npm - molstar - Versions diffs - 2.3.7 → 2.4.1 - Mend

molstar 2.3.7 → 2.4.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1699) hide show

package/lib/examples/basic-wrapper/superposition.js CHANGED Viewed

@@ -23,13 +23,13 @@ export function buildStaticSuperposition(plugin, src) {
                 case 1:
                     if (!(_i < src_1.length)) return [3 /*break*/, 7];
                     s = src_1[_i];
-                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/" + s.pdbId + "_updated.cif", 'mmcif')];
+                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/".concat(s.pdbId, "_updated.cif"), 'mmcif')];
                 case 2:
                     structure = (_a.sent()).structure;
                     return [4 /*yield*/, transform(plugin, structure, s.matrix)];
                 case 3:
                     _a.sent();
-                    return [4 /*yield*/, plugin.builders.structure.tryCreateComponentFromExpression(structure, chainSelection(s.auth_asym_id), "Chain " + s.auth_asym_id)];
+                    return [4 /*yield*/, plugin.builders.structure.tryCreateComponentFromExpression(structure, chainSelection(s.auth_asym_id), "Chain ".concat(s.auth_asym_id))];
                 case 4:
                     chain = _a.sent();
                     if (!chain) return [3 /*break*/, 6];
@@ -78,7 +78,7 @@ export function dynamicSuperpositionTest(plugin, src, comp_id) {
                 case 1:
                     if (!(_i < src_2.length)) return [3 /*break*/, 4];
                     s = src_2[_i];
-                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/" + s + "_updated.cif", 'mmcif')];
+                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/".concat(s, "_updated.cif"), 'mmcif')];
                 case 2:
                     _a.sent();
                     _a.label = 3;

package/lib/examples/basic-wrapper/superposition.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/examples/domain-annotation-server/mapping.js CHANGED Viewed

@@ -28,8 +28,8 @@ export function createMapping(allData) {
 function writeDomain(enc, domain) {
     if (!domain)
         return;
-    enc.writeCategory({ name: "pdbx_" + domain.name + "_domain_annotation", instance: function () { return CifWriter.Category.ofTable(domain.domains); } });
-    enc.writeCategory({ name: "pdbx_" + domain.name + "_domain_mapping", instance: function () { return CifWriter.Category.ofTable(domain.mappings); } });
+    enc.writeCategory({ name: "pdbx_".concat(domain.name, "_domain_annotation"), instance: function () { return CifWriter.Category.ofTable(domain.domains); } });
+    enc.writeCategory({ name: "pdbx_".concat(domain.name, "_domain_mapping"), instance: function () { return CifWriter.Category.ofTable(domain.mappings); } });
 }
 function getSources(data) {
     var rows = [];

