plugin/config.d.ts +5 -0
- package/lib/commonjs/mol-plugin/context.d.ts +2 -2
- package/lib/commonjs/mol-plugin/state.d.ts +6 -6
- package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/actions/structure.js +3 -5
- package/lib/commonjs/mol-plugin-state/actions/volume.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/builder/data.d.ts +4 -4
- package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +27 -27
- package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +5 -5
- package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +42 -42
- package/lib/commonjs/mol-plugin-state/builder/structure/representation.d.ts +4 -4
- package/lib/commonjs/mol-plugin-state/builder/structure.d.ts +7 -7
- package/lib/commonjs/mol-plugin-state/formats/coordinates.d.ts +8 -8
- package/lib/commonjs/mol-plugin-state/formats/shape.d.ts +8 -8
- package/lib/commonjs/mol-plugin-state/formats/topology.d.ts +12 -12
- package/lib/commonjs/mol-plugin-state/formats/volume.d.ts +33 -33
- package/lib/commonjs/mol-plugin-state/helpers/structure-emissive.d.ts +12 -0
- package/lib/commonjs/mol-plugin-state/helpers/structure-emissive.js +69 -0
- package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +3 -1
- package/lib/commonjs/mol-plugin-state/manager/structure/component.js +9 -1
- package/lib/commonjs/mol-plugin-state/manager/structure/measurement.d.ts +341 -9
- package/lib/commonjs/mol-plugin-state/manager/structure/measurement.js +32 -19
- package/lib/commonjs/mol-plugin-state/manager/structure/selection.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/manager/volume/hierarchy.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/objects.d.ts +32 -32
- package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +33 -8
- package/lib/commonjs/mol-plugin-state/transforms/representation.js +121 -6
- package/lib/commonjs/mol-plugin-state/transforms/shape.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/transforms/volume.d.ts +16 -8
- package/lib/commonjs/mol-plugin-state/transforms/volume.js +51 -2
- package/lib/commonjs/mol-plugin-ui/state/apply-action.d.ts +2 -2
- package/lib/commonjs/mol-plugin-ui/state/update-transform.d.ts +3 -3
- package/lib/commonjs/mol-repr/representation.d.ts +6 -2
- package/lib/commonjs/mol-repr/representation.js +12 -2
- package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/common.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/label.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/complex-representation.d.ts +1 -1
- package/lib/commonjs/mol-repr/structure/complex-representation.js +7 -1
- package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +8 -1
- package/lib/commonjs/mol-repr/structure/complex-visual.js +5 -1
- package/lib/commonjs/mol-repr/structure/params.d.ts +8 -0
- package/lib/commonjs/mol-repr/structure/registry.d.ts +14 -0
- package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/label.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/line.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/point.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/units-representation.d.ts +1 -1
- package/lib/commonjs/mol-repr/structure/units-representation.js +9 -3
- package/lib/commonjs/mol-repr/structure/units-visual.d.ts +9 -1
- package/lib/commonjs/mol-repr/structure/units-visual.js +5 -1
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +4 -0
- package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.js +1 -1
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-atomic-bond.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-atomic-element.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-atomic-ring-fill.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
- package/lib/commonjs/mol-repr/visual.d.ts +6 -1
- package/lib/commonjs/mol-repr/visual.js +55 -1
- package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +3 -0
- package/lib/commonjs/mol-repr/volume/isosurface.d.ts +6 -0
- package/lib/commonjs/mol-repr/volume/registry.d.ts +4 -0
- package/lib/commonjs/mol-repr/volume/representation.d.ts +2 -1
- package/lib/commonjs/mol-repr/volume/representation.js +9 -2
- package/lib/commonjs/mol-repr/volume/segment.d.ts +5 -0
- package/lib/commonjs/mol-repr/volume/slice.d.ts +3 -0
- package/lib/commonjs/mol-script/language/symbol-table/core.d.ts +3 -3
- package/lib/commonjs/mol-state/tree/immutable.d.ts +1 -1
- package/lib/commonjs/mol-state/tree/transient.d.ts +2 -2
- package/lib/commonjs/mol-theme/color/external-volume.d.ts +3 -1
- package/lib/commonjs/mol-theme/color/external-volume.js +8 -2
- package/lib/commonjs/mol-theme/color.d.ts +1 -0
- package/lib/commonjs/mol-theme/emissive.d.ts +40 -0
- package/lib/commonjs/mol-theme/emissive.js +137 -0
- package/lib/commonjs/mol-theme/substance.d.ts +1 -1
- package/lib/commonjs/mol-theme/substance.js +2 -2
- package/lib/commonjs/mol-theme/transparency.d.ts +0 -1
- package/lib/commonjs/mol-util/input/input-observer.js +2 -0
- package/lib/commonjs/mol-util/set.d.ts +1 -1
- package/lib/commonjs/mol-util/set.js +17 -1
- package/lib/commonjs/servers/common/swagger-ui/indexTemplate.js +66 -66
- package/lib/commonjs/servers/volume/config.js +5 -5
- package/lib/examples/alpha-orbitals/example-data.js +160 -160
- package/lib/examples/alpha-orbitals/index.html +72 -72
- package/lib/examples/basic-wrapper/index.html +137 -137
- package/lib/examples/lighting/index.html +88 -88
- package/lib/examples/proteopedia-wrapper/index.html +236 -236
- package/lib/extensions/alpha-orbitals/gpu/shader.frag.js +136 -136
- package/lib/extensions/alpha-orbitals/transforms.d.ts +2 -2
- package/lib/extensions/anvil/behavior.d.ts +10 -9
- package/lib/extensions/anvil/representation.d.ts +5 -0
- package/lib/extensions/assembly-symmetry/behavior.d.ts +2 -1
- package/lib/extensions/assembly-symmetry/prop.js +24 -24
- package/lib/extensions/assembly-symmetry/representation.d.ts +1 -0
- package/lib/extensions/backgrounds/index.d.ts +2 -2
- package/lib/extensions/backgrounds/index.js +2 -1
- package/lib/extensions/dnatco/behavior.d.ts +1 -1
- package/lib/extensions/dnatco/confal-pyramids/behavior.d.ts +10 -10
- package/lib/extensions/dnatco/confal-pyramids/behavior.js +5 -5
- package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
- package/lib/extensions/dnatco/ntc-tube/behavior.d.ts +10 -10
- package/lib/extensions/dnatco/ntc-tube/behavior.js +5 -5
- package/lib/extensions/dnatco/ntc-tube/representation.d.ts +3 -0
- package/lib/extensions/g3d/format.d.ts +6 -6
- package/lib/extensions/geo-export/glb-exporter.d.ts +1 -1
- package/lib/extensions/geo-export/glb-exporter.js +6 -4
- package/lib/extensions/geo-export/index.d.ts +1 -1
- package/lib/extensions/geo-export/usdz-exporter.js +41 -41
- package/lib/extensions/meshes/mesh-extension.d.ts +2 -3
- package/lib/extensions/meshes/mesh-streaming/behavior.d.ts +1 -1
- package/lib/extensions/meshes/mesh-streaming/server-info.d.ts +2 -2
