npm - molstar - Versions diffs - 2.3.7 → 2.4.1 - Mend

molstar 2.3.7 → 2.4.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1699) hide show

package/lib/commonjs/mol-plugin-state/actions/volume.js CHANGED Viewed

@@ -74,41 +74,41 @@ var DownloadDensity = mol_state_1.StateAction.build({
                         case 'pdb-xray':
                             downloadParams = src.params.provider.server === 'pdbe' ? {
                                 url: assets_1.Asset.Url(src.params.type === '2fofc'
-                                    ? "http://www.ebi.ac.uk/pdbe/coordinates/files/" + src.params.provider.id.toLowerCase() + ".ccp4"
-                                    : "http://www.ebi.ac.uk/pdbe/coordinates/files/" + src.params.provider.id.toLowerCase() + "_diff.ccp4"),
+                                    ? "http://www.ebi.ac.uk/pdbe/coordinates/files/".concat(src.params.provider.id.toLowerCase(), ".ccp4")
+                                    : "http://www.ebi.ac.uk/pdbe/coordinates/files/".concat(src.params.provider.id.toLowerCase(), "_diff.ccp4")),
                                 isBinary: true,
-                                label: "PDBe X-ray map: " + src.params.provider.id
+                                label: "PDBe X-ray map: ".concat(src.params.provider.id)
                             } : {
                                 url: assets_1.Asset.Url(src.params.type === '2fofc'
-                                    ? "https://edmaps.rcsb.org/maps/" + src.params.provider.id.toLowerCase() + "_2fofc.dsn6"
-                                    : "https://edmaps.rcsb.org/maps/" + src.params.provider.id.toLowerCase() + "_fofc.dsn6"),
+                                    ? "https://edmaps.rcsb.org/maps/".concat(src.params.provider.id.toLowerCase(), "_2fofc.dsn6")
+                                    : "https://edmaps.rcsb.org/maps/".concat(src.params.provider.id.toLowerCase(), "_fofc.dsn6")),
                                 isBinary: true,
-                                label: "RCSB X-ray map: " + src.params.provider.id
+                                label: "RCSB X-ray map: ".concat(src.params.provider.id)
                             };
                             break;
                         case 'pdb-emd-ds':
                             downloadParams = src.params.provider.server === 'pdbe' ? {
-                                url: assets_1.Asset.Url("https://www.ebi.ac.uk/pdbe/densities/emd/" + src.params.provider.id.toLowerCase() + "/cell?detail=" + src.params.detail),
+                                url: assets_1.Asset.Url("https://www.ebi.ac.uk/pdbe/densities/emd/".concat(src.params.provider.id.toLowerCase(), "/cell?detail=").concat(src.params.detail)),
                                 isBinary: true,
-                                label: "PDBe EMD Density Server: " + src.params.provider.id
+                                label: "PDBe EMD Density Server: ".concat(src.params.provider.id)
                             } : {
-                                url: assets_1.Asset.Url("https://maps.rcsb.org/em/" + src.params.provider.id.toLowerCase() + "/cell?detail=" + src.params.detail),
+                                url: assets_1.Asset.Url("https://maps.rcsb.org/em/".concat(src.params.provider.id.toLowerCase(), "/cell?detail=").concat(src.params.detail)),
                                 isBinary: true,
-                                label: "RCSB PDB EMD Density Server: " + src.params.provider.id
+                                label: "RCSB PDB EMD Density Server: ".concat(src.params.provider.id)
                             };
                             break;
                         case 'pdb-xray-ds':
                             downloadParams = src.params.provider.server === 'pdbe' ? {
-                                url: assets_1.Asset.Url("https://www.ebi.ac.uk/pdbe/densities/x-ray/" + src.params.provider.id.toLowerCase() + "/cell?detail=" + src.params.detail),
+                                url: assets_1.Asset.Url("https://www.ebi.ac.uk/pdbe/densities/x-ray/".concat(src.params.provider.id.toLowerCase(), "/cell?detail=").concat(src.params.detail)),
                                 isBinary: true,
-                                label: "PDBe X-ray Density Server: " + src.params.provider.id
+                                label: "PDBe X-ray Density Server: ".concat(src.params.provider.id)
                             } : {
-                                url: assets_1.Asset.Url("https://maps.rcsb.org/x-ray/" + src.params.provider.id.toLowerCase() + "/cell?detail=" + src.params.detail),
+                                url: assets_1.Asset.Url("https://maps.rcsb.org/x-ray/".concat(src.params.provider.id.toLowerCase(), "/cell?detail=").concat(src.params.detail)),
                                 isBinary: true,
-                                label: "RCSB PDB X-ray Density Server: " + src.params.provider.id
+                                label: "RCSB PDB X-ray Density Server: ".concat(src.params.provider.id)
                             };
                             break;
-                        default: throw new Error(src.name + " not supported.");
+                        default: throw new Error("".concat(src.name, " not supported."));
                     }
                     return [4 /*yield*/, plugin.builders.data.download(downloadParams)];
                 case 1:
@@ -130,7 +130,7 @@ var DownloadDensity = mol_state_1.StateAction.build({
                             entryId = src.params.provider.id;
                             provider = plugin.dataFormats.get('dscif');
                             break;
-                        default: throw new Error(src.name + " not supported.");
+                        default: throw new Error("".concat(src.name, " not supported."));
                     }
                     if (!provider) {
                         plugin.log.warn('DownloadDensity: Format provider not found.');

