molstar 2.3.7 → 2.4.1

package/lib/commonjs/mol-repr/shape/loci/plane.js

@@ -28,7 +28,7 @@ exports.PlaneParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, _PlanePara
 //
 function getPlaneName(locis) {
     var label = (0, label_1.structureElementLociLabelMany)(locis, { countsOnly: true });
-    return "Best Fit Plane of " + label;
+    return "Best Fit Plane of ".concat(label);
 }
 var tmpMat = (0, linear_algebra_1.Mat4)();
 var tmpV = (0, linear_algebra_1.Vec3)();

package/lib/commonjs/mol-repr/shape/loci/plane.js.map

@@ -1 +1 @@
-{"version":3,"file":"plane.js","sourceRoot":"","sources":["../../../../../src/mol-repr/shape/loci/plane.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAGH,uEAA2E;AAC3E,uDAA2D;AAC3D,oDAAwD;AACxD,uDAAyG;AACzG,kDAAiD;AACjD,4DAA2D;AAC3D,4EAA0E;AAC1E,kDAAyE;AACzE,mEAA8D;AAC9D,iEAAgE;AAChE,0DAAyD;AACzD,0DAAgE;AAChE,uDAAoD;AAMpD,IAAM,YAAY,mDACX,WAAI,CAAC,MAAM,KACd,KAAK,EAAE,kCAAE,CAAC,KAAK,CAAC,kBAAU,CAAC,MAAM,CAAC,EAClC,WAAW,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,GAC/D,CAAC;AAGF,IAAM,YAAY,GAAG;IACjB,OAAO,EAAE,UAAC,GAA0B,EAAE,SAA8D,IAAK,OAAA,IAAA,oCAAmB,EAAC,aAAa,EAAE,WAAI,CAAC,KAAK,CAAC,EAA9C,CAA8C;CAC1J,CAAC;AAEW,QAAA,WAAW,mDACjB,YAAY,KACf,OAAO,EAAE,kCAAE,CAAC,WAAW,CAAC,CAAC,OAAO,CAAC,EAAE,kCAAE,CAAC,eAAe,CAAC,YAAY,CAAC,CAAC,IACtE;AAIF,EAAE;AAEF,SAAS,YAAY,CAAC,KAA8B;IAChD,IAAM,KAAK,GAAG,IAAA,qCAA6B,EAAC,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC,CAAC;IACzE,OAAO,uBAAqB,KAAO,CAAC;AACxC,CAAC;AAED,IAAM,MAAM,GAAG,IAAA,qBAAI,GAAE,CAAC;AACtB,IAAM,IAAI,GAAG,IAAA,qBAAI,GAAE,CAAC;AACpB,SAAS,cAAc,CAAC,IAAe,EAAE,KAAiB,EAAE,IAAW;IACnE,IAAM,KAAK,GAAG,0BAAW,CAAC,WAAW,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC;IACtD,IAAM,aAAa,GAAG,4BAAgB,CAAC,IAAI,CAAC,oBAAoB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC7E,IAAM,IAAI,GAAG,aAAa,CAAC,OAAO,CAAC;IACnC,IAAM,KAAK,GAAG,IAAA,aAAK,GAAE,CAAC;IAEtB,qBAAI,CAAC,GAAG,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;IACvC,qBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;IACpD,qBAAI,CAAC,KAAK,CAAC,MAAM,EAAE,MAAM,EAAE,iBAAM,CAAC,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;IACpD,qBAAI,CAAC,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,WAAW,CAAC,CAAC;IACvD,qBAAI,CAAC,cAAc,CAAC,MAAM,EAAE,IAAI,CAAC,MAAM,CAAC,CAAC;IAEzC,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;IACvB,0BAAW,CAAC,YAAY,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IAC/C,0BAAW,CAAC,mBAAmB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IACtD,OAAO,0BAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AACtC,CAAC;AAED,SAAS,aAAa,CAAC,GAAmB,EAAE,IAAe,EAAE,KAAiB,EAAE,KAAmB;IAC/F,IAAM,IAAI,GAAG,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IAClE,IAAM,IAAI,GAAG,YAAY,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACtC,OAAO,aAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,KAAK,EAAX,CAAW,EAAE,cAAM,OAAA,CAAC,EAAD,CAAC,EAAE,cAAM,OAAA,IAAI,EAAJ,CAAI,CAAC,CAAC;AAClF,CAAC;AAKD,SAAgB,mBAAmB,CAAC,GAA0B,EAAE,SAA6D;IACzH,IAAM,IAAI,GAAG,+BAAc,CAAC,WAAW,CAAC,OAAO,EAAE,GAAG,EAAE,SAAS,EAAE,+BAAc,CAAC,YAAY,EAAE,YAAqE,CAAC,CAAC;IACrK,IAAI,CAAC,QAAQ,CAAC,EAAE,aAAa,EAAE,6BAAa,CAAC,YAAY,EAAE,CAAC,CAAC;IAC7D,OAAO,IAAI,CAAC;AAChB,CAAC;AAJD,kDAIC"}