- package/lib/extensions/model-archive/quality-assessment/behavior.d.ts +9 -9
- package/lib/extensions/model-export/index.d.ts +1 -1
- package/lib/extensions/mp4-export/index.d.ts +1 -1
- package/lib/extensions/mvs/behavior.d.ts +1 -1
- package/lib/extensions/mvs/camera.d.ts +2 -0
- package/lib/extensions/mvs/camera.js +27 -1
- package/lib/extensions/mvs/components/annotation-label/representation.d.ts +4 -0
- package/lib/extensions/mvs/components/annotation-label/visual.d.ts +1 -0
- package/lib/extensions/mvs/components/custom-label/representation.d.ts +4 -2
- package/lib/extensions/mvs/components/custom-label/visual.d.ts +1 -0
- package/lib/extensions/mvs/components/formats.d.ts +6 -4
- package/lib/extensions/mvs/components/formats.js +2 -1
- package/lib/extensions/mvs/load-helpers.d.ts +1 -1
- package/lib/extensions/mvs/load.d.ts +2 -0
- package/lib/extensions/mvs/load.js +13 -7
- package/lib/extensions/mvs/tree/mvs/mvs-builder.d.ts +2 -8
- package/lib/extensions/pdbe/structure-quality-report/behavior.d.ts +1 -1
- package/lib/extensions/rcsb/validation-report/behavior.d.ts +22 -22
- package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -0
- package/lib/extensions/sb-ncbr/partial-charges/behavior.d.ts +1 -1
- package/lib/extensions/sb-ncbr/partial-charges/preset.d.ts +4 -4
- package/lib/extensions/volumes-and-segmentations/entry-meshes.d.ts +1 -1
- package/lib/extensions/volumes-and-segmentations/entry-root.d.ts +5 -5
- package/lib/extensions/volumes-and-segmentations/entry-segmentation.d.ts +1 -1
- package/lib/extensions/volumes-and-segmentations/entry-state.d.ts +2 -2
- package/lib/extensions/volumes-and-segmentations/global-state.d.ts +2 -2
- package/lib/extensions/volumes-and-segmentations/helpers.d.ts +1 -1
- package/lib/extensions/volumes-and-segmentations/index.d.ts +1 -1
- package/lib/extensions/wwpdb/ccd/behavior.d.ts +1 -1
- package/lib/extensions/wwpdb/ccd/representation.d.ts +4 -4
- package/lib/extensions/zenodo/index.d.ts +1 -1
- package/lib/mol-canvas3d/canvas3d.d.ts +14 -2
- package/lib/mol-canvas3d/canvas3d.js +2 -2
- package/lib/mol-canvas3d/controls/trackball.js +1 -1
- package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -0
- package/lib/mol-canvas3d/helper/helper.d.ts +2 -0
- package/lib/mol-canvas3d/passes/background.d.ts +6 -1
- package/lib/mol-canvas3d/passes/background.js +14 -2
- package/lib/mol-canvas3d/passes/bloom.d.ts +37 -0
- package/lib/mol-canvas3d/passes/bloom.js +268 -0
- package/lib/mol-canvas3d/passes/dpoit.js +4 -2
- package/lib/mol-canvas3d/passes/draw.d.ts +11 -7
- package/lib/mol-canvas3d/passes/draw.js +30 -4
- package/lib/mol-canvas3d/passes/image.d.ts +6 -0
- package/lib/mol-canvas3d/passes/postprocessing.d.ts +31 -5
- package/lib/mol-canvas3d/passes/postprocessing.js +33 -39
- package/lib/mol-geo/geometry/base.d.ts +3 -1
- package/lib/mol-geo/geometry/base.js +4 -1
- package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +2 -1
- package/lib/mol-geo/geometry/cylinders/cylinders.js +4 -1
- package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +2 -1
- package/lib/mol-geo/geometry/direct-volume/direct-volume.js +4 -1
- package/lib/mol-geo/geometry/emissive-data.d.ts +26 -0
- package/lib/mol-geo/geometry/emissive-data.js +72 -0
- package/lib/mol-geo/geometry/image/image.d.ts +2 -1
- package/lib/mol-geo/geometry/image/image.js +4 -1
- package/lib/mol-geo/geometry/lines/lines.d.ts +3 -2
- package/lib/mol-geo/geometry/lines/lines.js +4 -1
- package/lib/mol-geo/geometry/mesh/color-smoothing.d.ts +2 -1
- package/lib/mol-geo/geometry/mesh/color-smoothing.js +34 -1
- package/lib/mol-geo/geometry/mesh/mesh.d.ts +2 -1
- package/lib/mol-geo/geometry/mesh/mesh.js +11 -4
- package/lib/mol-geo/geometry/points/points.d.ts +3 -2
- package/lib/mol-geo/geometry/points/points.js +4 -1
- package/lib/mol-geo/geometry/spheres/spheres.d.ts +2 -2
- package/lib/mol-geo/geometry/spheres/spheres.js +7 -3
- package/lib/mol-geo/geometry/text/text.d.ts +2 -1
- package/lib/mol-geo/geometry/text/text.js +4 -1
- package/lib/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +2 -1
- package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +32 -1
- package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
- package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +14 -4
- package/lib/mol-geo/util/location-iterator.d.ts +5 -2
- package/lib/mol-geo/util/location-iterator.js +8 -3
- package/lib/mol-gl/renderable/cylinders.d.ts +10 -0
- package/lib/mol-gl/renderable/direct-volume.d.ts +10 -0
- package/lib/mol-gl/renderable/image.d.ts +10 -0
- package/lib/mol-gl/renderable/lines.d.ts +10 -0
- package/lib/mol-gl/renderable/mesh.d.ts +10 -0
- package/lib/mol-gl/renderable/points.d.ts +10 -0
- package/lib/mol-gl/renderable/schema.d.ts +24 -1
- package/lib/mol-gl/renderable/schema.js +14 -1
- package/lib/mol-gl/renderable/spheres.d.ts +10 -0
- package/lib/mol-gl/renderable/text.d.ts +10 -0
- package/lib/mol-gl/renderable/texture-mesh.d.ts +10 -0
- package/lib/mol-gl/renderable.d.ts +1 -1
- package/lib/mol-gl/renderable.js +2 -2
- package/lib/mol-gl/renderer.d.ts +2 -1
- package/lib/mol-gl/renderer.js +58 -49
- package/lib/mol-gl/scene.d.ts +3 -1
- package/lib/mol-gl/scene.js +26 -1
- package/lib/mol-gl/shader/background.frag.d.ts +1 -1
- package/lib/mol-gl/shader/background.frag.js +95 -94
- package/lib/mol-gl/shader/background.vert.js +11 -11
- package/lib/mol-gl/shader/blend-back-dpoit.frag.js +13 -13
- package/lib/mol-gl/shader/bloom/blur.frag.d.ts +1 -0
- package/lib/mol-gl/shader/bloom/blur.frag.js +29 -0
- package/lib/mol-gl/shader/bloom/composite.frag.d.ts +1 -0
- package/lib/mol-gl/shader/bloom/composite.frag.js +34 -0
- package/lib/mol-gl/shader/bloom/luminosity.frag.d.ts +1 -0
- package/lib/mol-gl/shader/bloom/luminosity.frag.js +53 -0
- package/lib/mol-gl/shader/cas.frag.js +144 -144
- package/lib/mol-gl/shader/chunks/apply-fog.glsl.js +31 -31
- package/lib/mol-gl/shader/chunks/apply-interior-color.glsl.js +12 -12
- package/lib/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +2 -2
- package/lib/mol-gl/shader/chunks/apply-light-color.glsl.js +78 -70
- package/lib/mol-gl/shader/chunks/apply-marker-color.glsl.js +16 -16
- package/lib/mol-gl/shader/chunks/assign-clipping-varying.glsl.js +8 -8
- package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js +140 -112
- package/lib/mol-gl/shader/chunks/assign-group.glsl.js +6 -6
- package/lib/mol-gl/shader/chunks/assign-marker-varying.glsl.js +8 -8
- package/lib/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js +112 -123
- package/lib/mol-gl/shader/chunks/assign-position.glsl.js +14 -14
- package/lib/mol-gl/shader/chunks/assign-size.glsl.js +18 -18
- package/lib/mol-gl/shader/chunks/check-picking-alpha.glsl.js +12 -12
- package/lib/mol-gl/shader/chunks/check-transparency.glsl.d.ts +1 -0
- package/lib/mol-gl/shader/chunks/check-transparency.glsl.js +17 -0
- package/lib/mol-gl/shader/chunks/clip-instance.glsl.js +7 -7
