RubyGems - rubyneat - Versions diffs - 0.3.5.alpha.3 → 0.3.5.alpha.5 - Mend

rubyneat 0.3.5.alpha.3 → 0.3.5.alpha.5

Files changed (252) hide show

checksums.yaml +4 -4
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data/{neater/xor_neat.rb → lib/rubyneat/cli/templates/generate/neater.tt} +7 -22
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data/doc/NEAT/BasicNeuronTypes.html DELETED Viewed

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-<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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-<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
-  <head>
-    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-<title>
-  Module: NEAT::BasicNeuronTypes
-    &mdash; Documentation by YARD 0.8.7.4
-</title>
-  <link rel="stylesheet" href="../css/style.css" type="text/css" charset="utf-8" />
-  <link rel="stylesheet" href="../css/common.css" type="text/css" charset="utf-8" />
-<script type="text/javascript" charset="utf-8">
-  hasFrames = window.top.frames.main ? true : false;
-  relpath = '../';
-  framesUrl = "../frames.html#!NEAT/BasicNeuronTypes.html";
-</script>
-  <script type="text/javascript" charset="utf-8" src="../js/jquery.js"></script>
-  <script type="text/javascript" charset="utf-8" src="../js/app.js"></script>
-  </head>
-  <body>
-    <div id="header">
-      <div id="menu">
-    <a href="../_index.html">Index (B)</a> &raquo;
-    <span class='title'><span class='object_link'><a href="../NEAT.html" title="NEAT (module)">NEAT</a></span></span>
-     &raquo;
-    <span class="title">BasicNeuronTypes</span>
-  <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
-</div>
-      <div id="search">
-    <a class="full_list_link" id="class_list_link"
-        href="../class_list.html">
-      Class List
-    </a>
-    <a class="full_list_link" id="method_list_link"
-        href="../method_list.html">
-      Method List
-    </a>
-    <a class="full_list_link" id="file_list_link"
-        href="../file_list.html">
-      File List
-    </a>
-</div>
-      <div class="clear"></div>
-    </div>
-    <iframe id="search_frame"></iframe>
-    <div id="content"><h1>Module: NEAT::BasicNeuronTypes
-</h1>
-<dl class="box">
-    <dt class="r1">Included in:</dt>
-    <dd class="r1"><span class='object_link'><a href="DSL.html" title="NEAT::DSL (module)">DSL</a></span></dd>
-    <dt class="r2 last">Defined in:</dt>
-    <dd class="r2 last">lib/rubyneat/neuron.rb</dd>
-</dl>
-<div class="clear"></div>
-<h2>Overview</h2><div class="docstring">
-  <div class="discussion">
-<h1 id="label-Basic+Neuron+Types">Basic Neuron Types</h1>
-<p>Basically, the neurons (nodes) will have an instantiation to represent
-their places in the neural net, and way to spin up the phenotypic
-representation.</p>
-<p>The basic types to RubyNEAT are represented here.</p>
-  </div>
-</div>
-<div class="tags">
-</div><h2>Defined Under Namespace</h2>
-<p class="children">
-      <strong class="classes">Classes:</strong> <span class='object_link'><a href="BasicNeuronTypes/BiasNeuron.html" title="NEAT::BasicNeuronTypes::BiasNeuron (class)">BiasNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/CosineNeuron.html" title="NEAT::BasicNeuronTypes::CosineNeuron (class)">CosineNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/InputNeuron.html" title="NEAT::BasicNeuronTypes::InputNeuron (class)">InputNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/SigmoidNeuron.html" title="NEAT::BasicNeuronTypes::SigmoidNeuron (class)">SigmoidNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/SineNeuron.html" title="NEAT::BasicNeuronTypes::SineNeuron (class)">SineNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/TanhNeuron.html" title="NEAT::BasicNeuronTypes::TanhNeuron (class)">TanhNeuron</a></span>
-</p>
-</div>
-    <div id="footer">
-  Generated on Sun Apr 13 15:54:02 2014 by
-  <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.7.4 (ruby-2.1.1).