+{"version":3,"file":"plane.js","sourceRoot":"","sources":["../../../../../src/mol-repr/shape/loci/plane.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAGH,uEAA2E;AAC3E,uDAA2D;AAC3D,oDAAwD;AACxD,uDAAyG;AACzG,kDAAiD;AACjD,4DAA2D;AAC3D,4EAA0E;AAC1E,kDAAyE;AACzE,mEAA8D;AAC9D,iEAAgE;AAChE,0DAAyD;AACzD,0DAAgE;AAChE,uDAAoD;AAMpD,IAAM,YAAY,mDACX,WAAI,CAAC,MAAM,KACd,KAAK,EAAE,kCAAE,CAAC,KAAK,CAAC,kBAAU,CAAC,MAAM,CAAC,EAClC,WAAW,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,GAC/D,CAAC;AAGF,IAAM,YAAY,GAAG;IACjB,OAAO,EAAE,UAAC,GAA0B,EAAE,SAA8D,IAAK,OAAA,IAAA,oCAAmB,EAAC,aAAa,EAAE,WAAI,CAAC,KAAK,CAAC,EAA9C,CAA8C;CAC1J,CAAC;AAEW,QAAA,WAAW,mDACjB,YAAY,KACf,OAAO,EAAE,kCAAE,CAAC,WAAW,CAAC,CAAC,OAAO,CAAC,EAAE,kCAAE,CAAC,eAAe,CAAC,YAAY,CAAC,CAAC,IACtE;AAIF,EAAE;AAEF,SAAS,YAAY,CAAC,KAA8B;IAChD,IAAM,KAAK,GAAG,IAAA,qCAA6B,EAAC,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC,CAAC;IACzE,OAAO,4BAAqB,KAAK,CAAE,CAAC;AACxC,CAAC;AAED,IAAM,MAAM,GAAG,IAAA,qBAAI,GAAE,CAAC;AACtB,IAAM,IAAI,GAAG,IAAA,qBAAI,GAAE,CAAC;AACpB,SAAS,cAAc,CAAC,IAAe,EAAE,KAAiB,EAAE,IAAW;IACnE,IAAM,KAAK,GAAG,0BAAW,CAAC,WAAW,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC;IACtD,IAAM,aAAa,GAAG,4BAAgB,CAAC,IAAI,CAAC,oBAAoB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC7E,IAAM,IAAI,GAAG,aAAa,CAAC,OAAO,CAAC;IACnC,IAAM,KAAK,GAAG,IAAA,aAAK,GAAE,CAAC;IAEtB,qBAAI,CAAC,GAAG,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;IACvC,qBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;IACpD,qBAAI,CAAC,KAAK,CAAC,MAAM,EAAE,MAAM,EAAE,iBAAM,CAAC,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;IACpD,qBAAI,CAAC,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,WAAW,CAAC,CAAC;IACvD,qBAAI,CAAC,cAAc,CAAC,MAAM,EAAE,IAAI,CAAC,MAAM,CAAC,CAAC;IAEzC,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;IACvB,0BAAW,CAAC,YAAY,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IAC/C,0BAAW,CAAC,mBAAmB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IACtD,OAAO,0BAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AACtC,CAAC;AAED,SAAS,aAAa,CAAC,GAAmB,EAAE,IAAe,EAAE,KAAiB,EAAE,KAAmB;IAC/F,IAAM,IAAI,GAAG,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IAClE,IAAM,IAAI,GAAG,YAAY,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACtC,OAAO,aAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,KAAK,EAAX,CAAW,EAAE,cAAM,OAAA,CAAC,EAAD,CAAC,EAAE,cAAM,OAAA,IAAI,EAAJ,CAAI,CAAC,CAAC;AAClF,CAAC;AAKD,SAAgB,mBAAmB,CAAC,GAA0B,EAAE,SAA6D;IACzH,IAAM,IAAI,GAAG,+BAAc,CAAC,WAAW,CAAC,OAAO,EAAE,GAAG,EAAE,SAAS,EAAE,+BAAc,CAAC,YAAY,EAAE,YAAqE,CAAC,CAAC;IACrK,IAAI,CAAC,QAAQ,CAAC,EAAE,aAAa,EAAE,6BAAa,CAAC,YAAY,EAAE,CAAC,CAAC;IAC7D,OAAO,IAAI,CAAC;AAChB,CAAC;AAJD,kDAIC"}