- package/lib/mol-gl/shader/chunks/clip-pixel.glsl.js +5 -5
- package/lib/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/color-frag-params.glsl.js +60 -51
- package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +122 -92
- package/lib/mol-gl/shader/chunks/common-clip.glsl.js +104 -104
- package/lib/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/common-frag-params.glsl.js +150 -149
- package/lib/mol-gl/shader/chunks/common-vert-params.glsl.js +61 -61
- package/lib/mol-gl/shader/chunks/common.glsl.js +234 -234
- package/lib/mol-gl/shader/chunks/dpoit-write.glsl.js +62 -62
- package/lib/mol-gl/shader/chunks/fade-lod.glsl.js +42 -42
- package/lib/mol-gl/shader/chunks/float-to-rgba.glsl.js +39 -39
- package/lib/mol-gl/shader/chunks/light-frag-params.glsl.js +127 -127
- package/lib/mol-gl/shader/chunks/matrix-scale.glsl.js +5 -5
- package/lib/mol-gl/shader/chunks/normal-frag-params.glsl.js +2 -2
- package/lib/mol-gl/shader/chunks/read-from-texture.glsl.js +14 -14
- package/lib/mol-gl/shader/chunks/rgba-to-float.glsl.js +84 -84
- package/lib/mol-gl/shader/chunks/size-vert-params.glsl.js +11 -11
- package/lib/mol-gl/shader/chunks/texture3d-from-1d-trilinear.glsl.js +23 -23
- package/lib/mol-gl/shader/chunks/texture3d-from-2d-linear.glsl.js +17 -17
- package/lib/mol-gl/shader/chunks/texture3d-from-2d-nearest.glsl.js +8 -8
- package/lib/mol-gl/shader/chunks/wboit-write.glsl.js +25 -25
- package/lib/mol-gl/shader/compose.frag.js +12 -12
- package/lib/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +23 -23
- package/lib/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +43 -43
- package/lib/mol-gl/shader/compute/color-smoothing/normalize.frag.js +15 -15
- package/lib/mol-gl/shader/copy.frag.js +11 -11
- package/lib/mol-gl/shader/cylinders.frag.d.ts +2 -2
- package/lib/mol-gl/shader/cylinders.frag.js +267 -264
- package/lib/mol-gl/shader/cylinders.vert.js +89 -89
- package/lib/mol-gl/shader/depth-merge.frag.js +23 -23
- package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
- package/lib/mol-gl/shader/direct-volume.frag.js +362 -356
- package/lib/mol-gl/shader/direct-volume.vert.js +41 -41
- package/lib/mol-gl/shader/evaluate-dpoit.frag.js +10 -10
- package/lib/mol-gl/shader/evaluate-wboit.frag.js +17 -17
- package/lib/mol-gl/shader/fxaa.frag.js +228 -228
- package/lib/mol-gl/shader/gaussian-density.frag.js +49 -49
- package/lib/mol-gl/shader/gaussian-density.vert.js +27 -27
- package/lib/mol-gl/shader/hi-z.frag.js +18 -18
- package/lib/mol-gl/shader/histogram-pyramid/reduction.frag.js +58 -58
- package/lib/mol-gl/shader/histogram-pyramid/sum.frag.js +19 -19
- package/lib/mol-gl/shader/image.frag.d.ts +2 -2
- package/lib/mol-gl/shader/image.frag.js +170 -161
- package/lib/mol-gl/shader/image.vert.js +21 -21
- package/lib/mol-gl/shader/lines.frag.d.ts +2 -2
- package/lib/mol-gl/shader/lines.frag.js +43 -40
- package/lib/mol-gl/shader/lines.vert.js +117 -117
- package/lib/mol-gl/shader/marching-cubes/active-voxels.frag.js +70 -70
- package/lib/mol-gl/shader/marching-cubes/isosurface.frag.js +311 -311
- package/lib/mol-gl/shader/marking/edge.frag.js +28 -28
- package/lib/mol-gl/shader/marking/overlay.frag.js +26 -26
- package/lib/mol-gl/shader/mesh.frag.d.ts +2 -2
- package/lib/mol-gl/shader/mesh.frag.js +66 -63
- package/lib/mol-gl/shader/mesh.vert.js +49 -49
- package/lib/mol-gl/shader/outlines.frag.js +95 -95
- package/lib/mol-gl/shader/points.frag.d.ts +2 -2
- package/lib/mol-gl/shader/points.frag.js +60 -56
- package/lib/mol-gl/shader/points.vert.js +38 -38
- package/lib/mol-gl/shader/postprocessing.frag.js +150 -150
- package/lib/mol-gl/shader/quad.vert.js +10 -10
- package/lib/mol-gl/shader/shadows.frag.js +123 -123
- package/lib/mol-gl/shader/smaa/blend.frag.js +56 -56
- package/lib/mol-gl/shader/smaa/blend.vert.js +25 -25
- package/lib/mol-gl/shader/smaa/edges.frag.js +66 -66
- package/lib/mol-gl/shader/smaa/edges.vert.js +26 -26
- package/lib/mol-gl/shader/smaa/weights.frag.js +206 -206
- package/lib/mol-gl/shader/smaa/weights.vert.js +32 -32
- package/lib/mol-gl/shader/spheres.frag.d.ts +2 -2
- package/lib/mol-gl/shader/spheres.frag.js +149 -143
- package/lib/mol-gl/shader/spheres.vert.js +132 -132
- package/lib/mol-gl/shader/ssao-blur.frag.d.ts +3 -2
- package/lib/mol-gl/shader/ssao-blur.frag.js +99 -100
- package/lib/mol-gl/shader/ssao.frag.d.ts +3 -2
- package/lib/mol-gl/shader/ssao.frag.js +213 -174
- package/lib/mol-gl/shader/text.frag.d.ts +2 -2
- package/lib/mol-gl/shader/text.frag.js +86 -84
- package/lib/mol-gl/shader/text.vert.js +85 -85
- package/lib/mol-gl/shader/util/grid3d-template.frag.js +46 -46
- package/lib/mol-gl/shader-code.d.ts +1 -1
- package/lib/mol-gl/shader-code.js +24 -18
- package/lib/mol-gl/webgl/compat.js +12 -12
- package/lib/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/mol-gl/webgl/render-item.js +1 -1
- package/lib/mol-io/common/binary-cif/array-encoder.d.ts +1 -1
- package/lib/mol-io/common/binary-cif/array-encoder.js +5 -2
- package/lib/mol-io/reader/cif/schema/bird.d.ts +1 -1
- package/lib/mol-io/reader/cif/schema/bird.js +1 -1
- package/lib/mol-io/reader/cif/schema/ccd-extras.d.ts +4 -4
- package/lib/mol-io/reader/cif/schema/ccd.d.ts +1 -1
- package/lib/mol-io/reader/cif/schema/ccd.js +1 -1
- package/lib/mol-io/reader/cif/schema/mmcif.d.ts +1 -1
- package/lib/mol-io/reader/cif/schema/mmcif.js +1 -1
- package/lib/mol-io/reader/cif.d.ts +1 -1
- package/lib/mol-io/writer/cif/encoder/binary.d.ts +1 -1
- package/lib/mol-io/writer/cif/encoder/binary.js +10 -2
- package/lib/mol-math/linear-algebra/3d/mat3.d.ts +3 -1
- package/lib/mol-math/linear-algebra/3d/mat3.js +8 -1
- package/lib/mol-math/linear-algebra/3d/vec3.d.ts +6 -0
- package/lib/mol-math/linear-algebra/3d/vec3.js +20 -0
- package/lib/mol-model/structure/model/types/saccharides.js +1 -1
- package/lib/mol-model/structure/structure/properties.d.ts +2 -2
- package/lib/mol-model/structure/structure/unit/bonds/data.d.ts +9 -6
- package/lib/mol-model/structure/structure/unit/bonds/data.js +1 -1
- package/lib/mol-model/structure/structure/unit/bonds/inter-compute.d.ts +1 -1
- package/lib/mol-model/structure/structure/unit/bonds/inter-compute.js +7 -4
- package/lib/mol-model/structure/structure/unit/bonds/intra-compute.d.ts +1 -1
- package/lib/mol-model/structure/structure/unit/bonds/intra-compute.js +10 -6
- package/lib/mol-model/structure/structure/unit.d.ts +2 -2
- package/lib/mol-model/structure/structure/unit.js +5 -2
- package/lib/mol-model-formats/shape/ply.d.ts +2 -0
- package/lib/mol-model-formats/structure/basic/schema.d.ts +118 -118
- package/lib/mol-model-formats/structure/common/component.d.ts +2 -2
- package/lib/mol-model-formats/structure/property/bonds/index-pair.d.ts +4 -1
- package/lib/mol-model-formats/structure/property/bonds/index-pair.js +6 -3
- package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
- package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