-</div>
-  </body>
-</html>

data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html DELETED Viewed

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-  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
-<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
-  <head>
-    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-<title>
-  Class: NEAT::BasicNeuronTypes::BiasNeuron
-    &mdash; Documentation by YARD 0.8.7.4
-</title>
-  <link rel="stylesheet" href="../../css/style.css" type="text/css" charset="utf-8" />
-  <link rel="stylesheet" href="../../css/common.css" type="text/css" charset="utf-8" />
-<script type="text/javascript" charset="utf-8">
-  hasFrames = window.top.frames.main ? true : false;
-  relpath = '../../';
-  framesUrl = "../../frames.html#!NEAT/BasicNeuronTypes/BiasNeuron.html";
-</script>
-  <script type="text/javascript" charset="utf-8" src="../../js/jquery.js"></script>
-  <script type="text/javascript" charset="utf-8" src="../../js/app.js"></script>
-  </head>
-  <body>
-    <div id="header">
-      <div id="menu">
-    <a href="../../_index.html">Index (B)</a> &raquo;
-    <span class='title'><span class='object_link'><a href="../../NEAT.html" title="NEAT (module)">NEAT</a></span></span> &raquo; <span class='title'><span class='object_link'><a href="../BasicNeuronTypes.html" title="NEAT::BasicNeuronTypes (module)">BasicNeuronTypes</a></span></span>
-     &raquo;
-    <span class="title">BiasNeuron</span>
-  <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
-</div>
-      <div id="search">
-    <a class="full_list_link" id="class_list_link"
-        href="../../class_list.html">
-      Class List
-    </a>
-    <a class="full_list_link" id="method_list_link"
-        href="../../method_list.html">
-      Method List
-    </a>
-    <a class="full_list_link" id="file_list_link"
-        href="../../file_list.html">
-      File List
-    </a>
-</div>
-      <div class="clear"></div>
-    </div>
-    <iframe id="search_frame"></iframe>
-    <div id="content"><h1>Class: NEAT::BasicNeuronTypes::BiasNeuron
-</h1>
-<dl class="box">
-    <dt class="r1">Inherits:</dt>
-    <dd class="r1">
-      <span class="inheritName"><span class='object_link'><a href="InputNeuron.html" title="NEAT::BasicNeuronTypes::InputNeuron (class)">InputNeuron</a></span></span>
-        <ul class="fullTree">
-          <li>Object</li>
-            <li class="next"><span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></li>
-            <li class="next"><span class='object_link'><a href="../Neuron.html" title="NEAT::Neuron (class)">Neuron</a></span></li>
-            <li class="next"><span class='object_link'><a href="InputNeuron.html" title="NEAT::BasicNeuronTypes::InputNeuron (class)">InputNeuron</a></span></li>
-            <li class="next">NEAT::BasicNeuronTypes::BiasNeuron</li>
-        </ul>
-        <a href="#" class="inheritanceTree">show all</a>
-      </dd>
-    <dt class="r2 last">Defined in:</dt>
-    <dd class="r2 last">lib/rubyneat/neuron.rb</dd>
-</dl>
-<div class="clear"></div>
-<h2>Overview</h2><div class="docstring">
-  <div class="discussion">
-<h1 id="label-Special+class+of+neuron+that+provides+a+bias+signal.">Special class of neuron that provides a bias signal.</h1>
-<p>FIXME: The bias value is not behaving as expected because FIXME: the
-instance is not the neuron, but the phenotype.</p>
-  </div>
-</div>
-<div class="tags">
-</div>
-  <h2>Instance Attribute Summary <small>(<a href="#" class="summary_toggle">collapse</a>)</small></h2>
-  <ul class="summary">
-      <li class="public ">
-  <span class="summary_signature">
-      <a href="#neu_bias-instance_method" title="#neu_bias (instance method)">- (Object) <strong>neu_bias</strong> </a>
-  </span>
-    <span class="summary_desc"><div class='inline'>
-<p>Returns the value of attribute neu_bias.</p>
-</div></span>
-</li>
-  </ul>
-  <h3 class="inherited">Attributes inherited from <span class='object_link'><a href="../Neuron.html" title="NEAT::Neuron (class)">Neuron</a></span></h3>
-  <p class="inherited"><span class='object_link'><a href="../Neuron.html#genotype-instance_method" title="NEAT::Neuron#genotype (method)">#genotype</a></span>, <span class='object_link'><a href="../Neuron.html#heirarchy_number-instance_method" title="NEAT::Neuron#heirarchy_number (method)">#heirarchy_number</a></span>, <span class='object_link'><a href="../Neuron.html#output-instance_method" title="NEAT::Neuron#output (method)">#output</a></span>, <span class='object_link'><a href="../Neuron.html#trait-instance_method" title="NEAT::Neuron#trait (method)">#trait</a></span></p>