package/lib/examples/domain-annotation-server/mapping.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"mapping.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,KAAK,EAAE,MAAM,mBAAmB,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACpD,OAAO,KAAK,CAAC,MAAM,WAAW,CAAC;AAC/B,wDAAwD;AAExD,MAAM,UAAU,aAAa,CAAC,OAAY;IACtC,IAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IAClC,IAAM,GAAG,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IACtC,GAAG,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE5B,IAAI,CAAC,IAAI,CAAC,MAAM;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAEvC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE9B,IAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAE7C,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,gCAAgC,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,EAAnC,CAAmC,EAAE,CAAC,CAAC;IAEnH,KAAkB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAxC,IAAM,GAAG,SAAA;QACV,WAAW,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,EAAG,CAAC,CAAC,UAAkB,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC;KACtE;IACD,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;AACzB,CAAC;AASD,SAAS,WAAW,CAAC,GAAsB,EAAE,MAAoC;IAC7E,IAAI,CAAC,MAAM;QAAE,OAAO;IACpB,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,~~UAAQ~~,MAAM,CAAC,IAAI,uBAAoB,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,EAA1C,CAA0C,EAAE,CAAC,CAAC;IACjI,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,~~UAAQ~~,MAAM,CAAC,IAAI,oBAAiB,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,EAA3C,CAA2C,EAAE,CAAC,CAAC;AACnI,CAAC;AAED,SAAS,UAAU,CAAC,IAAS;IACzB,IAAM,IAAI,GAA2B,EAAE,CAAC;IACxC,KAAmB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAzC,IAAM,MAAI,SAAA;QACX,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC;YAAE,SAAS;QAC1B,IAAM,GAAG,GAAyB,EAAE,EAAE,EAAE,MAAI,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;QACtF,IAAI,GAAG,CAAC,KAAK,GAAG,CAAC;YAAE,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;KACrC;IACD,OAAO,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;AACzC,CAAC;AAED,SAAS,WAAW,CAAC,OAAe,EAAE,QAAgB,EAAE,QAAa;IACjE,IAAM,IAAI,GAAiB,EAAE,CAAC;IAE9B,IAAM,CAAC,GAAG,UAAC,CAAM,IAAK,OAAA,CAAC,KAAK,IAAI,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,EAAvB,CAAuB,CAAC;IAE9C,KAAoB,UAAQ,EAAR,qBAAQ,EAAR,sBAAQ,EAAR,IAAQ,EAAE;QAAzB,IAAM,KAAK,iBAAA;QACZ,IAAI,KAAK,CAAC,KAAK,IAAI,KAAK,CAAC,GAAG,EAAE;YAC1B,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;gBAC5B,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC;gBAC/C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,qBAAqB,CAAC;gBACrD,qBAAqB,EAAE,KAAK,CAAC,KAAK,CAAC,qBAAqB;gBACxD,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,cAAc,CAAC;gBAC7C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,qBAAqB,CAAC;gBACnD,qBAAqB,EAAE,KAAK,CAAC,GAAG,CAAC,qBAAqB;aACzD,CAAC,CAAC;SACN;aAAM;YACH,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;aACxB,CAAC,CAAC;SACb;KACJ;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,aAAa,CAAC,EAAU,EAAE,gBAAwB,EAAE,IAAS,EAAE,MAAW;IAC/E,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAgB,UAAmB,EAAnB,KAAA,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,EAAnB,cAAmB,EAAnB,IAAmB;QAA9B,IAAM,CAAC,SAAA;QAAyB,KAAK,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;KAAA;IACxD,kBAAS,EAAE,IAAA,EAAE,gBAAgB,kBAAA,EAAE,UAAU,EAAE,IAAI,CAAC,UAAU,IAAK,KAAK,EAAG;AAC3E,CAAC;AAED,SAAS,SAAS,CAAC,IAAY,EAAE,MAAW,EAAE,OAAY;IACtD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC,CAAC;IAElC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAE3B,IAAM,OAAO,GAAU,EAAE,CAAC;IAC1B,IAAM,QAAQ,GAAiB,EAAE,CAAC;IAElC,IAAI,eAAe,GAAG,CAAC,EAAE,gBAAgB,GAAG,CAAC,CAAC;IAE9C,KAAiB,UAAiB,EAAjB,KAAA,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;QAA/B,IAAM,EAAE,SAAA;QACT,IAAM,MAAM,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC;QACxB,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,EAAE,EAAE,gBAAgB,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;QAClE,QAAQ,CAAC,IAAI,OAAb,QAAQ,EAAS,WAAW,CAAC,eAAe,EAAE,gBAAgB,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE;QAClF,eAAe,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;QACtC,gBAAgB,EAAE,CAAC;KACtB;IAED,OAAO,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,MAAA;QACJ,OAAO,EAAE,KAAK,CAAC,MAAM,uBAAM,CAAC,CAAC,IAAI,GAAK,MAAM,GAAI,OAAO,CAAC;QACxD,QAAQ,EAAE,KAAK,CAAC,MAAM,CAAY,CAAC,CAAC,OAAO,EAAE,QAAQ,CAAC;KACzD,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;AACf,CAAC"}