package/lib/commonjs/mol-plugin-state/actions/volume.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ {"version":3,"file":"volume.js","sourceRoot":"","sources":["../../../../src/mol-plugin-state/actions/volume.ts"],"names":[],"mappings":";AAAA;;;;;GAKG;;;;AAGH,6CAAgF;AAChF,2CAAsC;AACtC,sDAAuD;AACvD,oEAAwE;AACxE,sCAA+C;AAG/C,gDAA8C;AAC9C,4CAAgD;AAMhD,IAAM,eAAe,GAAG,uBAAW,CAAC,KAAK,CAAC;IACtC,IAAI,EAAE,2BAAiB,CAAC,IAAI;IAC5B,OAAO,EAAE,EAAE,IAAI,EAAE,kBAAkB,EAAE,WAAW,EAAE,wEAAwE,EAAE;IAC5H,MAAM,EAAE,UAAC,CAAC,EAAE,GAAkB;QAClB,IAAA,OAAO,GAAK,GAAG,CAAC,WAAW,QAApB,CAAqB;QACpC,OAAO;YACH,MAAM,EAAE,kCAAE,CAAC,YAAY,CAAC,UAAU,EAAE;gBAChC,UAAU,EAAE,kCAAE,CAAC,KAAK,CAAC;oBACjB,QAAQ,EAAE,kCAAE,CAAC,KAAK,CAAC;wBACf,EAAE,EAAE,kCAAE,CAAC,IAAI,CAAC,MAAM,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;wBACpC,MAAM,EAAE,kCAAE,CAAC,MAAM,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,CAAC,EAAE,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,CAAC;qBACtE,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;oBACnB,IAAI,EAAE,kCAAE,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC,CAAC,OAAO,EAAE,QAAQ,CAAC,EAAE,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC,CAAC;iBACrE,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,CAAC;gBACpB,aAAa,EAAE,kCAAE,CAAC,KAAK,CAAC;oBACpB,QAAQ,EAAE,kCAAE,CAAC,KAAK,CAAC;wBACf,EAAE,EAAE,kCAAE,CAAC,IAAI,CAAC,MAAM,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;wBACpC,MAAM,EAAE,kCAAE,CAAC,MAAM,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,CAAC,EAAE,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,CAAC;qBACtE,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;oBACnB,MAAM,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,IAAI,EAAE,CAAC,EAAE,EAAE,EAAE,KAAK,EAAE,QAAQ,EAAE,CAAC;iBAC1E,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,CAAC;gBACpB,YAAY,EAAE,kCAAE,CAAC,KAAK,CAAC;oBACnB,QAAQ,EAAE,kCAAE,CAAC,KAAK,CAAC;wBACf,EAAE,EAAE,kCAAE,CAAC,IAAI,CAAC,UAAU,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;wBACxC,MAAM,EAAE,kCAAE,CAAC,MAAM,CAAuB,MAAM,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,CAAC,EAAE,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,CAAC;qBAC5F,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;oBACnB,MAAM,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,IAAI,EAAE,CAAC,EAAE,EAAE,EAAE,KAAK,EAAE,QAAQ,EAAE,CAAC;iBAC1E,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,CAAC;gBACpB,KAAK,EAAE,kCAAE,CAAC,KAAK,CAAC;oBACZ,GAAG,EAAE,kCAAE,CAAC,GAAG,CAAC,EAAE,CAAC;oBACf,QAAQ,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,CAAC;oBAC3B,MAAM,EAAE,kCAAE,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC;iBACrC,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,CAAC;aACvB,EAAE;gBACC,OAAO,EAAE;oBACL,CAAC,UAAU,EAAE,gBAAgB,CAAC;oBAC9B,CAAC,YAAY,EAAE,wBAAwB,CAAC;oBACxC,CAAC,aAAa,EAAE,0BAA0B,CAAC;oBAC3C,CAAC,KAAK,EAAE,KAAK,CAAC;iBACjB;aACJ,CAAC;SACL,CAAC;IACN,CAAC;CACJ,CAAC,CAAC,UAAC,EAAU,EAAE,MAAqB;QAA/B,MAAM,YAAA;IAA8B,OAAA,eAAI,CAAC,MAAM,CAAC,kBAAkB,EAAE,UAAM,OAAO;;;;;;oBAC7E,GAAG,GAAG,MAAM,CAAC,MAAM,CAAC;oBAI1B,QAAQ,GAAG,CAAC,IAAI,EAAE;wBACd,KAAK,KAAK;4BACN,cAAc,GAAG,GAAG,CAAC,MAAM,CAAC;4BAC5B,MAAM;wBACV,KAAK,UAAU;4BACX,cAAc,GAAG,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,MAAM,KAAK,MAAM,CAAC,CAAC,CAAC;gCACrD,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,KAAK,OAAO;oCACtC,CAAC,CAAC,sDAA+C,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,UAAO;oCAC5F,CAAC,CAAC,sDAA+C,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,eAAY,CAAC;gCACtG,QAAQ,EAAE,IAAI;gCACd,KAAK,EAAE,0BAAmB,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAE;6BACrD,CAAC,CAAC,CAAC;gCACA,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,KAAK,OAAO;oCACtC,CAAC,CAAC,uCAAgC,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,gBAAa;oCACnF,CAAC,CAAC,uCAAgC,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,eAAY,CAAC;gCACvF,QAAQ,EAAE,IAAI;gCACd,KAAK,EAAE,0BAAmB,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAE;6BACrD,CAAC;4BACF,MAAM;wBACV,KAAK,YAAY;4BACb,cAAc,GAAG,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,MAAM,KAAK,MAAM,CAAC,CAAC,CAAC;gCACrD,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,mDAA4C,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,0BAAgB,GAAG,CAAC,MAAM,CAAC,MAAM,CAAE,CAAC;gCACnI,QAAQ,EAAE,IAAI;gCACd,KAAK,EAAE,mCAA4B,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAE;6BAC9D,CAAC,CAAC,CAAC;gCACA,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,mCAA4B,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,0BAAgB,GAAG,CAAC,MAAM,CAAC,MAAM,CAAE,CAAC;gCACnH,QAAQ,EAAE,IAAI;gCACd,KAAK,EAAE,uCAAgC,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAE;6BAClE,CAAC;4BACF,MAAM;wBACV,KAAK,aAAa;4BACd,cAAc,GAAG,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,MAAM,KAAK,MAAM,CAAC,CAAC,CAAC;gCACrD,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,qDAA8C,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,0BAAgB,GAAG,CAAC,MAAM,CAAC,MAAM,CAAE,CAAC;gCACrI,QAAQ,EAAE,IAAI;gCACd,KAAK,EAAE,qCAA8B,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAE;6BAChE,CAAC,CAAC,CAAC;gCACA,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,sCAA+B,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,WAAW,EAAE,0BAAgB,GAAG,CAAC,MAAM,CAAC,MAAM,CAAE,CAAC;gCACtH,QAAQ,EAAE,IAAI;gCACd,KAAK,EAAE,yCAAkC,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAE;6BACpE,CAAC;4BACF,MAAM;wBACV,OAAO,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,UAAI,GAAW,CAAC,IAAI,oBAAiB,CAAC,CAAC;qBACnE;oBAEY,qBAAM,MAAM,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,CAAC,cAAc,CAAC,EAAA;;oBAA1D,IAAI,GAAG,SAAmD;oBAC5D,OAAO,GAAuB,SAAS,CAAC;oBAE5C,QAAQ,GAAG,CAAC,IAAI,EAAE;wBACd,KAAK,KAAK;4BACN,cAAc,GAAG,GAAG,CAAC,MAAM,CAAC;4BAC5B,QAAQ,GAAG,GAAG,CAAC,MAAM,CAAC,MAAM,KAAK,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,WAAW,CAAC,IAAI,CAAC,IAAA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package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts CHANGED Viewed