- package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -0
- package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
- package/lib/mol-plugin/behavior/behavior.d.ts +6 -6
- package/lib/mol-plugin/behavior/dynamic/camera.d.ts +3 -3
- package/lib/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/custom-props/computed/interactions.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/custom-props/computed/secondary-structure.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/custom-props/integrative/cross-link-restraint.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/custom-props/sequence/sifts-mapping.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/custom-props/structure-info.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/representation.d.ts +4 -4
- package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +2 -2
- package/lib/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -2
- package/lib/mol-plugin/commands.d.ts +1 -208
- package/lib/mol-plugin/config.d.ts +5 -0
- package/lib/mol-plugin/context.d.ts +2 -2
- package/lib/mol-plugin/state.d.ts +6 -6
- package/lib/mol-plugin/version.js +2 -2
- package/lib/mol-plugin-state/actions/structure.d.ts +3 -3
- package/lib/mol-plugin-state/actions/structure.js +3 -5
- package/lib/mol-plugin-state/actions/volume.d.ts +1 -1
- package/lib/mol-plugin-state/builder/data.d.ts +4 -4
- package/lib/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +27 -27
- package/lib/mol-plugin-state/builder/structure/hierarchy.d.ts +5 -5
- package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +42 -42
- package/lib/mol-plugin-state/builder/structure/representation.d.ts +4 -4
- package/lib/mol-plugin-state/builder/structure.d.ts +7 -7
- package/lib/mol-plugin-state/formats/coordinates.d.ts +8 -8
- package/lib/mol-plugin-state/formats/shape.d.ts +8 -8
- package/lib/mol-plugin-state/formats/topology.d.ts +12 -12
- package/lib/mol-plugin-state/formats/volume.d.ts +33 -33
- package/lib/mol-plugin-state/helpers/structure-emissive.d.ts +12 -0
- package/lib/mol-plugin-state/helpers/structure-emissive.js +64 -0
- package/lib/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
- package/lib/mol-plugin-state/manager/structure/component.d.ts +3 -1
- package/lib/mol-plugin-state/manager/structure/component.js +9 -1
- package/lib/mol-plugin-state/manager/structure/measurement.d.ts +341 -9
- package/lib/mol-plugin-state/manager/structure/measurement.js +32 -19
- package/lib/mol-plugin-state/manager/structure/selection.d.ts +1 -1
- package/lib/mol-plugin-state/manager/volume/hierarchy.d.ts +1 -1
- package/lib/mol-plugin-state/objects.d.ts +32 -32
- package/lib/mol-plugin-state/transforms/representation.d.ts +33 -8
- package/lib/mol-plugin-state/transforms/representation.js +120 -5
- package/lib/mol-plugin-state/transforms/shape.d.ts +1 -1
- package/lib/mol-plugin-state/transforms/volume.d.ts +16 -8
- package/lib/mol-plugin-state/transforms/volume.js +51 -2
- package/lib/mol-plugin-ui/skin/base/base.scss +37 -37
- package/lib/mol-plugin-ui/skin/base/components/controls-base.scss +333 -333
- package/lib/mol-plugin-ui/skin/base/components/controls.scss +445 -445
- package/lib/mol-plugin-ui/skin/base/components/help.scss +27 -27
- package/lib/mol-plugin-ui/skin/base/components/line-graph.scss +67 -67
- package/lib/mol-plugin-ui/skin/base/components/log.scss +100 -100
- package/lib/mol-plugin-ui/skin/base/components/misc.scss +663 -663
- package/lib/mol-plugin-ui/skin/base/components/sequence.scss +125 -125
- package/lib/mol-plugin-ui/skin/base/components/slider.scss +165 -165
- package/lib/mol-plugin-ui/skin/base/components/tasks.scss +99 -99
- package/lib/mol-plugin-ui/skin/base/components/toast.scss +83 -83
- package/lib/mol-plugin-ui/skin/base/components/transformer.scss +163 -163
- package/lib/mol-plugin-ui/skin/base/components/viewport.scss +194 -194
- package/lib/mol-plugin-ui/skin/base/layout/common.scss +71 -71
- package/lib/mol-plugin-ui/skin/base/layout/controls-landscape.scss +89 -89
- package/lib/mol-plugin-ui/skin/base/layout/controls-outside.scss +98 -98
- package/lib/mol-plugin-ui/skin/base/layout/controls-portrait.scss +108 -108
- package/lib/mol-plugin-ui/skin/base/layout.scss +40 -40
- package/lib/mol-plugin-ui/skin/base/logo.scss +12 -12
- package/lib/mol-plugin-ui/skin/base/normalize.scss +209 -209
- package/lib/mol-plugin-ui/skin/base/ui.scss +40 -40
- package/lib/mol-plugin-ui/skin/base/variables.scss +88 -88
- package/lib/mol-plugin-ui/skin/blue.scss +1 -1
- package/lib/mol-plugin-ui/skin/colors/blue.scss +23 -23
- package/lib/mol-plugin-ui/skin/colors/dark.scss +23 -23
- package/lib/mol-plugin-ui/skin/colors/light.scss +29 -29
- package/lib/mol-plugin-ui/skin/dark.scss +1 -1
- package/lib/mol-plugin-ui/skin/light.scss +1 -1
- package/lib/mol-plugin-ui/state/apply-action.d.ts +2 -2
- package/lib/mol-plugin-ui/state/update-transform.d.ts +3 -3
- package/lib/mol-repr/representation.d.ts +6 -2
- package/lib/mol-repr/representation.js +12 -2
- package/lib/mol-repr/shape/loci/angle.d.ts +1 -0
- package/lib/mol-repr/shape/loci/common.d.ts +1 -0
- package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -0
- package/lib/mol-repr/shape/loci/distance.d.ts +1 -0
- package/lib/mol-repr/shape/loci/label.d.ts +1 -0
- package/lib/mol-repr/shape/loci/orientation.d.ts +1 -0
- package/lib/mol-repr/shape/loci/plane.d.ts +1 -0
- package/lib/mol-repr/shape/model/unitcell.d.ts +1 -0
- package/lib/mol-repr/structure/complex-representation.d.ts +1 -1
- package/lib/mol-repr/structure/complex-representation.js +7 -1
- package/lib/mol-repr/structure/complex-visual.d.ts +8 -1
- package/lib/mol-repr/structure/complex-visual.js +5 -1
- package/lib/mol-repr/structure/params.d.ts +8 -0
- package/lib/mol-repr/structure/registry.d.ts +14 -0
- package/lib/mol-repr/structure/representation/backbone.d.ts +3 -0
- package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
- package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
- package/lib/mol-repr/structure/representation/cartoon.d.ts +3 -0
- package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
- package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
- package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +3 -0
- package/lib/mol-repr/structure/representation/label.d.ts +3 -0
- package/lib/mol-repr/structure/representation/line.d.ts +3 -0
- package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
- package/lib/mol-repr/structure/representation/orientation.d.ts +3 -0
- package/lib/mol-repr/structure/representation/point.d.ts +3 -0
- package/lib/mol-repr/structure/representation/putty.d.ts +3 -0
- package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -0
- package/lib/mol-repr/structure/units-representation.d.ts +1 -1
- package/lib/mol-repr/structure/units-representation.js +9 -3
- package/lib/mol-repr/structure/units-visual.d.ts +9 -1
- package/lib/mol-repr/structure/units-visual.js +5 -1