1	+ {"version":3,"file":"mapping.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,KAAK,EAAE,MAAM,mBAAmB,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACpD,OAAO,KAAK,CAAC,MAAM,WAAW,CAAC;AAC/B,wDAAwD;AAExD,MAAM,UAAU,aAAa,CAAC,OAAY;IACtC,IAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IAClC,IAAM,GAAG,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IACtC,GAAG,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE5B,IAAI,CAAC,IAAI,CAAC,MAAM;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAEvC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE9B,IAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAE7C,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,gCAAgC,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,EAAnC,CAAmC,EAAE,CAAC,CAAC;IAEnH,KAAkB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAxC,IAAM,GAAG,SAAA;QACV,WAAW,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,EAAG,CAAC,CAAC,UAAkB,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC;KACtE;IACD,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;AACzB,CAAC;AASD,SAAS,WAAW,CAAC,GAAsB,EAAE,MAAoC;IAC7E,IAAI,CAAC,MAAM;QAAE,OAAO;IACpB,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,eAAQ,MAAM,CAAC,IAAI,uBAAoB,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,EAA1C,CAA0C,EAAE,CAAC,CAAC;IACjI,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,eAAQ,MAAM,CAAC,IAAI,oBAAiB,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,EAA3C,CAA2C,EAAE,CAAC,CAAC;AACnI,CAAC;AAED,SAAS,UAAU,CAAC,IAAS;IACzB,IAAM,IAAI,GAA2B,EAAE,CAAC;IACxC,KAAmB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAzC,IAAM,MAAI,SAAA;QACX,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC;YAAE,SAAS;QAC1B,IAAM,GAAG,GAAyB,EAAE,EAAE,EAAE,MAAI,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;QACtF,IAAI,GAAG,CAAC,KAAK,GAAG,CAAC;YAAE,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;KACrC;IACD,OAAO,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;AACzC,CAAC;AAED,SAAS,WAAW,CAAC,OAAe,EAAE,QAAgB,EAAE,QAAa;IACjE,IAAM,IAAI,GAAiB,EAAE,CAAC;IAE9B,IAAM,CAAC,GAAG,UAAC,CAAM,IAAK,OAAA,CAAC,KAAK,IAAI,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,EAAvB,CAAuB,CAAC;IAE9C,KAAoB,UAAQ,EAAR,qBAAQ,EAAR,sBAAQ,EAAR,IAAQ,EAAE;QAAzB,IAAM,KAAK,iBAAA;QACZ,IAAI,KAAK,CAAC,KAAK,IAAI,KAAK,CAAC,GAAG,EAAE;YAC1B,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;gBAC5B,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC;gBAC/C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,qBAAqB,CAAC;gBACrD,qBAAqB,EAAE,KAAK,CAAC,KAAK,CAAC,qBAAqB;gBACxD,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,cAAc,CAAC;gBAC7C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,qBAAqB,CAAC;gBACnD,qBAAqB,EAAE,KAAK,CAAC,GAAG,CAAC,qBAAqB;aACzD,CAAC,CAAC;SACN;aAAM;YACH,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;aACxB,CAAC,CAAC;SACb;KACJ;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,aAAa,CAAC,EAAU,EAAE,gBAAwB,EAAE,IAAS,EAAE,MAAW;IAC/E,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAgB,UAAmB,EAAnB,KAAA,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,EAAnB,cAAmB,EAAnB,IAAmB;QAA9B,IAAM,CAAC,SAAA;QAAyB,KAAK,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;KAAA;IACxD,kBAAS,EAAE,IAAA,EAAE,gBAAgB,kBAAA,EAAE,UAAU,EAAE,IAAI,CAAC,UAAU,IAAK,KAAK,EAAG;AAC3E,CAAC;AAED,SAAS,SAAS,CAAC,IAAY,EAAE,MAAW,EAAE,OAAY;IACtD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC,CAAC;IAElC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAE3B,IAAM,OAAO,GAAU,EAAE,CAAC;IAC1B,IAAM,QAAQ,GAAiB,EAAE,CAAC;IAElC,IAAI,eAAe,GAAG,CAAC,EAAE,gBAAgB,GAAG,CAAC,CAAC;IAE9C,KAAiB,UAAiB,EAAjB,KAAA,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;QAA/B,IAAM,EAAE,SAAA;QACT,IAAM,MAAM,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC;QACxB,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,EAAE,EAAE,gBAAgB,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;QAClE,QAAQ,CAAC,IAAI,OAAb,QAAQ,EAAS,WAAW,CAAC,eAAe,EAAE,gBAAgB,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE;QAClF,eAAe,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;QACtC,gBAAgB,EAAE,CAAC;KACtB;IAED,OAAO,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,MAAA;QACJ,OAAO,EAAE,KAAK,CAAC,MAAM,uBAAM,CAAC,CAAC,IAAI,GAAK,MAAM,GAAI,OAAO,CAAC;QACxD,QAAQ,EAAE,KAAK,CAAC,MAAM,CAAY,CAAC,CAAC,OAAO,EAAE,QAAQ,CAAC;KACzD,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;AACf,CAAC"}