@@ -8,16 +8,16 @@ import { PluginStateAnimation } from '../model';
 export declare const AnimateModelIndex: PluginStateAnimation<{
     mode: PD.NamedParams<PD.Normalize<{
         direction: any;
-    }>, "once"> | PD.NamedParams<PD.Normalize<{
+    }>, "loop"> | PD.NamedParams<PD.Normalize<unknown>, "palindrome"> | PD.NamedParams<PD.Normalize<{
         direction: any;
-    }>, "loop"> | PD.NamedParams<PD.Normalize<unknown>, "palindrome">;
+    }>, "once">;
     duration: PD.NamedParams<PD.Normalize<{
-        targetFps: any;
-    }>, "computed"> | PD.NamedParams<PD.Normalize<{
         durationInS: any;
     }>, "fixed"> | PD.NamedParams<PD.Normalize<{
         maxFps: any;
-    }>, "sequential">;
+    }>, "sequential"> | PD.NamedParams<PD.Normalize<{
+        targetFps: any;
+    }>, "computed">;
 }, {
     palindromeDirections?: {
         [id: string]: 1 | -1 | undefined;

package/lib/commonjs/mol-plugin-state/animation/helpers.d.ts CHANGED Viewed

@@ -13,13 +13,13 @@ export declare function unwindStructureAssembly(structure: Structure, unitTransf
 export declare function explodeStructure(structure: Structure, unitTransforms: StructureUnitTransforms, t: number, sphere: Sphere3D): void;
 export declare const SpinStructureParams: {
     axis: PD.Mapped<PD.NamedParams<PD.Normalize<{
-        vector: Vec3;
-    }>, "custom"> | PD.NamedParams<PD.Normalize<{
         principalAxis: "dirA" | "dirB" | "dirC";
-    }>, "structure">>;
-    origin: PD.Mapped<PD.NamedParams<PD.Normalize<{
+    }>, "structure"> | PD.NamedParams<PD.Normalize<{
+        vector: Vec3;
+    }>, "custom">>;
+    origin: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "structure"> | PD.NamedParams<PD.Normalize<{
         vector: Vec3;
-    }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "structure">>;
+    }>, "custom">>;
 };
 export declare type SpinStructureProps = PD.Values<typeof SpinStructureParams>;
 export declare function getSpinStructureAxisAndOrigin(structure: Structure, props: SpinStructureProps): {

package/lib/commonjs/mol-plugin-state/builder/data.d.ts CHANGED Viewed

@@ -9,11 +9,11 @@ import { Download, ReadFile, DownloadBlob, RawData } from '../transforms/data';
 export declare class DataBuilder {
     plugin: PluginContext;
     private get dataState();
-    rawData(params: StateTransformer.Params<RawData>, options?: Partial<StateTransform.Options>): Promise<import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.Binary | import("../objects").PluginStateObject.Data.String, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>>;
-    download(params: StateTransformer.Params<Download>, options?: Partial<StateTransform.Options>): Promise<import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.Binary | import("../objects").PluginStateObject.Data.String, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>>;
+    rawData(params: StateTransformer.Params<RawData>, options?: Partial<StateTransform.Options>): Promise<import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.String | import("../objects").PluginStateObject.Data.Binary, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>>;
+    download(params: StateTransformer.Params<Download>, options?: Partial<StateTransform.Options>): Promise<import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.String | import("../objects").PluginStateObject.Data.Binary, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>>;
     downloadBlob(params: StateTransformer.Params<DownloadBlob>, options?: Partial<StateTransform.Options>): Promise<import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.Blob, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>>;
     readFile(params: StateTransformer.Params<ReadFile>, options?: Partial<StateTransform.Options>): Promise<{
-        data: import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.Binary | import("../objects").PluginStateObject.Data.String, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>;
+        data: import("../../mol-state").StateObjectSelector<import("../objects").PluginStateObject.Data.String | import("../objects").PluginStateObject.Data.Binary, StateTransformer<import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, import("../../mol-state/object").StateObject<any, import("../../mol-state/object").StateObject.Type<any>>, any>>;
         fileInfo: import("../../mol-util/file-info").FileInfo;
     }>;
     constructor(plugin: PluginContext);