- package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
- package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -0
- package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
- package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -0
- package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
- package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
- package/lib/mol-repr/structure/visual/element-cross.d.ts +1 -0
- package/lib/mol-repr/structure/visual/element-point.d.ts +1 -0
- package/lib/mol-repr/structure/visual/element-sphere.d.ts +4 -0
- package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -0
- package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
- package/lib/mol-repr/structure/visual/gaussian-surface-mesh.js +1 -1
- package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -0
- package/lib/mol-repr/structure/visual/label-text.d.ts +1 -0
- package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -0
- package/lib/mol-repr/structure/visual/nucleotide-atomic-bond.d.ts +2 -0
- package/lib/mol-repr/structure/visual/nucleotide-atomic-element.d.ts +2 -0
- package/lib/mol-repr/structure/visual/nucleotide-atomic-ring-fill.d.ts +1 -0
- package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
- package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
- package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
- package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
- package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
- package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
- package/lib/mol-repr/visual.d.ts +6 -1
- package/lib/mol-repr/visual.js +57 -3
- package/lib/mol-repr/volume/direct-volume.d.ts +3 -0
- package/lib/mol-repr/volume/isosurface.d.ts +6 -0
- package/lib/mol-repr/volume/registry.d.ts +4 -0
- package/lib/mol-repr/volume/representation.d.ts +2 -1
- package/lib/mol-repr/volume/representation.js +9 -2
- package/lib/mol-repr/volume/segment.d.ts +5 -0
- package/lib/mol-repr/volume/slice.d.ts +3 -0
- package/lib/mol-script/language/symbol-table/core.d.ts +3 -3
- package/lib/mol-state/tree/immutable.d.ts +1 -1
- package/lib/mol-state/tree/transient.d.ts +2 -2
- package/lib/mol-theme/color/external-volume.d.ts +3 -1
- package/lib/mol-theme/color/external-volume.js +8 -2
- package/lib/mol-theme/color.d.ts +1 -0
- package/lib/mol-theme/emissive.d.ts +40 -0
- package/lib/mol-theme/emissive.js +134 -0
- package/lib/mol-theme/substance.d.ts +1 -1
- package/lib/mol-theme/substance.js +2 -2
- package/lib/mol-theme/transparency.d.ts +0 -1
- package/lib/mol-util/input/input-observer.js +2 -0
- package/lib/mol-util/set.d.ts +1 -1
- package/lib/mol-util/set.js +17 -1
- package/lib/servers/common/swagger-ui/indexTemplate.js +66 -66
- package/lib/servers/volume/config.js +5 -5
- package/package.json +195 -193
|
@@ -3,46 +3,46 @@
|
|
|
3
3
|
*
|
|
4
4
|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
5
5
|
*/
|
|
6
|
-
export const fade_lod = `
|
|
7
|
-
if (uLod.w == 0.0 && (uLod.x != 0.0 || uLod.y != 0.0)) {
|
|
8
|
-
float d = dot(uCameraPlane.xyz, vModelPosition) + uCameraPlane.w;
|
|
9
|
-
float ta = min(
|
|
10
|
-
smoothstep(uLod.x, uLod.x + uLod.z, d),
|
|
11
|
-
1.0 - smoothstep(uLod.y - uLod.z, uLod.y, d)
|
|
12
|
-
);
|
|
13
|
-
|
|
14
|
-
#if defined(dRenderVariant_color)
|
|
15
|
-
float at = 0.0;
|
|
16
|
-
|
|
17
|
-
// shift by view-offset during multi-sample rendering to allow for blending
|
|
18
|
-
vec2 coord = gl_FragCoord.xy + uViewOffset * 0.25;
|
|
19
|
-
|
|
20
|
-
const mat4 thresholdMatrix = mat4(
|
|
21
|
-
1.0 / 17.0, 9.0 / 17.0, 3.0 / 17.0, 11.0 / 17.0,
|
|
22
|
-
13.0 / 17.0, 5.0 / 17.0, 15.0 / 17.0, 7.0 / 17.0,
|
|
23
|
-
4.0 / 17.0, 12.0 / 17.0, 2.0 / 17.0, 10.0 / 17.0,
|
|
24
|
-
16.0 / 17.0, 8.0 / 17.0, 14.0 / 17.0, 6.0 / 17.0
|
|
25
|
-
);
|
|
26
|
-
int ci = int(intMod(coord.x, 4.0));
|
|
27
|
-
int ri = int(intMod(coord.y, 4.0));
|
|
28
|
-
#if __VERSION__ == 100
|
|
29
|
-
vec4 i = vec4(float(ci * 4 + ri));
|
|
30
|
-
vec4 v = thresholdMatrix[0] * vec4(equal(i, vec4(0.0, 1.0, 2.0, 3.0))) +
|
|
31
|
-
thresholdMatrix[1] * vec4(equal(i, vec4(4.0, 5.0, 6.0, 7.0))) +
|
|
32
|
-
thresholdMatrix[2] * vec4(equal(i, vec4(8.0, 9.0, 10.0, 11.0))) +
|
|
33
|
-
thresholdMatrix[3] * vec4(equal(i, vec4(12.0, 13.0, 14.0, 15.0)));
|
|
34
|
-
at = v.x + v.y + v.z + v.w;
|
|
35
|
-
#else
|
|
36
|
-
at = thresholdMatrix[ci][ri];
|
|
37
|
-
#endif
|
|
38
|
-
|
|
39
|
-
if (ta < 0.99 && (ta < 0.01 || ta < at)) {
|
|
40
|
-
discard;
|
|
41
|
-
}
|
|
42
|
-
#else
|
|
43
|
-
if (ta < uPickingAlphaThreshold) {
|
|
44
|
-
discard;
|
|
45
|
-
}
|
|
46
|
-
#endif
|
|
47
|
-
}
|
|
6
|
+
export const fade_lod = `
|
|
7
|
+
if (uLod.w == 0.0 && (uLod.x != 0.0 || uLod.y != 0.0)) {
|
|
8
|
+
float d = dot(uCameraPlane.xyz, vModelPosition) + uCameraPlane.w;
|
|
9
|
+
float ta = min(
|
|
10
|
+
smoothstep(uLod.x, uLod.x + uLod.z, d),
|
|
11
|
+
1.0 - smoothstep(uLod.y - uLod.z, uLod.y, d)
|
|
12
|
+
);
|
|
13
|
+
|
|
14
|
+
#if defined(dRenderVariant_color)
|
|
15
|
+
float at = 0.0;
|
|
16
|
+
|
|
17
|
+
// shift by view-offset during multi-sample rendering to allow for blending
|
|
18
|
+
vec2 coord = gl_FragCoord.xy + uViewOffset * 0.25;
|
|
19
|
+
|
|
20
|
+
const mat4 thresholdMatrix = mat4(
|
|
21
|
+
1.0 / 17.0, 9.0 / 17.0, 3.0 / 17.0, 11.0 / 17.0,
|
|
22
|
+
13.0 / 17.0, 5.0 / 17.0, 15.0 / 17.0, 7.0 / 17.0,
|
|
23
|
+
4.0 / 17.0, 12.0 / 17.0, 2.0 / 17.0, 10.0 / 17.0,
|
|
24
|
+
16.0 / 17.0, 8.0 / 17.0, 14.0 / 17.0, 6.0 / 17.0
|
|
25
|
+
);
|
|
26
|
+
int ci = int(intMod(coord.x, 4.0));
|
|
27
|
+
int ri = int(intMod(coord.y, 4.0));
|
|
28
|
+
#if __VERSION__ == 100
|
|
29
|
+
vec4 i = vec4(float(ci * 4 + ri));
|
|
30
|
+
vec4 v = thresholdMatrix[0] * vec4(equal(i, vec4(0.0, 1.0, 2.0, 3.0))) +
|
|
31
|
+
thresholdMatrix[1] * vec4(equal(i, vec4(4.0, 5.0, 6.0, 7.0))) +
|
|
32
|
+
thresholdMatrix[2] * vec4(equal(i, vec4(8.0, 9.0, 10.0, 11.0))) +
|
|
33
|
+
thresholdMatrix[3] * vec4(equal(i, vec4(12.0, 13.0, 14.0, 15.0)));
|
|
34
|
+
at = v.x + v.y + v.z + v.w;
|
|
35
|
+
#else
|
|
36
|
+
at = thresholdMatrix[ci][ri];
|
|
37
|
+
#endif
|
|
38
|
+
|
|
39
|
+
if (ta < 0.99 && (ta < 0.01 || ta < at)) {
|
|
40
|
+
discard;
|
|
41
|
+
}
|
|
42
|
+
#else
|
|
43
|
+
if (ta < uPickingAlphaThreshold) {
|
|
44
|
+
discard;
|
|
45
|
+
}
|
|
46
|
+
#endif
|
|
47
|
+
}
|
|
48
48
|
`;
|
|
@@ -3,43 +3,43 @@
|
|
|
3
3
|
*
|
|
4
4
|
* @author David Sehnal <david.sehnal@gmail.com>
|
|
5
5
|
*/
|
|
6
|
-
export const float_to_rgba = `
|
|
7
|
-
// floatToRgba adapted from https://github.com/equinor/glsl-float-to-rgba
|
|
8
|
-
// MIT License, Copyright (c) 2020 Equinor
|
|
9
|
-
|
|
10
|
-
float shiftRight (float v, float amt) {
|
|
11
|
-
v = floor(v) + 0.5;
|
|
12
|
-
return floor(v / exp2(amt));
|
|
13
|
-
}
|
|
14
|
-
float shiftLeft (float v, float amt) {
|
|
15
|
-
return floor(v * exp2(amt) + 0.5);
|
|
16
|
-
}
|
|
17
|
-