package/lib/examples/domain-annotation-server/server.js CHANGED Viewed

@@ -12,7 +12,7 @@ function getMappings(id) {
         var data, json;
         return __generator(this, function (_a) {
             switch (_a.label) {
-                case 0: return [4 /*yield*/, fetch("https://www.ebi.ac.uk/pdbe/api/mappings/" + id)];
+                case 0: return [4 /*yield*/, fetch("https://www.ebi.ac.uk/pdbe/api/mappings/".concat(id))];
                 case 1:
                     data = _a.sent();
                     return [4 /*yield*/, data.json()];
@@ -27,7 +27,7 @@ function getMappings(id) {
 var PORT = process.env.port || 1338;
 var app = express();
 var PREFIX = '/';
-app.get(PREFIX + "/:id", function (req, res) { return __awaiter(void 0, void 0, void 0, function () {
+app.get("".concat(PREFIX, "/:id"), function (req, res) { return __awaiter(void 0, void 0, void 0, function () {
     var mapping, _a;
     return __generator(this, function (_b) {
         switch (_b.label) {
@@ -54,7 +54,7 @@ app.get(PREFIX + "/:id", function (req, res) { return __awaiter(void 0, void 0,
         }
     });
 }); });
-app.get("" + PREFIX, function (req, res) {
+app.get("".concat(PREFIX), function (req, res) {
     res.writeHead(200, { 'Content-Type': 'text/plain; charset=utf-8' });
     res.end('Usage: /pdb_id, e.g. /1tqn');
 });

package/lib/examples/domain-annotation-server/server.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"server.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/server.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,OAAO,MAAM,SAAS,CAAC;AAC9B,OAAO,KAAK,MAAM,YAAY,CAAC;AAC/B,OAAO,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AAE1C,SAAe,WAAW,CAAC,EAAU;;;;;wBACpB,qBAAM,KAAK,CAAC,~~6CAA2C~~,~~EAAI~~,CAAC,EAAA;;oBAAnE,IAAI,GAAG,SAA4D;oBAC5D,qBAAM,IAAI,CAAC,IAAI,EAAE,EAAA;;oBAAxB,IAAI,GAAG,SAAiB;oBAC9B,sBAAO,aAAa,CAAC,IAAI,CAAC,EAAC;;;;CAC9B;AAAA,CAAC;AAGF,IAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,IAAI,CAAC;AAEtC,IAAM,GAAG,GAAG,OAAO,EAAE,CAAC;AAEtB,IAAM,MAAM,GAAG,GAAG,CAAC;AAEnB,GAAG,CAAC,GAAG,~~CAAI~~,MAAM,SAAM,EAAE,UAAO,GAAG,EAAE,GAAG;;;;;;gBAEhC,OAAO,CAAC,GAAG,CAAC,aAAa,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBAC3B,qBAAM,WAAW,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,EAAA;;gBAA1C,OAAO,GAAG,SAAgC;gBAChD,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE;oBACf,cAAc,EAAE,2BAA2B;oBAC3C,6BAA6B,EAAE,GAAG;oBAClC,8BAA8B,EAAE,kBAAkB;iBACrD,CAAC,CAAC;gBACH,GAAG,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;;;;gBAEjB,OAAO,CAAC,GAAG,CAAC,SAAS,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBACvC,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,6BAA6B,EAAE,GAAG,EAAE,8BAA8B,EAAE,kBAAkB,EAAE,CAAC,CAAC;gBAC/G,GAAG,CAAC,GAAG,EAAE,CAAC;;;;;KAEjB,CAAC,CAAC;AAEH,GAAG,CAAC,GAAG,CAAC,~~KAAG~~,~~MAAQ~~,EAAE,UAAC,GAAG,EAAE,GAAG;IAC1B,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,2BAA2B,EAAE,CAAC,CAAC;IACpE,GAAG,CAAC,GAAG,CAAC,4BAA4B,CAAC,CAAC;AAC1C,CAAC,CAAC,CAAC;AAEH,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;AAEjB,OAAO,CAAC,GAAG,CAAC,kBAAkB,GAAG,IAAI,CAAC,CAAC"}
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package/lib/examples/proteopedia-wrapper/annotation.js CHANGED Viewed