package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts CHANGED Viewed

@@ -48,14 +48,14 @@ export declare const PresetTrajectoryHierarchy: {
         showUnitcell: boolean | undefined;
         structure: PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-            ijkMin: any;
-            ijkMax: any;
-        }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
+        }>, "auto"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
             id: any;
         }>, "assembly"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-        }>, "auto"> | PD.NamedParams<PD.Normalize<{
+            ijkMin: any;
+            ijkMax: any;
+        }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
         }>, "model"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
@@ -75,7 +75,7 @@ export declare const PresetTrajectoryHierarchy: {
         unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>> | undefined;
         structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
         structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
-        representation: {
+        representation: {} | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -133,7 +133,7 @@ export declare const PresetTrajectoryHierarchy: {
             representations: {
                 all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
             };
-        } | {} | {
+        } | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -169,7 +169,7 @@ export declare const PresetTrajectoryHierarchy: {
         unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>> | undefined;
         structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
         structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
-        representation: {
+        representation: {} | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -227,7 +227,7 @@ export declare const PresetTrajectoryHierarchy: {
             representations: {
                 all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
             };
-        } | {} | {
+        } | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -266,7 +266,7 @@ export declare const PresetTrajectoryHierarchy: {
         unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>> | undefined;
         structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
         structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
-        representation: {
+        representation: {} | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -324,7 +324,7 @@ export declare const PresetTrajectoryHierarchy: {
             representations: {
                 all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
             };
-        } | {} | {
+        } | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -357,7 +357,7 @@ export declare const PresetTrajectoryHierarchy: {
         unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>> | undefined;
         structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
         structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
-        representation: {
+        representation: {} | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -415,7 +415,7 @@ export declare const PresetTrajectoryHierarchy: {
             representations: {
                 all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
             };
-        } | {} | {
+        } | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -448,7 +448,7 @@ export declare const PresetTrajectoryHierarchy: {
         unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>> | undefined;
         structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
         structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
-        representation: {
+        representation: {} | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -506,7 +506,7 @@ export declare const PresetTrajectoryHierarchy: {
             representations: {
                 all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
             };
-        } | {} | {
+        } | {
             components?: undefined;
             representations?: undefined;
         } | {

package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts CHANGED Viewed

@@ -30,14 +30,14 @@ export declare class TrajectoryHierarchyBuilder {
         showUnitcell: boolean | undefined;
         structure: PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-            ijkMin: any;
-            ijkMax: any;
-        }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
+        }>, "auto"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
             id: any;
         }>, "assembly"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
-        }>, "auto"> | PD.NamedParams<PD.Normalize<{
+            ijkMin: any;
+            ijkMax: any;
+        }>, "symmetry"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
         }>, "model"> | PD.NamedParams<PD.Normalize<{
             dynamicBonds: any;
@@ -57,7 +57,7 @@ export declare class TrajectoryHierarchyBuilder {
         unitcell: import("../../../mol-state").StateObjectSelector<PluginStateObject.Shape.Representation3D, import("../../../mol-state/transformer").StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>> | undefined;
         structure: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, import("../../../mol-state/transformer").StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
         structureProperties: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure, import("../../../mol-state/transformer").StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
-        representation: {
+        representation: {} | {
             components?: undefined;
             representations?: undefined;
         } | {
@@ -115,7 +115,7 @@ export declare class TrajectoryHierarchyBuilder {
             representations: {
                 all: import("../../../mol-state").StateObjectSelector<PluginStateObject.Molecule.Structure.Representation3D, import("../../../mol-state/transformer").StateTransformer<import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, import("../../../mol-state/object").StateObject<any, import("../../../mol-state/object").StateObject.Type<any>>, any>>;
             };
-        } | {} | {
+        } | {
             components?: undefined;
             representations?: undefined;
         } | {