package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts

@@ -14,7 +14,7 @@ interface UnitcellData {
 export declare const UnitcellParams: {
     cellColor: PD.Color;
     cellScale: PD.Numeric;
-    ref: PD.Select<"model" | "origin">;
+    ref: PD.Select<"origin" | "model">;
     attachment: PD.Select<"center" | "corner">;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -22,7 +22,7 @@ export declare const UnitcellParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type UnitcellParams = typeof UnitcellParams;
 export declare type UnitcellProps = PD.Values<UnitcellParams>;

package/lib/commonjs/mol-repr/shape/representation.js

@@ -34,6 +34,7 @@ function ShapeRepresentation(getShape, geometryUtils, builder) {
     var renderObjects = [];
     var _renderObject;
     var _shape;
+    var geometryVersion = -1;
     var _theme = theme_1.Theme.createEmpty();
     var currentProps = param_definition_1.ParamDefinition.getDefaultValues(geometryUtils.Params); // TODO avoid casting
     var currentParams;
@@ -154,6 +155,9 @@ function ShapeRepresentation(getShape, geometryUtils, builder) {
                             geometryUtils.updateRenderableState(_renderObject.state, newProps);
                         }
                         currentProps = newProps;
+                        if (updateState.createGeometry || updateState.createNew) {
+                            geometryVersion += 1;
+                        }
                         // increment version
                         updated.next(version++);
                         return [2 /*return*/];
@@ -177,6 +181,7 @@ function ShapeRepresentation(getShape, geometryUtils, builder) {
         get state() { return _state; },
         get theme() { return _theme; },
         renderObjects: renderObjects,
+        get geometryVersion() { return geometryVersion; },
         updated: updated,
         createOrUpdate: createOrUpdate,
         getLoci: function (pickingId) {

package/lib/commonjs/mol-repr/shape/representation.js.map

@@ -1 +1 @@
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package/lib/commonjs/mol-repr/structure/complex-representation.js

@@ -10,6 +10,7 @@ exports.ComplexRepresentation = void 0;
 var tslib_1 = require("tslib");
 var param_definition_1 = require("../../mol-util/param-definition");
 var representation_1 = require("./representation");
+var representation_2 = require("../representation");
 var structure_1 = require("../../mol-model/structure");
 var rxjs_1 = require("rxjs");
 var render_object_1 = require("../../mol-gl/render-object");
@@ -24,6 +25,7 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
     var version = 0;
     var webgl = ctx.webgl;
     var updated = new rxjs_1.Subject();
+    var geometryState = new representation_2.Representation.GeometryState();
     var materialId = (0, render_object_1.getNextMaterialId)();
     var renderObjects = [];
     var _state = representation_1.StructureRepresentationStateBuilder.create();
@@ -69,10 +71,14 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
                             setState(_state); // current state for new visual
                         // update list of renderObjects
                         renderObjects.length = 0;
-                        if (visual && visual.renderObject)
+                        if (visual && visual.renderObject) {
                             renderObjects.push(visual.renderObject);
+                            geometryState.add(visual.renderObject.id, visual.geometryVersion);
+                        }
+                        geometryState.snapshot();
                         // increment version
-                        updated.next(version++);
+                        version += 1;
+                        updated.next(version);
                         return [2 /*return*/];
                 }
             });
@@ -118,12 +124,12 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
         if (state.overpaint !== undefined && visual) {
             // Remap loci from equivalent structure to the current structure
             var remappedOverpaint = overpaint_1.Overpaint.remap(state.overpaint, _structure);
-            visual.setOverpaint(remappedOverpaint);
+            visual.setOverpaint(remappedOverpaint, webgl);
         }
         if (state.transparency !== undefined && visual) {
             // Remap loci from equivalent structure to the current structure
             var remappedTransparency = transparency_1.Transparency.remap(state.transparency, _structure);
-            visual.setTransparency(remappedTransparency);
+            visual.setTransparency(remappedTransparency, webgl);
         }
         if (state.clipping !== undefined && visual) {
             // Remap loci from equivalent structure to the current structure
@@ -155,6 +161,7 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
         get params() { return _params; },
         get state() { return _state; },
         get theme() { return _theme; },
+        get geometryVersion() { return geometryState.version; },
         renderObjects: renderObjects,
         updated: updated,
         createOrUpdate: createOrUpdate,