@@ -36,7 +36,7 @@ export var EvolutionaryConservation = CustomElementProperty.create({
                 switch (_d.label) {
                     case 0:
                         id = model.entryId.toLowerCase();
-                        url = Asset.getUrlAsset(ctx.assetManager, "https://proteopedia.org/cgi-bin/cnsrf?" + id);
+                        url = Asset.getUrlAsset(ctx.assetManager, "https://proteopedia.org/cgi-bin/cnsrf?".concat(id));
                         return [4 /*yield*/, ctx.assetManager.resolve(url, 'json').runInContext(ctx.runtime)];
                     case 1:
                         json = _d.sent();
@@ -55,7 +55,7 @@ export var EvolutionaryConservation = CustomElementProperty.create({
                         chainIndex = model.atomicHierarchy.chainAtomSegments.index;
                         for (rI = 0; rI < residueCount; rI++) {
                             cI = chainIndex[residueOffsets[rI]];
-                            key = model.atomicHierarchy.chains.auth_asym_id.value(cI) + " " + model.atomicHierarchy.residues.auth_seq_id.value(rI);
+                            key = "".concat(model.atomicHierarchy.chains.auth_asym_id.value(cI), " ").concat(model.atomicHierarchy.residues.auth_seq_id.value(rI));
                             if (!conservationMap.has(key))
                                 continue;
                             ann = conservationMap.get(key);
@@ -79,7 +79,7 @@ export var EvolutionaryConservation = CustomElementProperty.create({
     getLabel: function (e) {
         if (e === 10)
             return "Evolutionary Conservation: Insufficient Data";
-        return e ? "Evolutionary Conservation: " + e : void 0;
+        return e ? "Evolutionary Conservation: ".concat(e) : void 0;
     }
 });
 //# sourceMappingURL=annotation.js.map

package/lib/examples/proteopedia-wrapper/annotation.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/examples/proteopedia-wrapper/helpers.js CHANGED Viewed

@@ -19,7 +19,7 @@ export var ModelInfo;
                     case 1:
                         _a.trys.push([1, 3, , 4]);
                         id = model.entryId.toLowerCase();
-                        return [4 /*yield*/, ctx.runTask(ctx.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/" + id }))];
+                        return [4 /*yield*/, ctx.runTask(ctx.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/".concat(id) }))];
                     case 2:
                         src = _a.sent();
                         json = JSON.parse(src);

package/lib/examples/proteopedia-wrapper/helpers.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/examples/proteopedia-wrapper/index.js CHANGED Viewed