-  <h3 class="inherited">Attributes inherited from <span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></h3>
-  <p class="inherited"><span class='object_link'><a href="../NeatOb.html#controller-instance_method" title="NEAT::NeatOb#controller (method)">#controller</a></span>, <span class='object_link'><a href="../NeatOb.html#name-instance_method" title="NEAT::NeatOb#name (method)">#name</a></span></p>
-    <h2>
-      Class Method Summary
-      <small>(<a href="#" class="summary_toggle">collapse</a>)</small>
-    </h2>
-    <ul class="summary">
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#bias%3F-class_method" title="bias? (class method)">+ (Boolean) <strong>bias?</strong> </a>
-  </span>
-    <span class="summary_desc"><div class='inline'></div></span>
-</li>
-    </ul>
-    <h2>
-      Instance Method Summary
-      <small>(<a href="#" class="summary_toggle">collapse</a>)</small>
-    </h2>
-    <ul class="summary">
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#express-instance_method" title="#express (instance method)">- (Object) <strong>express</strong>(instance) </a>
-  </span>
-    <span class="summary_desc"><div class='inline'>
-<p>Just provides a bias signal FIXME: we had to hard-code the value here for
-now.</p>
-</div></span>
-</li>
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#initialize-instance_method" title="#initialize (instance method)">- (BiasNeuron) <strong>initialize</strong>(c = nil, n = nil) </a>
-  </span>
-    <span class="note title constructor">constructor</span>
-    <span class="summary_desc"><div class='inline'>
-<p>A new instance of BiasNeuron.</p>
-</div></span>
-</li>
-    </ul>
-  <h3 class="inherited">Methods inherited from <span class='object_link'><a href="InputNeuron.html" title="NEAT::BasicNeuronTypes::InputNeuron (class)">InputNeuron</a></span></h3>
-  <p class="inherited"><span class='object_link'><a href="InputNeuron.html#input%3F-class_method" title="NEAT::BasicNeuronTypes::InputNeuron.input? (method)">input?</a></span></p>
-  <h3 class="inherited">Methods inherited from <span class='object_link'><a href="../Neuron.html" title="NEAT::Neuron (class)">Neuron</a></span></h3>
-  <p class="inherited"><span class='object_link'><a href="../Neuron.html#bias%3F-instance_method" title="NEAT::Neuron#bias? (method)">#bias?</a></span>, <span class='object_link'><a href="../Neuron.html#inherited-class_method" title="NEAT::Neuron.inherited (method)">inherited</a></span>, <span class='object_link'><a href="../Neuron.html#input%3F-instance_method" title="NEAT::Neuron#input? (method)">#input?</a></span>, <span class='object_link'><a href="../Neuron.html#input%3F-class_method" title="NEAT::Neuron.input? (method)">input?</a></span>, <span class='object_link'><a href="../Neuron.html#neuron_types-class_method" title="NEAT::Neuron.neuron_types (method)">neuron_types</a></span>, <span class='object_link'><a href="../Neuron.html#output%3F-instance_method" title="NEAT::Neuron#output? (method)">#output?</a></span></p>
-  <h3 class="inherited">Methods included from <span class='object_link'><a href="../Graph.html" title="NEAT::Graph (module)">Graph</a></span></h3>
-  <p class="inherited"><span class='object_link'><a href="../Graph.html#%3C%3C-instance_method" title="NEAT::Graph#&lt;&lt; (method)">#<<</a></span>, <span class='object_link'><a href="../Graph.html#add-instance_method" title="NEAT::Graph#add (method)">#add</a></span>, <span class='object_link'><a href="../Graph.html#clear_graph-instance_method" title="NEAT::Graph#clear_graph (method)">#clear_graph</a></span>, <span class='object_link'><a href="../Graph.html#inputs-instance_method" title="NEAT::Graph#inputs (method)">#inputs</a></span></p>
-  <h3 class="inherited">Methods inherited from <span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></h3>
-  <p class="inherited"><span class='object_link'><a href="../NeatOb.html#log-instance_method" title="NEAT::NeatOb#log (method)">#log</a></span>, <span class='object_link'><a href="../NeatOb.html#log-class_method" title="NEAT::NeatOb.log (method)">log</a></span>, <span class='object_link'><a href="../NeatOb.html#to_s-instance_method" title="NEAT::NeatOb#to_s (method)">#to_s</a></span></p>