package/lib/commonjs/mol-repr/structure/complex-representation.js.map

@@ -1 +1 @@
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package/lib/commonjs/mol-repr/structure/complex-visual.d.ts

@@ -40,7 +40,7 @@ interface ComplexVisualGeometryBuilder<P extends StructureParams, G extends Geom
 }
 export declare function ComplexVisual<G extends Geometry, P extends StructureParams & Geometry.Params<G>>(builder: ComplexVisualGeometryBuilder<P, G>, materialId: number): ComplexVisual<P>;
 export declare const ComplexMeshParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -48,14 +48,14 @@ export declare const ComplexMeshParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type ComplexMeshParams = typeof ComplexMeshParams;
 export interface ComplexMeshVisualBuilder<P extends ComplexMeshParams> extends ComplexVisualBuilder<P, Mesh> {
 }
 export declare function ComplexMeshVisual<P extends ComplexMeshParams>(builder: ComplexMeshVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexCylindersParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
@@ -63,26 +63,26 @@ export declare const ComplexCylindersParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type ComplexCylindersParams = typeof ComplexCylindersParams;
 export interface ComplexCylindersVisualBuilder<P extends ComplexCylindersParams> extends ComplexVisualBuilder<P, Cylinders> {
 }
 export declare function ComplexCylindersVisual<P extends ComplexCylindersParams>(builder: ComplexCylindersVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexLinesParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     lineSizeAttenuation: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type ComplexLinesParams = typeof ComplexLinesParams;
 export interface ComplexLinesVisualBuilder<P extends ComplexLinesParams> extends ComplexVisualBuilder<P, Lines> {
 }
 export declare function ComplexLinesVisual<P extends ComplexLinesParams>(builder: ComplexLinesVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexTextParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     borderWidth: PD.Numeric;
@@ -104,14 +104,14 @@ export declare const ComplexTextParams: {
     fontVariant: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontVariant>;
     fontWeight: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontWeight>;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type ComplexTextParams = typeof ComplexTextParams;
 export interface ComplexTextVisualBuilder<P extends ComplexTextParams> extends ComplexVisualBuilder<P, Text> {
 }
 export declare function ComplexTextVisual<P extends ComplexTextParams>(builder: ComplexTextVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexDirectVolumeParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -137,14 +137,14 @@ export declare const ComplexDirectVolumeParams: {
     stepsPerCell: PD.Numeric;
     jumpLength: PD.Numeric;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type ComplexDirectVolumeParams = typeof ComplexDirectVolumeParams;
 export interface ComplexDirectVolumeVisualBuilder<P extends ComplexDirectVolumeParams> extends ComplexVisualBuilder<P, DirectVolume> {
 }
 export declare function ComplexDirectVolumeVisual<P extends ComplexDirectVolumeParams>(builder: ComplexDirectVolumeVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexTextureMeshParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -152,7 +152,7 @@ export declare const ComplexTextureMeshParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type ComplexTextureMeshParams = typeof ComplexTextureMeshParams;
 export interface ComplexTextureMeshVisualBuilder<P extends ComplexTextureMeshParams> extends ComplexVisualBuilder<P, TextureMesh> {