@@ -201,7 +201,7 @@ var MolStarProteopediaWrapper = /** @class */ (function () {
                             case 0: return [4 /*yield*/, this.plugin.managers.snapshot.serialize({ type: type, params: params })];
                             case 1:
                                 data = _a.sent();
-                                download(data, "mol-star_state_" + getFormattedTime() + "." + type);
+                                download(data, "mol-star_state_".concat(getFormattedTime(), ".").concat(type));
                                 return [2 /*return*/];
                         }
                     });
@@ -219,7 +219,7 @@ var MolStarProteopediaWrapper = /** @class */ (function () {
                             case 1:
                                 data = _a.sent();
                                 this.loadedParams = __assign({}, this.emptyLoadedParams);
-                                return [4 /*yield*/, this.plugin.managers.snapshot.open(new File([data], "state." + type))];
+                                return [4 /*yield*/, this.plugin.managers.snapshot.open(new File([data], "state.".concat(type)))];
                             case 2: return [2 /*return*/, _a.sent()];
                             case 3:
                                 e_1 = _a.sent();

package/lib/examples/proteopedia-wrapper/index.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/examples/task.js CHANGED Viewed

@@ -30,14 +30,14 @@ function messageTree(root, prefix) {
     var p = root.progress;
     if (!root.children.length) {
         if (p.isIndeterminate)
-            return "" + prefix + p.taskName + ": " + p.message;
-        return "" + prefix + p.taskName + ": [" + p.current + "/" + p.max + "] " + p.message;
+            return "".concat(prefix).concat(p.taskName, ": ").concat(p.message);
+        return "".concat(prefix).concat(p.taskName, ": [").concat(p.current, "/").concat(p.max, "] ").concat(p.message);
     }
     var newPrefix = prefix + '  |_ ';
     var subTree = root.children.map(function (c) { return messageTree(c, newPrefix); });
     if (p.isIndeterminate)
-        return "" + prefix + p.taskName + ": " + p.message + "\n" + subTree.join('\n');
-    return "" + prefix + p.taskName + ": [" + p.current + "/" + p.max + "] " + p.message + "\n" + subTree.join('\n');
+        return "".concat(prefix).concat(p.taskName, ": ").concat(p.message, "\n").concat(subTree.join('\n'));
+    return "".concat(prefix).concat(p.taskName, ": [").concat(p.current, "/").concat(p.max, "] ").concat(p.message, "\n").concat(subTree.join('\n'));
 }
 function createTask(delayMs, r) {
     var _this = this;
@@ -45,12 +45,12 @@ function createTask(delayMs, r) {
         return __generator(this, function (_a) {
             switch (_a.label) {
                 case 0:
-                    ctx.update("Processing delayed " + r + " after " + delayMs + "ms", true);
+                    ctx.update("Processing delayed ".concat(r, " after ").concat(delayMs, "ms"), true);
                     return [4 /*yield*/, Scheduler.delay(delayMs)];
                 case 1:
                     _a.sent();
                     if (!ctx.shouldUpdate) return [3 /*break*/, 3];
-                    return [4 /*yield*/, ctx.update({ message: "hello from delayed " + r + " " + delayMs })];
+                    return [4 /*yield*/, ctx.update({ message: "hello from delayed ".concat(r, " ").concat(delayMs) })];
                 case 2:
                     _a.sent();
                     _a.label = 3;

package/lib/examples/task.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/extensions/alpha-orbitals/transforms.js CHANGED Viewed