float maskLast (float v, float bits) {
|
|
18
|
-
return mod(v, shiftLeft(1.0, bits));
|
|
19
|
-
}
|
|
20
|
-
float extractBits (float num, float from, float to) {
|
|
21
|
-
from = floor(from + 0.5); to = floor(to + 0.5);
|
|
22
|
-
return maskLast(shiftRight(num, from), to - from);
|
|
23
|
-
}
|
|
24
|
-
|
|
25
|
-
vec4 floatToRgba(float texelFloat, bool littleEndian) {
|
|
26
|
-
if (texelFloat == 0.0) return vec4(0.0, 0.0, 0.0, 0.0);
|
|
27
|
-
float sign = texelFloat > 0.0 ? 0.0 : 1.0;
|
|
28
|
-
texelFloat = abs(texelFloat);
|
|
29
|
-
float exponent = floor(log2(texelFloat));
|
|
30
|
-
float biased_exponent = exponent + 127.0;
|
|
31
|
-
float fraction = ((texelFloat / exp2(exponent)) - 1.0) * 8388608.0;
|
|
32
|
-
float t = biased_exponent / 2.0;
|
|
33
|
-
float last_bit_of_biased_exponent = fract(t) * 2.0;
|
|
34
|
-
float remaining_bits_of_biased_exponent = floor(t);
|
|
35
|
-
float byte4 = extractBits(fraction, 0.0, 8.0) / 255.0;
|
|
36
|
-
float byte3 = extractBits(fraction, 8.0, 16.0) / 255.0;
|
|
37
|
-
float byte2 = (last_bit_of_biased_exponent * 128.0 + extractBits(fraction, 16.0, 23.0)) / 255.0;
|
|
38
|
-
float byte1 = (sign * 128.0 + remaining_bits_of_biased_exponent) / 255.0;
|
|
39
|
-
return (
|
|
40
|
-
littleEndian
|
|
41
|
-
? vec4(byte4, byte3, byte2, byte1)
|
|
42
|
-
: vec4(byte1, byte2, byte3, byte4)
|
|
43
|
-
);
|
|
44
|
-
}
|
|
6
|
+
export const float_to_rgba = `
|
|
7
|
+
// floatToRgba adapted from https://github.com/equinor/glsl-float-to-rgba
|
|
8
|
+
// MIT License, Copyright (c) 2020 Equinor
|
|
9
|
+
|
|
10
|
+
float shiftRight (float v, float amt) {
|
|
11
|
+
v = floor(v) + 0.5;
|
|
12
|
+
return floor(v / exp2(amt));
|
|
13
|
+
}
|
|
14
|
+
float shiftLeft (float v, float amt) {
|
|
15
|
+
return floor(v * exp2(amt) + 0.5);
|
|
16
|
+
}
|
|
17
|
+
float maskLast (float v, float bits) {
|
|
18
|
+
return mod(v, shiftLeft(1.0, bits));
|
|
19
|
+
}
|
|
20
|
+
float extractBits (float num, float from, float to) {
|
|
21
|
+
from = floor(from + 0.5); to = floor(to + 0.5);
|
|
22
|
+
return maskLast(shiftRight(num, from), to - from);
|
|
23
|
+
}
|
|
24
|
+
|
|
25
|
+
vec4 floatToRgba(float texelFloat, bool littleEndian) {
|
|
26
|
+
if (texelFloat == 0.0) return vec4(0.0, 0.0, 0.0, 0.0);
|
|
27
|
+
float sign = texelFloat > 0.0 ? 0.0 : 1.0;
|
|
28
|
+
texelFloat = abs(texelFloat);
|
|
29
|
+
float exponent = floor(log2(texelFloat));
|
|
30
|
+
float biased_exponent = exponent + 127.0;
|
|
31
|
+
float fraction = ((texelFloat / exp2(exponent)) - 1.0) * 8388608.0;
|
|
32
|
+
float t = biased_exponent / 2.0;
|
|
33
|
+
float last_bit_of_biased_exponent = fract(t) * 2.0;
|
|
34
|
+
float remaining_bits_of_biased_exponent = floor(t);
|
|
35
|
+
float byte4 = extractBits(fraction, 0.0, 8.0) / 255.0;
|
|
36
|
+
float byte3 = extractBits(fraction, 8.0, 16.0) / 255.0;
|
|
37
|
+
float byte2 = (last_bit_of_biased_exponent * 128.0 + extractBits(fraction, 16.0, 23.0)) / 255.0;
|
|
38
|
+
float byte1 = (sign * 128.0 + remaining_bits_of_biased_exponent) / 255.0;
|
|
39
|
+
return (
|
|
40
|
+
littleEndian
|
|
41
|
+
? vec4(byte4, byte3, byte2, byte1)
|
|
42
|
+
: vec4(byte1, byte2, byte3, byte4)
|
|
43
|
+
);
|
|
44
|
+
}
|
|
45
45
|
`;
|
|
@@ -6,131 +6,131 @@
|
|
|
6
6
|
* adapted from three.js (https://github.com/mrdoob/three.js/)
|
|
7
7
|
* which under the MIT License, Copyright © 2010-2021 three.js authors
|
|
8
8
|
*/
|
|
9
|
-
export const light_frag_params = `
|
|
10
|
-
#if dLightCount != 0
|
|
11
|
-
uniform vec3 uLightDirection[dLightCount];
|
|
12
|
-
uniform vec3 uLightColor[dLightCount];
|
|
13
|
-
#endif
|
|
14
|
-
uniform vec3 uAmbientColor;
|
|
15
|
-
|
|
16
|
-
struct PhysicalMaterial {
|
|
17
|
-
vec3 diffuseColor;
|
|
18
|
-
float roughness;
|
|
19
|
-
vec3 specularColor;
|
|
20
|
-
float specularF90;
|
|
21
|
-
};
|
|
22
|
-
|
|
23
|
-
struct IncidentLight {
|
|
24
|
-
vec3 color;
|
|
25
|
-
vec3 direction;
|
|
26
|
-
};
|
|
27
|
-
|
|
28
|
-
struct ReflectedLight {
|
|
29
|
-
vec3 directDiffuse;
|
|
30
|
-
vec3 directSpecular;
|
|
31
|
-
vec3 indirectDiffuse;
|
|
32
|
-
vec3 indirectSpecular;
|
|
33
|
-
};
|
|
34
|
-
|
|
35
|
-
struct GeometricContext {
|
|
36
|
-
vec3 position;
|
|
37
|
-
vec3 normal;
|
|
38
|
-
vec3 viewDir;
|
|
39
|
-
};
|
|
40
|
-
|
|
41
|
-
vec3 BRDF_Lambert(const in vec3 diffuseColor) {
|
|
42
|
-
return RECIPROCAL_PI * diffuseColor;
|
|
43
|
-
}
|
|
44
|
-
|
|
45
|
-
vec3 F_Schlick(const in vec3 f0, const in float f90, const in float dotVH) {
|
|
46
|
-
// Original approximation by Christophe Schlick '94
|
|
47
|
-
// float fresnel = pow( 1.0 - dotVH, 5.0 );
|
|
48
|
-
// Optimized variant (presented by Epic at SIGGRAPH '13)
|
|
49
|
-
// https://cdn2.unrealengine.com/Resources/files/2013SiggraphPresentationsNotes-26915738.pdf
|
|
50
|
-
float fresnel = exp2((-5.55473 * dotVH - 6.98316) * dotVH);
|
|
51
|
-
return f0 * (1.0 - fresnel) + (f90 * fresnel);
|
|
52
|
-
}
|
|
53
|
-
|
|
54
|
-
// Moving Frostbite to Physically Based Rendering 3.0 - page 12, listing 2
|
|
55
|
-
// https://seblagarde.files.wordpress.com/2015/07/course_notes_moving_frostbite_to_pbr_v32.pdf
|
|
56
|
-
float V_GGX_SmithCorrelated(const in float alpha, const in float dotNL, const in float dotNV) {
|
|
57
|
-
float a2 = pow2(alpha);
|
|
58
|
-
float gv = dotNL * sqrt(a2 + (1.0 - a2) * pow2(dotNV));
|
|
59
|
-
float gl = dotNV * sqrt(a2 + (1.0 - a2) * pow2(dotNL));
|
|
60
|
-
return 0.5 / max(gv + gl, EPSILON);
|
|
61
|
-
}
|
|
62
|
-
|
|
63
|
-
// Microfacet Models for Refraction through Rough Surfaces - equation (33)
|
|
64
|
-
// http://graphicrants.blogspot.com/2013/08/specular-brdf-reference.html
|
|
65
|
-
// alpha is "roughness squared" in Disney’s reparameterization
|
|
66
|
-
float D_GGX(const in float alpha, const in float dotNH) {
|
|
67
|
-
float a2 = pow2(alpha);
|
|
68
|
-
float denom = pow2(dotNH) * (a2 - 1.0) + 1.0; // avoid alpha = 0 with dotNH = 1
|
|
69
|
-
return RECIPROCAL_PI * a2 / pow2(denom);
|
|
70
|
-
}
|
|
71
|
-
|
|
72
|
-
// GGX Distribution, Schlick Fresnel, GGX_SmithCorrelated Visibility
|
|
73
|
-
vec3 BRDF_GGX(const in vec3 lightDir, const in vec3 viewDir, const in vec3 normal, const in vec3 f0, const in float f90, const in float roughness) {
|
|
74
|
-
float alpha = pow2(roughness); // UE4's roughness
|
|
75
|
-
vec3 halfDir = normalize( lightDir + viewDir);
|
|
76
|
-
float dotNL = saturate(dot(normal, lightDir));
|
|
77
|
-
float dotNV = saturate(dot(normal, viewDir));
|
|
78
|
-
float dotNH = saturate(dot(normal, halfDir));
|
|
79
|
-
float dotVH = saturate(dot(viewDir, halfDir));
|
|
80
|
-
vec3 F = F_Schlick(f0, f90, dotVH);
|
|
81
|
-
float V = V_GGX_SmithCorrelated(alpha, dotNL, dotNV);
|
|
82
|
-
float D = D_GGX(alpha, dotNH);
|
|
83
|
-
return F * (V * D);
|
|
84
|
-
}
|
|
85
|
-
|
|
86
|
-
// Analytical approximation of the DFG LUT, one half of the
|
|
87
|
-
// split-sum approximation used in indirect specular lighting.