package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.js CHANGED Viewed

@@ -81,7 +81,7 @@ var TrajectoryHierarchyBuilder = /** @class */ (function () {
     };
     TrajectoryHierarchyBuilder.prototype.registerPreset = function (provider) {
         if (this.providerMap.has(provider.id)) {
-            throw new Error("Hierarchy provider with id '" + provider.id + "' already registered.");
+            throw new Error("Hierarchy provider with id '".concat(provider.id, "' already registered."));
         }
         this._providers.push(provider);
         this.providerMap.set(provider.id, provider);
@@ -105,7 +105,7 @@ var TrajectoryHierarchyBuilder = /** @class */ (function () {
         var prms = params || (provider.params
             ? param_definition_1.ParamDefinition.getDefaultValues(provider.params(cell.obj, this.plugin))
             : {});
-        var task = mol_task_1.Task.create("" + provider.display.name, function () { return provider.apply(cell, prms, _this.plugin); });
+        var task = mol_task_1.Task.create("".concat(provider.display.name), function () { return provider.apply(cell, prms, _this.plugin); });
         return this.plugin.runTask(task);
     };
     return TrajectoryHierarchyBuilder;

package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"hierarchy.js","sourceRoot":"","sources":["../../../../../src/mol-plugin-state/builder/structure/hierarchy.ts"],"names":[],"mappings":";AAAA;;;;;GAKG;;;AAEH,+CAAmD;AAEnD,gDAAoD;AACpD,8CAAyC;AACzC,iDAA2D;AAC3D,mDAAyD;AACzD,uEAA2E;AAE3E,uDAAkG;AAClG,iDAA6D;AAM7D;IAuFI,oCAAmB,MAAqB;QAAxC,iBAEC;QAFkB,WAAM,GAAN,MAAM,CAAe;QAtFhC,eAAU,GAAwC,EAAE,CAAC;QACrD,gBAAW,GAAmD,IAAI,GAAG,EAAE,CAAC;QAEvE,oBAAe,GAAG,4CAAyB,CAAC,OAAO,CAAC;QAoFzD,IAAA,sBAAa,EAAC,4CAAyB,EAAE,UAAA,CAAC,IAAI,OAAA,KAAI,CAAC,cAAc,CAAC,CAAC,CAAC,EAAtB,CAAsB,CAAC,CAAC;IAC1E,CAAC;IAnFO,oDAAe,GAAvB,UAAwB,GAAyC;;QAC7D,OAAO,OAAO,GAAG,KAAK,QAAQ;YAC1B,CAAC,CAAC,MAAA,4CAAyB,CAAC,GAAsC,CAAC,mCAAI,IAAA,gBAAS,EAAC,IAAI,CAAC,UAAU,EAAE,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,EAAE,KAAK,GAAG,EAAZ,CAAY,CAAC;YACpH,CAAC,CAAC,GAAG,CAAC;IACd,CAAC;IAED,8CAAS,GAAT,UAAU,CAAwC;QAC9C,KAAgB,UAAe,EAAf,KAAA,IAAI,CAAC,UAAU,EAAf,cAAe,EAAf,IAAe,EAAE;YAA5B,IAAM,CAAC,SAAA;YACR,IAAI,CAAC,CAAC,CAAC,YAAY,IAAI,CAAC,CAAC,YAAY,CAAC,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC;gBAAE,OAAO,IAAI,CAAC;SACtE;QACD,OAAO,KAAK,CAAC;IACjB,CAAC;IAED,sBAAI,iDAAS;aAAb,cAAoE,OAAO,IAAI,CAAC,UAAU,CAAC,CAAC,CAAC;;;OAAA;IAE7F,+CAAU,GAAV,UAAW,CAAyC;QAChD,IAAI,CAAC,CAAC;YAAE,OAAO,IAAI,CAAC,SAAS,CAAC;QAC9B,IAAM,GAAG,GAAG,EAAE,CAAC;QACf,KAAgB,UAAe,EAAf,KAAA,IAAI,CAAC,UAAU,EAAf,cAAe,EAAf,IAAe,EAAE;YAA5B,IAAM,CAAC,SAAA;YACR,IAAI,CAAC,CAAC,YAAY,IAAI,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC;gBAAE,SAAS;YAChE,