package/lib/commonjs/mol-repr/structure/complex-visual.js

@@ -51,6 +51,7 @@ function ComplexVisual(builder, materialId) {
     var currentTheme = theme_1.Theme.createEmpty();
     var currentStructure;
     var geometry;
+    var geometryVersion = -1;
     var locationIt;
     var positionIt;
     function prepareUpdate(theme, props, structure) {
@@ -141,8 +142,10 @@ function ComplexVisual(builder, materialId) {
         currentProps = newProps;
         currentTheme = newTheme;
         currentStructure = newStructure;
-        if (newGeometry)
+        if (newGeometry) {
             geometry = newGeometry;
+            geometryVersion += 1;
+        }
     }
     function lociIsSuperset(loci) {
         if ((0, loci_1.isEveryLoci)(loci))
@@ -171,6 +174,7 @@ function ComplexVisual(builder, materialId) {
     return {
         get groupCount() { return locationIt ? locationIt.count : 0; },
         get renderObject() { return locationIt && locationIt.count ? renderObject : undefined; },
+        get geometryVersion() { return geometryVersion; },
         createOrUpdate: function (ctx, theme, props, structure) {
             if (props === void 0) { props = {}; }
             prepareUpdate(theme, props, structure || currentStructure);
@@ -210,11 +214,13 @@ function ComplexVisual(builder, materialId) {
         setTransform: function (matrix, instanceMatrices) {
             visual_1.Visual.setTransform(renderObject, matrix, instanceMatrices);
         },
-        setOverpaint: function (overpaint) {
-            visual_1.Visual.setOverpaint(renderObject, overpaint, lociApply, true);
+        setOverpaint: function (overpaint, webgl) {
+            var smoothing = { geometry: geometry, props: currentProps, webgl: webgl };
+            visual_1.Visual.setOverpaint(renderObject, overpaint, lociApply, true, smoothing);
         },
-        setTransparency: function (transparency) {
-            visual_1.Visual.setTransparency(renderObject, transparency, lociApply, true);
+        setTransparency: function (transparency, webgl) {
+            var smoothing = { geometry: geometry, props: currentProps, webgl: webgl };
+            visual_1.Visual.setTransparency(renderObject, transparency, lociApply, true, smoothing);
         },
         setClipping: function (clipping) {
             visual_1.Visual.setClipping(renderObject, clipping, lociApply, true);

package/lib/commonjs/mol-repr/structure/complex-visual.js.map

@@ -1 +1 @@
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package/lib/commonjs/mol-repr/structure/params.d.ts

@@ -6,9 +6,9 @@
  */
 import { ParamDefinition as PD } from '../../mol-util/param-definition';
 import { UnitKind } from './visual/util/common';
-export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
 export declare const StructureParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
 };
 export declare type StructureParams = typeof StructureParams;
@@ -19,7 +19,7 @@ export declare const StructureMeshParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureMeshParams = typeof StructureMeshParams;
 export declare const StructureSpheresParams: {
@@ -28,7 +28,7 @@ export declare const StructureSpheresParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureSpheresParams = typeof StructureSpheresParams;
 export declare const StructureCylindersParams: {
@@ -38,22 +38,22 @@ export declare const StructureCylindersParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureCylindersParams = typeof StructureCylindersParams;
 export declare const StructurePointsParams: {
     sizeFactor: PD.Numeric;
     pointSizeAttenuation: PD.BooleanParam;
-    pointStyle: PD.Select<"square" | "circle" | "fuzzy">;
+    pointStyle: PD.Select<"circle" | "square" | "fuzzy">;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructurePointsParams = typeof StructurePointsParams;
 export declare const StructureLinesParams: {
     sizeFactor: PD.Numeric;
     lineSizeAttenuation: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureLinesParams = typeof StructureLinesParams;
 export declare const StructureTextParams: {
@@ -77,7 +77,7 @@ export declare const StructureTextParams: {
     fontVariant: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontVariant>;
     fontWeight: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontWeight>;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureTextParams = typeof StructureTextParams;
 export declare const StructureDirectVolumeParams: {
@@ -105,7 +105,7 @@ export declare const StructureDirectVolumeParams: {
     stepsPerCell: PD.Numeric;
     jumpLength: PD.Numeric;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureDirectVolumeParams = typeof StructureDirectVolumeParams;
 export declare const StructureTextureMeshParams: {
@@ -115,6 +115,6 @@ export declare const StructureTextureMeshParams: {
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
     alpha: PD.Numeric;
-    quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
+    quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
 };
 export declare type StructureTextureMeshParams = typeof StructureTextureMeshParams;