|
|
88
|
-
// via 'environmentBRDF' from "Physically Based Shading on Mobile"
|
|
89
|
-
// https://www.unrealengine.com/blog/physically-based-shading-on-mobile
|
|
90
|
-
vec2 DFGApprox(const in vec3 normal, const in vec3 viewDir, const in float roughness) {
|
|
91
|
-
float dotNV = saturate(dot(normal, viewDir));
|
|
92
|
-
const vec4 c0 = vec4(-1, -0.0275, -0.572, 0.022);
|
|
93
|
-
const vec4 c1 = vec4(1, 0.0425, 1.04, -0.04);
|
|
94
|
-
vec4 r = roughness * c0 + c1;
|
|
95
|
-
float a004 = min(r.x * r.x, exp2(-9.28 * dotNV)) * r.x + r.y;
|
|
96
|
-
vec2 fab = vec2(-1.04, 1.04) * a004 + r.zw;
|
|
97
|
-
return fab;
|
|
98
|
-
}
|
|
99
|
-
|
|
100
|
-
// Fdez-Agüera's "Multiple-Scattering Microfacet Model for Real-Time Image Based Lighting"
|
|
101
|
-
// Approximates multiscattering in order to preserve energy.
|
|
102
|
-
// http://www.jcgt.org/published/0008/01/03/
|
|
103
|
-
void computeMultiscattering(const in vec3 normal, const in vec3 viewDir, const in vec3 specularColor, const in float specularF90, const in float roughness, inout vec3 singleScatter, inout vec3 multiScatter) {
|
|
104
|
-
vec2 fab = DFGApprox(normal, viewDir, roughness);
|
|
105
|
-
vec3 FssEss = specularColor * fab.x + specularF90 * fab.y;
|
|
106
|
-
float Ess = fab.x + fab.y;
|
|
107
|
-
float Ems = 1.0 - Ess;
|
|
108
|
-
vec3 Favg = specularColor + (1.0 - specularColor) * 0.047619; // 1/21
|
|
109
|
-
vec3 Fms = FssEss * Favg / (1.0 - Ems * Favg);
|
|
110
|
-
singleScatter += FssEss;
|
|
111
|
-
multiScatter += Fms * Ems;
|
|
112
|
-
}
|
|
113
|
-
|
|
114
|
-
void RE_Direct_Physical(const in IncidentLight directLight, const in GeometricContext geometry, const in PhysicalMaterial material, inout ReflectedLight reflectedLight) {
|
|
115
|
-
float dotNL = saturate(dot(geometry.normal, directLight.direction));
|
|
116
|
-
vec3 irradiance = dotNL * directLight.color;
|
|
117
|
-
reflectedLight.directSpecular += irradiance * BRDF_GGX(directLight.direction, geometry.viewDir, geometry.normal, material.specularColor, material.specularF90, material.roughness);
|
|
118
|
-
reflectedLight.directDiffuse += irradiance * BRDF_Lambert(material.diffuseColor);
|
|
119
|
-
}
|
|
120
|
-
|
|
121
|
-
void RE_IndirectDiffuse_Physical(const in vec3 irradiance, const in GeometricContext geometry, const in PhysicalMaterial material, inout ReflectedLight reflectedLight) {
|
|
122
|
-
reflectedLight.indirectDiffuse += irradiance * BRDF_Lambert(material.diffuseColor);
|
|
123
|
-
}
|
|
124
|
-
|
|
125
|
-
void RE_IndirectSpecular_Physical( const in vec3 radiance, const in vec3 irradiance, const in vec3 clearcoatRadiance, const in GeometricContext geometry, const in PhysicalMaterial material, inout ReflectedLight reflectedLight) {
|
|
126
|
-
// Both indirect specular and indirect diffuse light accumulate here
|
|
127
|
-
vec3 singleScattering = vec3(0.0);
|
|
128
|
-
vec3 multiScattering = vec3(0.0);
|
|
129
|
-
vec3 cosineWeightedIrradiance = irradiance * RECIPROCAL_PI;
|
|
130
|
-
computeMultiscattering(geometry.normal, geometry.viewDir, material.specularColor, material.specularF90, material.roughness, singleScattering, multiScattering);
|
|
131
|
-
vec3 diffuse = material.diffuseColor * (1.0 - ( singleScattering + multiScattering));
|
|
132
|
-
reflectedLight.indirectSpecular += radiance * singleScattering;
|
|
133
|
-
reflectedLight.indirectSpecular += multiScattering * cosineWeightedIrradiance;
|
|
134
|
-
reflectedLight.indirectDiffuse += diffuse * cosineWeightedIrradiance;
|
|
135
|
-
}
|
|
9
|
+
export const light_frag_params = `
|
|
10
|
+
#if dLightCount != 0
|
|
11
|
+
uniform vec3 uLightDirection[dLightCount];
|
|
12
|
+
uniform vec3 uLightColor[dLightCount];
|
|
13
|
+
#endif
|
|
14
|
+
uniform vec3 uAmbientColor;
|
|
15
|
+
|
|
16
|
+
struct PhysicalMaterial {
|
|
17
|
+
vec3 diffuseColor;
|
|
18
|
+
float roughness;
|
|
19
|
+
vec3 specularColor;
|
|
20
|
+
float specularF90;
|
|
21
|
+
};
|
|
22
|
+
|
|
23
|
+
struct IncidentLight {
|
|
24
|
+
vec3 color;
|
|
25
|
+
vec3 direction;
|
|
26
|
+
};
|
|
27
|
+
|
|
28
|
+
struct ReflectedLight {
|
|
29
|
+
vec3 directDiffuse;
|
|
30
|
+
vec3 directSpecular;
|
|
31
|
+
vec3 indirectDiffuse;
|
|
32
|
+
vec3 indirectSpecular;
|
|
33
|
+
};
|
|
34
|
+
|
|
35
|
+
struct GeometricContext {
|
|
36
|
+
vec3 position;
|
|
37
|
+
vec3 normal;
|
|
38
|
+
vec3 viewDir;
|
|
39
|
+
};
|
|
40
|
+
|
|
41
|
+
vec3 BRDF_Lambert(const in vec3 diffuseColor) {
|
|
42
|
+
return RECIPROCAL_PI * diffuseColor;
|
|
43
|
+
}
|
|
44
|
+
|
|
45
|
+
vec3 F_Schlick(const in vec3 f0, const in float f90, const in float dotVH) {
|
|
46
|
+
// Original approximation by Christophe Schlick '94
|
|
47
|
+
// float fresnel = pow( 1.0 - dotVH, 5.0 );
|
|
48
|
+
// Optimized variant (presented by Epic at SIGGRAPH '13)
|
|
49
|
+
// https://cdn2.unrealengine.com/Resources/files/2013SiggraphPresentationsNotes-26915738.pdf
|
|
50
|
+
float fresnel = exp2((-5.55473 * dotVH - 6.98316) * dotVH);
|
|
51
|
+
return f0 * (1.0 - fresnel) + (f90 * fresnel);
|
|
52
|
+
}
|
|
53
|
+
|
|
54
|
+
// Moving Frostbite to Physically Based Rendering 3.0 - page 12, listing 2
|
|
55
|
+
// https://seblagarde.files.wordpress.com/2015/07/course_notes_moving_frostbite_to_pbr_v32.pdf
|
|
56
|
+
float V_GGX_SmithCorrelated(const in float alpha, const in float dotNL, const in float dotNV) {
|
|
57
|
+
float a2 = pow2(alpha);
|
|
58
|
+
float gv = dotNL * sqrt(a2 + (1.0 - a2) * pow2(dotNV));
|
|
59
|
+
float gl = dotNV * sqrt(a2 + (1.0 - a2) * pow2(dotNL));
|
|
60
|
+
return 0.5 / max(gv + gl, EPSILON);
|
|
61
|
+
}
|
|
62
|
+
|
|
63
|
+
// Microfacet Models for Refraction through Rough Surfaces - equation (33)
|
|
64
|
+
// http://graphicrants.blogspot.com/2013/08/specular-brdf-reference.html
|
|
65
|
+
// alpha is "roughness squared" in Disney’s reparameterization
|
|
66
|
+
float D_GGX(const in float alpha, const in float dotNH) {
|
|
67
|
+
float a2 = pow2(alpha);
|
|
68
|
+
float denom = pow2(dotNH) * (a2 - 1.0) + 1.0; // avoid alpha = 0 with dotNH = 1
|
|
69
|
+
return RECIPROCAL_PI * a2 / pow2(denom);
|
|
70
|
+
}
|
|
71
|
+
|
|
72
|
+
// GGX Distribution, Schlick Fresnel, GGX_SmithCorrelated Visibility
|
|
73
|
+
vec3 BRDF_GGX(const in vec3 lightDir, const in vec3 viewDir, const in vec3 normal, const in vec3 f0, const in float f90, const in float roughness) {
|
|
74
|
+
float alpha = pow2(roughness); // UE4's roughness
|
|
75
|
+
vec3 halfDir = normalize( lightDir + viewDir);
|
|
76
|
+
float dotNL = saturate(dot(normal, lightDir));
|
|
77
|
+
float dotNV = saturate(dot(normal, viewDir));
|
|
78
|
+
float dotNH = saturate(dot(normal, halfDir));
|
|
79
|
+
float dotVH = saturate(dot(viewDir, halfDir));
|
|
80
|
+
vec3 F = F_Schlick(f0, f90, dotVH);
|
|
81
|
+
float V = V_GGX_SmithCorrelated(alpha, dotNL, dotNV);
|
|
82
|
+
float D = D_GGX(alpha, dotNH);
|
|
83
|
+
return F * (V * D);
|
|
84
|
+
}
|
|
85
|
+
|
|
86
|
+
// Analytical approximation of the DFG LUT, one half of the
|
|
87
|
+
// split-sum approximation used in indirect specular lighting.