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;SACf;QACD,OAAO,GAAG,CAAC;IACf,CAAC;IAED,oDAAe,GAAf,UAAgB,CAAyC;QACrD,IAAM,OAAO,GAAuB,EAAE,CAAC;QACvC,KAAgB,UAAe,EAAf,KAAA,IAAI,CAAC,UAAU,EAAf,cAAe,EAAf,IAAe,EAAE;YAA5B,IAAM,CAAC,SAAA;YACR,IAAI,CAAC,IAAI,CAAC,CAAC,YAAY,IAAI,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC;gBAAE,SAAS;YACrE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC;SACxC;QACD,OAAO,kCAAE,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACtC,CAAC;IAED,0DAAqB,GAArB,UAAsB,CAAwC;QAC1D,IAAM,OAAO,GAAuB,EAAE,CAAC;QACvC,IAAM,GAAG,GAA8B,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;QAC3D,KAAgB,UAAe,EAAf,KAAA,IAAI,CAAC,UAAU,EAAf,cAAe,EAAf,IAAe,EAAE;YAA5B,IAAM,CAAC,SAAA;YACR,IAAI,CAAC,CAAC,YAAY,IAAI,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC;gBAAE,SAAS;YAEhE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC;YACrC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,kCAAE,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,kCAAE,CAAC,UAAU,EAAE,CAAC;SAC/E;QACD,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO,kCAAE,CAAC,YAAY,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,kCAAE,CAAC,UAAU,EAAE,EAAE,CAAC,CAAC;QAC9E,OAAO,kCAAE,CAAC,YAAY,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,GAAG,EAAE,EAAE,OAAO,SAAA,EAAE,CAAC,CAAC;IAC5D,CAAC;IAED,mDAAc,GAAd,UAAe,QAA2C;QACtD,IAAI,IAAI,CAAC,WAAW,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,CAAC,EAAE;YACnC,MAAM,IAAI,KAAK,CAAC,sCAA+B,QAAQ,CAAC,EAAE,0BAAuB,CAAC,CAAC;SACtF;QACD,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;QAC/B,IAAI,CAAC,WAAW,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,EAAE,QAAQ,CAAC,CAAC;IAChD,CAAC;IAED,qDAAgB,GAAhB,UAAiB,QAA2C;QACxD,IAAI,CAAC,WAAW,CAAC,MAAM,CAAC,QAAQ,CAAC,EAAE,CAAC,CAAC;QACrC,IAAA,0BAAkB,EAAC,IAAI,CAAC,UAAU,EAAE,QAAQ,CAAC,CAAC;IAClD,CAAC;IAID,gDAAW,GAAX,UAAY,MAAsB,EAAE,WAAuD,EAAE,MAAY;QAAzG,iBAiBC;QAhBG,IAAM,QAAQ,GAAG,IAAI,CAAC,eAAe,CAAC,WAAW,CAAC,CAAC;QACnD,IAAI,CAAC,QAAQ;YAAE,OAAO;QAEtB,IAAM,KAAK,GAAG,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC;QACrC,IAAM,IAAI,GAAG,0BAAc,CAAC,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC;QAC3D,IAAI,CAAC,IAAI,EAAE;YACP,IAAI,CAAC,wBAAgB;gBAAE,OAAO,CAAC,IAAI,CAAC,iDAAiD,CAAC,CAAC;YACvF,OAAO;SACV;QAED,IAAM,IAAI,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,MAAM;YACnC,CAAC,CAAC,kCAAE,CAAC,gBAAgB,CAAC,QAAQ,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,EAAE,IAAI,CAAC,MAAM,CAAc,CAAC;YAC1E,CAAC,CAAC,EAAE,CAAC,CAAC;QAEV,IAAM,IAAI,GAAG,eAAI,CAAC,MAAM,CAAC,UAAG,QAAQ,CAAC,OAAO,CAAC,IAAI,CAAE,EAAE,cAAM,OAAA,QAAQ,CAAC,KAAK,CAAC,IAAI,EAAE,IAAI,EAAE,KAAI,CAAC,MAAM,CAAiB,EAAvD,CAAuD,CAAC,CAAC;QACpH,OAAO,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;IACrC,CAAC;IAKL,iCAAC;AAAD,CAAC,AA1FD,IA0FC;AA1FY,gEAA0B"}