-  <div id="constructor_details" class="method_details_list">
-  <h2>Constructor Details</h2>
-    <div class="method_details first">
-  <h3 class="signature first" id="initialize-instance_method">
-    - (<tt><span class='object_link'><a href="" title="NEAT::BasicNeuronTypes::BiasNeuron (class)">BiasNeuron</a></span></tt>) <strong>initialize</strong>(c = nil, n = nil)
-</h3><div class="docstring">
-  <div class="discussion">
-<p>Returns a new instance of BiasNeuron</p>
-  </div>
-</div>
-<div class="tags">
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-93
-94
-95
-96</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 93</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span><span class='lparen'>(</span><span class='id identifier rubyid_c'>c</span><span class='op'>=</span><span class='kw'>nil</span><span class='comma'>,</span> <span class='id identifier rubyid_n'>n</span><span class='op'>=</span><span class='kw'>nil</span><span class='rparen'>)</span>
-  <span class='kw'>super</span>
-  <span class='ivar'>@neu_bias</span> <span class='op'>=</span> <span class='float'>1.00</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-</div>
-  <div id="instance_attr_details" class="attr_details">
-    <h2>Instance Attribute Details</h2>
-      <span id="neu_bias=-instance_method"></span>
-      <div class="method_details first">
-  <h3 class="signature first" id="neu_bias-instance_method">
-    - (<tt>Object</tt>) <strong>neu_bias</strong>
-</h3><div class="docstring">
-  <div class="discussion">
-<p>Returns the value of attribute neu_bias</p>
-  </div>
-</div>
-<div class="tags">
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-91
-92
-93</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 91</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_neu_bias'>neu_bias</span>
-  <span class='ivar'>@neu_bias</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-  </div>
-  <div id="class_method_details" class="method_details_list">
-    <h2>Class Method Details</h2>
-      <div class="method_details first">
-  <h3 class="signature first" id="bias?-class_method">
-    + (<tt>Boolean</tt>) <strong>bias?</strong>
-</h3><div class="docstring">
-  <div class="discussion">
-  </div>
-</div>
-<div class="tags">
-<p class="tag_title">Returns:</p>
-<ul class="return">
-    <li>
-        <span class='type'>(<tt>Boolean</tt>)</span>
-    </li>
-</ul>
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-90</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 90</span>
-<span class='kw'>def</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_bias?'>bias?</span> <span class='semicolon'>;</span> <span class='kw'>true</span> <span class='semicolon'>;</span> <span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-  </div>
-  <div id="instance_method_details" class="method_details_list">
-    <h2>Instance Method Details</h2>
-      <div class="method_details first">
-  <h3 class="signature first" id="express-instance_method">
-    - (<tt>Object</tt>) <strong>express</strong>(instance)
-</h3><div class="docstring">
-  <div class="discussion">
-<p>Just provides a bias signal FIXME: we had to hard-code the value here for
-now. Not a biggie, FIXME: but really should be @neu_bias</p>
-  </div>
-</div>
-<div class="tags">
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-101
-102
-103</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 101</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_express'>express</span><span class='lparen'>(</span><span class='id identifier rubyid_instance'>instance</span><span class='rparen'>)</span>
-  <span class='id identifier rubyid_instance'>instance</span><span class='period'>.</span><span class='id identifier rubyid_define_singleton_method'>define_singleton_method</span><span class='lparen'>(</span><span class='ivar'>@name</span><span class='rparen'>)</span> <span class='lbrace'>{</span> <span class='float'>1.00</span> <span class='rbrace'>}</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-  </div>
-</div>
-    <div id="footer">
-  Generated on Sun Apr 13 15:54:02 2014 by
-  <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.7.4 (ruby-2.1.1).
-</div>
-  </body>
-</html>