|
|
88
|
+
// via 'environmentBRDF' from "Physically Based Shading on Mobile"
|
|
89
|
+
// https://www.unrealengine.com/blog/physically-based-shading-on-mobile
|
|
90
|
+
vec2 DFGApprox(const in vec3 normal, const in vec3 viewDir, const in float roughness) {
|
|
91
|
+
float dotNV = saturate(dot(normal, viewDir));
|
|
92
|
+
const vec4 c0 = vec4(-1, -0.0275, -0.572, 0.022);
|
|
93
|
+
const vec4 c1 = vec4(1, 0.0425, 1.04, -0.04);
|
|
94
|
+
vec4 r = roughness * c0 + c1;
|
|
95
|
+
float a004 = min(r.x * r.x, exp2(-9.28 * dotNV)) * r.x + r.y;
|
|
96
|
+
vec2 fab = vec2(-1.04, 1.04) * a004 + r.zw;
|
|
97
|
+
return fab;
|
|
98
|
+
}
|
|
99
|
+
|
|
100
|
+
// Fdez-Agüera's "Multiple-Scattering Microfacet Model for Real-Time Image Based Lighting"
|
|
101
|
+
// Approximates multiscattering in order to preserve energy.
|
|
102
|
+
// http://www.jcgt.org/published/0008/01/03/
|
|
103
|
+
void computeMultiscattering(const in vec3 normal, const in vec3 viewDir, const in vec3 specularColor, const in float specularF90, const in float roughness, inout vec3 singleScatter, inout vec3 multiScatter) {
|
|
104
|
+
vec2 fab = DFGApprox(normal, viewDir, roughness);
|
|
105
|
+
vec3 FssEss = specularColor * fab.x + specularF90 * fab.y;
|
|
106
|
+
float Ess = fab.x + fab.y;
|
|
107
|
+
float Ems = 1.0 - Ess;
|
|
108
|
+
vec3 Favg = specularColor + (1.0 - specularColor) * 0.047619; // 1/21
|
|
109
|
+
vec3 Fms = FssEss * Favg / (1.0 - Ems * Favg);
|
|
110
|
+
singleScatter += FssEss;
|
|
111
|
+
multiScatter += Fms * Ems;
|
|
112
|
+
}
|
|
113
|
+
|
|
114
|
+
void RE_Direct_Physical(const in IncidentLight directLight, const in GeometricContext geometry, const in PhysicalMaterial material, inout ReflectedLight reflectedLight) {
|
|
115
|
+
float dotNL = saturate(dot(geometry.normal, directLight.direction));
|
|
116
|
+
vec3 irradiance = dotNL * directLight.color;
|
|
117
|
+
reflectedLight.directSpecular += irradiance * BRDF_GGX(directLight.direction, geometry.viewDir, geometry.normal, material.specularColor, material.specularF90, material.roughness);
|
|
118
|
+
reflectedLight.directDiffuse += irradiance * BRDF_Lambert(material.diffuseColor);
|
|
119
|
+
}
|
|
120
|
+
|
|
121
|
+
void RE_IndirectDiffuse_Physical(const in vec3 irradiance, const in GeometricContext geometry, const in PhysicalMaterial material, inout ReflectedLight reflectedLight) {
|
|
122
|
+
reflectedLight.indirectDiffuse += irradiance * BRDF_Lambert(material.diffuseColor);
|
|
123
|
+
}
|
|
124
|
+
|
|
125
|
+
void RE_IndirectSpecular_Physical( const in vec3 radiance, const in vec3 irradiance, const in vec3 clearcoatRadiance, const in GeometricContext geometry, const in PhysicalMaterial material, inout ReflectedLight reflectedLight) {
|
|
126
|
+
// Both indirect specular and indirect diffuse light accumulate here
|
|
127
|
+
vec3 singleScattering = vec3(0.0);
|
|
128
|
+
vec3 multiScattering = vec3(0.0);
|
|
129
|
+
vec3 cosineWeightedIrradiance = irradiance * RECIPROCAL_PI;
|
|
130
|
+
computeMultiscattering(geometry.normal, geometry.viewDir, material.specularColor, material.specularF90, material.roughness, singleScattering, multiScattering);
|
|
131
|
+
vec3 diffuse = material.diffuseColor * (1.0 - ( singleScattering + multiScattering));
|
|
132
|
+
reflectedLight.indirectSpecular += radiance * singleScattering;
|
|
133
|
+
reflectedLight.indirectSpecular += multiScattering * cosineWeightedIrradiance;
|
|
134
|
+
reflectedLight.indirectDiffuse += diffuse * cosineWeightedIrradiance;
|
|
135
|
+
}
|
|
136
136
|
`;
|
|
@@ -3,9 +3,9 @@
|
|
|
3
3
|
*
|
|
4
4
|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
5
5
|
*/
|
|
6
|
-
export const matrix_scale = `
|
|
7
|
-
float matrixScale(in mat4 m){
|
|
8
|
-
vec4 r = m[0];
|
|
9
|
-
return sqrt(r[0] * r[0] + r[1] * r[1] + r[2] * r[2]);
|
|
10
|
-
}
|
|
6
|
+
export const matrix_scale = `
|
|
7
|
+
float matrixScale(in mat4 m){
|
|
8
|
+
vec4 r = m[0];
|
|
9
|
+
return sqrt(r[0] * r[0] + r[1] * r[1] + r[2] * r[2]);
|
|
10
|
+
}
|
|
11
11
|
`;
|
|
@@ -1,3 +1,3 @@
|
|
|
1
|
-
export const normal_frag_params = `
|
|
2
|
-
varying vec3 vNormal;
|
|
1
|
+
export const normal_frag_params = `
|
|
2
|
+
varying vec3 vNormal;
|
|
3
3
|
`;
|
|
@@ -3,18 +3,18 @@
|
|
|
3
3
|
*
|
|
4
4
|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
5
5
|
*/
|
|
6
|
-
export const read_from_texture = `
|
|
7
|
-
vec4 readFromTexture(const in sampler2D tex, const in float i, const in vec2 dim) {
|
|
8
|
-
float x = intMod(i, dim.x);
|
|
9
|
-
float y = floor(intDiv(i, dim.x));
|
|
10
|
-
vec2 uv = (vec2(x, y) + 0.5) / dim;
|
|
11
|
-
return texture2D(tex, uv);
|
|
12
|
-
}
|
|
13
|
-
|
|
14
|
-
vec4 readFromTexture(const in sampler2D tex, const in int i, const in vec2 dim) {
|
|
15
|
-
int x = imod(i, int(dim.x));
|
|
16
|
-
int y = i / int(dim.x);
|
|
17
|
-
vec2 uv = (vec2(x, y) + 0.5) / dim;
|
|
18
|
-
return texture2D(tex, uv);
|
|
19
|
-
}
|
|
6
|
+
export const read_from_texture = `
|
|
7
|
+
vec4 readFromTexture(const in sampler2D tex, const in float i, const in vec2 dim) {
|
|
8
|
+
float x = intMod(i, dim.x);
|
|
9
|
+
float y = floor(intDiv(i, dim.x));
|
|
10
|
+
vec2 uv = (vec2(x, y) + 0.5) / dim;
|
|
11
|
+
return texture2D(tex, uv);
|
|
12
|
+
}
|
|
13
|
+
|
|
14
|
+
vec4 readFromTexture(const in sampler2D tex, const in int i, const in vec2 dim) {
|
|
15
|
+
int x = imod(i, int(dim.x));
|
|
16
|
+
int y = i / int(dim.x);
|
|
17
|
+
vec2 uv = (vec2(x, y) + 0.5) / dim;
|
|
18
|
+
return texture2D(tex, uv);
|
|
19
|
+
}
|
|
20
20
|
`;
|