@@ -44,7 +44,7 @@ export var StaticBasisAndOrbitals = PluginStateTransform.BuiltIn({
 var CreateOrbitalVolumeParamBase = {
     cutoffThreshold: PD.Numeric(0.0015, { min: 0, max: 0.1, step: 0.0001 }),
     boxExpand: PD.Numeric(4.5, { min: 0, max: 7, step: 0.1 }),
-    gridSpacing: PD.ObjectList({ atomCount: PD.Numeric(0), spacing: PD.Numeric(0.35, { min: 0.1, max: 2, step: 0.01 }) }, function (e) { return "Atoms " + e.atomCount + ": " + e.spacing; }, {
+    gridSpacing: PD.ObjectList({ atomCount: PD.Numeric(0), spacing: PD.Numeric(0.35, { min: 0.1, max: 2, step: 0.01 }) }, function (e) { return "Atoms ".concat(e.atomCount, ": ").concat(e.spacing); }, {
         defaultValue: [
             { atomCount: 55, spacing: 0.5 },
             { atomCount: 40, spacing: 0.45 },
@@ -96,7 +96,7 @@ export var CreateOrbitalVolume = PluginStateTransform.BuiltIn({
         if (!a) {
             return __assign({ index: PD.Numeric(0) }, CreateOrbitalVolumeParamBase);
         }
-        return __assign({ index: PD.Select(0, a.data.orbitals.map(function (o, i) { return [i, "[" + (i + 1) + "] " + o.energy.toFixed(4)]; })) }, CreateOrbitalVolumeParamBase);
+        return __assign({ index: PD.Select(0, a.data.orbitals.map(function (o, i) { return [i, "[".concat(i + 1, "] ").concat(o.energy.toFixed(4))]; })) }, CreateOrbitalVolumeParamBase);
     }
 })({
     apply: function (_a, plugin) {

package/lib/extensions/alpha-orbitals/transforms.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/extensions/anvil/behavior.d.ts CHANGED Viewed

@@ -26,7 +26,7 @@ declare const MembraneOrientation3D: StateTransformer<PluginStateObject.Molecule
     radiusFactor: number;
     sizeFactor: number;
     alpha: number;
-    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
+    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
     sectorOpacity: number;
     doubleSided: boolean;
     flipSided: boolean;
@@ -36,7 +36,7 @@ declare const MembraneOrientation3D: StateTransformer<PluginStateObject.Molecule
 }>>;
 export declare const MembraneOrientationPreset: StructureRepresentationPresetProvider<{
     ignoreHydrogens: boolean | undefined;
-    quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+    quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
     theme: PD.Normalize<{
         globalName: any;
         carbonColor: any;

package/lib/extensions/anvil/representation.d.ts CHANGED Viewed

@@ -19,7 +19,7 @@ declare const BilayerPlanesParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type BilayerPlanesParams = typeof BilayerPlanesParams;
 export declare type BilayerPlanesProps = PD.Values<BilayerPlanesParams>;
@@ -31,7 +31,7 @@ declare const BilayerRimsParams: {
     radiusFactor: PD.Numeric;
     sizeFactor: PD.Numeric;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type BilayerRimsParams = typeof BilayerRimsParams;
 export declare type BilayerRimsProps = PD.Values<BilayerRimsParams>;
@@ -44,7 +44,7 @@ export declare const MembraneOrientationParams: {
     radiusFactor: PD.Numeric;
     sizeFactor: PD.Numeric;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     sectorOpacity: PD.Numeric;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -63,7 +63,7 @@ export declare function getMembraneOrientationParams(ctx: ThemeRegistryContext,
     radiusFactor: PD.Numeric;
     sizeFactor: PD.Numeric;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     sectorOpacity: PD.Numeric;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -82,7 +82,7 @@ export declare const MembraneOrientationRepresentationProvider: StructureReprese
     radiusFactor: PD.Numeric;
     sizeFactor: PD.Numeric;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     sectorOpacity: PD.Numeric;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;

package/lib/extensions/anvil/representation.js CHANGED Viewed

@@ -55,7 +55,7 @@ export var MembraneOrientationRepresentationProvider = StructureRepresentationPr
     }
 });
 function membraneLabel(data) {
-    return lociLabel(Structure.Loci(data)) + " | Membrane Orientation";
+    return "".concat(lociLabel(Structure.Loci(data)), " | Membrane Orientation");
 }
 function getBilayerRims(ctx, data, props, shape) {
     var _a = MembraneOrientationProvider.get(data).value, p1 = _a.planePoint1, p2 = _a.planePoint2, centroid = _a.centroid, radius = _a.radius;

package/lib/extensions/anvil/representation.js.map CHANGED Viewed

	@@ -1 +1 @@
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