package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts CHANGED Viewed

@@ -29,11 +29,11 @@ export declare namespace StructureRepresentationPresetProvider {
     };
     const CommonParams: {
         ignoreHydrogens: PD.Base<boolean | undefined>;
-        quality: PD.Base<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined>;
+        quality: PD.Base<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined>;
         theme: PD.Base<PD.Normalize<{
-            globalName: "occupancy" | "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
-            carbonColor: "chain-id" | "operator-name" | "element-symbol" | undefined;
-            symmetryColor: "occupancy" | "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
+            globalName: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
+            carbonColor: "element-symbol" | "chain-id" | "operator-name" | undefined;
+            symmetryColor: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
             focus: PD.Normalize<{
                 name: any;
                 params: any;
@@ -44,14 +44,14 @@ export declare namespace StructureRepresentationPresetProvider {
     function reprBuilder(plugin: PluginContext, params: CommonParams, structure?: Structure): {
         update: import("../../../mol-state/state/builder").StateBuilder.Root;
         builder: import("./representation").StructureRepresentationBuilder;
-        color: "occupancy" | "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
-        symmetryColor: "occupancy" | "uniform" | "atom-id" | "carbohydrate-symbol" | "chain-id" | "element-index" | "operator-name" | "element-symbol" | "entity-id" | "entity-source" | "hydrophobicity" | "illustrative" | "model-index" | "molecule-type" | "operator-hkl" | "partial-charge" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "uncertainty" | "unit-index" | undefined;
+        color: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
+        symmetryColor: "uniform" | "occupancy" | "element-index" | "element-symbol" | "carbohydrate-symbol" | "chain-id" | "operator-name" | "molecule-type" | "polymer-id" | "polymer-index" | "residue-name" | "secondary-structure" | "sequence-id" | "shape-group" | "unit-index" | "uncertainty" | "entity-source" | "illustrative" | "hydrophobicity" | "model-index" | "operator-hkl" | "partial-charge" | "atom-id" | "entity-id" | undefined;
         typeParams: {
-            quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
+            quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest";
             ignoreHydrogens: boolean;
         };
         ballAndStickColor: Partial<PD.Values<{
-            carbonColor: PD.Mapped<PD.NamedParams<PD.Normalize<{
+            carbonColor: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "element-symbol"> | PD.NamedParams<PD.Normalize<{
                 palette: PD.NamedParams<PD.Normalize<{
                     maxCount: any;
                     hue: any;
@@ -74,7 +74,7 @@ export declare namespace StructureRepresentationPresetProvider {
                 }>, "generate"> | PD.NamedParams<PD.Normalize<{
                     list: any;
                 }>, "colors">;
-            }>, "operator-name"> | PD.NamedParams<PD.Normalize<unknown>, "element-symbol">>;
+            }>, "operator-name">>;
             saturation: PD.Numeric;
             lightness: PD.Numeric;
         }>>;
@@ -94,7 +94,7 @@ export declare const PresetStructureRepresentations: {
     empty: StructureRepresentationPresetProvider<unknown, {}>;
     auto: StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -123,7 +123,7 @@ export declare const PresetStructureRepresentations: {
     'atomic-detail': StructureRepresentationPresetProvider<{
         showCarbohydrateSymbol: boolean;
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -144,7 +144,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'polymer-cartoon': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -164,7 +164,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'polymer-and-ligand': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -199,7 +199,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'protein-and-nucleic': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;
@@ -221,7 +221,7 @@ export declare const PresetStructureRepresentations: {
     }>;
     'coarse-surface': StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;

package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js CHANGED Viewed

@@ -442,7 +442,7 @@ function presetStaticComponent(plugin, structure, type, params) {
 }
 exports.presetStaticComponent = presetStaticComponent;
 function presetSelectionComponent(plugin, structure, query, params) {
-    return plugin.builders.structure.tryCreateComponentFromSelection(structure, structure_selection_query_1.StructureSelectionQueries[query], "selection-" + query, params);
+    return plugin.builders.structure.tryCreateComponentFromSelection(structure, structure_selection_query_1.StructureSelectionQueries[query], "selection-".concat(query), params);
 }
 exports.presetSelectionComponent = presetSelectionComponent;
 exports.PresetStructureRepresentations = {

package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/commonjs/mol-plugin-state/builder/structure/representation.d.ts CHANGED Viewed

@@ -17,7 +17,7 @@ export declare class StructureRepresentationBuilder {
     private get dataState();
     readonly defaultProvider: StructureRepresentationPresetProvider<{
         ignoreHydrogens: boolean | undefined;
-        quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest" | undefined;
+        quality: "auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest" | undefined;
         theme: PD.Normalize<{
             globalName: any;
             carbonColor: any;